Cmc03g0059891 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc03g0059891
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	50S ribosomal protein L18-like
Location	CMiso1.1chr03: 92335 .. 102137 (-)
RNA-Seq Expression	Cmc03g0059891
Synteny	Cmc03g0059891

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCATGAGGAGATGACTTTTTAACGCTCGGCCGTTCATCTTGGTAACTGCACTCGAATTTCTCCTCAATCCAGGTAAAGGTAAAAAAGCGGACAAATATCATTAGGCCTCACTTCCACCAAAAAGTCGCGGGTGGACGAATGACCTGAATTTGAACGATGGCCTTCACAGCAATAGCTTCTTCACTGCCATCTTGTTCTTCTGTGTTCTCCTCCCAGGGGCCATCAACTCCATTACAGAAATCCTCGTCTCTATCGTGGGCATCTTCTTTTCCGCATGTTAACATATTCAGAGGCTCTCCTTTCGCCTCTTCTAAACCCCCGTATGCCAAGGTACAATTTCTTCACTGCCATCCTACTTCATTCCCTACTATTCGGGAGGATATCTTAGTTACATTTTGAAGTTTGTGATTTATCGATTGTGGAGCACGAATTTCTCTATTGTTGTTCACTTTTGTTGGGAGAAGCAGAATTATATGCGACAAAGGTTAATCTGTGGTTGGTTTGCTGCTAATTGTGTATTCAAGCCAATAGTCAATATGAACTCAACCATATCGCAACTTTCCTTGAACTTGCTGCATAGTAAAGGAGAGAAAGAATTGCGTGATAATTTATAAAAAATTATCATGATAACTTTTCAGGATATGTTTTTAGAATTTAAAAGGAATACTGCGTGCAATCATTTTCTGAGAATAGTCTTGCTGTTATTATGGATGGAAAAGACGGAAATGACCGTTCCATGGAATACAAAGTTCTCAACTATTTTCTGCTTCGTTCCAGGTCAAATGATTTCATTGCTATTGTTGAGTAGTGTCCCAGTTCCACTTCTTTCAAATACTTCGTTTTCAACCTTCTATTTTCGTTGGGTGTGAAATTGCGAACATTTTGAACTTAGAAATTTGCCTTATAAATGTGTTAGCGCCCATGGTTCCTGTAACAATAATACCAGCACACACAAAAACTAACAGCTAACACAACACAAGAACACTTATCACACTACACTCTAAAACAATATGAGTCAATCTGGAACTTATATATTTATATAGGAATGATCATTCAATACAAAAGGTTACCACAAAATGATTACAGCCAAATGAGAGGGTTGTTCTCTCCCAAATGAACAAGGATGTCCATTCAAAACATTCCAAACATTCCAATGCCTAACCCTAGCTAAACGTCCCCCTATATATAAACTCTCTTTGCTGCTTCCACGTGCCCCAGGGACCACTGGCCATTCCAACTACCATTTTGTCTATGCTGAAATAGCTTTCTTACCCTTCTTCCTCTTTCTATGATAAACTTGGGTAATTGGGGGCCTAGCAATACCCCCATGGAGAAGAGCCACCTTGTCCTCAAGGTGGAAATCAGGGAATTGGTTCACGAGTGTTGCATAGGATTCCCATGTGGCTTCATGACTCGGTTGATCTTTCCAATGAACCAAGTACTCCCAGTTCCTCTCGGCATCATTCCAGCAGAGTTGTGTCACTTGGTCGGGCTCCAAAACTAGCTCCATCTGATCATTAAGCGTAGATATGTCCGGTTGGATACGGTGTTTGTCACCCACTGCCCTTTTTAATTGCGAAACATGAAAAATTGGGTGTATTTTGGCATTTTCCGGAAGGTCCAACAAGTAGGCTACCTCGCCGACTCTTCCCAACACCATATAAGGTCGAAGTATTTAGGGGATAGCTTATCACAGCGCCTCTTAGCGACCGATTGCTGCCTCTAGGGTTGTAATTTCAAATATATCCAATCTCTAATGTCAAAAACTACTTCCCTTTGGTGTACATCTGCAAACTTCTTCATTTGTTCCTGGGCATGTTGTAAATGTTGCTTCAAAACTGCTAGTATTTCATCTCTATTCTGTAACTGGTATTCGACCGAATCATTCGGTGTTGTGCTCACCTGACCGTAGGAGATAACGGGGGGTGGAGGCTGTCCATAAACCACCGCGTAGGGGGTCATCTTGATCGATGCATGATAGTTGGTGTTATACCAATATTCGGCCCATGCTAGCTTTTCACTCCACGTTTTGGGTCGATCTTGACACAAACATCGTAAATATAGTTTGATGCACTTGTTAACGACTTCTGTTTGTTCGTCGGTTTGAGGATGATACGCCGTACTTCTTTCAATTGGGTCCCTTGTAAGCGGAATAATTCTTTCCAAAAATGGCTTAAAAACAGTTGGTCGCGATTGGATACTATTGATCGAGGGTATCCGTGGAGGCGCACTATCTCCTTAATAAATTCCACAACCACTGTTTTGGCGGAAAATGGATGACTCAAAGCGATGAAGTGTGCGTATTTACTCAATCGATCCACCACTACTAACACCGAGTTGAACGTCCTGGATCGTGGGAGGCCTTCCACAAAGTCCATCGATATATCTTCCCAAATTCGGTTAGGAATGGGTAGGGGCTGCAGCAGGCCGGCTGGCGATAAGGCTTGAGTTTTATTCTGTTGACACACATGACATTGATCCACGTAGAGCTTGATGTCGTTCTTCATTCCCTCCCAATATAATTCAGCCGCGATTCGTTTGTAGGTACGTAGTTGCCCCGAGTGTCCCCCAACCACAGAGTCATGGAAAGTGTGTAAAATGGTTGGTAATAAACTGGATGTCTTCGGGAGGACTAATCTGCCCTGATAAAACAACTGGCCTCGTCGGACTGAATACTGCGGCACACTCCCGGGGTCCTCTAATAGTTTCTCGAATATGCCCTTGAGCTTGTCATCTGCTTGGACCTCTTTTTCCACCACAACGTCATCAAGTATGGAAGGGACCGTAATAATATTCAGCTAGGCCTCAATCGGGATGCGGGATAATGCATCAGCAGCCTTGTTTTCTGGTCCCGCTCGGTAAAAGATCTCAAAATCAAAACCCATGAGTTTCATCAACCATTTATGTATTCCCGATATCAGTTCCCGCTGTTCCAGTATGTGTCTCAAGGCTTTCTGATCGGTGTACACCACGAAATGATGCCCCAACAAATAATGTCACCATTTTTCTACTACTAACATAATGGCCATTAGCTTTCTCTCGTAGACTGATTTCTCTCTCGCCGCTTCTGACAACTTTTGGCTGAAGTAAGCAATTGGTCTTTTGTTCTGTGATAATACCGCTCCCAACCTAAACCCGGAAGCGTCTATCTCTATCTCAAACGGTTGCTGGAAATCCGGTAAGGCCAAGACAGGCAGTGTAACCATGGCCGTTTTCAGCTTTTCGAATGCCACCTTGGCCTCCGCTGACGAATGGAAGTTATTCTTCTTCGTCAAACGGGTGAGGGGCATGGCTATGGCTCCGTAGTTTGCCACAAATCGGCGGTAATATCCGGTCAGTCCCAGAAATCCTCTAAGCTCCCTCACGTTCTTTGGAATCGGCCATTCCAACATTATTCTGATCTTTTCTTGGTCTGCTTCAACCCCCTTTTCAGACACCCAATGCCCCAAATACTCGATGCGTTCCTTCCCGAAATGGCACTTCTTGCGGTTGGCAAAAAGGCTATGCTCCCTTAGTAGGCTAAACACCAACGTGAGGTGCTCCAAGTGAGATTCTGCATCTTTACTATACACAAGGATATCATCAAAAAACACCAGTATAAACTTACGTAAATAAGGTCGGAAAACTTGGTTCATAAGGGCTTGGAATGTCACTGGTGCGTTTGTGAGCCCAAATGGCATGACCAGAAATTCGTAATGCCCCTCGTGCATTCTAAAAGCCGTTTTCTTTACGTCCTCCTCTCGCACTCGGATCTGATGGTACCCCGACTTCAAATCGATTTTGGAAAAAATACTGGCCCCGTGCAGCTCATCCACCAGCTCGTCAATCATGGGGATTGGGAACTTATCGGGTACTGTCGCTCTATTCAACGCCCTATAGTCCACGCAAAACCGCCAACCGCTGTCTTTCTTTTTCACATGGATCACTGGGCTGGAAAATGGGCTGACACTCGGTCGAATAATTCCCGAGTCGAGCATCTCATTCATTAATTTCTCAATTTCGTTCTTCTGAACATGGGGGTAACGGTATGGCCGAACGTTAATGGGGTCCGTACCTTCCTTCAGTTGTATGCGGTGGTCAACTTGTCTCACTGGGGGTAATTCTGAGGGCATATCGAATACATCTACAAATTCCCGCTCAAGCTGTTCAAATTTCGGTCGTAGCTCTTCCACCGCTACACTAACAGTCAGTTGCCAGTCCGCCCTCGATACACCCATGGACCTGAAATCCACGAGAAATCCCCGATCCTCGGGCTGCTATTGCTTCATCAACATCTTCAGGAACACTTCCATTCTTGTTAACGACGGGTCCCCCTTCAGCACTACTTTAGTACCCCCGACGAAGAACGTCATTGCTAAATCCTTCCAATCTGCTGTCATCGCTCCTTGCTTTTGCAACGACTGAATTCTAAGAACCATATCTAAATTTCCCAGTTCCAACGGCAAGAAATCATCCACTACTGTTAACCCGGGCAGCCCCACGATCACACCCGTGCACATCCCTTTTCCTTGGACTGCCTTGCCAGATCCCATGATGACCCCATAGTTGGTCGTCTCTGTTGTCGGAACTTTTAACTCCTCCACCAGCTTTAAGGAGATGAAATTATGTGTGGCCCCACAATCGATCATCACCACAACTTCCCGTTCTTCCACTTTTCCTTTAATCTTGAACGTACCCGGAGCCGTGAGGCCAACCACTGAGTTCAGAGACAAGTCGACGATGGGACTAACCTCCACCATTCCTTCTTCGATTTCCATCTCACCCATTTCTGCGTCGTCCAAGTCGTCAGCTACCACAAATAGATGAAGCTTCTTGTTCTTGCAGCGGTGGCCTTTGCTGAACGGTTCGTCACACCGATAGCATAAACCCTTCTCTTTCCTCGCCTGTAGCTCAGAGTCGGTCCACCGTCGATAGGGATGTTCGTGTCGACCTCCCCCTCCTACGGCATTAGGTTGAACTGTGTTTGAATTTGACGGATGAGGGAGAACTTTTTCCGCGAAGGTCACCATCTTCGTGGTCGGGCTTTCCTAAATTTTTGGGCTCAGTTTTGGGTTTGTTTTCGCGGTCTCCTTCGGGTACGGGTATGGGCCCCCCTTTGCTACTTCAATCTTTTCTTCTGCGAGTTCGGCCGCCTCTATCATATCTTCCAGGCCCACGGCCCTCATGGAGAATACCTCCTTTCTAATTATTGGGTCCAGACCGTTAGTGAATGTTCCCTCCAAAACCTCTTCTGCAATTTCCGGTAGGGGCGCCGATAGTTCTTCAAACCTTTGCAGATATTCACTCACCGAACCTTCCTGCTTGATCGCCAAAAATTTTGCACACACCGTTCTGTGTTCTCTACTCCGGGATCGATTATACATTCTTTCTTTCAACTCCTTCCAGGATCTGAACCGTTTACGGTTTTCTGCCCATTTAAACCAGCTCAATCCCTTCCCTTCCAAGCTAACCACAACGATCTTCAGTTTTTTCCGTTCGTTCAAGAGATGCATTTGGAAGTAGTGCTCCGCCCTGTAGAACCATCCATCCGGATCCTCCCCGTTAAAAACTGGCATTTCTAATTTCTTGAACTTGATCCTATCCTGTCCTACCCCTGTTTCCACACTCAAGGACGTCTCCCCTTCTTCCCCCTCCACACTCAAGGACGTCTCCCCTTCTTCCCCCTCCTCTTCGGCCGTATCTTTATTCCTGAGTTTCCTCTTCCCGGTGCTTATCCCAGTCATTTCCGAACCTCTCAGTTGCCTCTGGTGGTCCTCGTAAATTGCAGATAACATGGCGTGCACCTTCTCTAAATTTTTCTCTAGGAGCGGTAGTCTCTGGACCTCTTGTTTAATCGCCTCGATCTCTGCTTCTGAAGCGGTTAAACGATCCTCTATCATCTTTTGCGTCATCTTCTTCCACCTCCTCAGATTGTCGACTCGCTCTGATACCAATGTTAGCGCCCGTGGTTCCTGTAACAATAATACCAACACACAGACACAAACTAACAGCTAACACAGCACAAGAACACTTATCACACTACACTCTAAAACAATATGAGACAATCTGGAACTTATATATTTATATAGGAATGATCATTCAATACAAAAGGTTACCACAAAATGATTACAACCAAATGAGAGGGTTGTTCTCTCCCAAGTGAACAAGGATGTTCATTCAAAACATTCCAAACATTCCAAGGCCTAACCCTAGCTAAACGTCCCCCTATATATAAACTCCCTTTGCTGCTGCCACGTGCCCCAGGGACCACTGGCCATTCCAACTACCATTTTGTCTATGCTGAAATGGCTTTCTTACCCTTCTTCCTCTTTCTATGATAAACTTGGGTAATTGAGAGCCTAGCAAAATGGCAGCCAACCTTTTGAACCCAGGACCATTTAGTTAAGTCTGCAAGAAGTTTTCTCTACGTTAACATCCTTGGACTCAGCTAGGCTGCATTAACAATTTTCCAACTTGAAATGTGGAATATTCAGGAAGATTTGCATTGAACTAAGTGTAATACCAGCTTTATTGAAGAAGAGGAAGAGAGAACCCCCTTTCGGACCACATACCAATGTTTACACAACTCATAGTCAAACCCTATACGACCCATAACTAACACCACTGAACCCAATACTTATTTACAGACAAGAAAAACACAACTAAAACAGCACATACTAGTATGAAACTCAAGATAAACTAGCAGATAGCGGATGAGGTCAGGCGTCAGGTCCACGATCTCCACTTGGAAAGTAAGAAAACATTTTTGGAAAGGGTAAGCTAAATCTCAATGAGTGACCAGTTTTAAAACAAATTTGCTTTAACAAAACAATGAGTAGTAAAATGAACTAGCATAAAACATACAACACAGGAATATAAACAACTTAGATTGATTCAAAAAAATCAATGGATGAGTCCTATACCCGCTATGAGATTGAAACACGTTCAAGAATCTAACAAAATGACAACTTAGATCCCATAGCATTGGAGGAAATAAAGAAAACAATAAAAGAAATTCAACGTTGAAATGACTCAACATATCAATCAACTATCAATTCATCTGCAAGAGTTCAAGAACGGATTGGTTTCATATACAAAAGAAAAAACAAAGGAATCACGGTTGGAAAATTTTCAAATAGAAAATCTTGAAGATAAAATTGAAGAACAAGAATTTGAAAATGTTGATTTAGAAATGGTCACAAGTGAAGAAAAATCCAACAAAGAAGATGAAAAAGAAGTATCGAACACCGAGCAAAAATCGAACAAGAACGACATATTGGTTGTGGTGGAAATGATCTTCAAACCGTCGAAGAACTTGAAGCGAATGATAAAGAAAATGTGATTCTTGAAGGATTTTCTTTGAGAGCTAATTCTTTGAATACGGTTTTGAGTGAGATTGAGGAAACATCTTTTTCAGGTTTACGGCTGATGGAGAGATTCATCTTTTAGTGTCCATAATTGATTTTCTGTCTCGATTTTATCCCTTCGATCATAATATTTTGGTTTAAAACGTAGGAGGTTGATTTGGTCATACTCCGTTGAACAAGTTTATTTCATTCTTTTTTTCCTTTTTTTGCTTCATAAGTTTCTTCTTTTTAAAACTCGGGATGAGTTTTCTTTTTGGAGGGGTTGAATGATGTAAGAAGACTAAGGGTTAATTGGGTAATTAGGTAATATTCTAGGTTAATATCCCTTTTTACCCCCAATTATAATAGAACTTTATAAATAAGAGACTTCTTCTCTTGTATAAAACATATTATTCATTCTAATAAAAAATTCACAACCTTAGTTCTTGGAGGATTTCTTTTTGAGGTTACTTAGGCTACATCAAATAAATAGTTATCTAACGTAGTTCTTGCAGTCTTTATCAATGGACCAGCTGAGATTAAAGGTGTGAAAGAGGTTACTCCAACACTTGGCAACATAAAAGCAATCGAATAATATGTGCTGTAGGTCCTCATGAGATATAAGACAAAATGGACAAATATATGGCGAAATATAATGAGTGGGTAGTTTTCTTTTGGATAACTGAAGTACAATTTAAACTCCCCGACAACATAACCCATATGGTTATATTCACCCTCCATGAACTTTTAGATTTCCAAAGGCATTTTTCCAGCTGTGGGTCCAACGGGGAGGCAGGAGTCAAGTGCTCCCCGTCAAGTGTTTTGATAGTGACTTTACTGAAAAAACCCCATGAGATTCCGGTGACCAGCTTTTTTATCATCTAAATTGGATAGACTTATCCTGTCCAAGGATTCAAGGAGAAGTTGAAAATTAGAGATTTTCTCTTCTTTCAACAATCTTCTGAAATTAAGAGACCAGGAAGAGGTGGAGGAGTCCCAATATTTGGAAACTGAGCCTTGAGGAAAAAGGGCTATTCTGTACAGACTTGGAATTCTGGTCTTCAAAGCAATTCTGTCCAGCCACAGATCCAACCAAAACAAGATTCAGTCCCCCTTTCCAACTTTAATAGCATATGATGGCAAAGATGCAAATCTATTACTTTTTGTTTGAGGTCAGCACGCCTTAACCCTAAGTTCAAGCTGGCAATTGTTAAATTTTTAAGTGGAAGCTTTTTCAAAATAAGTAATGTTTTTTAGTATTGTATTATGAATAAAGTGGAAGTTTGAACACATGACCAGTATAGTTACTAAATGCCTAGTTATTTGAGCTAGGCCAAATTTGAGAAATTAAAGAGTCTGTGCTCTGGTACCACGTACAATAAAAGAAAGAGATGTTAAACGCTCGGTGCAGGGCATATCAATAAGTATTAATATTTAAAGATAACAAGATCACCTCATGTCATGATGTCACAAGAATACAGGACAAACAGATAACAGAAAAGATTGTCCAAAAATACAAGTAAAAGAAAGGAAAATAGAATTGAAATTATTGTGGTAAAAACTATTCACTGCTCATATTTTAAAGGGAAAAATATTACAGATATACTCGTTATCTTGTGCATTTTTGCTTTATTTTAAAAATAGCAAGCCCGTGTATTTCTTTTTCGTTGCTAGCTTTGGCTGGACACTATATAGAGCAAGGCCTACTTTACTTATAGTAACGTCTGCGACATTTGGTCAATAAATCCATACCTGTTTGTATTCACTCTTTAAACAGAGTCAGATAACTGTTGAGATTTGTATTTCTTTTGTTAAAGGACCAGCATGTTTATACTTGTAGGTTTTATTTATACAATCAGCTTGGACTAGAAGGTCTCGGGAGGAGGCTGCAAAGCGACCAAACAAGAAATCATGGAAACAAAGAACAGATATGTACATGAGGCCATTTTTACTAAATGTTTTCTTTTCGAAGAAATTTATCCATGCTAAGGTAATGCATAGAGGAACCAGCAAAGTGATATCAGTGGCAACAACAAATGCAAAGGACCTTAGAAACAGTTTACCATCACTTACAGATCACAATGCATGTCGAGTAATAGGGAAGCTTATTGCAGAGAGATCAAAGGAAGCAGATGTATATGCAATTTCGTATGAGCCTAGAAAGGATGAAAAAATTGAAGGTAAACTTGGCATTGTTATTGATACCATTAAGGAGAACGGGATCATGTTTGTACCTTGAATTTAAATCAGAGGTAGAATAGCAAGACGAGAAACAACTCATCTAAAGCCTCTTGTTGGCAGTAGATGATTGTACTGTAAAAGCTGACTTCCTCCTGTTTAGCTTGTTTGAAATATCCGAAGCTGTTGCCCTTACTAAAAGCTCTTTTACTTGCTATGCCAAAACACTACTTTATTTAATTAATTTTATGATTCTATTAGTAGAGTTGTGATTTCGCTTTTTTGGAAGGAAAGTTGTA

mRNA sequence

AGCATGAGGAGATGACTTTTTAACGCTCGGCCGTTCATCTTGGTAACTGCACTCGAATTTCTCCTCAATCCAGGTAAAGGTAAAAAAGCGGACAAATATCATTAGGCCTCACTTCCACCAAAAAGTCGCGGGTGGACGAATGACCTGAATTTGAACGATGGCCTTCACAGCAATAGCTTCTTCACTGCCATCTTGTTCTTCTGTGTTCTCCTCCCAGGGGCCATCAACTCCATTACAGAAATCCTCGTCTCTATCGTGGGCATCTTCTTTTCCGCATGTTAACATATTCAGAGGCTCTCCTTTCGCCTCTTCTAAACCCCCGTATGCCAAGGTTTTATTTATACAATCAGCTTGGACTAGAAGGTCTCGGGAGGAGGCTGCAAAGCGACCAAACAAGAAATCATGGAAACAAAGAACAGATATGTACATGAGGCCATTTTTACTAAATGTTTTCTTTTCGAAGAAATTTATCCATGCTAAGGTAATGCATAGAGGAACCAGCAAAGTGATATCAGTGGCAACAACAAATGCAAAGGACCTTAGAAACAGTTTACCATCACTTACAGATCACAATGCATGTCGAGTAATAGGGAAGCTTATTGCAGAGAGATCAAAGGAAGCAGATGTATATGCAATTTCGTATGAGCCTAGAAAGGATGAAAAAATTGAAGGTAAACTTGGCATTGTTATTGATACCATTAAGGAGAACGGGATCATGTTTGTACCTTGAATTTAAATCAGAGGTAGAATAGCAAGACGAGAAACAACTCATCTAAAGCCTCTTGTTGGCAGTAGATGATTGTACTGTAAAAGCTGACTTCCTCCTGTTTAGCTTGTTTGAAATATCCGAAGCTGTTGCCCTTACTAAAAGCTCTTTTACTTGCTATGCCAAAACACTACTTTATTTAATTAATTTTATGATTCTATTAGTAGAGTTGTGATTTCGCTTTTTTGGAAGGAAAGTTGTA

Coding sequence (CDS)

ATGGCCTTCACAGCAATAGCTTCTTCACTGCCATCTTGTTCTTCTGTGTTCTCCTCCCAGGGGCCATCAACTCCATTACAGAAATCCTCGTCTCTATCGTGGGCATCTTCTTTTCCGCATGTTAACATATTCAGAGGCTCTCCTTTCGCCTCTTCTAAACCCCCGTATGCCAAGGTTTTATTTATACAATCAGCTTGGACTAGAAGGTCTCGGGAGGAGGCTGCAAAGCGACCAAACAAGAAATCATGGAAACAAAGAACAGATATGTACATGAGGCCATTTTTACTAAATGTTTTCTTTTCGAAGAAATTTATCCATGCTAAGGTAATGCATAGAGGAACCAGCAAAGTGATATCAGTGGCAACAACAAATGCAAAGGACCTTAGAAACAGTTTACCATCACTTACAGATCACAATGCATGTCGAGTAATAGGGAAGCTTATTGCAGAGAGATCAAAGGAAGCAGATGTATATGCAATTTCGTATGAGCCTAGAAAGGATGAAAAAATTGAAGGTAAACTTGGCATTGTTATTGATACCATTAAGGAGAACGGGATCATGTTTGTACCTTGA

Protein sequence

MAFTAIASSLPSCSSVFSSQGPSTPLQKSSSLSWASSFPHVNIFRGSPFASSKPPYAKVLFIQSAWTRRSREEAAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDEKIEGKLGIVIDTIKENGIMFVP

Homology

[Close]

BLAST of Cmc03g0059891 vs. NCBI nr
Match: XP_008441144.1 (PREDICTED: 50S ribosomal protein L18-like [Cucumis melo])

HSP 1 Score: 368.2 bits (944), Expect = 4.2e-98
Identity = 189/190 (99.47%), Postives = 189/190 (99.47%), Query Frame = 0


Query: 1   MAFTAIASSLPSCSSVFSSQGPSTPLQKSSSLSWASSFPHVNIFRGSPFASSKPPYAKVL 60
           MAFTAIASSLPSCSSVFSSQGPSTPLQKSSSLSWASSFPHVNIFRGSPFASS PPYAKVL
Sbjct: 1   MAFTAIASSLPSCSSVFSSQGPSTPLQKSSSLSWASSFPHVNIFRGSPFASSNPPYAKVL 60

Query: 61  FIQSAWTRRSREEAAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTSKVISV 120
           FIQSAWTRRSREEAAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTSKVISV
Sbjct: 61  FIQSAWTRRSREEAAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTSKVISV 120

Query: 121 ATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDEKIEGKLGIVIDT 180
           ATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDEKIEGKLGIVIDT
Sbjct: 121 ATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDEKIEGKLGIVIDT 180

Query: 181 IKENGIMFVP 191
           IKENGIMFVP
Sbjct: 181 IKENGIMFVP 190

[Close]

BLAST of Cmc03g0059891 vs. NCBI nr
Match: XP_038886307.1 (50S ribosomal protein L18-like [Benincasa hispida])

HSP 1 Score: 324.3 bits (830), Expect = 6.9e-85
Identity = 171/189 (90.48%), Postives = 176/189 (93.12%), Query Frame = 0


Query: 1   MAFTAIASSLPSCSSVFSSQGPSTPLQKSSSLSWASSFPHVNIFRGSPFASSKPPYAKVL 60
           MAFTAI+SSLPSCSSV      S PL KSSSLSWASSFPHV+I RGSPFAS  P +AKVL
Sbjct: 1   MAFTAISSSLPSCSSV-----RSVPLPKSSSLSWASSFPHVSISRGSPFASFSPAHAKVL 60

Query: 61  FIQSAWTRRSREEAAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTSKVISV 120
           FIQSAWTRRSR EAAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTSKVISV
Sbjct: 61  FIQSAWTRRSRGEAAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTSKVISV 120

Query: 121 ATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDEKIEGKLGIVIDT 180
           ATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDE+IEGKLGIVIDT
Sbjct: 121 ATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDERIEGKLGIVIDT 180

Query: 181 IKENGIMFV 190
           IKENGI+FV
Sbjct: 181 IKENGILFV 184

[Close]

BLAST of Cmc03g0059891 vs. NCBI nr
Match: XP_023521951.1 (uncharacterized protein LOC111785799 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 320.5 bits (820), Expect = 1.0e-83
Identity = 170/196 (86.73%), Postives = 180/196 (91.84%), Query Frame = 0


Query: 1   MAFTAIASSLPSCSSV---FSSQ---GPSTPLQKSSSLSWASSFPHVNIFRGSPFASSKP 60
           MAFTAI+SS+PS +SV    SSQ    P+TP QKSSSLSWASSFP +++ RGSPF SS P
Sbjct: 1   MAFTAISSSMPSSASVRSILSSQCISTPTTPSQKSSSLSWASSFPSISLSRGSPFVSSNP 60

Query: 61  PYAKVLFIQSAWTRRSREEAAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGT 120
            +AKVLFIQSAWTRRSR EAAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGT
Sbjct: 61  AHAKVLFIQSAWTRRSRGEAAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGT 120

Query: 121 SKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDEKIEGKL 180
           SKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYA+SYEPRKDE+IEGKL
Sbjct: 121 SKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAMSYEPRKDERIEGKL 180

Query: 181 GIVIDTIKENGIMFVP 191
           GIVIDTIKENGIMFVP
Sbjct: 181 GIVIDTIKENGIMFVP 196

[Close]

BLAST of Cmc03g0059891 vs. NCBI nr
Match: XP_022990182.1 (uncharacterized protein LOC111487153 [Cucurbita maxima])

HSP 1 Score: 318.2 bits (814), Expect = 4.9e-83
Identity = 170/195 (87.18%), Postives = 179/195 (91.79%), Query Frame = 0


Query: 1   MAFTAIASSLPSCSSV---FSSQGPSTPL--QKSSSLSWASSFPHVNIFRGSPFASSKPP 60
           MAFTAI+SS+PS +SV    SSQ  STP   QKSSSLSWASSFP +++ RGSPF SS P 
Sbjct: 1   MAFTAISSSMPSSASVRSILSSQCISTPTTPQKSSSLSWASSFPSISLSRGSPFVSSNPA 60

Query: 61  YAKVLFIQSAWTRRSREEAAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTS 120
           +AKVLFIQSAWTRRSR EAAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTS
Sbjct: 61  HAKVLFIQSAWTRRSRGEAAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTS 120

Query: 121 KVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDEKIEGKLG 180
           KVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYA+SYEPRKDE+IEGKLG
Sbjct: 121 KVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAMSYEPRKDERIEGKLG 180

Query: 181 IVIDTIKENGIMFVP 191
           IVIDTIKENGIMFVP
Sbjct: 181 IVIDTIKENGIMFVP 195

[Close]

BLAST of Cmc03g0059891 vs. NCBI nr
Match: XP_022993255.1 (uncharacterized protein LOC111489327 [Cucurbita maxima])

HSP 1 Score: 317.8 bits (813), Expect = 6.5e-83
Identity = 170/196 (86.73%), Postives = 177/196 (90.31%), Query Frame = 0


Query: 1   MAFTAIASSLPSCS---SVFSSQGPSTPL---QKSSSLSWASSFPHVNIFRGSPFASSKP 60
           MAF AI+SSLPSCS   SV S Q PSTP    QKSSSLSWASSFPHV I RGS   SS P
Sbjct: 1   MAFIAISSSLPSCSSVPSVLSFQWPSTPTILSQKSSSLSWASSFPHVTISRGSHVVSSNP 60

Query: 61  PYAKVLFIQSAWTRRSREEAAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGT 120
            + KVLFI+SAWTRRSREEAAKRPNKKSWKQRTDMYMRPFLL+VFFSKKF+HAKVMHRGT
Sbjct: 61  AHDKVLFIRSAWTRRSREEAAKRPNKKSWKQRTDMYMRPFLLDVFFSKKFVHAKVMHRGT 120

Query: 121 SKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDEKIEGKL 180
           SKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYA+SYEPRKDE+IEGKL
Sbjct: 121 SKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAMSYEPRKDERIEGKL 180

Query: 181 GIVIDTIKENGIMFVP 191
           GIVIDTIKENGIMFVP
Sbjct: 181 GIVIDTIKENGIMFVP 196

[Close]

BLAST of Cmc03g0059891 vs. ExPASy Swiss-Prot
Match: Q5P316 (50S ribosomal protein L18 OS=Aromatoleum aromaticum (strain EbN1) OX=76114 GN=rplR PE=3 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.6e-07
Identity = 39/121 (32.23%), Postives = 68/121 (56.20%), Query Frame = 0


Query: 68  RRSREEAAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTSKVISVATTNAKD 127
           RR+R+  AK    KS +           L VF +   I+A+V+    S+V++ A+T   D
Sbjct: 9   RRARKTRAKIAELKSVR-----------LTVFRTNSHIYAQVIDGSGSRVLAAASTVEAD 68

Query: 128 LRNSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDEKIEGKLGIVIDTIKENGIM 187
           +R+ LP+  +  A +V+GKLIAER+K A V A++++ R   +  G++  + +  +E G+ 
Sbjct: 69  VRSQLPNGGNKQAAQVVGKLIAERAKAAGVEAVAFD-RAGFQYHGRVKALAEAAREGGLK 117

Query: 188 F 189
           F
Sbjct: 129 F 117

[Close]

BLAST of Cmc03g0059891 vs. ExPASy Swiss-Prot
Match: A9BG02 (50S ribosomal protein L18 OS=Petrotoga mobilis (strain DSM 10674 / SJ95) OX=403833 GN=rplR PE=3 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 3.5e-07
Identity = 36/121 (29.75%), Postives = 65/121 (53.72%), Query Frame = 0


Query: 76  KRPNKKSWKQRTDMYMRPFL--------LNVFFSKKFIHAKVMHRGTSKVISVATTNAKD 135
           K+ +KK+ +Q+  + +R  +        L VF S+K I+A+++       ++ A+T  K 
Sbjct: 3   KQLDKKALRQKRHLRVRKNVRGTSEKPRLTVFKSQKHIYAQIIDDTKGVTLASASTTQKQ 62

Query: 136 LRNSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDEKIEGKLGIVIDTIKENGIM 189
           L+  L    D NA + +GKLIAE++KE  +  I ++ R   K  GK+  + +  +E G+ 
Sbjct: 63  LKEKLEKTWDENAAKEVGKLIAEKAKEKGITEIVFD-RSGYKYHGKVKALAEAARETGLK 122

[Close]

BLAST of Cmc03g0059891 vs. ExPASy Swiss-Prot
Match: B7L0T4 (50S ribosomal protein L18 OS=Methylorubrum extorquens (strain CM4 / NCIMB 13688) OX=440085 GN=rplR PE=3 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 3.9e-06
Identity = 30/93 (32.26%), Postives = 53/93 (56.99%), Query Frame = 0


Query: 96  LNVFFSKKFIHAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEA 155
           L+VF S K I+ +V+     + ++ A++  KDL++SL +  D  A   +GKL+AER+K A
Sbjct: 29  LSVFRSSKQIYVQVIDDAAGRTLAAASSLDKDLKSSLKTGADKAAAEAVGKLVAERAKAA 88

Query: 156 DVYAISYEPRKDEKIEGKLGIVIDTIKENGIMF 189
            V  + ++ R      G++  + D  +E G+ F
Sbjct: 89  GVTKVVFD-RSGYIFHGRVKALADAAREGGLDF 120

[Close]

BLAST of Cmc03g0059891 vs. ExPASy Swiss-Prot
Match: A9W4S4 (50S ribosomal protein L18 OS=Methylorubrum extorquens (strain PA1) OX=419610 GN=rplR PE=3 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 3.9e-06
Identity = 30/93 (32.26%), Postives = 53/93 (56.99%), Query Frame = 0


Query: 96  LNVFFSKKFIHAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEA 155
           L+VF S K I+ +V+     + ++ A++  KDL++SL +  D  A   +GKL+AER+K A
Sbjct: 29  LSVFRSSKQIYVQVIDDAAGRTLAAASSLDKDLKSSLKTGADKAAAEAVGKLVAERAKAA 88

Query: 156 DVYAISYEPRKDEKIEGKLGIVIDTIKENGIMF 189
            V  + ++ R      G++  + D  +E G+ F
Sbjct: 89  GVTKVVFD-RSGYIFHGRVKALADAAREGGLDF 120

[Close]

BLAST of Cmc03g0059891 vs. ExPASy Swiss-Prot
Match: A5FZU9 (50S ribosomal protein L18 OS=Acidiphilium cryptum (strain JF-5) OX=349163 GN=rplR PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 6.6e-06
Identity = 35/117 (29.91%), Postives = 65/117 (55.56%), Query Frame = 0


Query: 72  EEAAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTSKVISVATTNAKDLRNS 131
           E  A+R  +  ++ R   + RP  L+VF S K I+A+V+     + ++ A++    LR++
Sbjct: 6   ENEARRRQRLRYQIRLKAHGRP-RLSVFRSGKHIYAQVIDDAAGRTLAAASSLDAGLRSA 65

Query: 132 LPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDEKIEGKLGIVIDTIKENGIMF 189
           L +  D  A   +GKL+AER+KEA V  + ++ R      G++  + +  +E+G+ F
Sbjct: 66  LKTGADKAAAAAVGKLVAERAKEAGVTQVVFD-RGAYMYHGRVKALAEAARESGLDF 120

[Close]

BLAST of Cmc03g0059891 vs. ExPASy TrEMBL
Match: A0A1S3B2Q8 (50S ribosomal protein L18-like OS=Cucumis melo OX=3656 GN=LOC103485371 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 2.0e-98
Identity = 189/190 (99.47%), Postives = 189/190 (99.47%), Query Frame = 0


Query: 1   MAFTAIASSLPSCSSVFSSQGPSTPLQKSSSLSWASSFPHVNIFRGSPFASSKPPYAKVL 60
           MAFTAIASSLPSCSSVFSSQGPSTPLQKSSSLSWASSFPHVNIFRGSPFASS PPYAKVL
Sbjct: 1   MAFTAIASSLPSCSSVFSSQGPSTPLQKSSSLSWASSFPHVNIFRGSPFASSNPPYAKVL 60

Query: 61  FIQSAWTRRSREEAAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTSKVISV 120
           FIQSAWTRRSREEAAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTSKVISV
Sbjct: 61  FIQSAWTRRSREEAAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTSKVISV 120

Query: 121 ATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDEKIEGKLGIVIDT 180
           ATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDEKIEGKLGIVIDT
Sbjct: 121 ATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDEKIEGKLGIVIDT 180

Query: 181 IKENGIMFVP 191
           IKENGIMFVP
Sbjct: 181 IKENGIMFVP 190

[Close]

BLAST of Cmc03g0059891 vs. ExPASy TrEMBL
Match: A0A6J1JHY7 (uncharacterized protein LOC111487153 OS=Cucurbita maxima OX=3661 GN=LOC111487153 PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 2.4e-83
Identity = 170/195 (87.18%), Postives = 179/195 (91.79%), Query Frame = 0


Query: 1   MAFTAIASSLPSCSSV---FSSQGPSTPL--QKSSSLSWASSFPHVNIFRGSPFASSKPP 60
           MAFTAI+SS+PS +SV    SSQ  STP   QKSSSLSWASSFP +++ RGSPF SS P 
Sbjct: 1   MAFTAISSSMPSSASVRSILSSQCISTPTTPQKSSSLSWASSFPSISLSRGSPFVSSNPA 60

Query: 61  YAKVLFIQSAWTRRSREEAAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTS 120
           +AKVLFIQSAWTRRSR EAAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTS
Sbjct: 61  HAKVLFIQSAWTRRSRGEAAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTS 120

Query: 121 KVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDEKIEGKLG 180
           KVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYA+SYEPRKDE+IEGKLG
Sbjct: 121 KVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAMSYEPRKDERIEGKLG 180

Query: 181 IVIDTIKENGIMFVP 191
           IVIDTIKENGIMFVP
Sbjct: 181 IVIDTIKENGIMFVP 195

[Close]

BLAST of Cmc03g0059891 vs. ExPASy TrEMBL
Match: A0A6J1JY30 (uncharacterized protein LOC111489327 OS=Cucurbita maxima OX=3661 GN=LOC111489327 PE=4 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 3.1e-83
Identity = 170/196 (86.73%), Postives = 177/196 (90.31%), Query Frame = 0


Query: 1   MAFTAIASSLPSCS---SVFSSQGPSTPL---QKSSSLSWASSFPHVNIFRGSPFASSKP 60
           MAF AI+SSLPSCS   SV S Q PSTP    QKSSSLSWASSFPHV I RGS   SS P
Sbjct: 1   MAFIAISSSLPSCSSVPSVLSFQWPSTPTILSQKSSSLSWASSFPHVTISRGSHVVSSNP 60

Query: 61  PYAKVLFIQSAWTRRSREEAAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGT 120
            + KVLFI+SAWTRRSREEAAKRPNKKSWKQRTDMYMRPFLL+VFFSKKF+HAKVMHRGT
Sbjct: 61  AHDKVLFIRSAWTRRSREEAAKRPNKKSWKQRTDMYMRPFLLDVFFSKKFVHAKVMHRGT 120

Query: 121 SKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDEKIEGKL 180
           SKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYA+SYEPRKDE+IEGKL
Sbjct: 121 SKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAMSYEPRKDERIEGKL 180

Query: 181 GIVIDTIKENGIMFVP 191
           GIVIDTIKENGIMFVP
Sbjct: 181 GIVIDTIKENGIMFVP 196

[Close]

BLAST of Cmc03g0059891 vs. ExPASy TrEMBL
Match: A0A6J1HH86 (uncharacterized protein LOC111464045 OS=Cucurbita moschata OX=3662 GN=LOC111464045 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 5.3e-83
Identity = 167/196 (85.20%), Postives = 179/196 (91.33%), Query Frame = 0


Query: 1   MAFTAIASSLPSCS---SVFSSQ---GPSTPLQKSSSLSWASSFPHVNIFRGSPFASSKP 60
           MAFTAI+SS+PS +   S+ SSQ    P+TP QKSSSLSWASSFP +++ RGSPF SS P
Sbjct: 1   MAFTAISSSMPSSAFVRSILSSQCISTPTTPSQKSSSLSWASSFPSISLSRGSPFVSSNP 60

Query: 61  PYAKVLFIQSAWTRRSREEAAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGT 120
            +AKVLFIQSAWTRRSR EAAKRPNKKSWKQRTDMYMRPFLLNVFFSKKF+HAKVMHRGT
Sbjct: 61  AHAKVLFIQSAWTRRSRGEAAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFMHAKVMHRGT 120

Query: 121 SKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDEKIEGKL 180
           SKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYA+SYEPRKDE+IEGKL
Sbjct: 121 SKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAMSYEPRKDERIEGKL 180

Query: 181 GIVIDTIKENGIMFVP 191
           GIVID IKENGIMFVP
Sbjct: 181 GIVIDAIKENGIMFVP 196

[Close]

BLAST of Cmc03g0059891 vs. ExPASy TrEMBL
Match: A0A6J1DE20 (uncharacterized protein LOC111020202 OS=Momordica charantia OX=3673 GN=LOC111020202 PE=4 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 5.9e-82
Identity = 166/196 (84.69%), Postives = 177/196 (90.31%), Query Frame = 0


Query: 1   MAFTAIASSLPSCS---SVFSSQ---GPSTPLQKSSSLSWASSFPHVNIFRGSPFASSKP 60
           MAFTA++SSLPSCS   SV SSQ    P+TP +K SSLSW SSFP+++I  GS   SS P
Sbjct: 7   MAFTAVSSSLPSCSSVRSVLSSQWLSDPTTPSRKPSSLSWVSSFPNISISTGSSSISSNP 66

Query: 61  PYAKVLFIQSAWTRRSREEAAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGT 120
            +AKVLFIQSAWTRRSR EAAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGT
Sbjct: 67  AHAKVLFIQSAWTRRSRGEAAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGT 126

Query: 121 SKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDEKIEGKL 180
           SKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYA+SYEPRKDE++EGKL
Sbjct: 127 SKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIAERSKEADVYAMSYEPRKDERVEGKL 186

Query: 181 GIVIDTIKENGIMFVP 191
           GIVIDTIKENGIMFVP
Sbjct: 187 GIVIDTIKENGIMFVP 202

[Close]

BLAST of Cmc03g0059891 vs. TAIR 10
Match: AT3G20230.1 (Ribosomal L18p/L5e family protein )

HSP 1 Score: 240.0 bits (611), Expect = 1.6e-63
Identity = 122/161 (75.78%), Postives = 141/161 (87.58%), Query Frame = 0


Query: 30  SSLSWASSFPHVNIFRGSPFASSKPPYAKVLFIQSAWTRRSREEAAKRPNKKSWKQRTDM 89
           S++SW SSFP ++I  GS  +S  P   K  F+Q+AWTRRSR EAAKRPN+KSWKQRTDM
Sbjct: 29  SAVSWQSSFPKLSIEIGSVISS--PIVKKDSFVQAAWTRRSRGEAAKRPNRKSWKQRTDM 88

Query: 90  YMRPFLLNVFFSKKFIHAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIA 149
           YMRPFLLNVFFS+KFIHAKVMHR TSKVISVATTNA+D+R ++PSL D+ ACR+IGKLIA
Sbjct: 89  YMRPFLLNVFFSRKFIHAKVMHRPTSKVISVATTNARDIRTNIPSLVDNEACRLIGKLIA 148

Query: 150 ERSKEADVYAISYEPRKDEKIEGKLGIVIDTIKENGIMFVP 191
           ERS EADVYA+SYEPRK E+IEGKLGIVIDTIKE+GI+FVP
Sbjct: 149 ERSMEADVYAVSYEPRKGERIEGKLGIVIDTIKEHGIIFVP 187

[Close]

BLAST of Cmc03g0059891 vs. TAIR 10
Match: AT1G08845.1 (Ribosomal L18p/L5e family protein )

HSP 1 Score: 110.5 bits (275), Expect = 1.5e-24
Identity = 56/117 (47.86%), Postives = 82/117 (70.09%), Query Frame = 0


Query: 71  REEAAKRPNKK-SWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTSKVISVATTNAKDLR 130
           +E+ +K P+K  S+KQRT  YM PF L+VF SK+F+ A + HR T + ++VA TN+KD++
Sbjct: 66  KEKKSKNPDKHVSFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTCRQVAVAGTNSKDVK 125

Query: 131 NSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDEKIEGKLGIVIDTIKENGI 187
             L S  D  AC  IG++++ER+KEADVY  SY PR  +K EGK+  V+ ++ +NGI
Sbjct: 126 AVLRSRCDIPACMSIGRILSERAKEADVYTASYTPRDQDKFEGKIRAVVQSLIDNGI 182

[Close]

BLAST of Cmc03g0059891 vs. TAIR 10
Match: AT1G08845.2 (Ribosomal L18p/L5e family protein )

HSP 1 Score: 110.5 bits (275), Expect = 1.5e-24
Identity = 56/117 (47.86%), Postives = 82/117 (70.09%), Query Frame = 0


Query: 71  REEAAKRPNKK-SWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTSKVISVATTNAKDLR 130
           +E+ +K P+K  S+KQRT  YM PF L+VF SK+F+ A + HR T + ++VA TN+KD++
Sbjct: 111 KEKKSKNPDKHVSFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTCRQVAVAGTNSKDVK 170

Query: 131 NSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDEKIEGKLGIVIDTIKENGI 187
             L S  D  AC  IG++++ER+KEADVY  SY PR  +K EGK+  V+ ++ +NGI
Sbjct: 171 AVLRSRCDIPACMSIGRILSERAKEADVYTASYTPRDQDKFEGKIRAVVQSLIDNGI 227

[Close]

BLAST of Cmc03g0059891 vs. TAIR 10
Match: AT3G22450.1 (Ribosomal L18p/L5e family protein )

HSP 1 Score: 89.0 bits (219), Expect = 4.5e-18
Identity = 46/120 (38.33%), Postives = 75/120 (62.50%), Query Frame = 0


Query: 67  TRRSREEAAKRPNKKSWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTSKVISVATTNAK 126
           T    E   KR    ++ Q T  +  PF L+++ SK+ + A V+HR TSKV++VA + +K
Sbjct: 171 TDHPNEAVKKRERTFTFNQLTAPFHYPFCLDIYISKESVRACVIHRVTSKVVTVAHSISK 230

Query: 127 DLRNSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDEKIEGKLGIVIDTIKENGI 186
           D++  L S  +  AC  +G ++A+RS E D++ + Y PRK +KIEGKL +V+  + +NG+
Sbjct: 231 DMKFDLGSRRNVAACAAVGAVLAQRSLEDDIHDVIYTPRKGDKIEGKLQVVLQALIDNGV 290

[Close]

BLAST of Cmc03g0059891 vs. TAIR 10
Match: AT5G27820.1 (Ribosomal L18p/L5e family protein )

HSP 1 Score: 72.8 bits (177), Expect = 3.4e-13
Identity = 33/97 (34.02%), Postives = 62/97 (63.92%), Query Frame = 0


Query: 90  YMRPFLLNVFFSKKFIHAKVMHRGTSKVISVATTNAKDLRNSLPSLTDHNACRVIGKLIA 149
           Y++P++L + F+ KF+HA+V+H  T+ V   A++  K LR ++    D  A   IGK++ 
Sbjct: 15  YLKPYVLKMHFTNKFVHAQVIHSPTATVACSASSQEKALRETMDITRDVAAASKIGKILG 74

Query: 150 ERSKEADVYAISYEPRKDEKIEGKLGIVIDTIKENGI 187
           ER    D+ A++ + +K+++  GK+  VID+++E G+
Sbjct: 75  ERLLMKDIPAVTIQMKKEQRYHGKVKAVIDSVREAGV 111

The following BLAST results are available for this feature:

BLAST of Cmc03g0059891 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441144.1	4.2e-98	99.47	PREDICTED: 50S ribosomal protein L18-like [Cucumis melo]	[more]
XP_038886307.1	6.9e-85	90.48	50S ribosomal protein L18-like [Benincasa hispida]	[more]
XP_023521951.1	1.0e-83	86.73	uncharacterized protein LOC111785799 [Cucurbita pepo subsp. pepo]	[more]
XP_022990182.1	4.9e-83	87.18	uncharacterized protein LOC111487153 [Cucurbita maxima]	[more]
XP_022993255.1	6.5e-83	86.73	uncharacterized protein LOC111489327 [Cucurbita maxima]	[more]

BLAST of Cmc03g0059891 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5P316	1.6e-07	32.23	50S ribosomal protein L18 OS=Aromatoleum aromaticum (strain EbN1) OX=76114 GN=rp...	[more]
A9BG02	3.5e-07	29.75	50S ribosomal protein L18 OS=Petrotoga mobilis (strain DSM 10674 / SJ95) OX=4038...	[more]
B7L0T4	3.9e-06	32.26	50S ribosomal protein L18 OS=Methylorubrum extorquens (strain CM4 / NCIMB 13688)...	[more]
A9W4S4	3.9e-06	32.26	50S ribosomal protein L18 OS=Methylorubrum extorquens (strain PA1) OX=419610 GN=...	[more]
A5FZU9	6.6e-06	29.91	50S ribosomal protein L18 OS=Acidiphilium cryptum (strain JF-5) OX=349163 GN=rpl...	[more]

BLAST of Cmc03g0059891 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B2Q8	2.0e-98	99.47	50S ribosomal protein L18-like OS=Cucumis melo OX=3656 GN=LOC103485371 PE=4 SV=1	[more]
A0A6J1JHY7	2.4e-83	87.18	uncharacterized protein LOC111487153 OS=Cucurbita maxima OX=3661 GN=LOC111487153...	[more]
A0A6J1JY30	3.1e-83	86.73	uncharacterized protein LOC111489327 OS=Cucurbita maxima OX=3661 GN=LOC111489327...	[more]
A0A6J1HH86	5.3e-83	85.20	uncharacterized protein LOC111464045 OS=Cucurbita moschata OX=3662 GN=LOC1114640...	[more]
A0A6J1DE20	5.9e-82	84.69	uncharacterized protein LOC111020202 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]

BLAST of Cmc03g0059891 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20230.1	1.6e-63	75.78	Ribosomal L18p/L5e family protein	[more]
AT1G08845.1	1.5e-24	47.86	Ribosomal L18p/L5e family protein	[more]
AT1G08845.2	1.5e-24	47.86	Ribosomal L18p/L5e family protein	[more]
AT3G22450.1	4.5e-18	38.33	Ribosomal L18p/L5e family protein	[more]
AT5G27820.1	3.4e-13	34.02	Ribosomal L18p/L5e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005484	Ribosomal protein L18	PFAM	PF00861	Ribosomal_L18p	coord: 72..188 e-value: 1.6E-10 score: 41.3
IPR005484	Ribosomal protein L18	PANTHER	PTHR12899	39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL	coord: 16..188
None	No IPR available	GENE3D	3.30.420.100		coord: 68..188 e-value: 6.7E-16 score: 60.8
None	No IPR available	PANTHER	PTHR12899:SF16	OS02G0689700 PROTEIN	coord: 16..188
None	No IPR available	CDD	cd00432	Ribosomal_L18_L5e	coord: 83..186 e-value: 9.72191E-18 score: 72.5727
None	No IPR available	SUPERFAMILY	53137	Translational machinery components	coord: 90..186

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc03g0059891.1	Cmc03g0059891.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:1990904	ribonucleoprotein complex
cellular_component	GO:0005840	ribosome
molecular_function	GO:0008097	5S rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome