Cmc02g0059561 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc02g0059561
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	CASP-like protein
Location	CMiso1.1chr02: 24545183 .. 24545737 (+)
RNA-Seq Expression	Cmc02g0059561
Synteny	Cmc02g0059561

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATTGGAGTCCAAGTCTTGTTCTCATCATCATGATCATCAGCCCATCATCACCAACCTCCATCTTTGTTCCCAGATTATCCTCAGAGTTCTGGTAATCTCCTCCACTTTGGCTGCTACCTGGATCATCCTCACCGCCAAGCAATCCGTTCTCGTCTTTGGTATCCCTTTTGACGCTCGATACAACTACTCCTCAGCTTTCGAGTTCTTTGCTTTTGCTAACGCTATTGCATCTGCCTTCTGTTTTCTCTCCCTCTGCTTTCTAATTTTCTCATCAACTCGTCCAAGCAGCAGCACCCCGCCCAATTTCTACATCCTTTTCTTCTTTCGTCTCCATGACTTGTTGATGATGGGATTGGTGCTCAGCGGTTGCTCTGCTGCCACCGCCATCGGCTACGTGGGCAAGTACGGCAACACCCATGCGGGCTGGTCCCCCATCTGTAACCATTTCCCCTCCTTTTGTAATCGCGTTACTGCTTCCATTGCCATCTCTTATTTATCTGTCATTTGCCTTCTCATACTCACCATCCTTTCTCTCCATATCCACCACTAG

mRNA sequence

ATGGAATTGGAGTCCAAGTCTTGTTCTCATCATCATGATCATCAGCCCATCATCACCAACCTCCATCTTTGTTCCCAGATTATCCTCAGAGTTCTGGTAATCTCCTCCACTTTGGCTGCTACCTGGATCATCCTCACCGCCAAGCAATCCGTTCTCGTCTTTGGTATCCCTTTTGACGCTCGATACAACTACTCCTCAGCTTTCGAGTTCTTTGCTTTTGCTAACGCTATTGCATCTGCCTTCTGTTTTCTCTCCCTCTGCTTTCTAATTTTCTCATCAACTCGTCCAAGCAGCAGCACCCCGCCCAATTTCTACATCCTTTTCTTCTTTCGTCTCCATGACTTGTTGATGATGGGATTGGTGCTCAGCGGTTGCTCTGCTGCCACCGCCATCGGCTACGTGGGCAAGTACGGCAACACCCATGCGGGCTGGTCCCCCATCTGTAACCATTTCCCCTCCTTTTGTAATCGCGTTACTGCTTCCATTGCCATCTCTTATTTATCTGTCATTTGCCTTCTCATACTCACCATCCTTTCTCTCCATATCCACCACTAG

Coding sequence (CDS)

ATGGAATTGGAGTCCAAGTCTTGTTCTCATCATCATGATCATCAGCCCATCATCACCAACCTCCATCTTTGTTCCCAGATTATCCTCAGAGTTCTGGTAATCTCCTCCACTTTGGCTGCTACCTGGATCATCCTCACCGCCAAGCAATCCGTTCTCGTCTTTGGTATCCCTTTTGACGCTCGATACAACTACTCCTCAGCTTTCGAGTTCTTTGCTTTTGCTAACGCTATTGCATCTGCCTTCTGTTTTCTCTCCCTCTGCTTTCTAATTTTCTCATCAACTCGTCCAAGCAGCAGCACCCCGCCCAATTTCTACATCCTTTTCTTCTTTCGTCTCCATGACTTGTTGATGATGGGATTGGTGCTCAGCGGTTGCTCTGCTGCCACCGCCATCGGCTACGTGGGCAAGTACGGCAACACCCATGCGGGCTGGTCCCCCATCTGTAACCATTTCCCCTCCTTTTGTAATCGCGTTACTGCTTCCATTGCCATCTCTTATTTATCTGTCATTTGCCTTCTCATACTCACCATCCTTTCTCTCCATATCCACCACTAG

Protein sequence

MELESKSCSHHHDHQPIITNLHLCSQIILRVLVISSTLAATWIILTAKQSVLVFGIPFDARYNYSSAFEFFAFANAIASAFCFLSLCFLIFSSTRPSSSTPPNFYILFFFRLHDLLMMGLVLSGCSAATAIGYVGKYGNTHAGWSPICNHFPSFCNRVTASIAISYLSVICLLILTILSLHIHH

Homology

[Close]

BLAST of Cmc02g0059561 vs. NCBI nr
Match: KAA0057743.1 (CASP-like protein 1F2 [Cucumis melo var. makuwa])

HSP 1 Score: 359.0 bits (920), Expect = 2.4e-95
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MELESKSCSHHHDHQPIITNLHLCSQIILRVLVISSTLAATWIILTAKQSVLVFGIPFDA 60
           MELESKSCSHHHDHQPIITNLHLCSQIILRVLVISSTLAATWIILTAKQSVLVFGIPFDA
Sbjct: 9   MELESKSCSHHHDHQPIITNLHLCSQIILRVLVISSTLAATWIILTAKQSVLVFGIPFDA 68

Query: 61  RYNYSSAFEFFAFANAIASAFCFLSLCFLIFSSTRPSSSTPPNFYILFFFRLHDLLMMGL 120
           RYNYSSAFEFFAFANAIASAFCFLSLCFLIFSSTRPSSSTPPNFYILFFFRLHDLLMMGL
Sbjct: 69  RYNYSSAFEFFAFANAIASAFCFLSLCFLIFSSTRPSSSTPPNFYILFFFRLHDLLMMGL 128

Query: 121 VLSGCSAATAIGYVGKYGNTHAGWSPICNHFPSFCNRVTASIAISYLSVICLLILTILSL 180
           VLSGCSAATAIGYVGKYGNTHAGWSPICNHFPSFCNRVTASIAISYLSVICLLILTILSL
Sbjct: 129 VLSGCSAATAIGYVGKYGNTHAGWSPICNHFPSFCNRVTASIAISYLSVICLLILTILSL 188

Query: 181 HIHH 185
           HIHH
Sbjct: 189 HIHH 192

[Close]

BLAST of Cmc02g0059561 vs. NCBI nr
Match: XP_008464379.1 (PREDICTED: CASP-like protein 1F2 [Cucumis melo] >TYJ98426.1 CASP-like protein 1F2 [Cucumis melo var. makuwa])

HSP 1 Score: 346.7 bits (888), Expect = 1.3e-91
Identity = 181/184 (98.37%), Postives = 181/184 (98.37%), Query Frame = 0


Query: 1   MELESKSCSHHHDHQPIITNLHLCSQIILRVLVISSTLAATWIILTAKQSVLVFGIPFDA 60
           MELESKSCSH HD QP ITNLHLCSQIILRVLVISSTLAATWIILTAKQSVLVFGIPFDA
Sbjct: 9   MELESKSCSHRHD-QPTITNLHLCSQIILRVLVISSTLAATWIILTAKQSVLVFGIPFDA 68

Query: 61  RYNYSSAFEFFAFANAIASAFCFLSLCFLIFSSTRPSSSTPPNFYILFFFRLHDLLMMGL 120
           RYNYSSAFEFFAFANAIASAFCFLSLCFLIFSSTRPSSSTPPNFYILFFFRLHDLLMMGL
Sbjct: 69  RYNYSSAFEFFAFANAIASAFCFLSLCFLIFSSTRPSSSTPPNFYILFFFRLHDLLMMGL 128

Query: 121 VLSGCSAATAIGYVGKYGNTHAGWSPICNHFPSFCNRVTASIAISYLSVICLLILTILSL 180
           VLSGCSAATAIGYVGKYGNTHAGWSPICNHFPSFCNRVTASIAISYLSVICLLILTILSL
Sbjct: 129 VLSGCSAATAIGYVGKYGNTHAGWSPICNHFPSFCNRVTASIAISYLSVICLLILTILSL 188

Query: 181 HIHH 185
           HIHH
Sbjct: 189 HIHH 191

[Close]

BLAST of Cmc02g0059561 vs. NCBI nr
Match: KGN63454.2 (hypothetical protein Csa_014266 [Cucumis sativus])

HSP 1 Score: 301.6 bits (771), Expect = 4.6e-78
Identity = 164/189 (86.77%), Postives = 169/189 (89.42%), Query Frame = 0


Query: 1   MELESKSCS--HHHDHQPIITNLHLC-SQIILRVLVISSTLAATWIILTAKQSVLVFGIP 60
           M+LE KS S  H HDH   ITNLHLC SQIILRVL I+STLAATWIILTAKQSVL+FGIP
Sbjct: 68  MDLEPKSGSDDHDHDHPTAITNLHLCYSQIILRVLAIASTLAATWIILTAKQSVLIFGIP 127

Query: 61  FDARYNYSSAFEFFAFANAIASAFCFLSLCFLIFSSTRPSS--STPPNFYILFFFRLHDL 120
           FDARYN SSAF+FFAFANAIASAFCFLSLCFLIF STRPSS  STP NFYI FFFRLHDL
Sbjct: 128 FDARYNDSSAFQFFAFANAIASAFCFLSLCFLIFLSTRPSSNTSTPLNFYIFFFFRLHDL 187

Query: 121 LMMGLVLSGCSAATAIGYVGKYGNTHAGWSPICNHFPSFCNRVTASIAISYLSVICLLIL 180
           LMMGLVLSGCSAATAIG+VGKYGNTH GWSPICNHFPSFCNRVTASIAISY SVICLLIL
Sbjct: 188 LMMGLVLSGCSAATAIGFVGKYGNTHTGWSPICNHFPSFCNRVTASIAISYFSVICLLIL 247

Query: 181 TILSLHIHH 185
           T LSLH HH
Sbjct: 248 TTLSLHTHH 256

[Close]

BLAST of Cmc02g0059561 vs. NCBI nr
Match: XP_004138247.1 (CASP-like protein 1F2 [Cucumis sativus])

HSP 1 Score: 301.6 bits (771), Expect = 4.6e-78
Identity = 164/189 (86.77%), Postives = 169/189 (89.42%), Query Frame = 0


Query: 1   MELESKSCS--HHHDHQPIITNLHLC-SQIILRVLVISSTLAATWIILTAKQSVLVFGIP 60
           M+LE KS S  H HDH   ITNLHLC SQIILRVL I+STLAATWIILTAKQSVL+FGIP
Sbjct: 13  MDLEPKSGSDDHDHDHPTAITNLHLCYSQIILRVLAIASTLAATWIILTAKQSVLIFGIP 72

Query: 61  FDARYNYSSAFEFFAFANAIASAFCFLSLCFLIFSSTRPSS--STPPNFYILFFFRLHDL 120
           FDARYN SSAF+FFAFANAIASAFCFLSLCFLIF STRPSS  STP NFYI FFFRLHDL
Sbjct: 73  FDARYNDSSAFQFFAFANAIASAFCFLSLCFLIFLSTRPSSNTSTPLNFYIFFFFRLHDL 132

Query: 121 LMMGLVLSGCSAATAIGYVGKYGNTHAGWSPICNHFPSFCNRVTASIAISYLSVICLLIL 180
           LMMGLVLSGCSAATAIG+VGKYGNTH GWSPICNHFPSFCNRVTASIAISY SVICLLIL
Sbjct: 133 LMMGLVLSGCSAATAIGFVGKYGNTHTGWSPICNHFPSFCNRVTASIAISYFSVICLLIL 192

Query: 181 TILSLHIHH 185
           T LSLH HH
Sbjct: 193 TTLSLHTHH 201

[Close]

BLAST of Cmc02g0059561 vs. NCBI nr
Match: XP_038880088.1 (CASP-like protein 1F2 [Benincasa hispida])

HSP 1 Score: 218.8 bits (556), Expect = 4.0e-53
Identity = 125/185 (67.57%), Postives = 141/185 (76.22%), Query Frame = 0


Query: 1   MELESKSCSHHHDHQPIITNLHLCSQIILRVLVISSTLAATWIILTAKQSVLVFGIPFDA 60
           MELE KS + H       TNLHLCSQI LR LVISSTLAAT +I++AKQSVL+ GIPFDA
Sbjct: 53  MELEPKSSNSHFSSS---TNLHLCSQIFLRALVISSTLAATLLIISAKQSVLILGIPFDA 112

Query: 61  RYNYSSAFEFFAFANAIASAFCFLSLCFLIFSSTRPSS------STPPNFYILFFFRLHD 120
           RY YSSAF FFA ANAI+ AF FLS C +  S  R +S      +   N+YI F   LHD
Sbjct: 113 RYTYSSAFVFFALANAISCAFSFLSACLVFISIPRLASGNNNHGTRNRNYYIFF---LHD 172

Query: 121 LLMMGLVLSGCSAATAIGYVGKYGNTHAGWSPICNHFPSFCNRVTASIAISYLSVICLLI 180
           LLMMGL+L+GCSAATAIG VGKYGN H GWSPIC+HFP FC+RVTAS+AISY SV+CLLI
Sbjct: 173 LLMMGLLLAGCSAATAIGCVGKYGNDHTGWSPICDHFPKFCDRVTASLAISYFSVLCLLI 231

[Close]

BLAST of Cmc02g0059561 vs. ExPASy Swiss-Prot
Match: B9I3X5 (CASP-like protein 1F2 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_823430 PE=3 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 4.9e-38
Identity = 88/179 (49.16%), Postives = 124/179 (69.27%), Query Frame = 0


Query: 2   ELESKSCSHHHDHQPIIT-NLHLCSQIILRVLVISSTLAATWIILTAKQSVLVFGIPFDA 61
           ++E+KS      +QP+ T N+ + +QI LR++VI+++ A+TW++LT KQ++ + G   DA
Sbjct: 3   DIETKS----SQNQPLKTQNIFIGAQIFLRIVVIAASFASTWLMLTNKQTIDIGGFVLDA 62

Query: 62  RYNYSSAFEFFAFANAIASAFCFLSLCFLIFSSTRPSSSTPPNFYILFFFRLHDLLMMGL 121
            Y+YS  F+F ++AN +  AF F+SL FL+    R  SS P  ++ILF   LHDL +M L
Sbjct: 63  NYSYSPEFKFLSYANIVVGAFSFVSLLFLVLVGRR--SSNPTYYFILF---LHDLALMSL 122

Query: 122 VLSGCSAATAIGYVGKYGNTHAGWSPICNHFPSFCNRVTASIAISYLSVICLLILTILS 180
           VL GC+AAT IG +GKYGN+H GW  IC+HF  FC R T S+A SY S++CLLILTI S
Sbjct: 123 VLGGCAAATVIGSLGKYGNSHTGWMQICDHFGKFCKRATTSVAFSYFSLVCLLILTITS 172

[Close]

BLAST of Cmc02g0059561 vs. ExPASy Swiss-Prot
Match: B9RA90 (CASP-like protein 1F1 OS=Ricinus communis OX=3988 GN=RCOM_1504680 PE=2 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 5.4e-37
Identity = 89/159 (55.97%), Postives = 114/159 (71.70%), Query Frame = 0


Query: 21  LHLCSQIILRVLVISSTLAATWIILTAKQSVLVFGIPFDARYNYSSAFEFFAFANAIASA 80
           L + +QI LR++ I +TLAATWI++T KQS+        A+YNYSSAF+FF  AN IA A
Sbjct: 17  LFIGAQICLRIVTIGATLAATWIMVTDKQSITFGDFVMVAKYNYSSAFKFFVLANVIACA 76

Query: 81  FCFLSLCFLIFSSTRPSSSTPPNFYILFFFRLHDLLMMGLVLSGCSAATAIGYVGKYGNT 140
              +SL FL   +    SS P + ++LF   LHDLLMM LVL+GCSAATAIG++GKYGNT
Sbjct: 77  CSVVSLLFL--CALGRYSSNPGHVFLLF---LHDLLMMSLVLAGCSAATAIGFLGKYGNT 136

Query: 141 HAGWSPICNHFPSFCNRVTASIAISYLSVICLLILTILS 180
            +GW PIC+ F  FCNR T S+ +SYLS++CLLILT+ S
Sbjct: 137 KSGWMPICDQFGQFCNRGTISMMLSYLSMVCLLILTVTS 170

[Close]

BLAST of Cmc02g0059561 vs. ExPASy Swiss-Prot
Match: A7PHN8 (CASP-like protein 1F1 OS=Vitis vinifera OX=29760 GN=VIT_17s0000g00560 PE=2 SV=2)

HSP 1 Score: 149.4 bits (376), Expect = 3.9e-35
Identity = 84/159 (52.83%), Postives = 115/159 (72.33%), Query Frame = 0


Query: 21  LHLCSQIILRVLVISSTLAATWIILTAKQSVLVFGIPFDARYNYSSAFEFFAFANAIASA 80
           L L + I LR+L +++TL A W+++T+KQ+V V+GI  +A+Y+YSSAF+FF++ANAIA  
Sbjct: 44  LFLGAHICLRILTVTATLTAAWMMITSKQTVEVYGIQVEAKYSYSSAFKFFSYANAIACG 103

Query: 81  FCFLSLCFLIFSSTRPSSSTPPNFYILFFFRLHDLLMMGLVLSGCSAATAIGYVGKYGNT 140
              L+L F  FS      STP  F+ LF   LHDL MM LVL+GC+AATAIGYVG+YGN 
Sbjct: 104 CSVLTL-FPAFSLFY-RGSTPMKFFFLF---LHDLCMMSLVLAGCAAATAIGYVGRYGNN 163

Query: 141 HAGWSPICNHFPSFCNRVTASIAISYLSVICLLILTILS 180
           HAGW  IC+ F  +CNR+  S+  SYL+ + +L+LTI+S
Sbjct: 164 HAGWMAICDQFDEYCNRIRLSLMFSYLAFVFILMLTIMS 197

[Close]

BLAST of Cmc02g0059561 vs. ExPASy Swiss-Prot
Match: B9IFI5 (CASP-like protein 1F1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_824792 PE=2 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.2e-33
Identity = 79/167 (47.31%), Postives = 114/167 (68.26%), Query Frame = 0


Query: 14  HQPIIT-NLHLCSQIILRVLVISSTLAATWIILTAKQSVLVFGIPFDARYNYSSAFEFFA 73
           +QP+ T  L +  QI  R++ I++++A++W+++T+KQ + + GI  DARY+YS  F+F A
Sbjct: 11  NQPLKTQKLFIGVQIFFRIVAIAASVASSWLMITSKQVIDIGGIVLDARYSYSPEFKFLA 70

Query: 74  FANAIASAFCFLSLCFLIFSSTRPSSSTPPNFYILFFFRLHDLLMMGLVLSGCSAATAIG 133
           F N +   F  LSL FL+    + S+   PN Y  FF  LHDL MM LV+ GC+AAT +G
Sbjct: 71  FTNIVVGCFSLLSLLFLVLVVRQGSN---PNHY--FFLFLHDLAMMSLVVGGCAAATTVG 130

Query: 134 YVGKYGNTHAGWSPICNHFPSFCNRVTASIAISYLSVICLLILTILS 180
           ++GK+GN+H GW  IC++F  FCNR   S+ ISYL++ICL ILTI S
Sbjct: 131 FLGKHGNSHTGWMQICDNFGKFCNRAQTSVTISYLNLICLSILTITS 172

[Close]

BLAST of Cmc02g0059561 vs. ExPASy Swiss-Prot
Match: B9RH17 (CASP-like protein 1F2 OS=Ricinus communis OX=3988 GN=RCOM_1446020 PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.3e-27
Identity = 67/157 (42.68%), Postives = 101/157 (64.33%), Query Frame = 0


Query: 25  SQIILRVLVISSTLAATWIILTAKQSVLVFGIPFDARYNYSSAFEFFAFANAIASAFCFL 84
           +Q+I R+L I+  +A+   ++T+ Q+V+VFG+   ARY+YSSAF F   ANA+   F  L
Sbjct: 34  AQVIFRILAIAFAVASISAMVTSDQNVIVFGMDTAARYSYSSAFRFLVGANAVVCGFSVL 93

Query: 85  SLCFLIFSSTRPSSSTPPNFYILFFFRLHDLLMMGLVLSGCSAATAIGYVGKYGNTHAGW 144
           SL F+   S R  +    N+Y+     LHD++MM +++SGCSAATAIGYVG+YG     W
Sbjct: 94  SLIFVCLMSRRSEAILEKNYYLF----LHDMVMMVMMVSGCSAATAIGYVGRYGEKEITW 153

Query: 145 SPICNHFPSFCNRVTASIAISYLSVICLLILTILSLH 182
           + +C+    FCN+   SI ++YL++ C + LT L+ H
Sbjct: 154 TAVCDFVGKFCNQALVSIVLAYLALFCYVALTTLAAH 186

[Close]

BLAST of Cmc02g0059561 vs. ExPASy TrEMBL
Match: A0A5A7UPF9 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00240 PE=3 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 1.2e-95
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MELESKSCSHHHDHQPIITNLHLCSQIILRVLVISSTLAATWIILTAKQSVLVFGIPFDA 60
           MELESKSCSHHHDHQPIITNLHLCSQIILRVLVISSTLAATWIILTAKQSVLVFGIPFDA
Sbjct: 9   MELESKSCSHHHDHQPIITNLHLCSQIILRVLVISSTLAATWIILTAKQSVLVFGIPFDA 68

Query: 61  RYNYSSAFEFFAFANAIASAFCFLSLCFLIFSSTRPSSSTPPNFYILFFFRLHDLLMMGL 120
           RYNYSSAFEFFAFANAIASAFCFLSLCFLIFSSTRPSSSTPPNFYILFFFRLHDLLMMGL
Sbjct: 69  RYNYSSAFEFFAFANAIASAFCFLSLCFLIFSSTRPSSSTPPNFYILFFFRLHDLLMMGL 128

Query: 121 VLSGCSAATAIGYVGKYGNTHAGWSPICNHFPSFCNRVTASIAISYLSVICLLILTILSL 180
           VLSGCSAATAIGYVGKYGNTHAGWSPICNHFPSFCNRVTASIAISYLSVICLLILTILSL
Sbjct: 129 VLSGCSAATAIGYVGKYGNTHAGWSPICNHFPSFCNRVTASIAISYLSVICLLILTILSL 188

Query: 181 HIHH 185
           HIHH
Sbjct: 189 HIHH 192

[Close]

BLAST of Cmc02g0059561 vs. ExPASy TrEMBL
Match: A0A5D3BHA2 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00240 PE=3 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 6.1e-92
Identity = 181/184 (98.37%), Postives = 181/184 (98.37%), Query Frame = 0


Query: 1   MELESKSCSHHHDHQPIITNLHLCSQIILRVLVISSTLAATWIILTAKQSVLVFGIPFDA 60
           MELESKSCSH HD QP ITNLHLCSQIILRVLVISSTLAATWIILTAKQSVLVFGIPFDA
Sbjct: 9   MELESKSCSHRHD-QPTITNLHLCSQIILRVLVISSTLAATWIILTAKQSVLVFGIPFDA 68

Query: 61  RYNYSSAFEFFAFANAIASAFCFLSLCFLIFSSTRPSSSTPPNFYILFFFRLHDLLMMGL 120
           RYNYSSAFEFFAFANAIASAFCFLSLCFLIFSSTRPSSSTPPNFYILFFFRLHDLLMMGL
Sbjct: 69  RYNYSSAFEFFAFANAIASAFCFLSLCFLIFSSTRPSSSTPPNFYILFFFRLHDLLMMGL 128

Query: 121 VLSGCSAATAIGYVGKYGNTHAGWSPICNHFPSFCNRVTASIAISYLSVICLLILTILSL 180
           VLSGCSAATAIGYVGKYGNTHAGWSPICNHFPSFCNRVTASIAISYLSVICLLILTILSL
Sbjct: 129 VLSGCSAATAIGYVGKYGNTHAGWSPICNHFPSFCNRVTASIAISYLSVICLLILTILSL 188

Query: 181 HIHH 185
           HIHH
Sbjct: 189 HIHH 191

[Close]

BLAST of Cmc02g0059561 vs. ExPASy TrEMBL
Match: A0A1S3CLB6 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103502282 PE=3 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 6.1e-92
Identity = 181/184 (98.37%), Postives = 181/184 (98.37%), Query Frame = 0


Query: 1   MELESKSCSHHHDHQPIITNLHLCSQIILRVLVISSTLAATWIILTAKQSVLVFGIPFDA 60
           MELESKSCSH HD QP ITNLHLCSQIILRVLVISSTLAATWIILTAKQSVLVFGIPFDA
Sbjct: 9   MELESKSCSHRHD-QPTITNLHLCSQIILRVLVISSTLAATWIILTAKQSVLVFGIPFDA 68

Query: 61  RYNYSSAFEFFAFANAIASAFCFLSLCFLIFSSTRPSSSTPPNFYILFFFRLHDLLMMGL 120
           RYNYSSAFEFFAFANAIASAFCFLSLCFLIFSSTRPSSSTPPNFYILFFFRLHDLLMMGL
Sbjct: 69  RYNYSSAFEFFAFANAIASAFCFLSLCFLIFSSTRPSSSTPPNFYILFFFRLHDLLMMGL 128

Query: 121 VLSGCSAATAIGYVGKYGNTHAGWSPICNHFPSFCNRVTASIAISYLSVICLLILTILSL 180
           VLSGCSAATAIGYVGKYGNTHAGWSPICNHFPSFCNRVTASIAISYLSVICLLILTILSL
Sbjct: 129 VLSGCSAATAIGYVGKYGNTHAGWSPICNHFPSFCNRVTASIAISYLSVICLLILTILSL 188

Query: 181 HIHH 185
           HIHH
Sbjct: 189 HIHH 191

[Close]

BLAST of Cmc02g0059561 vs. ExPASy TrEMBL
Match: A0A0A0LR45 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G000725 PE=3 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 2.2e-78
Identity = 164/189 (86.77%), Postives = 169/189 (89.42%), Query Frame = 0


Query: 1   MELESKSCS--HHHDHQPIITNLHLC-SQIILRVLVISSTLAATWIILTAKQSVLVFGIP 60
           M+LE KS S  H HDH   ITNLHLC SQIILRVL I+STLAATWIILTAKQSVL+FGIP
Sbjct: 13  MDLEPKSGSDDHDHDHPTAITNLHLCYSQIILRVLAIASTLAATWIILTAKQSVLIFGIP 72

Query: 61  FDARYNYSSAFEFFAFANAIASAFCFLSLCFLIFSSTRPSS--STPPNFYILFFFRLHDL 120
           FDARYN SSAF+FFAFANAIASAFCFLSLCFLIF STRPSS  STP NFYI FFFRLHDL
Sbjct: 73  FDARYNDSSAFQFFAFANAIASAFCFLSLCFLIFLSTRPSSNTSTPLNFYIFFFFRLHDL 132

Query: 121 LMMGLVLSGCSAATAIGYVGKYGNTHAGWSPICNHFPSFCNRVTASIAISYLSVICLLIL 180
           LMMGLVLSGCSAATAIG+VGKYGNTH GWSPICNHFPSFCNRVTASIAISY SVICLLIL
Sbjct: 133 LMMGLVLSGCSAATAIGFVGKYGNTHTGWSPICNHFPSFCNRVTASIAISYFSVICLLIL 192

Query: 181 TILSLHIHH 185
           T LSLH HH
Sbjct: 193 TTLSLHTHH 201

[Close]

BLAST of Cmc02g0059561 vs. ExPASy TrEMBL
Match: A0A6J1C084 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006880 PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 8.9e-51
Identity = 121/179 (67.60%), Postives = 138/179 (77.09%), Query Frame = 0


Query: 1   MELESKSCSHHHDHQPIITNLHLCSQIILRVLVISSTLAATWIILTAKQSVLVFGIPFDA 60
           +ELES   +  H       NLHLCSQ ILR LVI+STLAA W++LTAKQSV+VFGIP DA
Sbjct: 4   IELESNKSNTSH-------NLHLCSQTILRGLVIASTLAAAWLMLTAKQSVIVFGIPLDA 63

Query: 61  RYNYSSAFEFFAFANAIASAFCFLSLCFLIFSSTRPSSSTPPNFYILFFFRLHDLLMMGL 120
           RY+YS AF+FFA ANAIA  FCFLS+  L   S R  +   PN YILF   LHDLLMM L
Sbjct: 64  RYSYSPAFKFFALANAIACGFCFLSVLLLFVLSHRLHNQ--PN-YILF---LHDLLMMVL 123

Query: 121 VLSGCSAATAIGYVGKYGNTHAGWSPICNHFPSFCNRVTASIAISYLSVICLLILTILS 180
           V SGC+A+TAIGYVGKYGN+H GWSPIC+HF  FCNRVT S+AISYL+VICLLILTI+S
Sbjct: 124 VASGCAASTAIGYVGKYGNSHTGWSPICDHFGKFCNRVTTSVAISYLAVICLLILTIIS 169

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BLAST of Cmc02g0059561 vs. TAIR 10
Match: AT4G25040.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 104.0 bits (258), Expect = 1.3e-22
Identity = 65/159 (40.88%), Postives = 95/159 (59.75%), Query Frame = 0


Query: 21  LHLCSQIILRVLVISSTLAATWIILTAKQSVLVFGIPFDARYNYSSAFEFFAFANAIASA 80
           L+L  Q+ +RVL I + +A+ W+++T ++   V+GI F+A+Y+YSSAF +  +A     A
Sbjct: 13  LNLGVQVSMRVLTIGAAMASMWVMITNREVASVYGIAFEAKYSYSSAFRYLVYAQIAVCA 72

Query: 81  FCFLSLCFLIFSSTRPSSSTPPNFYILFFFRLHDLLMMGLVLSGCSAATAIGYVGKYGNT 140
               +L +   +  R         + LFFF   DLL     +S  SAA A GYVGKYGN 
Sbjct: 73  ATLFTLVWACLAVRRRGL-----VFALFFF---DLLTTLTAISAFSAAFAEGYVGKYGNK 132

Query: 141 HAGWSPICNHFPSFCNRVTASIAISYLSVICLLILTILS 180
            AGW PIC +   +C+RVT S+A+S+ S I L ILT+L+
Sbjct: 133 QAGWLPICGYVHGYCSRVTISLAMSFASFILLFILTVLT 163

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BLAST of Cmc02g0059561 vs. TAIR 10
Match: AT4G03540.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 84.3 bits (207), Expect = 1.1e-16
Identity = 52/155 (33.55%), Postives = 88/155 (56.77%), Query Frame = 0


Query: 27  IILRVLVISSTLAATWIILTAKQSVLVFGIPFDARYNYSSAFEFFAFANAIASAFCFLSL 86
           ++LR+    + LAA  +++T+++      I  +A+Y   +AF++F  ANA+ S + FL L
Sbjct: 11  LVLRLAAFGAALAALIVMITSRERASFLAISLEAKYTDMAAFKYFVIANAVVSVYSFLVL 70

Query: 87  CFLIFSSTRPSSSTPPNFYILFFFRLHDLLMMGLVLSGCSAATAIGYVGKYGNTHAGWSP 146
            FL      P  S    F ++      DL+M  L+ S  SAA A+  VGK GN +AGW P
Sbjct: 71  -FL------PKESLLWKFVVVL-----DLVMTMLLTSSLSAALAVAQVGKKGNANAGWLP 130

Query: 147 ICNHFPSFCNRVTASIAISYLSVICLLILTILSLH 182
           IC   P FC+++T ++   +++++  ++L + SLH
Sbjct: 131 ICGQVPKFCDQITGALIAGFVALVLYVLLLLYSLH 153

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BLAST of Cmc02g0059561 vs. TAIR 10
Match: AT1G03700.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 75.1 bits (183), Expect = 6.6e-14
Identity = 51/155 (32.90%), Postives = 84/155 (54.19%), Query Frame = 0


Query: 27  IILRVLVISSTLAATWIILTAKQSVLVFGIPFDARYNYSSAFEFFAFANAIASAFCFLSL 86
           ++LR     + L A   ++T+++    F I   A+Y+  +AF++F  ANAI + + FL L
Sbjct: 11  LVLRFAAFCAALGAVIAMITSRERSSFFVISLVAKYSDLAAFKYFVIANAIVTVYSFLVL 70

Query: 87  CFLIFSSTRPSSSTPPNFYILFFFRLHDLLMMGLVLSGCSAATAIGYVGKYGNTHAGWSP 146
            FL      P  S    F ++      DL++  L+ S  SAA A+  VGK GN +AGW P
Sbjct: 71  -FL------PKESLLWKFVVVL-----DLMVTMLLTSSLSAAVAVAQVGKRGNANAGWLP 130

Query: 147 ICNHFPSFCNRVTASIAISYLSVICLLILTILSLH 182
           IC   P FC+++T ++    ++++  + L I S+H
Sbjct: 131 ICGQVPRFCDQITGALIAGLVALVLYVFLLIFSIH 153

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BLAST of Cmc02g0059561 vs. TAIR 10
Match: AT5G15290.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 73.2 bits (178), Expect = 2.5e-13
Identity = 49/156 (31.41%), Postives = 81/156 (51.92%), Query Frame = 0


Query: 26  QIILRVLVISSTLAATWIILTAKQSVLVFG--IPFDARYNYSSAFEFFAFANAIASAFCF 85
           + ILR++   +T+ +  ++ T  +++  F   I F A YN   A  FF  ANA+ S +  
Sbjct: 29  EFILRIVAFFNTIGSAILMGTTHETLPFFTQFIRFQAEYNDLPALTFFVVANAVVSGYLI 88

Query: 86  LSLCFLIFSSTRPSSSTPPNFYILFFFRLHDLLMMGLVLSGCSAATAIGYVGKYGNTHAG 145
           LSL        +  +       I+      D+ M+GL+ SG S+A AI Y+   GN    
Sbjct: 89  LSLTLAFVHIVKRKTQNTRILLIIL-----DVAMLGLLTSGASSAAAIVYLAHNGNNKTN 148

Query: 146 WSPICNHFPSFCNRVTASIAISYLSVICLLILTILS 180
           W  IC  F SFC R++ S+  S+++++ L++L +LS
Sbjct: 149 WFAICQQFNSFCERISGSLIGSFIAIVLLILLILLS 179

[Close]

BLAST of Cmc02g0059561 vs. TAIR 10
Match: AT4G15620.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 72.4 bits (176), Expect = 4.3e-13
Identity = 52/163 (31.90%), Postives = 84/163 (51.53%), Query Frame = 0


Query: 26  QIILRVLVISSTLAATWIILTAKQSVLV----------FGIPFDARYNYSSAFEFFAFAN 85
           ++ +RVL +  T+AA  ++  AKQ+ +V            I   A+ +Y SAF +    N
Sbjct: 28  ELTMRVLALILTMAAATVLGVAKQTKVVSIKLIPTLPPLDITTTAKASYLSAFVYNISVN 87

Query: 86  AIASAFCFLSLCFLIFSSTRPSSSTPPNFYILFFFRLHDLLMMGLVLSGCSAATAIGYVG 145
           AIA  +  +S+  L+ S  R S        +L    L DL+M+ L+ SG  AA+AIG +G
Sbjct: 88  AIACGYTAISIAILMISRGRRSKK------LLMVVLLGDLVMVALLFSGTGAASAIGLMG 147

Query: 146 KYGNTHAGWSPICNHFPSFCNRVTASIAISYLSVICLLILTIL 179
            +GN H  W  +C  F  FC+R   S+ ++ L+ +  + L +L
Sbjct: 148 LHGNKHVMWKKVCGVFGKFCHRAAPSLPLTLLAAVVFMFLVVL 184

The following BLAST results are available for this feature:

BLAST of Cmc02g0059561 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0057743.1	2.4e-95	100.00	CASP-like protein 1F2 [Cucumis melo var. makuwa]	[more]
XP_008464379.1	1.3e-91	98.37	PREDICTED: CASP-like protein 1F2 [Cucumis melo] >TYJ98426.1 CASP-like protein 1F...	[more]
KGN63454.2	4.6e-78	86.77	hypothetical protein Csa_014266 [Cucumis sativus]	[more]
XP_004138247.1	4.6e-78	86.77	CASP-like protein 1F2 [Cucumis sativus]	[more]
XP_038880088.1	4.0e-53	67.57	CASP-like protein 1F2 [Benincasa hispida]	[more]

BLAST of Cmc02g0059561 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9I3X5	4.9e-38	49.16	CASP-like protein 1F2 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_823430 PE=3 S...	[more]
B9RA90	5.4e-37	55.97	CASP-like protein 1F1 OS=Ricinus communis OX=3988 GN=RCOM_1504680 PE=2 SV=1	[more]
A7PHN8	3.9e-35	52.83	CASP-like protein 1F1 OS=Vitis vinifera OX=29760 GN=VIT_17s0000g00560 PE=2 SV=2	[more]
B9IFI5	1.2e-33	47.31	CASP-like protein 1F1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_824792 PE=2 S...	[more]
B9RH17	1.3e-27	42.68	CASP-like protein 1F2 OS=Ricinus communis OX=3988 GN=RCOM_1446020 PE=2 SV=1	[more]

BLAST of Cmc02g0059561 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UPF9	1.2e-95	100.00	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00...	[more]
A0A5D3BHA2	6.1e-92	98.37	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00...	[more]
A0A1S3CLB6	6.1e-92	98.37	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103502282 PE=3 SV=1	[more]
A0A0A0LR45	2.2e-78	86.77	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G000725 PE=3 SV=1	[more]
A0A6J1C084	8.9e-51	67.60	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006880 PE=3 SV=1	[more]

BLAST of Cmc02g0059561 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25040.1	1.3e-22	40.88	Uncharacterised protein family (UPF0497)	[more]
AT4G03540.1	1.1e-16	33.55	Uncharacterised protein family (UPF0497)	[more]
AT1G03700.1	6.6e-14	32.90	Uncharacterised protein family (UPF0497)	[more]
AT5G15290.1	2.5e-13	31.41	Uncharacterised protein family (UPF0497)	[more]
AT4G15620.1	4.3e-13	31.90	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006459	Casparian strip membrane protein	TIGRFAM	TIGR01569	TIGR01569	coord: 27..181 e-value: 2.1E-44 score: 149.0
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 25..171 e-value: 5.6E-38 score: 130.1
None	No IPR available	PANTHER	PTHR11615:SF264	CASP-LIKE PROTEIN 1F1	coord: 14..181
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 14..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc02g0059561.1	Cmc02g0059561.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003723	RNA binding