Cmc02g0059251 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc02g0059251
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Nuclear transcription factor Y subunit C
Location	CMiso1.1chr02: 24389810 .. 24395067 (-)
RNA-Seq Expression	Cmc02g0059251
Synteny	Cmc02g0059251

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTTTAAAATGGCAGAGGTGGAAGCCGAGAAACGAATCGTGAAGGCCTCTGTTACCTTATCTCAACTCTTTTCGGAGTTCTTTGTGTTTCTTTTCTTCTTTTTCTTCCTTCCTTCCATTTTCATCACTTCAAATATTTCTTCACATTCCCCAAATCTCCTCATTCTTCTTCCATTTGGGTCAACCGCCGCCGTCCCCGGCCGATGGACACCAACAATCAAGCTCAATCCTCTCCCTACCCTCCTCCTCAGGCCCCTGTTCCGGCCCCTCCCTTCCACCACCTCCTTCAGCAGCAACAACAACAGCTTCAGATGTTCTGGTCCTTCCAACGCCAAGAAATCGAACAGGTTAACGATTTTAAAAACCACCAGCTTCCTCTTGCCCGCATTAAGAAGATCATGAAAGCCGATGAGGACGTTCGTATGATCTCTGCCGAGGCCCCCATTTTGTTCGCTAAGGCTTGTGAGCTTTTTATTCTTGAACTCACTATTAGGTCATGGCTCCACGCCGAAGAGAATAAGAGGCGGACATTGCAGAAGAATGATATTGCTGCTGCTATCACGAGGACCGATATCTTTGATTTCTTAGTTGATATTGTTCCTAGGGATGAGATCAAGGACGAGGCTGGGTTGGGAGGTATGGTTGGAGCCACTGCTAGTGGAGTTCCGTACTATTATCCGCCTATGGGTCAACCGGCGGGGGCTCCCGGGGGAATGATGATTGGGAGACCGGCAATGGATCCCACTGGAGTTTACGCTCAGCCGCCGTCCCAGGCCTGGCAATCCGTGTGGCAGACCGCTGCTGAGGATGGTTCTTACGCGAGTGGGGCCAGCAGCGGGCAGGGTAATCTTGATGGTCAGAGGTAGGTGTTTCATGACTGTTTGTGTTATTTGAATTAGTAATGCAAAATTAAAGGTTCATCGTTTAAGCTTTATCTTGTGTTCTATCCGGATTGGTGCCGTGGATCAAGCTGAATTGATTTCTTACCCTTTTCCACGTTTGACCTGATTTCATATTAACGTCTTCATTACTGGGATATTGCATGTTGTTGTTGTTGTTATTTTCTCTTACTTGACTGGGTAATCCCCCAGCTAGAATGTGCTGATTTGTTGAGTAGTTTTTAAGAATTTTTATAGTGGTTTGAGCCGTTTTGGTTTAAAGTTCCCTATTTGGTTTTTTGCTGTCGAGTAATTTTTGTAATATTTCATCCCTTTTTTATGAGTCCCAATCCAAGAGGGATCTTTTAATTAAATATTTAAATAAGAGTCATCTTCTTTGACCTTTGCTTGACAGGTTATGTTATTTTCCTCCCTCTCCATCTCTTGTTTTTGACAAATGTTTCTTTTTAGTTCCGATATGTGAATTGCCCACCACAGTATCAATTTCAGTAGTTTTTCCTTTTTATTAATGACAAATGGAGTTTCTTCTCTTAAAAAAAAAAAAAAAAAAAAAAACTAATGCAAAATGGAGGGATATTTGTAATCCTCTTGGCTCGGTCAATATCCATCGCTCACCCTTGTTTTATATCGTCATTTTTATATCTCCATTTTCATGTAAGGAAGATCTGTTTCTGTCTCTTTATGAAACAAAAGTTACGAATCAGTAGCAACAGCAATGGTTGAGGTTGAAGCTTTCAAGCAGTTTATTTTTGAAAGTTGTAATATAAAAAGACATACAGAAAACAAGCCAATGAAAGGAACTTTCAACCTGTTTATTTTAGGCAATCAAGATCTGTCTTCACTTTTAGGGGGCGTTGAGTGATTACTTGAACTTCCCATTGATCTAAATATGTTATTCTTGTGACTTGGTGATGTCTTAATTATAGGAACTTCATATGTAATTATACCCTTTTCGTTATCATTAGCAATAGGAAACCTTTTTTATTCTCTTTGGGTGGGGGTTCCCTCTTCCCCCGCTCTTAGATTGTTCATTTCTCTTTGTTTAGTATATTCTGGTTTCTTTTTAAACGAAAAGACTTCATTTTTTCTTTAAGAAAAAAATGGGTAATAGTGTTTTTTCTCTTCTAATTAGCTTGTGTGCCAACAAGCACCTATCATTCAAATGAAGGGAGGATGAATTAGGTCCCAAAAGAATTATATTTTCTTTTCTGTTGATTTCTTCCCTTATAGCAGTGCATCTTGTATGAATCTTAGAATGAATGATTCATATTGTCCGAATATTGTATTCATAAAATTGAGAGAGCTTTTTCTCACTGCTTTTGAGAACTTTGAGACCTAAAGCTCGTGTTGATCACCTTTTAGTAGATTGGTTAACCAATTGCTCAATGATTTTTAGCTCTCTCCTATTAACCAAAATTGCTCATAAGAATAAAGTCATTTAGGAACGAGGATGGCTATTTGTGGATTGAAGAGGTGTTAAATAAAAGAGCGGATGATTTGTTGAAGTCTCCAAGGTGTTGATTGTGAGTAATGGGAGAAAAGTTAACCTTTTTGCTCTGGTAATGGCAGGGGAGGAGTGAATTGGTTTGAAGTCATTCATTGACCATGTGTGGTAGTTCCTATATAACGGGGGTCTAAAGGAAACATGACAAAAGGAATAAGTTAATGGCACGGTGTAGAGAGAACTCATTCCCAAAAAAGGGAGAGAAATTTTACCAAAAATATTTGTAATTTGTGCTCCACCAAGGGGCCAAGTGTTGTATGCTATGAACAAAAGAGTCTCCCAAGCCATGAATTCTCAATTAGCCGACTTGATCTTAACCTTCCCCCTGAAGCAAGTTCTGGACAGTGCTTCTAAGAGCTATTCGTCAATCTTCTTTGGGAGGCAAAGACCAGTCCTTACCCACAATAGAGCAATGTAGAATCAAATGATCAGTGGGCACTTTTCCCTTTGAGCCAAGGTCCTCCCCTCCCCTCCCCCAGCTCCTCAACTTTCAATCCACTTTGGTCATGTTTTGGAGGAATTTCAAGCTTCAATTCTTCGAACCACACTCAAAGTTGTGCCAAGAACTTAGTTCCATGATGATTTGGTTAAATTTTTTGTTGTTAGAGTCAAAGTATGCAGATCCATCTCGTACACAAGTTGTGCCAAGAACTTAGTTCCATGATGATTTGGTGTCTTAGATTTCACACTCAGAGTTAGAGGATGCTGATCGTGACCTCTAGTTAGATTTGGTTTTGATATGTAGAACATTGACTTCTATGGAAAATTCTCCATACAAGCTGAATACCTTTGTATAGCTAGGAAGAGATTATGAGAAGTTACTGACAATTTTTTAAAAGGCTACAGTTGACACCTTGACGTTGAGGTTTTTTAATCTTGAAGAGGTGGTGTAAGCTCTGAGGCGGTATGATACCTCCAACCAAGAATTCTAACAAATCATAAGTATGACCAAGTATTCGTAAACATAATAGTCATAAGAAGAGGAAAAAAAAAAAAAAAGAATAAAAAACACTCTTGTCAATTCCCACTTCAGCAAAATTTCTTAAAATGATATCTTTAACCTCACTTCTATTACCATTTACTGTAAAATTTTGTCTTCAATACTTATATATATATATACACACAATAGTTTTAAAGTTACAATAGTAAAAGTAGTAATAGTTCATATCGTCACAACTTTGAACTTTTATATTTTTTTGAAGAATGAAACAAATTTATATCATTCTATTAGTCGTGACACAAAGCATAGACTTTAAGCCGTACGTAAGCCTCTTGTGGTTCAAAGAGAGGCTTCAGCCTTAATATCCTATTAAGACATTGGTTGCTGGCGATAGATATAAAGAACTCCTTATGGAAAGTTTTGGGATTGCTTGCCTACGAAAGAAAACCTTCAAACTCTCTCTACCAAACCAAGAGAACAGAAAGAAGACCAACACATTTCCTGACCATCGTAACTCGTGAACCCTATCTTAAAACAGAATCCTCAACAACAAATCAGCAATAAAATCAAATGTGCCCAATAAAAATGAAGATAGTTCTGAAGATTCTGAAATGCAAGACAAAGGAGCTTTTTATAATAACCGTAAGGTGTTTGAAAGTCAAAGAGAAGGTTCTCTTAAAACACGTTATGTTATGATTTTTCTTTTTCCTTTTCTTTTTTGGAGAATGGGTTATTAATGTCTGCATAAGAGAACATTTATACAACTAATTCCTAAGATAACTTTTTCATGCCTAATCCGTAAGAAGGCAACTGCTAACAGAATTAGAGAATATAGACCCACTAGCCTTGTTAAAAATGCTTAAATAATTCTCTCTAAAGTCTTGGCCAATAATCATATAGGAGCTGTCTGGAACTATTACAAAGTGTCGTCAACTCTATTATAATTGCCAATGAGGCAGTTGACGATGACCTAAGAAGAAGAAAGAAGGCTTGGATGGTGAAAATACATCTTGACAAAGCATTTTTTTTTCATCATATAAAGGGTGGGCCAAAGGAGGTTGAAATCTACTTGTTTGAAGGAAAGTACAGATGCCTTGGCCTATAATCCCAAATAGTACAAGGACAGTTGTCTTTTAGATTTGAATTTTCTTCTTAAAATCCTTCGGCTAGAAGATTTTAGTGAGAAATGGATGAGATGGATTCTGTTAGAAGGCTTCTAAACATGAGTGGAAACCCCCAATTTATGGATGCTATTCATTTCTTCGCCTCTGATGATGGAAACCTCAAAAATTTGTTTATGATCTTGAATATATCTGAGAGCCTTCCACGTCTATGATCTTTTACTGAGATTCAGACGTGAAGGAGAGTCCAAAGTTTTTAACATTTTCTTGACGTCAATATTCTGTTTGGAAGTTGATATTCAAAATTAGTCTAACTAGTTTATCTTTTTGTTCCATCTTTAATGAGAGGGTTCTCATATTTTGATGTTTGTTTTCCCGCAGCTAAGCAATTCTTGTGTAGATGATCTGCTGTGTGGTGCAACAGAAAAAAACTGATGCGTTTTGCTGATCCTGTCCAGGGCGTTAAACGAAATGTATTTTTCCTTTTTATGTTTTCTTCTTTTCGAACAGGGTTAACATTAGAAACGTGTAAAAACTTTAATTAGATGTCGTCGAATTGACATTACTTTTGTTAACTTGCTATTTCTACGTTCCTGATATGAATTGGATTTTAACAATTTGTTTAAGATCAAGTTTAACTAGCTCATCTGTGGAGCGTTATGTTAGATTTTGGGCAGGGAGATAAAAAGAGAAGAACAAAGAGATTTCAGTATTCATAGTCCTTCCAAGTCTCCTCTCACTAATAGAGTATCTAATTCCGCTTCTCTTTTTACTCTCTTTCATTTTGACACTGAG

mRNA sequence

TCTTTAAAATGGCAGAGGTGGAAGCCGAGAAACGAATCGTGAAGGCCTCTGTTACCTTATCTCAACTCTTTTCGGAGTTCTTTGTGTTTCTTTTCTTCTTTTTCTTCCTTCCTTCCATTTTCATCACTTCAAATATTTCTTCACATTCCCCAAATCTCCTCATTCTTCTTCCATTTGGGTCAACCGCCGCCGTCCCCGGCCGATGGACACCAACAATCAAGCTCAATCCTCTCCCTACCCTCCTCCTCAGGCCCCTGTTCCGGCCCCTCCCTTCCACCACCTCCTTCAGCAGCAACAACAACAGCTTCAGATGTTCTGGTCCTTCCAACGCCAAGAAATCGAACAGGTTAACGATTTTAAAAACCACCAGCTTCCTCTTGCCCGCATTAAGAAGATCATGAAAGCCGATGAGGACGTTCGTATGATCTCTGCCGAGGCCCCCATTTTGTTCGCTAAGGCTTGTGAGCTTTTTATTCTTGAACTCACTATTAGGTCATGGCTCCACGCCGAAGAGAATAAGAGGCGGACATTGCAGAAGAATGATATTGCTGCTGCTATCACGAGGACCGATATCTTTGATTTCTTAGTTGATATTGTTCCTAGGGATGAGATCAAGGACGAGGCTGGGTTGGGAGGTATGGTTGGAGCCACTGCTAGTGGAGTTCCGTACTATTATCCGCCTATGGGTCAACCGGCGGGGGCTCCCGGGGGAATGATGATTGGGAGACCGGCAATGGATCCCACTGGAGTTTACGCTCAGCCGCCGTCCCAGGCCTGGCAATCCGTGTGGCAGACCGCTGCTGAGGATGGTTCTTACGCGAGTGGGGCCAGCAGCGGGCAGGGTAATCTTGATGGTCAGAGCTAAGCAATTCTTGTGTAGATGATCTGCTGTGTGGTGCAACAGAAAAAAACTGATGCGTTTTGCTGATCCTGTCCAGGGCGTTAAACGAAATGTATTTTTCCTTTTTATGTTTTCTTCTTTTCGAACAGGGTTAACATTAGAAACGTGTAAAAACTTTAATTAGATGTCGTCGAATTGACATTACTTTTGTTAACTTGCTATTTCTACGTTCCTGATATGAATTGGATTTTAACAATTTGTTTAAGATCAAGTTTAACTAGCTCATCTGTGGAGCGTTATGTTAGATTTTGGGCAGGGAGATAAAAAGAGAAGAACAAAGAGATTTCAGTATTCATAGTCCTTCCAAGTCTCCTCTCACTAATAGAGTATCTAATTCCGCTTCTCTTTTTACTCTCTTTCATTTTGACACTGAG

Coding sequence (CDS)

ATGGACACCAACAATCAAGCTCAATCCTCTCCCTACCCTCCTCCTCAGGCCCCTGTTCCGGCCCCTCCCTTCCACCACCTCCTTCAGCAGCAACAACAACAGCTTCAGATGTTCTGGTCCTTCCAACGCCAAGAAATCGAACAGGTTAACGATTTTAAAAACCACCAGCTTCCTCTTGCCCGCATTAAGAAGATCATGAAAGCCGATGAGGACGTTCGTATGATCTCTGCCGAGGCCCCCATTTTGTTCGCTAAGGCTTGTGAGCTTTTTATTCTTGAACTCACTATTAGGTCATGGCTCCACGCCGAAGAGAATAAGAGGCGGACATTGCAGAAGAATGATATTGCTGCTGCTATCACGAGGACCGATATCTTTGATTTCTTAGTTGATATTGTTCCTAGGGATGAGATCAAGGACGAGGCTGGGTTGGGAGGTATGGTTGGAGCCACTGCTAGTGGAGTTCCGTACTATTATCCGCCTATGGGTCAACCGGCGGGGGCTCCCGGGGGAATGATGATTGGGAGACCGGCAATGGATCCCACTGGAGTTTACGCTCAGCCGCCGTCCCAGGCCTGGCAATCCGTGTGGCAGACCGCTGCTGAGGATGGTTCTTACGCGAGTGGGGCCAGCAGCGGGCAGGGTAATCTTGATGGTCAGAGCTAA

Protein sequence

MDTNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAAEDGSYASGASSGQGNLDGQS

Homology

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BLAST of Cmc02g0059251 vs. NCBI nr
Match: XP_008464428.1 (PREDICTED: nuclear transcription factor Y subunit C-1 [Cucumis melo])

HSP 1 Score: 434.9 bits (1117), Expect = 4.2e-118
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 1   MDTNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA 60
           MDTNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA
Sbjct: 1   MDTNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA 60

Query: 61  RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT 120
           RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT
Sbjct: 61  RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT 120

Query: 121 RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDP 180
           RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDP
Sbjct: 121 RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDP 180

Query: 181 TGVYAQPPSQAWQSVWQTAAEDGSYASGASSGQGNLDGQS 221
           TGVYAQPPSQAWQSVWQTAAEDGSYASGASSGQGNLDGQS
Sbjct: 181 TGVYAQPPSQAWQSVWQTAAEDGSYASGASSGQGNLDGQS 220

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BLAST of Cmc02g0059251 vs. NCBI nr
Match: KAA0057769.1 (nuclear transcription factor Y subunit C-1 [Cucumis melo var. makuwa] >TYJ98450.1 nuclear transcription factor Y subunit C-1 [Cucumis melo var. makuwa])

HSP 1 Score: 433.7 bits (1114), Expect = 9.4e-118
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 1   MDTNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA 60
           MDTNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA
Sbjct: 1   MDTNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA 60

Query: 61  RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT 120
           RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT
Sbjct: 61  RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT 120

Query: 121 RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDP 180
           RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDP
Sbjct: 121 RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDP 180

Query: 181 TGVYAQPPSQAWQSVWQTAAEDGSYASGASSGQGNLDGQ 220
           TGVYAQPPSQAWQSVWQTAAEDGSYASGASSGQGNLDGQ
Sbjct: 181 TGVYAQPPSQAWQSVWQTAAEDGSYASGASSGQGNLDGQ 219

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BLAST of Cmc02g0059251 vs. NCBI nr
Match: XP_004138046.1 (nuclear transcription factor Y subunit C-1 [Cucumis sativus] >KGN63480.1 hypothetical protein Csa_013346 [Cucumis sativus])

HSP 1 Score: 433.0 bits (1112), Expect = 1.6e-117
Identity = 219/220 (99.55%), Postives = 219/220 (99.55%), Query Frame = 0


Query: 1   MDTNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA 60
           MD NNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA
Sbjct: 1   MDANNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA 60

Query: 61  RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT 120
           RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT
Sbjct: 61  RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT 120

Query: 121 RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDP 180
           RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDP
Sbjct: 121 RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDP 180

Query: 181 TGVYAQPPSQAWQSVWQTAAEDGSYASGASSGQGNLDGQS 221
           TGVYAQPPSQAWQSVWQTAAEDGSYASGASSGQGNLDGQS
Sbjct: 181 TGVYAQPPSQAWQSVWQTAAEDGSYASGASSGQGNLDGQS 220

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BLAST of Cmc02g0059251 vs. NCBI nr
Match: XP_038878995.1 (nuclear transcription factor Y subunit C-1 [Benincasa hispida])

HSP 1 Score: 431.8 bits (1109), Expect = 3.6e-117
Identity = 218/220 (99.09%), Postives = 218/220 (99.09%), Query Frame = 0


Query: 1   MDTNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA 60
           MDTNNQ QSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA
Sbjct: 1   MDTNNQTQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA 60

Query: 61  RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT 120
           RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT
Sbjct: 61  RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT 120

Query: 121 RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDP 180
           RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDP
Sbjct: 121 RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDP 180

Query: 181 TGVYAQPPSQAWQSVWQTAAEDGSYASGASSGQGNLDGQS 221
           TGVYAQPPSQAWQSVWQTAAEDGSYASG SSGQGNLDGQS
Sbjct: 181 TGVYAQPPSQAWQSVWQTAAEDGSYASGGSSGQGNLDGQS 220

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BLAST of Cmc02g0059251 vs. NCBI nr
Match: XP_022134838.1 (nuclear transcription factor Y subunit C-1-like [Momordica charantia])

HSP 1 Score: 430.3 bits (1105), Expect = 1.0e-116
Identity = 217/220 (98.64%), Postives = 219/220 (99.55%), Query Frame = 0


Query: 1   MDTNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA 60
           M++NNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA
Sbjct: 1   MESNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA 60

Query: 61  RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT 120
           RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT
Sbjct: 61  RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT 120

Query: 121 RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDP 180
           RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDP
Sbjct: 121 RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDP 180

Query: 181 TGVYAQPPSQAWQSVWQTAAEDGSYASGASSGQGNLDGQS 221
           TGVYAQPPSQAWQSVWQTAAEDGSYASG SSGQGNLDGQS
Sbjct: 181 TGVYAQPPSQAWQSVWQTAAEDGSYASGGSSGQGNLDGQS 220

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BLAST of Cmc02g0059251 vs. ExPASy Swiss-Prot
Match: Q9SMP0 (Nuclear transcription factor Y subunit C-1 OS=Arabidopsis thaliana OX=3702 GN=NFYC1 PE=1 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 6.8e-95
Identity = 192/234 (82.05%), Postives = 200/234 (85.47%), Query Frame = 0


Query: 1   MDTNNQ-----AQSSPYPPPQAPVPA----PPFHHLLQQQQQQLQMFWSFQRQEIEQVND 60
           MDTNNQ     A   P PPP   + A      +HHLLQQQQQQLQ+FW++QRQEIEQVND
Sbjct: 1   MDTNNQQPPPSAAGIPPPPPGTTISAAGGGASYHHLLQQQQQQLQLFWTYQRQEIEQVND 60

Query: 61  FKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQ 120
           FKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQ
Sbjct: 61  FKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQ 120

Query: 121 KNDIAAAITRTDIFDFLVDIVPRDEIKDEAGL--GGMVGA-TASGVPYYYPPMGQPAGAP 180
           KNDIAAAITRTDIFDFLVDIVPRDEIKDEA +  GGMV A TASGVPYYYPPMGQPAG P
Sbjct: 121 KNDIAAAITRTDIFDFLVDIVPRDEIKDEAAVLGGGMVVAPTASGVPYYYPPMGQPAG-P 180

Query: 181 GGMMIGRPAMDPTGVYAQPPSQAWQSVWQTA---AEDGSYASGASSGQGNLDGQ 220
           GGMMIGRPAMDP GVY QPPSQAWQSVWQT+    +D SY SG SSGQGNLDGQ
Sbjct: 181 GGMMIGRPAMDPNGVYVQPPSQAWQSVWQTSTGTGDDVSYGSGGSSGQGNLDGQ 233

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BLAST of Cmc02g0059251 vs. ExPASy Swiss-Prot
Match: Q9FMV5 (Nuclear transcription factor Y subunit C-4 OS=Arabidopsis thaliana OX=3702 GN=NFYC4 PE=1 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 1.0e-90
Identity = 186/246 (75.61%), Postives = 196/246 (79.67%), Query Frame = 0


Query: 2   DTNNQAQSSP---YPPPQA---PVPAPP-------------FHHLLQQQQQQLQMFWSFQ 61
           + NN  Q  P   YPP  A    +P PP             +HHLLQQQQQQLQMFW++Q
Sbjct: 5   NNNNNQQPPPTSVYPPGSAVTTVIPPPPSGSASIVTGGGATYHHLLQQQQQQLQMFWTYQ 64

Query: 62  RQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHA 121
           RQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHA
Sbjct: 65  RQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHA 124

Query: 122 EENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDE------AGLGGMVGATASGVPY 181
           EENKRRTLQKNDIAAAITRTDIFDFLVDIVPR+EIK+E       G GGMV   ASGVPY
Sbjct: 125 EENKRRTLQKNDIAAAITRTDIFDFLVDIVPREEIKEEEDAASALGGGGMVAPAASGVPY 184

Query: 182 YYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA---EDGSYASGASSGQ 220
           YYPPMGQPA  PGGMMIGRPAMDP+GVYAQPPSQAWQSVWQ +A   +D SY SG SSG 
Sbjct: 185 YYPPMGQPA-VPGGMMIGRPAMDPSGVYAQPPSQAWQSVWQNSAGGGDDVSYGSGGSSGH 244

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BLAST of Cmc02g0059251 vs. ExPASy Swiss-Prot
Match: A6BLW4 (Nuclear transcription factor Y subunit C-2 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYC2 PE=1 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.0e-58
Identity = 135/221 (61.09%), Postives = 151/221 (68.33%), Query Frame = 0


Query: 11  PYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQ--VNDFKNHQLPLARIKKIMKA 70
           P  P     PA P HHLLQQQQ QLQ FW++QRQE E+   +DFKNHQLPLARIKKIMKA
Sbjct: 22  PGVPGAGGPPAVPHHHLLQQQQAQLQAFWAYQRQEAERASASDFKNHQLPLARIKKIMKA 81

Query: 71  DEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFL 130
           DEDVRMISAEAP+LFAKACELFILELTIRSWLHAEENKRRTLQ+ND+AAAI RTD+FDFL
Sbjct: 82  DEDVRMISAEAPVLFAKACELFILELTIRSWLHAEENKRRTLQRNDVAAAIARTDVFDFL 141

Query: 131 VDIVPRDEIKDEAG------LGGMVGAT-----ASGVPYYYPPMGQPAGAPGGMMIGRPA 190
           VDIVPR+E K+E G       GG  GA      A+G+PYYYPPMGQPA       +  PA
Sbjct: 142 VDIVPREEAKEEPGSALGFAAGGPAGAVGAAGPAAGLPYYYPPMGQPAPMMPAWHV--PA 201

Query: 191 MDPTGVYAQPPSQAWQSVWQTAAEDGSYASGASSGQGNLDG 219
            DP          AWQ       + G+  S +  GQ    G
Sbjct: 202 WDP----------AWQQGAAPDVDQGAAGSFSEEGQQGFAG 230

[Close]

BLAST of Cmc02g0059251 vs. ExPASy Swiss-Prot
Match: Q9ZVL3 (Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana OX=3702 GN=NFYC3 PE=1 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 4.9e-53
Identity = 116/178 (65.17%), Postives = 133/178 (74.72%), Query Frame = 0


Query: 22  PPFHHLLQQQQ----QQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISA 81
           P +H + QQQQ    QQLQ FW  Q +EIE+  DFKNH LPLARIKKIMKADEDVRMISA
Sbjct: 32  PAYHQIHQQQQQQLTQQLQSFWETQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISA 91

Query: 82  EAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEI 141
           EAP++FA+ACE+FILELT+RSW H EENKRRTLQKNDIAAA+TRTDIFDFLVDIVPR+++
Sbjct: 92  EAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDL 151

Query: 142 KDEA-GLGGMVGATASGVPY-YYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQ 194
           +DE  G  G   ATA+G PY Y PP   P G P GM++G P   P   Y   P   WQ
Sbjct: 152 RDEVLGGVGAEAATAAGYPYGYLPPGTAPIGNP-GMVMGNPGAYPPNPYMGQP--MWQ 206

[Close]

BLAST of Cmc02g0059251 vs. ExPASy Swiss-Prot
Match: Q8LCG7 (Nuclear transcription factor Y subunit C-2 OS=Arabidopsis thaliana OX=3702 GN=NFYC2 PE=1 SV=2)

HSP 1 Score: 206.5 bits (524), Expect = 3.2e-52
Identity = 103/137 (75.18%), Postives = 117/137 (85.40%), Query Frame = 0


Query: 25  HHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFA 84
           HH  QQQQQQLQMFW+ Q QEIE   DFKNH LPLARIKKIMKADEDVRMISAEAP++FA
Sbjct: 45  HHHQQQQQQQLQMFWANQMQEIEHTTDFKNHTLPLARIKKIMKADEDVRMISAEAPVIFA 104

Query: 85  KACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLG 144
           KACE+FILELT+R+W+H EENKRRTLQKNDIAAAI+RTD+FDFLVDI+PRDE+K+E GLG
Sbjct: 105 KACEMFILELTLRAWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEE-GLG 164

Query: 145 ---GMVGATASGVPYYY 159
              G + +     PYYY
Sbjct: 165 VTKGTIPSVVGSPPYYY 180

[Close]

BLAST of Cmc02g0059251 vs. ExPASy TrEMBL
Match: A0A1S3CLW7 (nuclear transcription factor Y subunit C-1 OS=Cucumis melo OX=3656 GN=LOC103502320 PE=4 SV=1)

HSP 1 Score: 434.9 bits (1117), Expect = 2.0e-118
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 1   MDTNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA 60
           MDTNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA
Sbjct: 1   MDTNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA 60

Query: 61  RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT 120
           RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT
Sbjct: 61  RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT 120

Query: 121 RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDP 180
           RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDP
Sbjct: 121 RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDP 180

Query: 181 TGVYAQPPSQAWQSVWQTAAEDGSYASGASSGQGNLDGQS 221
           TGVYAQPPSQAWQSVWQTAAEDGSYASGASSGQGNLDGQS
Sbjct: 181 TGVYAQPPSQAWQSVWQTAAEDGSYASGASSGQGNLDGQS 220

[Close]

BLAST of Cmc02g0059251 vs. ExPASy TrEMBL
Match: A0A5D3BF73 (Nuclear transcription factor Y subunit C-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00510 PE=4 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 4.5e-118
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 1   MDTNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA 60
           MDTNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA
Sbjct: 1   MDTNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA 60

Query: 61  RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT 120
           RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT
Sbjct: 61  RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT 120

Query: 121 RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDP 180
           RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDP
Sbjct: 121 RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDP 180

Query: 181 TGVYAQPPSQAWQSVWQTAAEDGSYASGASSGQGNLDGQ 220
           TGVYAQPPSQAWQSVWQTAAEDGSYASGASSGQGNLDGQ
Sbjct: 181 TGVYAQPPSQAWQSVWQTAAEDGSYASGASSGQGNLDGQ 219

[Close]

BLAST of Cmc02g0059251 vs. ExPASy TrEMBL
Match: A0A0A0LNK7 (CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G001515 PE=4 SV=1)

HSP 1 Score: 433.0 bits (1112), Expect = 7.7e-118
Identity = 219/220 (99.55%), Postives = 219/220 (99.55%), Query Frame = 0


Query: 1   MDTNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA 60
           MD NNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA
Sbjct: 1   MDANNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA 60

Query: 61  RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT 120
           RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT
Sbjct: 61  RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT 120

Query: 121 RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDP 180
           RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDP
Sbjct: 121 RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDP 180

Query: 181 TGVYAQPPSQAWQSVWQTAAEDGSYASGASSGQGNLDGQS 221
           TGVYAQPPSQAWQSVWQTAAEDGSYASGASSGQGNLDGQS
Sbjct: 181 TGVYAQPPSQAWQSVWQTAAEDGSYASGASSGQGNLDGQS 220

[Close]

BLAST of Cmc02g0059251 vs. ExPASy TrEMBL
Match: A0A6J1C352 (nuclear transcription factor Y subunit C-1-like OS=Momordica charantia OX=3673 GN=LOC111007012 PE=4 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 5.0e-117
Identity = 217/220 (98.64%), Postives = 219/220 (99.55%), Query Frame = 0


Query: 1   MDTNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA 60
           M++NNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA
Sbjct: 1   MESNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA 60

Query: 61  RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT 120
           RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT
Sbjct: 61  RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT 120

Query: 121 RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDP 180
           RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDP
Sbjct: 121 RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDP 180

Query: 181 TGVYAQPPSQAWQSVWQTAAEDGSYASGASSGQGNLDGQS 221
           TGVYAQPPSQAWQSVWQTAAEDGSYASG SSGQGNLDGQS
Sbjct: 181 TGVYAQPPSQAWQSVWQTAAEDGSYASGGSSGQGNLDGQS 220

[Close]

BLAST of Cmc02g0059251 vs. ExPASy TrEMBL
Match: A0A6J1JJG4 (nuclear transcription factor Y subunit C-1 OS=Cucurbita maxima OX=3661 GN=LOC111484989 PE=4 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 4.7e-115
Identity = 214/220 (97.27%), Postives = 216/220 (98.18%), Query Frame = 0


Query: 1   MDTNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA 60
           M++NNQAQSSPYPPPQAPVPAPP HHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA
Sbjct: 1   MESNNQAQSSPYPPPQAPVPAPPLHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA 60

Query: 61  RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT 120
           RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT
Sbjct: 61  RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT 120

Query: 121 RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDP 180
           RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAG PGGMMIGRPAMDP
Sbjct: 121 RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGPPGGMMIGRPAMDP 180

Query: 181 TGVYAQPPSQAWQSVWQTAAEDGSYASGASSGQGNLDGQS 221
           TGVYAQPPSQAWQSVWQ AAEDGSYASG SSGQGNLDGQS
Sbjct: 181 TGVYAQPPSQAWQSVWQPAAEDGSYASGGSSGQGNLDGQS 220

[Close]

BLAST of Cmc02g0059251 vs. TAIR 10
Match: AT3G48590.1 (nuclear factor Y, subunit C1 )

HSP 1 Score: 348.2 bits (892), Expect = 4.8e-96
Identity = 192/234 (82.05%), Postives = 200/234 (85.47%), Query Frame = 0


Query: 1   MDTNNQ-----AQSSPYPPPQAPVPA----PPFHHLLQQQQQQLQMFWSFQRQEIEQVND 60
           MDTNNQ     A   P PPP   + A      +HHLLQQQQQQLQ+FW++QRQEIEQVND
Sbjct: 1   MDTNNQQPPPSAAGIPPPPPGTTISAAGGGASYHHLLQQQQQQLQLFWTYQRQEIEQVND 60

Query: 61  FKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQ 120
           FKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQ
Sbjct: 61  FKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQ 120

Query: 121 KNDIAAAITRTDIFDFLVDIVPRDEIKDEAGL--GGMVGA-TASGVPYYYPPMGQPAGAP 180
           KNDIAAAITRTDIFDFLVDIVPRDEIKDEA +  GGMV A TASGVPYYYPPMGQPAG P
Sbjct: 121 KNDIAAAITRTDIFDFLVDIVPRDEIKDEAAVLGGGMVVAPTASGVPYYYPPMGQPAG-P 180

Query: 181 GGMMIGRPAMDPTGVYAQPPSQAWQSVWQTA---AEDGSYASGASSGQGNLDGQ 220
           GGMMIGRPAMDP GVY QPPSQAWQSVWQT+    +D SY SG SSGQGNLDGQ
Sbjct: 181 GGMMIGRPAMDPNGVYVQPPSQAWQSVWQTSTGTGDDVSYGSGGSSGQGNLDGQ 233

[Close]

BLAST of Cmc02g0059251 vs. TAIR 10
Match: AT5G63470.1 (nuclear factor Y, subunit C4 )

HSP 1 Score: 334.3 bits (856), Expect = 7.2e-92
Identity = 186/246 (75.61%), Postives = 196/246 (79.67%), Query Frame = 0


Query: 2   DTNNQAQSSP---YPPPQA---PVPAPP-------------FHHLLQQQQQQLQMFWSFQ 61
           + NN  Q  P   YPP  A    +P PP             +HHLLQQQQQQLQMFW++Q
Sbjct: 5   NNNNNQQPPPTSVYPPGSAVTTVIPPPPSGSASIVTGGGATYHHLLQQQQQQLQMFWTYQ 64

Query: 62  RQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHA 121
           RQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHA
Sbjct: 65  RQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHA 124

Query: 122 EENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDE------AGLGGMVGATASGVPY 181
           EENKRRTLQKNDIAAAITRTDIFDFLVDIVPR+EIK+E       G GGMV   ASGVPY
Sbjct: 125 EENKRRTLQKNDIAAAITRTDIFDFLVDIVPREEIKEEEDAASALGGGGMVAPAASGVPY 184

Query: 182 YYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA---EDGSYASGASSGQ 220
           YYPPMGQPA  PGGMMIGRPAMDP+GVYAQPPSQAWQSVWQ +A   +D SY SG SSG 
Sbjct: 185 YYPPMGQPA-VPGGMMIGRPAMDPSGVYAQPPSQAWQSVWQNSAGGGDDVSYGSGGSSGH 244

[Close]

BLAST of Cmc02g0059251 vs. TAIR 10
Match: AT5G63470.2 (nuclear factor Y, subunit C4 )

HSP 1 Score: 334.3 bits (856), Expect = 7.2e-92
Identity = 186/246 (75.61%), Postives = 196/246 (79.67%), Query Frame = 0


Query: 2   DTNNQAQSSP---YPPPQA---PVPAPP-------------FHHLLQQQQQQLQMFWSFQ 61
           + NN  Q  P   YPP  A    +P PP             +HHLLQQQQQQLQMFW++Q
Sbjct: 5   NNNNNQQPPPTSVYPPGSAVTTVIPPPPSGSASIVTGGGATYHHLLQQQQQQLQMFWTYQ 64

Query: 62  RQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHA 121
           RQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHA
Sbjct: 65  RQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHA 124

Query: 122 EENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDE------AGLGGMVGATASGVPY 181
           EENKRRTLQKNDIAAAITRTDIFDFLVDIVPR+EIK+E       G GGMV   ASGVPY
Sbjct: 125 EENKRRTLQKNDIAAAITRTDIFDFLVDIVPREEIKEEEDAASALGGGGMVAPAASGVPY 184

Query: 182 YYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAA---EDGSYASGASSGQ 220
           YYPPMGQPA  PGGMMIGRPAMDP+GVYAQPPSQAWQSVWQ +A   +D SY SG SSG 
Sbjct: 185 YYPPMGQPA-VPGGMMIGRPAMDPSGVYAQPPSQAWQSVWQNSAGGGDDVSYGSGGSSGH 244

[Close]

BLAST of Cmc02g0059251 vs. TAIR 10
Match: AT1G54830.2 (nuclear factor Y, subunit C3 )

HSP 1 Score: 209.1 bits (531), Expect = 3.5e-54
Identity = 116/178 (65.17%), Postives = 133/178 (74.72%), Query Frame = 0


Query: 22  PPFHHLLQQQQ----QQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISA 81
           P +H + QQQQ    QQLQ FW  Q +EIE+  DFKNH LPLARIKKIMKADEDVRMISA
Sbjct: 32  PAYHQIHQQQQQQLTQQLQSFWETQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISA 91

Query: 82  EAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEI 141
           EAP++FA+ACE+FILELT+RSW H EENKRRTLQKNDIAAA+TRTDIFDFLVDIVPR+++
Sbjct: 92  EAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDL 151

Query: 142 KDEA-GLGGMVGATASGVPY-YYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQ 194
           +DE  G  G   ATA+G PY Y PP   P G P GM++G P   P   Y   P   WQ
Sbjct: 152 RDEVLGGVGAEAATAAGYPYGYLPPGTAPIGNP-GMVMGNPGAYPPNPYMGQP--MWQ 206

[Close]

BLAST of Cmc02g0059251 vs. TAIR 10
Match: AT1G54830.1 (nuclear factor Y, subunit C3 )

HSP 1 Score: 209.1 bits (531), Expect = 3.5e-54
Identity = 116/178 (65.17%), Postives = 133/178 (74.72%), Query Frame = 0


Query: 22  PPFHHLLQQQQ----QQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISA 81
           P +H + QQQQ    QQLQ FW  Q +EIE+  DFKNH LPLARIKKIMKADEDVRMISA
Sbjct: 32  PAYHQIHQQQQQQLTQQLQSFWETQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISA 91

Query: 82  EAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEI 141
           EAP++FA+ACE+FILELT+RSW H EENKRRTLQKNDIAAA+TRTDIFDFLVDIVPR+++
Sbjct: 92  EAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDL 151

Query: 142 KDEA-GLGGMVGATASGVPY-YYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQ 194
           +DE  G  G   ATA+G PY Y PP   P G P GM++G P   P   Y   P   WQ
Sbjct: 152 RDEVLGGVGAEAATAAGYPYGYLPPGTAPIGNP-GMVMGNPGAYPPNPYMGQP--MWQ 206

The following BLAST results are available for this feature:

BLAST of Cmc02g0059251 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008464428.1	4.2e-118	100.00	PREDICTED: nuclear transcription factor Y subunit C-1 [Cucumis melo]	[more]
KAA0057769.1	9.4e-118	100.00	nuclear transcription factor Y subunit C-1 [Cucumis melo var. makuwa] >TYJ98450....	[more]
XP_004138046.1	1.6e-117	99.55	nuclear transcription factor Y subunit C-1 [Cucumis sativus] >KGN63480.1 hypothe...	[more]
XP_038878995.1	3.6e-117	99.09	nuclear transcription factor Y subunit C-1 [Benincasa hispida]	[more]
XP_022134838.1	1.0e-116	98.64	nuclear transcription factor Y subunit C-1-like [Momordica charantia]	[more]

BLAST of Cmc02g0059251 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SMP0	6.8e-95	82.05	Nuclear transcription factor Y subunit C-1 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9FMV5	1.0e-90	75.61	Nuclear transcription factor Y subunit C-4 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
A6BLW4	1.0e-58	61.09	Nuclear transcription factor Y subunit C-2 OS=Oryza sativa subsp. japonica OX=39...	[more]
Q9ZVL3	4.9e-53	65.17	Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q8LCG7	3.2e-52	75.18	Nuclear transcription factor Y subunit C-2 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of Cmc02g0059251 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CLW7	2.0e-118	100.00	nuclear transcription factor Y subunit C-1 OS=Cucumis melo OX=3656 GN=LOC1035023...	[more]
A0A5D3BF73	4.5e-118	100.00	Nuclear transcription factor Y subunit C-1 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A0A0LNK7	7.7e-118	99.55	CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G0015...	[more]
A0A6J1C352	5.0e-117	98.64	nuclear transcription factor Y subunit C-1-like OS=Momordica charantia OX=3673 G...	[more]
A0A6J1JJG4	4.7e-115	97.27	nuclear transcription factor Y subunit C-1 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of Cmc02g0059251 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G48590.1	4.8e-96	82.05	nuclear factor Y, subunit C1	[more]
AT5G63470.1	7.2e-92	75.61	nuclear factor Y, subunit C4	[more]
AT5G63470.2	7.2e-92	75.61	nuclear factor Y, subunit C4	[more]
AT1G54830.2	3.5e-54	65.17	nuclear factor Y, subunit C3	[more]
AT1G54830.1	3.5e-54	65.17	nuclear factor Y, subunit C3	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 24..134 e-value: 4.4E-46 score: 157.9
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 30..128
IPR003958	Transcription factor CBF/NF-Y/archaeal histone domain	PFAM	PF00808	CBFD_NFYB_HMF	coord: 56..119 e-value: 2.2E-17 score: 63.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR10252	HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED	coord: 2..220
None	No IPR available	PANTHER	PTHR10252:SF107	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-4	coord: 2..220

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc02g0059251.1	Cmc02g0059251.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific
molecular_function	GO:0046982	protein heterodimerization activity