Homology
BLAST of Cmc02g0058601 vs. NCBI nr
Match:
XP_008464511.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Cucumis melo] >TYJ98503.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 822.4 bits (2123), Expect = 1.8e-234
Identity = 406/407 (99.75%), Postives = 407/407 (100.00%), Query Frame = 0
Query: 26 QLGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKA 85
+LGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKA
Sbjct: 217 ELGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKA 276
Query: 86 FWGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLR 145
FWGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLR
Sbjct: 277 FWGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLR 336
Query: 146 TIAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGY 205
TIAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGY
Sbjct: 337 TIAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGY 396
Query: 206 EPDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALV 265
EPDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALV
Sbjct: 397 EPDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALV 456
Query: 266 CFAKMIEKNCDPDADLLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNL 325
CFAKMIEKNCDPDADLLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNL
Sbjct: 457 CFAKMIEKNCDPDADLLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNL 516
Query: 326 LEVRKLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYL 385
LEVRKLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYL
Sbjct: 517 LEVRKLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYL 576
Query: 386 HIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESKTTGAT 433
HIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESKTTGAT
Sbjct: 577 HIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESKTTGAT 623
BLAST of Cmc02g0058601 vs. NCBI nr
Match:
XP_008464511.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Cucumis melo] >TYJ98503.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 53.5 bits (127), Expect = 5.2e-03
Identity = 26/27 (96.30%), Postives = 27/27 (100.00%), Query Frame = 0
Query: 1 MTRRNAIFTSLRLANSFFSTRSRYPQL 28
MTRRNAIFTSLRLANSFFSTRSRYPQ+
Sbjct: 1 MTRRNAIFTSLRLANSFFSTRSRYPQV 27
HSP 2 Score: 822.4 bits (2123), Expect = 1.8e-234
Identity = 406/407 (99.75%), Postives = 407/407 (100.00%), Query Frame = 0
Query: 26 QLGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKA 85
+LGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKA
Sbjct: 217 ELGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKA 276
Query: 86 FWGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLR 145
FWGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLR
Sbjct: 277 FWGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLR 336
Query: 146 TIAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGY 205
TIAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGY
Sbjct: 337 TIAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGY 396
Query: 206 EPDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALV 265
EPDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALV
Sbjct: 397 EPDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALV 456
Query: 266 CFAKMIEKNCDPDADLLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNL 325
CFAKMIEKNCDPDADLLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNL
Sbjct: 457 CFAKMIEKNCDPDADLLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNL 516
Query: 326 LEVRKLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYL 385
LEVRKLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYL
Sbjct: 517 LEVRKLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYL 576
Query: 386 HIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESKTTGAT 433
HIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESKTTGAT
Sbjct: 577 HIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESKTTGAT 623
BLAST of Cmc02g0058601 vs. NCBI nr
Match:
KAA0057819.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 53.5 bits (127), Expect = 5.2e-03
Identity = 26/27 (96.30%), Postives = 27/27 (100.00%), Query Frame = 0
Query: 1 MTRRNAIFTSLRLANSFFSTRSRYPQL 28
MTRRNAIFTSLRLANSFFSTRSRYPQ+
Sbjct: 1 MTRRNAIFTSLRLANSFFSTRSRYPQV 27
HSP 2 Score: 776.2 bits (2003), Expect = 1.5e-220
Identity = 378/407 (92.87%), Postives = 400/407 (98.28%), Query Frame = 0
Query: 26 QLGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKA 85
+LGIALSDNFVIRVLKELRNSPLKALSFF+WVGCRPDYDHNTVSYNAIARVL R+DSI+A
Sbjct: 217 ELGIALSDNFVIRVLKELRNSPLKALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEA 276
Query: 86 FWGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLR 145
FWGVIEEMK+A+ +IDIDTYIKISRQFQKSKMMG+AVKLYELMMDGPYKPSL DCS+LLR
Sbjct: 277 FWGVIEEMKHANHEIDIDTYIKISRQFQKSKMMGEAVKLYELMMDGPYKPSLQDCSVLLR 336
Query: 146 TIAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGY 205
TIAASDNPDLSLVYRVAKKFEA+GYSLSKA+YDGIHRSLTS GKFDDAE+IVKSMRNAGY
Sbjct: 337 TIAASDNPDLSLVYRVAKKFEATGYSLSKAMYDGIHRSLTSTGKFDDAENIVKSMRNAGY 396
Query: 206 EPDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALV 265
EPDNVT+SQLVFGLCKARRL+EAR+VLDEMEAQGCIPDIKTWT+LIQGHCNAN+LD+ALV
Sbjct: 397 EPDNVTYSQLVFGLCKARRLEEARKVLDEMEAQGCIPDIKTWTILIQGHCNANELDIALV 456
Query: 266 CFAKMIEKNCDPDADLLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNL 325
CFAKMIEKNCDPDADLLDVLI+GFL+QKKL+GAYQLLIELTNKAHVRPWQATYK LIKNL
Sbjct: 457 CFAKMIEKNCDPDADLLDVLISGFLNQKKLNGAYQLLIELTNKAHVRPWQATYKQLIKNL 516
Query: 326 LEVRKLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYL 385
LEVRKLEEA+ALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYL
Sbjct: 517 LEVRKLEEAIALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYL 576
Query: 386 HIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESKTTGAT 433
HIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAES TT AT
Sbjct: 577 HIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESNTTAAT 623
BLAST of Cmc02g0058601 vs. NCBI nr
Match:
XP_004138087.1 (pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Cucumis sativus] >KGN63535.1 hypothetical protein Csa_013352 [Cucumis sativus])
HSP 1 Score: 53.5 bits (127), Expect = 5.2e-03
Identity = 26/27 (96.30%), Postives = 27/27 (100.00%), Query Frame = 0
Query: 1 MTRRNAIFTSLRLANSFFSTRSRYPQL 28
MTRRNAIFTSLRLANSFFSTRSRYPQ+
Sbjct: 1 MTRRNAIFTSLRLANSFFSTRSRYPQV 27
HSP 2 Score: 736.5 bits (1900), Expect = 1.3e-208
Identity = 352/406 (86.70%), Postives = 388/406 (95.57%), Query Frame = 0
Query: 27 LGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKAF 86
LGI LSD+FVIRVLKELRN PLK LSFF+WVGCRPDYDHNTV+YNAIARVL R+DSI+AF
Sbjct: 217 LGIVLSDSFVIRVLKELRNFPLKGLSFFHWVGCRPDYDHNTVTYNAIARVLGRDDSIEAF 276
Query: 87 WGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLRT 146
WG++EEMKNA +IDIDTYIKISRQFQ+SKMMGDAVKLYELMMDGPYKPSL DCS+LLR+
Sbjct: 277 WGLVEEMKNAGHEIDIDTYIKISRQFQRSKMMGDAVKLYELMMDGPYKPSLQDCSVLLRS 336
Query: 147 IAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGYE 206
I+ASDNPDLSLV+RVAKKFEA+GYSLSKA+YDGIHRSLTS GKFD+AE+IVKSMRNAGYE
Sbjct: 337 ISASDNPDLSLVFRVAKKFEATGYSLSKAVYDGIHRSLTSAGKFDEAENIVKSMRNAGYE 396
Query: 207 PDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALVC 266
PDNVT+SQLVFGLCKARRL+EA EVLDEMEAQGC+PDIKTWT+LIQGHC AN++D ALVC
Sbjct: 397 PDNVTYSQLVFGLCKARRLEEACEVLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVC 456
Query: 267 FAKMIEKNCDPDADLLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNLL 326
FAKMIEKNCDPDADLLDVLI+GFL QKKLDGAYQLLIEL NKAH+RPWQATYKHLI+ LL
Sbjct: 457 FAKMIEKNCDPDADLLDVLISGFLGQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLL 516
Query: 327 EVRKLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLH 386
EVRKLEEA++LLRLMKKQNYPPFPEPFVQYISKFGTV+DA +FLK LSSKEYPS+SAYLH
Sbjct: 517 EVRKLEEAISLLRLMKKQNYPPFPEPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLH 576
Query: 387 IFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESKTTGAT 433
+FNSFFNEGR+SEAKDLLFKCPHHIRKH+E+CKLFGSAESK+T T
Sbjct: 577 VFNSFFNEGRHSEAKDLLFKCPHHIRKHSEICKLFGSAESKSTTTT 622
BLAST of Cmc02g0058601 vs. NCBI nr
Match:
XP_023530746.1 (pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Cucurbita pepo subsp. pepo])
HSP 1 Score: 736.5 bits (1900), Expect = 1.3e-208
Identity = 353/406 (86.95%), Postives = 388/406 (95.57%), Query Frame = 0
Query: 27 LGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKAF 86
LGI LSD+FVIRVLKELRN PLK LSFF+WVGCRPDYDHNTV+YNAIARVL R+DSI+AF
Sbjct: 217 LGIVLSDSFVIRVLKELRNFPLKGLSFFHWVGCRPDYDHNTVTYNAIARVLGRDDSIEAF 276
Query: 87 WGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLRT 146
WG++EEMKNA +IDIDTYIKISRQFQ+SKMMGDAVKLYELMMDGPYKPSL DCS+LLR+
Sbjct: 277 WGLVEEMKNAGHEIDIDTYIKISRQFQRSKMMGDAVKLYELMMDGPYKPSLQDCSVLLRS 336
Query: 147 IAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGYE 206
I+ASDNPDLSLV+RVAKKFEA+GYSLSKA+YDGIHRSLTS GKFD+AE+IVKSMRNAGYE
Sbjct: 337 ISASDNPDLSLVFRVAKKFEATGYSLSKAVYDGIHRSLTSAGKFDEAENIVKSMRNAGYE 396
Query: 207 PDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALVC 266
PDNVT+SQLVFGLCKARRL+EA EVLDEMEAQGC+PDIKTWT+LIQGHC AN++D ALVC
Sbjct: 397 PDNVTYSQLVFGLCKARRLEEACEVLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVC 456
Query: 267 FAKMIEKNCDPDADLLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNLL 326
FAKMIEKNCDPDADLLDVLI+GFL QKKLDGAYQLLIEL NKAH+RPWQATYKHLI+ LL
Sbjct: 457 FAKMIEKNCDPDADLLDVLISGFLGQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLL 516
Query: 327 EVRKLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLH 386
EVRKLEEA++LLRLMKKQNYPPFPEPFVQYISKFGTV+DA +FLK LSSKEYPS+SAYLH
Sbjct: 517 EVRKLEEAISLLRLMKKQNYPPFPEPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLH 576
Query: 387 IFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESKTTGAT 433
IFNSFFNEGR+SEAKDLLFKCPHHIRKH+E+CKLFGSAESK+T T
Sbjct: 577 IFNSFFNEGRHSEAKDLLFKCPHHIRKHSEICKLFGSAESKSTTPT 622
BLAST of Cmc02g0058601 vs. ExPASy Swiss-Prot
Match:
Q9STK5 (Pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g48250 PE=2 SV=1)
HSP 1 Score: 536.2 bits (1380), Expect = 3.4e-151
Identity = 251/402 (62.44%), Postives = 325/402 (80.85%), Query Frame = 0
Query: 26 QLGIALSDNFVIRVLKELRNSPLKALSFFNWV---GCRPDYDHNTVSYNAIARVLARNDS 85
++ + LSDNFVIRVLKELR PLKAL+FF+WV G Y H+TV+YNA RVLAR +S
Sbjct: 219 EMKLVLSDNFVIRVLKELREHPLKALAFFHWVGGGGSSSGYQHSTVTYNAALRVLARPNS 278
Query: 86 IKAFWGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSI 145
+ FW V++EMK A D+D+DTYIK+SRQFQKS+MM + VKLYE MMDGP+KPS+ DCS+
Sbjct: 279 VAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSL 338
Query: 146 LLRTIAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRN 205
LLR ++ S NPDL LV+RV++K+E++G SLSKA+YDGIHRSLTS G+FD+AE+I K+MRN
Sbjct: 339 LLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRN 398
Query: 206 AGYEPDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDV 265
AGYEPDN+T+SQLVFGLCKA+RL+EAR VLD+MEAQGC PDIKTWT+LIQGHC N+LD
Sbjct: 399 AGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDK 458
Query: 266 ALVCFAKMIEKNCDPDADLLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLI 325
AL CFA M+EK D D++LLDVLI+GF+ K +GA L+E+ A+V+PWQ+TYK LI
Sbjct: 459 ALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLI 518
Query: 326 KNLLEVRKLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVS 385
LL+++K EEA+ LL++MKKQNYP + E F Y++KFGT++DA FL VLSSK+ PS +
Sbjct: 519 DKLLKIKKSEEALDLLQMMKKQNYPAYAEAFDGYLAKFGTLEDAKKFLDVLSSKDSPSFA 578
Query: 386 AYLHIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSA 425
AY H+ +F+ EGR ++AK+LLF CPHH + H ++ +LFG+A
Sbjct: 579 AYFHVIEAFYREGRLTDAKNLLFICPHHFKTHPKISELFGAA 620
BLAST of Cmc02g0058601 vs. ExPASy Swiss-Prot
Match:
Q9M891 (Pentatricopeptide repeat-containing protein At3g02490, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g02490 PE=2 SV=1)
HSP 1 Score: 246.9 bits (629), Expect = 4.2e-64
Identity = 136/405 (33.58%), Postives = 229/405 (56.54%), Query Frame = 0
Query: 27 LGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKAF 86
L + + V VL++L P KAL FF W+ + H+ +YNA+ARVL + + F
Sbjct: 241 LKLEFKSDVVKMVLEKLDVDPRKALLFFRWIDESGSFKHDEKTYNAMARVLGKEKFLDRF 300
Query: 87 WGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYK--PSLPDCSILL 146
+IEE+++A +++++TY+++S +F ++KM+ +AV+L+E M G P+ CS+LL
Sbjct: 301 QHMIEEIRSAGYEMEMETYVRVSARFCQTKMIKEAVELFEFAMAGSISNTPTPHCCSLLL 360
Query: 147 RTIAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAG 206
+ I + D+ L R K + +G + + + +SL S +F + +++K+M G
Sbjct: 361 KKIVTAKKLDMDLFTRTLKAYTGNGNVVPDVMLQHVLKSLRSVDRFGQSNEVLKAMNEGG 420
Query: 207 YEPDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVAL 266
Y P S + GL + + EA E+++ MEA G D K L++GHC+A L+ A
Sbjct: 421 YVPSGDLQSVIASGLSRKGKKDEANELVNFMEASGNHLDDKAMASLVEGHCDAKDLEEAS 480
Query: 267 VCFAKMIEKNCDPDAD-LLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIK 326
CF KMI K A + L+ + + + Y+L EL + ++PW +TYK +++
Sbjct: 481 ECFKKMIGKEGVSYAGYAFEKLVLAYCNSFQARDVYKLFSELVKQNQLKPWHSTYKIMVR 540
Query: 327 NLLEVR-----KLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEY 386
NLL + EEA++LL +M+ +PPF +PF+ Y+S GT +A FLK ++SK++
Sbjct: 541 NLLMKKVARDGGFEEALSLLPMMRNHGFPPFVDPFMDYLSNSGTSAEAFAFLKAVTSKKF 600
Query: 387 PSVSAYLHIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGS 424
PS S L +F + R+SEA+DLL P +IR++ EV +LF +
Sbjct: 601 PSNSMVLRVFEAMLKSARHSEAQDLLSMSPSYIRRNAEVLELFNT 645
BLAST of Cmc02g0058601 vs. ExPASy Swiss-Prot
Match:
Q8LPF1 (Pentatricopeptide repeat-containing protein At5g15980, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g15980 PE=2 SV=1)
HSP 1 Score: 240.4 bits (612), Expect = 3.9e-62
Identity = 131/410 (31.95%), Postives = 227/410 (55.37%), Query Frame = 0
Query: 23 RYPQLGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDS 82
R L + + V +++ L P KAL FF W+ + H+ +YNA+ARVL +
Sbjct: 243 RVRDLNVEFKSDLVKMIVERLDVEPRKALLFFRWIDESDLFKHDEKTYNAMARVLGKEKF 302
Query: 83 IKAFWGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPS--LPDC 142
+ F ++ EM++A +++I+TY+++S +F ++K++ +AV L+E+ M G + P C
Sbjct: 303 LDRFQNIVVEMRSAGYEVEIETYVRVSTRFCQTKLIKEAVDLFEIAMAGSSSSNNPTPHC 362
Query: 143 -SILLRTIAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKS 202
+LL+ I + D+ L R K + +G +L+ ++ + +SL S + + + +++K
Sbjct: 363 FCLLLKKIVTAKILDMDLFSRAVKVYTKNGNALTDSLLKSVLKSLRSVDRVEQSNELLKE 422
Query: 203 MRNAGYEPDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANK 262
M+ GY P S + L + + EA E +D ME+ G D K L++G+C++
Sbjct: 423 MKRGGYVPSGDMQSMIASSLSRKGKKDEADEFVDFMESSGNNLDDKAMASLVEGYCDSGN 482
Query: 263 LDVALVCFAKMIEKNCDPDADL-LDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATY 322
LD ALVCF KM+ AD + L+ + ++ ++ AY+LL K ++P +TY
Sbjct: 483 LDEALVCFEKMVGNTGVSYADYSFEKLVLAYCNKNQVRDAYKLLSAQVTKNQLKPRHSTY 542
Query: 323 KHLIKNLLEVR-----KLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVL 382
K L+ NLL + EEA++LL +MK +PPF +PF+ Y S G +A FLK +
Sbjct: 543 KSLVTNLLTKKIARDGGFEEALSLLPIMKDHGFPPFIDPFMSYFSSTGKSTEALGFLKAM 602
Query: 383 SSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGS 424
+S +P +S L +F + R+SEA+DLL CP++IR + +V +LF +
Sbjct: 603 TSNNFPYISVVLRVFETMMKSARHSEAQDLLSLCPNYIRNNPDVLELFNT 652
BLAST of Cmc02g0058601 vs. ExPASy Swiss-Prot
Match:
Q9FH87 (Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis thaliana OX=3702 GN=At5g65820 PE=3 SV=1)
HSP 1 Score: 134.4 bits (337), Expect = 3.0e-30
Identity = 98/407 (24.08%), Postives = 189/407 (46.44%), Query Frame = 0
Query: 10 SLRLANSFFSTRSRYPQLGIALSDN-------FVIRVLKELRNSPLKALSFFNWVGCRPD 69
S R+ F SR P+L +AL+++ + RVL ++ FF W +P
Sbjct: 86 SYRILRKF---HSRVPKLELALNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPR 145
Query: 70 YDHNTVSYNAIARVLARNDSIKAFWGVIEEMKNASLD-IDIDTYIKISRQFQKSKMMGDA 129
Y H+ Y ++ ++L++ A WG+IEEM+ + I+ + ++ + ++F + M+ A
Sbjct: 146 YCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKA 205
Query: 130 VKLYELMMDGPYKPSLPDCSILLRTIAASDNPDLSLVYRVAKKFE--ASGYSLSKAIYDG 189
+++ + M ++P LL + + V AK FE + ++ +
Sbjct: 206 IEVLDEMPKFGFEPDEYVFGCLLDALCKHGS-----VKDAAKLFEDMRMRFPVNLRYFTS 265
Query: 190 IHRSLTSRGKFDDAEDIVKSMRNAGYEPDNVTFSQLVFGLCKARRLKEAREVLDEMEAQG 249
+ GK +A+ ++ M AG+EPD V ++ L+ G A ++ +A ++L +M +G
Sbjct: 266 LLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRG 325
Query: 250 CIPDIKTWTVLIQGHCNANKLDVALVCFAKMIEKNCDPDADLLDVLINGFLSQKKLDGAY 309
P+ +TVLIQ C ++++ A+ F +M C+ D L++GF K+D Y
Sbjct: 326 FEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCY 385
Query: 310 QLLIELTNKAHVRPWQATYKHLIKNLLEVRKLEEAMALLRLMKKQNYPP---FPEPFVQY 369
+L ++ K + P + TY H++ + EE + L+ M++ Y P ++
Sbjct: 386 IVLDDMIKKG-LMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRL 445
Query: 370 ISKFGTVQDADDFLKVLSSKEY-PSVSAYLHIFNSFFNEGRYSEAKD 403
K G V++A + P V ++ + N ++G EA D
Sbjct: 446 ACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASD 483
BLAST of Cmc02g0058601 vs. ExPASy Swiss-Prot
Match:
Q94JX6 (Pentatricopeptide repeat-containing protein At5g18390, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g18390 PE=2 SV=2)
HSP 1 Score: 131.3 bits (329), Expect = 2.6e-29
Identity = 97/382 (25.39%), Postives = 170/382 (44.50%), Query Frame = 0
Query: 27 LGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKAF 86
L + ++ FV RVL+ S +L FFNW P Y ++ Y +A+ LA + ++
Sbjct: 71 LRLPVTSEFVFRVLRATSRSSNDSLRFFNWARSNPSYTPTSMEYEELAKSLASHKKYESM 130
Query: 87 WGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLRT 146
W ++++MK+ SLDI +T I Q+ K+ + AV+L+ +P +T
Sbjct: 131 WKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFN---------GVP------KT 190
Query: 147 IAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGYE 206
+ D +Y+ + +L F A +++ M G +
Sbjct: 191 LGCQQTVD---------------------VYNSLLHALCDVKMFHGAYALIRRMIRKGLK 250
Query: 207 PDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALVC 266
PD T++ LV G C A ++KEA+E LDEM +G P + +LI+G NA L+ A
Sbjct: 251 PDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEM 310
Query: 267 FAKMIEKNCDPDADLLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNLL 326
+KM + PD ++LI +++ ++ K + TYK LI +
Sbjct: 311 VSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTAC-KLGLCVDIDTYKTLIPAVS 370
Query: 327 EVRKLEEAMALLRLMKKQNYPPFPE---PFVQYISKFGTVQDADDFLKVLSSKEY-PSVS 386
++ K++EA LL + + PFP P ++ + + G DA F + K + P+
Sbjct: 371 KIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRP 415
Query: 387 AYLHIFNSFFNEGRYSEAKDLL 405
Y + G++ +A + L
Sbjct: 431 VYTMLITMCGRGGKFVDAANYL 415
BLAST of Cmc02g0058601 vs. ExPASy TrEMBL
Match:
A0A5D3BGX0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001060 PE=4 SV=1)
HSP 1 Score: 822.4 bits (2123), Expect = 8.9e-235
Identity = 406/407 (99.75%), Postives = 407/407 (100.00%), Query Frame = 0
Query: 26 QLGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKA 85
+LGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKA
Sbjct: 217 ELGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKA 276
Query: 86 FWGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLR 145
FWGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLR
Sbjct: 277 FWGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLR 336
Query: 146 TIAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGY 205
TIAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGY
Sbjct: 337 TIAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGY 396
Query: 206 EPDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALV 265
EPDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALV
Sbjct: 397 EPDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALV 456
Query: 266 CFAKMIEKNCDPDADLLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNL 325
CFAKMIEKNCDPDADLLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNL
Sbjct: 457 CFAKMIEKNCDPDADLLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNL 516
Query: 326 LEVRKLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYL 385
LEVRKLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYL
Sbjct: 517 LEVRKLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYL 576
Query: 386 HIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESKTTGAT 433
HIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESKTTGAT
Sbjct: 577 HIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESKTTGAT 623
BLAST of Cmc02g0058601 vs. ExPASy TrEMBL
Match:
A0A5D3BGX0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001060 PE=4 SV=1)
HSP 1 Score: 53.5 bits (127), Expect = 2.5e-03
Identity = 26/27 (96.30%), Postives = 27/27 (100.00%), Query Frame = 0
Query: 1 MTRRNAIFTSLRLANSFFSTRSRYPQL 28
MTRRNAIFTSLRLANSFFSTRSRYPQ+
Sbjct: 1 MTRRNAIFTSLRLANSFFSTRSRYPQV 27
HSP 2 Score: 822.4 bits (2123), Expect = 8.9e-235
Identity = 406/407 (99.75%), Postives = 407/407 (100.00%), Query Frame = 0
Query: 26 QLGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKA 85
+LGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKA
Sbjct: 217 ELGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKA 276
Query: 86 FWGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLR 145
FWGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLR
Sbjct: 277 FWGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLR 336
Query: 146 TIAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGY 205
TIAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGY
Sbjct: 337 TIAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGY 396
Query: 206 EPDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALV 265
EPDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALV
Sbjct: 397 EPDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALV 456
Query: 266 CFAKMIEKNCDPDADLLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNL 325
CFAKMIEKNCDPDADLLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNL
Sbjct: 457 CFAKMIEKNCDPDADLLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNL 516
Query: 326 LEVRKLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYL 385
LEVRKLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYL
Sbjct: 517 LEVRKLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYL 576
Query: 386 HIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESKTTGAT 433
HIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESKTTGAT
Sbjct: 577 HIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESKTTGAT 623
BLAST of Cmc02g0058601 vs. ExPASy TrEMBL
Match:
A0A5A7UW70 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G001030 PE=4 SV=1)
HSP 1 Score: 53.5 bits (127), Expect = 2.5e-03
Identity = 26/27 (96.30%), Postives = 27/27 (100.00%), Query Frame = 0
Query: 1 MTRRNAIFTSLRLANSFFSTRSRYPQL 28
MTRRNAIFTSLRLANSFFSTRSRYPQ+
Sbjct: 1 MTRRNAIFTSLRLANSFFSTRSRYPQV 27
HSP 2 Score: 822.4 bits (2123), Expect = 8.9e-235
Identity = 406/407 (99.75%), Postives = 407/407 (100.00%), Query Frame = 0
Query: 26 QLGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKA 85
+LGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKA
Sbjct: 217 ELGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKA 276
Query: 86 FWGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLR 145
FWGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLR
Sbjct: 277 FWGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLR 336
Query: 146 TIAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGY 205
TIAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGY
Sbjct: 337 TIAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGY 396
Query: 206 EPDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALV 265
EPDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALV
Sbjct: 397 EPDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALV 456
Query: 266 CFAKMIEKNCDPDADLLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNL 325
CFAKMIEKNCDPDADLLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNL
Sbjct: 457 CFAKMIEKNCDPDADLLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNL 516
Query: 326 LEVRKLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYL 385
LEVRKLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYL
Sbjct: 517 LEVRKLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYL 576
Query: 386 HIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESKTTGAT 433
HIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESKTTGAT
Sbjct: 577 HIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESKTTGAT 623
BLAST of Cmc02g0058601 vs. ExPASy TrEMBL
Match:
A0A1S3CLM3 (pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502372 PE=4 SV=1)
HSP 1 Score: 53.5 bits (127), Expect = 2.5e-03
Identity = 26/27 (96.30%), Postives = 27/27 (100.00%), Query Frame = 0
Query: 1 MTRRNAIFTSLRLANSFFSTRSRYPQL 28
MTRRNAIFTSLRLANSFFSTRSRYPQ+
Sbjct: 1 MTRRNAIFTSLRLANSFFSTRSRYPQV 27
HSP 2 Score: 776.2 bits (2003), Expect = 7.3e-221
Identity = 378/407 (92.87%), Postives = 400/407 (98.28%), Query Frame = 0
Query: 26 QLGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKA 85
+LGIALSDNFVIRVLKELRNSPLKALSFF+WVGCRPDYDHNTVSYNAIARVL R+DSI+A
Sbjct: 217 ELGIALSDNFVIRVLKELRNSPLKALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEA 276
Query: 86 FWGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLR 145
FWGVIEEMK+A+ +IDIDTYIKISRQFQKSKMMG+AVKLYELMMDGPYKPSL DCS+LLR
Sbjct: 277 FWGVIEEMKHANHEIDIDTYIKISRQFQKSKMMGEAVKLYELMMDGPYKPSLQDCSVLLR 336
Query: 146 TIAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGY 205
TIAASDNPDLSLVYRVAKKFEA+GYSLSKA+YDGIHRSLTS GKFDDAE+IVKSMRNAGY
Sbjct: 337 TIAASDNPDLSLVYRVAKKFEATGYSLSKAMYDGIHRSLTSTGKFDDAENIVKSMRNAGY 396
Query: 206 EPDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALV 265
EPDNVT+SQLVFGLCKARRL+EAR+VLDEMEAQGCIPDIKTWT+LIQGHCNAN+LD+ALV
Sbjct: 397 EPDNVTYSQLVFGLCKARRLEEARKVLDEMEAQGCIPDIKTWTILIQGHCNANELDIALV 456
Query: 266 CFAKMIEKNCDPDADLLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNL 325
CFAKMIEKNCDPDADLLDVLI+GFL+QKKL+GAYQLLIELTNKAHVRPWQATYK LIKNL
Sbjct: 457 CFAKMIEKNCDPDADLLDVLISGFLNQKKLNGAYQLLIELTNKAHVRPWQATYKQLIKNL 516
Query: 326 LEVRKLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYL 385
LEVRKLEEA+ALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYL
Sbjct: 517 LEVRKLEEAIALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYL 576
Query: 386 HIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESKTTGAT 433
HIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAES TT AT
Sbjct: 577 HIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESNTTAAT 623
BLAST of Cmc02g0058601 vs. ExPASy TrEMBL
Match:
A0A0A0LNT7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G003530 PE=4 SV=1)
HSP 1 Score: 53.5 bits (127), Expect = 2.5e-03
Identity = 26/27 (96.30%), Postives = 27/27 (100.00%), Query Frame = 0
Query: 1 MTRRNAIFTSLRLANSFFSTRSRYPQL 28
MTRRNAIFTSLRLANSFFSTRSRYPQ+
Sbjct: 1 MTRRNAIFTSLRLANSFFSTRSRYPQV 27
HSP 2 Score: 736.5 bits (1900), Expect = 6.4e-209
Identity = 352/406 (86.70%), Postives = 388/406 (95.57%), Query Frame = 0
Query: 27 LGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKAF 86
LGI LSD+FVIRVLKELRN PLK LSFF+WVGCRPDYDHNTV+YNAIARVL R+DSI+AF
Sbjct: 217 LGIVLSDSFVIRVLKELRNFPLKGLSFFHWVGCRPDYDHNTVTYNAIARVLGRDDSIEAF 276
Query: 87 WGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLRT 146
WG++EEMKNA +IDIDTYIKISRQFQ+SKMMGDAVKLYELMMDGPYKPSL DCS+LLR+
Sbjct: 277 WGLVEEMKNAGHEIDIDTYIKISRQFQRSKMMGDAVKLYELMMDGPYKPSLQDCSVLLRS 336
Query: 147 IAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGYE 206
I+ASDNPDLSLV+RVAKKFEA+GYSLSKA+YDGIHRSLTS GKFD+AE+IVKSMRNAGYE
Sbjct: 337 ISASDNPDLSLVFRVAKKFEATGYSLSKAVYDGIHRSLTSAGKFDEAENIVKSMRNAGYE 396
Query: 207 PDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALVC 266
PDNVT+SQLVFGLCKARRL+EA EVLDEMEAQGC+PDIKTWT+LIQGHC AN++D ALVC
Sbjct: 397 PDNVTYSQLVFGLCKARRLEEACEVLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVC 456
Query: 267 FAKMIEKNCDPDADLLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNLL 326
FAKMIEKNCDPDADLLDVLI+GFL QKKLDGAYQLLIEL NKAH+RPWQATYKHLI+ LL
Sbjct: 457 FAKMIEKNCDPDADLLDVLISGFLGQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLL 516
Query: 327 EVRKLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLH 386
EVRKLEEA++LLRLMKKQNYPPFPEPFVQYISKFGTV+DA +FLK LSSKEYPS+SAYLH
Sbjct: 517 EVRKLEEAISLLRLMKKQNYPPFPEPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLH 576
Query: 387 IFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESKTTGAT 433
+FNSFFNEGR+SEAKDLLFKCPHHIRKH+E+CKLFGSAESK+T T
Sbjct: 577 VFNSFFNEGRHSEAKDLLFKCPHHIRKHSEICKLFGSAESKSTTTT 622
BLAST of Cmc02g0058601 vs. TAIR 10
Match:
AT3G48250.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 536.2 bits (1380), Expect = 2.4e-152
Identity = 251/402 (62.44%), Postives = 325/402 (80.85%), Query Frame = 0
Query: 26 QLGIALSDNFVIRVLKELRNSPLKALSFFNWV---GCRPDYDHNTVSYNAIARVLARNDS 85
++ + LSDNFVIRVLKELR PLKAL+FF+WV G Y H+TV+YNA RVLAR +S
Sbjct: 219 EMKLVLSDNFVIRVLKELREHPLKALAFFHWVGGGGSSSGYQHSTVTYNAALRVLARPNS 278
Query: 86 IKAFWGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSI 145
+ FW V++EMK A D+D+DTYIK+SRQFQKS+MM + VKLYE MMDGP+KPS+ DCS+
Sbjct: 279 VAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSL 338
Query: 146 LLRTIAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRN 205
LLR ++ S NPDL LV+RV++K+E++G SLSKA+YDGIHRSLTS G+FD+AE+I K+MRN
Sbjct: 339 LLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRN 398
Query: 206 AGYEPDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDV 265
AGYEPDN+T+SQLVFGLCKA+RL+EAR VLD+MEAQGC PDIKTWT+LIQGHC N+LD
Sbjct: 399 AGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDK 458
Query: 266 ALVCFAKMIEKNCDPDADLLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLI 325
AL CFA M+EK D D++LLDVLI+GF+ K +GA L+E+ A+V+PWQ+TYK LI
Sbjct: 459 ALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLI 518
Query: 326 KNLLEVRKLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVS 385
LL+++K EEA+ LL++MKKQNYP + E F Y++KFGT++DA FL VLSSK+ PS +
Sbjct: 519 DKLLKIKKSEEALDLLQMMKKQNYPAYAEAFDGYLAKFGTLEDAKKFLDVLSSKDSPSFA 578
Query: 386 AYLHIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSA 425
AY H+ +F+ EGR ++AK+LLF CPHH + H ++ +LFG+A
Sbjct: 579 AYFHVIEAFYREGRLTDAKNLLFICPHHFKTHPKISELFGAA 620
BLAST of Cmc02g0058601 vs. TAIR 10
Match:
AT3G02490.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 246.9 bits (629), Expect = 3.0e-65
Identity = 136/405 (33.58%), Postives = 229/405 (56.54%), Query Frame = 0
Query: 27 LGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKAF 86
L + + V VL++L P KAL FF W+ + H+ +YNA+ARVL + + F
Sbjct: 241 LKLEFKSDVVKMVLEKLDVDPRKALLFFRWIDESGSFKHDEKTYNAMARVLGKEKFLDRF 300
Query: 87 WGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYK--PSLPDCSILL 146
+IEE+++A +++++TY+++S +F ++KM+ +AV+L+E M G P+ CS+LL
Sbjct: 301 QHMIEEIRSAGYEMEMETYVRVSARFCQTKMIKEAVELFEFAMAGSISNTPTPHCCSLLL 360
Query: 147 RTIAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAG 206
+ I + D+ L R K + +G + + + +SL S +F + +++K+M G
Sbjct: 361 KKIVTAKKLDMDLFTRTLKAYTGNGNVVPDVMLQHVLKSLRSVDRFGQSNEVLKAMNEGG 420
Query: 207 YEPDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVAL 266
Y P S + GL + + EA E+++ MEA G D K L++GHC+A L+ A
Sbjct: 421 YVPSGDLQSVIASGLSRKGKKDEANELVNFMEASGNHLDDKAMASLVEGHCDAKDLEEAS 480
Query: 267 VCFAKMIEKNCDPDAD-LLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIK 326
CF KMI K A + L+ + + + Y+L EL + ++PW +TYK +++
Sbjct: 481 ECFKKMIGKEGVSYAGYAFEKLVLAYCNSFQARDVYKLFSELVKQNQLKPWHSTYKIMVR 540
Query: 327 NLLEVR-----KLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEY 386
NLL + EEA++LL +M+ +PPF +PF+ Y+S GT +A FLK ++SK++
Sbjct: 541 NLLMKKVARDGGFEEALSLLPMMRNHGFPPFVDPFMDYLSNSGTSAEAFAFLKAVTSKKF 600
Query: 387 PSVSAYLHIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGS 424
PS S L +F + R+SEA+DLL P +IR++ EV +LF +
Sbjct: 601 PSNSMVLRVFEAMLKSARHSEAQDLLSMSPSYIRRNAEVLELFNT 645
BLAST of Cmc02g0058601 vs. TAIR 10
Match:
AT5G15980.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 240.4 bits (612), Expect = 2.8e-63
Identity = 131/410 (31.95%), Postives = 227/410 (55.37%), Query Frame = 0
Query: 23 RYPQLGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDS 82
R L + + V +++ L P KAL FF W+ + H+ +YNA+ARVL +
Sbjct: 243 RVRDLNVEFKSDLVKMIVERLDVEPRKALLFFRWIDESDLFKHDEKTYNAMARVLGKEKF 302
Query: 83 IKAFWGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPS--LPDC 142
+ F ++ EM++A +++I+TY+++S +F ++K++ +AV L+E+ M G + P C
Sbjct: 303 LDRFQNIVVEMRSAGYEVEIETYVRVSTRFCQTKLIKEAVDLFEIAMAGSSSSNNPTPHC 362
Query: 143 -SILLRTIAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKS 202
+LL+ I + D+ L R K + +G +L+ ++ + +SL S + + + +++K
Sbjct: 363 FCLLLKKIVTAKILDMDLFSRAVKVYTKNGNALTDSLLKSVLKSLRSVDRVEQSNELLKE 422
Query: 203 MRNAGYEPDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANK 262
M+ GY P S + L + + EA E +D ME+ G D K L++G+C++
Sbjct: 423 MKRGGYVPSGDMQSMIASSLSRKGKKDEADEFVDFMESSGNNLDDKAMASLVEGYCDSGN 482
Query: 263 LDVALVCFAKMIEKNCDPDADL-LDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATY 322
LD ALVCF KM+ AD + L+ + ++ ++ AY+LL K ++P +TY
Sbjct: 483 LDEALVCFEKMVGNTGVSYADYSFEKLVLAYCNKNQVRDAYKLLSAQVTKNQLKPRHSTY 542
Query: 323 KHLIKNLLEVR-----KLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVL 382
K L+ NLL + EEA++LL +MK +PPF +PF+ Y S G +A FLK +
Sbjct: 543 KSLVTNLLTKKIARDGGFEEALSLLPIMKDHGFPPFIDPFMSYFSSTGKSTEALGFLKAM 602
Query: 383 SSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGS 424
+S +P +S L +F + R+SEA+DLL CP++IR + +V +LF +
Sbjct: 603 TSNNFPYISVVLRVFETMMKSARHSEAQDLLSLCPNYIRNNPDVLELFNT 652
BLAST of Cmc02g0058601 vs. TAIR 10
Match:
AT5G65820.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 134.4 bits (337), Expect = 2.1e-31
Identity = 98/407 (24.08%), Postives = 189/407 (46.44%), Query Frame = 0
Query: 10 SLRLANSFFSTRSRYPQLGIALSDN-------FVIRVLKELRNSPLKALSFFNWVGCRPD 69
S R+ F SR P+L +AL+++ + RVL ++ FF W +P
Sbjct: 86 SYRILRKF---HSRVPKLELALNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPR 145
Query: 70 YDHNTVSYNAIARVLARNDSIKAFWGVIEEMKNASLD-IDIDTYIKISRQFQKSKMMGDA 129
Y H+ Y ++ ++L++ A WG+IEEM+ + I+ + ++ + ++F + M+ A
Sbjct: 146 YCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKA 205
Query: 130 VKLYELMMDGPYKPSLPDCSILLRTIAASDNPDLSLVYRVAKKFE--ASGYSLSKAIYDG 189
+++ + M ++P LL + + V AK FE + ++ +
Sbjct: 206 IEVLDEMPKFGFEPDEYVFGCLLDALCKHGS-----VKDAAKLFEDMRMRFPVNLRYFTS 265
Query: 190 IHRSLTSRGKFDDAEDIVKSMRNAGYEPDNVTFSQLVFGLCKARRLKEAREVLDEMEAQG 249
+ GK +A+ ++ M AG+EPD V ++ L+ G A ++ +A ++L +M +G
Sbjct: 266 LLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRG 325
Query: 250 CIPDIKTWTVLIQGHCNANKLDVALVCFAKMIEKNCDPDADLLDVLINGFLSQKKLDGAY 309
P+ +TVLIQ C ++++ A+ F +M C+ D L++GF K+D Y
Sbjct: 326 FEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCY 385
Query: 310 QLLIELTNKAHVRPWQATYKHLIKNLLEVRKLEEAMALLRLMKKQNYPP---FPEPFVQY 369
+L ++ K + P + TY H++ + EE + L+ M++ Y P ++
Sbjct: 386 IVLDDMIKKG-LMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRL 445
Query: 370 ISKFGTVQDADDFLKVLSSKEY-PSVSAYLHIFNSFFNEGRYSEAKD 403
K G V++A + P V ++ + N ++G EA D
Sbjct: 446 ACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASD 483
BLAST of Cmc02g0058601 vs. TAIR 10
Match:
AT5G18390.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 131.3 bits (329), Expect = 1.8e-30
Identity = 97/382 (25.39%), Postives = 170/382 (44.50%), Query Frame = 0
Query: 27 LGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKAF 86
L + ++ FV RVL+ S +L FFNW P Y ++ Y +A+ LA + ++
Sbjct: 71 LRLPVTSEFVFRVLRATSRSSNDSLRFFNWARSNPSYTPTSMEYEELAKSLASHKKYESM 130
Query: 87 WGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLRT 146
W ++++MK+ SLDI +T I Q+ K+ + AV+L+ +P +T
Sbjct: 131 WKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFN---------GVP------KT 190
Query: 147 IAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGYE 206
+ D +Y+ + +L F A +++ M G +
Sbjct: 191 LGCQQTVD---------------------VYNSLLHALCDVKMFHGAYALIRRMIRKGLK 250
Query: 207 PDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALVC 266
PD T++ LV G C A ++KEA+E LDEM +G P + +LI+G NA L+ A
Sbjct: 251 PDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEM 310
Query: 267 FAKMIEKNCDPDADLLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNLL 326
+KM + PD ++LI +++ ++ K + TYK LI +
Sbjct: 311 VSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTAC-KLGLCVDIDTYKTLIPAVS 370
Query: 327 EVRKLEEAMALLRLMKKQNYPPFPE---PFVQYISKFGTVQDADDFLKVLSSKEY-PSVS 386
++ K++EA LL + + PFP P ++ + + G DA F + K + P+
Sbjct: 371 KIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRP 415
Query: 387 AYLHIFNSFFNEGRYSEAKDLL 405
Y + G++ +A + L
Sbjct: 431 VYTMLITMCGRGGKFVDAANYL 415
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_008464511.1 | 1.8e-234 | 99.75 | PREDICTED: pentatricopeptide repeat-containing protein At3g48250, chloroplastic ... | [more] |
XP_008464511.1 | 5.2e-03 | 96.30 | PREDICTED: pentatricopeptide repeat-containing protein At3g48250, chloroplastic ... | [more] |
KAA0057819.1 | 5.2e-03 | 96.30 | pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] | [more] |
XP_004138087.1 | 5.2e-03 | 96.30 | pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Cucumis sa... | [more] |
XP_023530746.1 | 1.3e-208 | 86.95 | pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Cucurbita ... | [more] |
Match Name | E-value | Identity | Description | |
Q9STK5 | 3.4e-151 | 62.44 | Pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Arabidop... | [more] |
Q9M891 | 4.2e-64 | 33.58 | Pentatricopeptide repeat-containing protein At3g02490, mitochondrial OS=Arabidop... | [more] |
Q8LPF1 | 3.9e-62 | 31.95 | Pentatricopeptide repeat-containing protein At5g15980, mitochondrial OS=Arabidop... | [more] |
Q9FH87 | 3.0e-30 | 24.08 | Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis th... | [more] |
Q94JX6 | 2.6e-29 | 25.39 | Pentatricopeptide repeat-containing protein At5g18390, mitochondrial OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3BGX0 | 8.9e-235 | 99.75 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A5D3BGX0 | 2.5e-03 | 96.30 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A5A7UW70 | 2.5e-03 | 96.30 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3CLM3 | 2.5e-03 | 96.30 | pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Cucumis ... | [more] |
A0A0A0LNT7 | 2.5e-03 | 96.30 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G003530 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT3G48250.1 | 2.4e-152 | 62.44 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G02490.1 | 3.0e-65 | 33.58 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G15980.1 | 2.8e-63 | 31.95 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G65820.1 | 2.1e-31 | 24.08 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G18390.1 | 1.8e-30 | 25.39 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |