Cmc02g0058601 (gene) Melon (Charmono) v1.1

Overview
NameCmc02g0058601
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionPentatricopeptide repeat-containing protein
LocationCMiso1.1chr02: 24067571 .. 24070495 (+)
RNA-Seq ExpressionCmc02g0058601
SyntenyCmc02g0058601
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAATAACGTCGTCTTAAATCTCGTTTCCTCTTGATTCATTTGATTGGATTAAAATTGAACCCGACCGACCCGACCCATCAAGACTCGTAGCCCAGCCCTTTGGAGAAACCCTAAGAAAAACCCCCAATTTGGGAGACCTTCTGCCGTCGTAGATCATTCAGACAGCCGACGGGGGTTTCTCGGAGCAACTATGACGAGAAGAAACGCAATTTTCACTTCCCTCAGATTGGCAAATTCCTTCTTTTCGACTCGGTCTCGATATCCCCAGGTGACTCGGTTTTCACCTTCTTCTTATGTTTCTCATCAATCCCTCATCCCCCATTTCAGAATCAACCATCCTGTTCTGTTTTTCTCGTCGAACCCCCATTCGCTTCTCGAGCTTGTTTCGACCAACGATTGGTCGGAAATGTTAGAAACTGAATTAGAGACTTTAAACCCTACACTCACACACGAAACTGTTGTCTATGTTTTGAAAAGACTTGACAAACAACCCCAAAAGGCCTCAGATTTCTTCAACTGGGCTTCTGGGAAAAATGGGTCTACTCAAAGTTCTTCCATTTATAGCATTTTGCTTAGGATTTTTGTTCAGAATGAGTCCATGAAATTGTTCTGGATTACGTTAAGGTTAATGAAAGAACGAGGGTTTTACCTAGATGAGGAAACTTATTTGACCATTTTAGGGGTTTTGAGAAAGGCGAAGAAGGCTGCTGATGCCACGGCTTTGGCTCATTTTTACAATCGAATGCTTCAAGAAAATGCCATGGACAGTGTTGTGCAGAAGGTGGTTCATATTGTTTTAGGATCTGATTGGAGTAATGATGTTGCTGGAAAACTTGAGGAGCTTGGTATTGCATTATCAGATAACTTTGTAATTAGAGTGTTGAAGGAACTTCGAAATTCTCCATTGAAAGCCTTGAGTTTTTTTAATTGGGTTGGTTGTAGGCCGGATTATGATCATAACACAGTTTCATACAATGCCATTGCCAGGGTTCTTGCACGGAATGACTCGATCAAGGCTTTTTGGGGCGTGATTGAAGAAATGAAGAATGCTAGTCTTGATATTGATATCGACACTTACATAAAGATCTCCAGGCAGTTTCAAAAGAGCAAGATGATGGGTGATGCTGTCAAGCTTTATGAGCTTATGATGGATGGGCCATACAAGCCCTCATTGCCAGATTGCAGCATTCTTTTGCGGACCATCGCTGCTAGTGACAATCCAGATTTGAGCTTGGTTTACAGAGTGGCCAAGAAATTTGAGGCTTCAGGGTACAGTCTCTCCAAAGCTATTTACGACGGAATCCATAGGTCGTTGACAAGCAGAGGAAAGTTTGATGATGCGGAGGATATCGTAAAGTCTATGAGAAATGCAGGATATGAACCTGATAATGTTACATTCAGCCAACTGGTATTTGGACTTTGCAAGGCTAGGAGACTTAAGGAAGCCCGTGAAGTGCTGGATGAGATGGAAGCACAAGGATGTATTCCCGATATCAAGACTTGGACTGTTTTAATTCAAGGACATTGTAATGCCAATAAACTTGACGTTGCTTTAGTTTGTTTTGCAAAGATGATAGAGAAGAACTGTGATCCAGATGCTGATCTTTTGGATGTGTTGATCAATGGTTTCCTTAGCCAGAAAAAGTTAGATGGTGCTTATCAGTTGCTGATTGAGTTGACGAATAAGGCTCATGTAAGACCATGGCAGGCAACATACAAACACTTAATTAAAAATCTTTTGGAAGTTAGAAAACTTGAGGAAGCCATGGCCCTCCTTCGTTTAATGAAGAAACAAAATTACCCACCTTTTCCAGAACCCTTTGTTCAATATATCTCCAAGTTTGGTACTGTGCAGGATGCTGATGACTTTCTGAAGGTTCTTAGTTCAAAAGAATATCCTTCCGTGTCTGCTTATCTTCATATTTTCAATTCATTTTTCAATGAAGGCAGATATTCTGAGGCCAAAGATCTGCTCTTTAAATGCCCACATCACATTCGAAAGCATAACGAAGTTTGTAAGCTCTTTGGATCTGCAGAAAGCAAAACCACCGGTGCCACTTAATCTTCCTCCAATCCGATTGAAACTTAATCATCACATAGAACAAATATCAACTACACATCAGGTGAAATTTCTTGTGACTATGTTCCTACTTGTTTTTAGTCATGAGATTTGGTTCAGCTGTCAAGGATTCAATCAACAACAGACTGTTGAAGTGTATGCGTTTCAATTTGCAAAAAACCAGTAGGCCAGTCGTTGTTCTGACAGAAAAGAGGTGCCTCATGCTGTGGTCTTTACGCTTGTGATTCTTTGGAGCAGTTTGATTCATTGGTTCATTCATTCATCATAACTTATTTGCTTGCTAATATATATACCGCAATGACAAAATGCAAGTCTCTGGGTTTAGAAATGAGAGCAATACAAGATTTGCCCTTCTTCCATTTTCTTTTAGAGCCAGTACTTCTGTTTACATTCTTCATTTGTATTGCAATATCCCATCTTCTGATCAGGCAACAATATCTTCTTTCATCTTCATATTATATGATAAAACCCTGCATCGTGGAAGCAAATGTGATGTTAATGCTTGAAGGGAAGGGTTTGCCATTTATTTCTGTTCCTGTATAATTGCTTCTGCTTGTAACTCTCTAATCAAGTTCTACAATAGCTTGAGAGAGTTTGATAAATACAATAAGCTGCAATTTATGGGCTTGTGCTGCCACGAGAGCTTTCTGGAACTGTTTCATTTTCAATTGATATCAGTGTACCGAGGCCTAAAGCCTAAAGTTTGTCCACTTTGCCACACCTTTTATAATCTTGTTCTTAATACATGACACCCAAAGTGGACAAAAATTATCAATTTATGAATTACTTCATGGACTAACGGTTAGAAAATTCTAAAACCGATGCCGACCAATTGATGTTCACC

mRNA sequence

AAAATAACGTCGTCTTAAATCTCGTTTCCTCTTGATTCATTTGATTGGATTAAAATTGAACCCGACCGACCCGACCCATCAAGACTCGTAGCCCAGCCCTTTGGAGAAACCCTAAGAAAAACCCCCAATTTGGGAGACCTTCTGCCGTCGTAGATCATTCAGACAGCCGACGGGGGTTTCTCGGAGCAACTATGACGAGAAGAAACGCAATTTTCACTTCCCTCAGATTGGCAAATTCCTTCTTTTCGACTCGGTCTCGATATCCCCAGCTTGGTATTGCATTATCAGATAACTTTGTAATTAGAGTGTTGAAGGAACTTCGAAATTCTCCATTGAAAGCCTTGAGTTTTTTTAATTGGGTTGGTTGTAGGCCGGATTATGATCATAACACAGTTTCATACAATGCCATTGCCAGGGTTCTTGCACGGAATGACTCGATCAAGGCTTTTTGGGGCGTGATTGAAGAAATGAAGAATGCTAGTCTTGATATTGATATCGACACTTACATAAAGATCTCCAGGCAGTTTCAAAAGAGCAAGATGATGGGTGATGCTGTCAAGCTTTATGAGCTTATGATGGATGGGCCATACAAGCCCTCATTGCCAGATTGCAGCATTCTTTTGCGGACCATCGCTGCTAGTGACAATCCAGATTTGAGCTTGGTTTACAGAGTGGCCAAGAAATTTGAGGCTTCAGGGTACAGTCTCTCCAAAGCTATTTACGACGGAATCCATAGGTCGTTGACAAGCAGAGGAAAGTTTGATGATGCGGAGGATATCGTAAAGTCTATGAGAAATGCAGGATATGAACCTGATAATGTTACATTCAGCCAACTGGTATTTGGACTTTGCAAGGCTAGGAGACTTAAGGAAGCCCGTGAAGTGCTGGATGAGATGGAAGCACAAGGATGTATTCCCGATATCAAGACTTGGACTGTTTTAATTCAAGGACATTGTAATGCCAATAAACTTGACGTTGCTTTAGTTTGTTTTGCAAAGATGATAGAGAAGAACTGTGATCCAGATGCTGATCTTTTGGATGTGTTGATCAATGGTTTCCTTAGCCAGAAAAAGTTAGATGGTGCTTATCAGTTGCTGATTGAGTTGACGAATAAGGCTCATGTAAGACCATGGCAGGCAACATACAAACACTTAATTAAAAATCTTTTGGAAGTTAGAAAACTTGAGGAAGCCATGGCCCTCCTTCGTTTAATGAAGAAACAAAATTACCCACCTTTTCCAGAACCCTTTGTTCAATATATCTCCAAGTTTGGTACTGTGCAGGATGCTGATGACTTTCTGAAGGTTCTTAGTTCAAAAGAATATCCTTCCGTGTCTGCTTATCTTCATATTTTCAATTCATTTTTCAATGAAGGCAGATATTCTGAGGCCAAAGATCTGCTCTTTAAATGCCCACATCACATTCGAAAGCATAACGAAGTTTGTAAGCTCTTTGGATCTGCAGAAAGCAAAACCACCGGTGCCACTTAATCTTCCTCCAATCCGATTGAAACTTAATCATCACATAGAACAAATATCAACTACACATCAGGTGAAATTTCTTGTGACTATGTTCCTACTTGTTTTTAGTCATGAGATTTGGTTCAGCTGTCAAGGATTCAATCAACAACAGACTGTTGAAGTGTATGCGTTTCAATTTGCAAAAAACCAGTAGGCCAGTCGTTGTTCTGACAGAAAAGAGGTGCCTCATGCTGTGGTCTTTACGCTTGTGATTCTTTGGAGCAGTTTGATTCATTGGTTCATTCATTCATCATAACTTATTTGCTTGCTAATATATATACCGCAATGACAAAATGCAAGTCTCTGGGTTTAGAAATGAGAGCAATACAAGATTTGCCCTTCTTCCATTTTCTTTTAGAGCCAGTACTTCTGTTTACATTCTTCATTTGTATTGCAATATCCCATCTTCTGATCAGGCAACAATATCTTCTTTCATCTTCATATTATATGATAAAACCCTGCATCGTGGAAGCAAATGTGATGTTAATGCTTGAAGGGAAGGGTTTGCCATTTATTTCTGTTCCTGTATAATTGCTTCTGCTTGTAACTCTCTAATCAAGTTCTACAATAGCTTGAGAGAGTTTGATAAATACAATAAGCTGCAATTTATGGGCTTGTGCTGCCACGAGAGCTTTCTGGAACTGTTTCATTTTCAATTGATATCAGTGTACCGAGGCCTAAAGCCTAAAGTTTGTCCACTTTGCCACACCTTTTATAATCTTGTTCTTAATACATGACACCCAAAGTGGACAAAAATTATCAATTTATGAATTACTTCATGGACTAACGGTTAGAAAATTCTAAAACCGATGCCGACCAATTGATGTTCACC

Coding sequence (CDS)

ATGACGAGAAGAAACGCAATTTTCACTTCCCTCAGATTGGCAAATTCCTTCTTTTCGACTCGGTCTCGATATCCCCAGCTTGGTATTGCATTATCAGATAACTTTGTAATTAGAGTGTTGAAGGAACTTCGAAATTCTCCATTGAAAGCCTTGAGTTTTTTTAATTGGGTTGGTTGTAGGCCGGATTATGATCATAACACAGTTTCATACAATGCCATTGCCAGGGTTCTTGCACGGAATGACTCGATCAAGGCTTTTTGGGGCGTGATTGAAGAAATGAAGAATGCTAGTCTTGATATTGATATCGACACTTACATAAAGATCTCCAGGCAGTTTCAAAAGAGCAAGATGATGGGTGATGCTGTCAAGCTTTATGAGCTTATGATGGATGGGCCATACAAGCCCTCATTGCCAGATTGCAGCATTCTTTTGCGGACCATCGCTGCTAGTGACAATCCAGATTTGAGCTTGGTTTACAGAGTGGCCAAGAAATTTGAGGCTTCAGGGTACAGTCTCTCCAAAGCTATTTACGACGGAATCCATAGGTCGTTGACAAGCAGAGGAAAGTTTGATGATGCGGAGGATATCGTAAAGTCTATGAGAAATGCAGGATATGAACCTGATAATGTTACATTCAGCCAACTGGTATTTGGACTTTGCAAGGCTAGGAGACTTAAGGAAGCCCGTGAAGTGCTGGATGAGATGGAAGCACAAGGATGTATTCCCGATATCAAGACTTGGACTGTTTTAATTCAAGGACATTGTAATGCCAATAAACTTGACGTTGCTTTAGTTTGTTTTGCAAAGATGATAGAGAAGAACTGTGATCCAGATGCTGATCTTTTGGATGTGTTGATCAATGGTTTCCTTAGCCAGAAAAAGTTAGATGGTGCTTATCAGTTGCTGATTGAGTTGACGAATAAGGCTCATGTAAGACCATGGCAGGCAACATACAAACACTTAATTAAAAATCTTTTGGAAGTTAGAAAACTTGAGGAAGCCATGGCCCTCCTTCGTTTAATGAAGAAACAAAATTACCCACCTTTTCCAGAACCCTTTGTTCAATATATCTCCAAGTTTGGTACTGTGCAGGATGCTGATGACTTTCTGAAGGTTCTTAGTTCAAAAGAATATCCTTCCGTGTCTGCTTATCTTCATATTTTCAATTCATTTTTCAATGAAGGCAGATATTCTGAGGCCAAAGATCTGCTCTTTAAATGCCCACATCACATTCGAAAGCATAACGAAGTTTGTAAGCTCTTTGGATCTGCAGAAAGCAAAACCACCGGTGCCACTTAA

Protein sequence

MTRRNAIFTSLRLANSFFSTRSRYPQLGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKAFWGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLRTIAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGYEPDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALVCFAKMIEKNCDPDADLLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNLLEVRKLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESKTTGAT
Homology
BLAST of Cmc02g0058601 vs. NCBI nr
Match: XP_008464511.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Cucumis melo] >TYJ98503.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 822.4 bits (2123), Expect = 1.8e-234
Identity = 406/407 (99.75%), Postives = 407/407 (100.00%), Query Frame = 0

Query: 26  QLGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKA 85
           +LGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKA
Sbjct: 217 ELGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKA 276

Query: 86  FWGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLR 145
           FWGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLR
Sbjct: 277 FWGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLR 336

Query: 146 TIAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGY 205
           TIAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGY
Sbjct: 337 TIAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGY 396

Query: 206 EPDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALV 265
           EPDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALV
Sbjct: 397 EPDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALV 456

Query: 266 CFAKMIEKNCDPDADLLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNL 325
           CFAKMIEKNCDPDADLLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNL
Sbjct: 457 CFAKMIEKNCDPDADLLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNL 516

Query: 326 LEVRKLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYL 385
           LEVRKLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYL
Sbjct: 517 LEVRKLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYL 576

Query: 386 HIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESKTTGAT 433
           HIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESKTTGAT
Sbjct: 577 HIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESKTTGAT 623

BLAST of Cmc02g0058601 vs. NCBI nr
Match: XP_008464511.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Cucumis melo] >TYJ98503.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 53.5 bits (127), Expect = 5.2e-03
Identity = 26/27 (96.30%), Postives = 27/27 (100.00%), Query Frame = 0

Query: 1  MTRRNAIFTSLRLANSFFSTRSRYPQL 28
          MTRRNAIFTSLRLANSFFSTRSRYPQ+
Sbjct: 1  MTRRNAIFTSLRLANSFFSTRSRYPQV 27


HSP 2 Score: 822.4 bits (2123), Expect = 1.8e-234
Identity = 406/407 (99.75%), Postives = 407/407 (100.00%), Query Frame = 0

Query: 26  QLGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKA 85
           +LGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKA
Sbjct: 217 ELGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKA 276

Query: 86  FWGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLR 145
           FWGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLR
Sbjct: 277 FWGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLR 336

Query: 146 TIAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGY 205
           TIAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGY
Sbjct: 337 TIAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGY 396

Query: 206 EPDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALV 265
           EPDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALV
Sbjct: 397 EPDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALV 456

Query: 266 CFAKMIEKNCDPDADLLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNL 325
           CFAKMIEKNCDPDADLLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNL
Sbjct: 457 CFAKMIEKNCDPDADLLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNL 516

Query: 326 LEVRKLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYL 385
           LEVRKLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYL
Sbjct: 517 LEVRKLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYL 576

Query: 386 HIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESKTTGAT 433
           HIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESKTTGAT
Sbjct: 577 HIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESKTTGAT 623

BLAST of Cmc02g0058601 vs. NCBI nr
Match: KAA0057819.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 53.5 bits (127), Expect = 5.2e-03
Identity = 26/27 (96.30%), Postives = 27/27 (100.00%), Query Frame = 0

Query: 1  MTRRNAIFTSLRLANSFFSTRSRYPQL 28
          MTRRNAIFTSLRLANSFFSTRSRYPQ+
Sbjct: 1  MTRRNAIFTSLRLANSFFSTRSRYPQV 27


HSP 2 Score: 776.2 bits (2003), Expect = 1.5e-220
Identity = 378/407 (92.87%), Postives = 400/407 (98.28%), Query Frame = 0

Query: 26  QLGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKA 85
           +LGIALSDNFVIRVLKELRNSPLKALSFF+WVGCRPDYDHNTVSYNAIARVL R+DSI+A
Sbjct: 217 ELGIALSDNFVIRVLKELRNSPLKALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEA 276

Query: 86  FWGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLR 145
           FWGVIEEMK+A+ +IDIDTYIKISRQFQKSKMMG+AVKLYELMMDGPYKPSL DCS+LLR
Sbjct: 277 FWGVIEEMKHANHEIDIDTYIKISRQFQKSKMMGEAVKLYELMMDGPYKPSLQDCSVLLR 336

Query: 146 TIAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGY 205
           TIAASDNPDLSLVYRVAKKFEA+GYSLSKA+YDGIHRSLTS GKFDDAE+IVKSMRNAGY
Sbjct: 337 TIAASDNPDLSLVYRVAKKFEATGYSLSKAMYDGIHRSLTSTGKFDDAENIVKSMRNAGY 396

Query: 206 EPDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALV 265
           EPDNVT+SQLVFGLCKARRL+EAR+VLDEMEAQGCIPDIKTWT+LIQGHCNAN+LD+ALV
Sbjct: 397 EPDNVTYSQLVFGLCKARRLEEARKVLDEMEAQGCIPDIKTWTILIQGHCNANELDIALV 456

Query: 266 CFAKMIEKNCDPDADLLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNL 325
           CFAKMIEKNCDPDADLLDVLI+GFL+QKKL+GAYQLLIELTNKAHVRPWQATYK LIKNL
Sbjct: 457 CFAKMIEKNCDPDADLLDVLISGFLNQKKLNGAYQLLIELTNKAHVRPWQATYKQLIKNL 516

Query: 326 LEVRKLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYL 385
           LEVRKLEEA+ALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYL
Sbjct: 517 LEVRKLEEAIALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYL 576

Query: 386 HIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESKTTGAT 433
           HIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAES TT AT
Sbjct: 577 HIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESNTTAAT 623

BLAST of Cmc02g0058601 vs. NCBI nr
Match: XP_004138087.1 (pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Cucumis sativus] >KGN63535.1 hypothetical protein Csa_013352 [Cucumis sativus])

HSP 1 Score: 53.5 bits (127), Expect = 5.2e-03
Identity = 26/27 (96.30%), Postives = 27/27 (100.00%), Query Frame = 0

Query: 1  MTRRNAIFTSLRLANSFFSTRSRYPQL 28
          MTRRNAIFTSLRLANSFFSTRSRYPQ+
Sbjct: 1  MTRRNAIFTSLRLANSFFSTRSRYPQV 27


HSP 2 Score: 736.5 bits (1900), Expect = 1.3e-208
Identity = 352/406 (86.70%), Postives = 388/406 (95.57%), Query Frame = 0

Query: 27  LGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKAF 86
           LGI LSD+FVIRVLKELRN PLK LSFF+WVGCRPDYDHNTV+YNAIARVL R+DSI+AF
Sbjct: 217 LGIVLSDSFVIRVLKELRNFPLKGLSFFHWVGCRPDYDHNTVTYNAIARVLGRDDSIEAF 276

Query: 87  WGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLRT 146
           WG++EEMKNA  +IDIDTYIKISRQFQ+SKMMGDAVKLYELMMDGPYKPSL DCS+LLR+
Sbjct: 277 WGLVEEMKNAGHEIDIDTYIKISRQFQRSKMMGDAVKLYELMMDGPYKPSLQDCSVLLRS 336

Query: 147 IAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGYE 206
           I+ASDNPDLSLV+RVAKKFEA+GYSLSKA+YDGIHRSLTS GKFD+AE+IVKSMRNAGYE
Sbjct: 337 ISASDNPDLSLVFRVAKKFEATGYSLSKAVYDGIHRSLTSAGKFDEAENIVKSMRNAGYE 396

Query: 207 PDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALVC 266
           PDNVT+SQLVFGLCKARRL+EA EVLDEMEAQGC+PDIKTWT+LIQGHC AN++D ALVC
Sbjct: 397 PDNVTYSQLVFGLCKARRLEEACEVLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVC 456

Query: 267 FAKMIEKNCDPDADLLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNLL 326
           FAKMIEKNCDPDADLLDVLI+GFL QKKLDGAYQLLIEL NKAH+RPWQATYKHLI+ LL
Sbjct: 457 FAKMIEKNCDPDADLLDVLISGFLGQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLL 516

Query: 327 EVRKLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLH 386
           EVRKLEEA++LLRLMKKQNYPPFPEPFVQYISKFGTV+DA +FLK LSSKEYPS+SAYLH
Sbjct: 517 EVRKLEEAISLLRLMKKQNYPPFPEPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLH 576

Query: 387 IFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESKTTGAT 433
           +FNSFFNEGR+SEAKDLLFKCPHHIRKH+E+CKLFGSAESK+T  T
Sbjct: 577 VFNSFFNEGRHSEAKDLLFKCPHHIRKHSEICKLFGSAESKSTTTT 622

BLAST of Cmc02g0058601 vs. NCBI nr
Match: XP_023530746.1 (pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 736.5 bits (1900), Expect = 1.3e-208
Identity = 353/406 (86.95%), Postives = 388/406 (95.57%), Query Frame = 0

Query: 27  LGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKAF 86
           LGI LSD+FVIRVLKELRN PLK LSFF+WVGCRPDYDHNTV+YNAIARVL R+DSI+AF
Sbjct: 217 LGIVLSDSFVIRVLKELRNFPLKGLSFFHWVGCRPDYDHNTVTYNAIARVLGRDDSIEAF 276

Query: 87  WGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLRT 146
           WG++EEMKNA  +IDIDTYIKISRQFQ+SKMMGDAVKLYELMMDGPYKPSL DCS+LLR+
Sbjct: 277 WGLVEEMKNAGHEIDIDTYIKISRQFQRSKMMGDAVKLYELMMDGPYKPSLQDCSVLLRS 336

Query: 147 IAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGYE 206
           I+ASDNPDLSLV+RVAKKFEA+GYSLSKA+YDGIHRSLTS GKFD+AE+IVKSMRNAGYE
Sbjct: 337 ISASDNPDLSLVFRVAKKFEATGYSLSKAVYDGIHRSLTSAGKFDEAENIVKSMRNAGYE 396

Query: 207 PDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALVC 266
           PDNVT+SQLVFGLCKARRL+EA EVLDEMEAQGC+PDIKTWT+LIQGHC AN++D ALVC
Sbjct: 397 PDNVTYSQLVFGLCKARRLEEACEVLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVC 456

Query: 267 FAKMIEKNCDPDADLLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNLL 326
           FAKMIEKNCDPDADLLDVLI+GFL QKKLDGAYQLLIEL NKAH+RPWQATYKHLI+ LL
Sbjct: 457 FAKMIEKNCDPDADLLDVLISGFLGQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLL 516

Query: 327 EVRKLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLH 386
           EVRKLEEA++LLRLMKKQNYPPFPEPFVQYISKFGTV+DA +FLK LSSKEYPS+SAYLH
Sbjct: 517 EVRKLEEAISLLRLMKKQNYPPFPEPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLH 576

Query: 387 IFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESKTTGAT 433
           IFNSFFNEGR+SEAKDLLFKCPHHIRKH+E+CKLFGSAESK+T  T
Sbjct: 577 IFNSFFNEGRHSEAKDLLFKCPHHIRKHSEICKLFGSAESKSTTPT 622

BLAST of Cmc02g0058601 vs. ExPASy Swiss-Prot
Match: Q9STK5 (Pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g48250 PE=2 SV=1)

HSP 1 Score: 536.2 bits (1380), Expect = 3.4e-151
Identity = 251/402 (62.44%), Postives = 325/402 (80.85%), Query Frame = 0

Query: 26  QLGIALSDNFVIRVLKELRNSPLKALSFFNWV---GCRPDYDHNTVSYNAIARVLARNDS 85
           ++ + LSDNFVIRVLKELR  PLKAL+FF+WV   G    Y H+TV+YNA  RVLAR +S
Sbjct: 219 EMKLVLSDNFVIRVLKELREHPLKALAFFHWVGGGGSSSGYQHSTVTYNAALRVLARPNS 278

Query: 86  IKAFWGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSI 145
           +  FW V++EMK A  D+D+DTYIK+SRQFQKS+MM + VKLYE MMDGP+KPS+ DCS+
Sbjct: 279 VAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSL 338

Query: 146 LLRTIAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRN 205
           LLR ++ S NPDL LV+RV++K+E++G SLSKA+YDGIHRSLTS G+FD+AE+I K+MRN
Sbjct: 339 LLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRN 398

Query: 206 AGYEPDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDV 265
           AGYEPDN+T+SQLVFGLCKA+RL+EAR VLD+MEAQGC PDIKTWT+LIQGHC  N+LD 
Sbjct: 399 AGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDK 458

Query: 266 ALVCFAKMIEKNCDPDADLLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLI 325
           AL CFA M+EK  D D++LLDVLI+GF+   K +GA   L+E+   A+V+PWQ+TYK LI
Sbjct: 459 ALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLI 518

Query: 326 KNLLEVRKLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVS 385
             LL+++K EEA+ LL++MKKQNYP + E F  Y++KFGT++DA  FL VLSSK+ PS +
Sbjct: 519 DKLLKIKKSEEALDLLQMMKKQNYPAYAEAFDGYLAKFGTLEDAKKFLDVLSSKDSPSFA 578

Query: 386 AYLHIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSA 425
           AY H+  +F+ EGR ++AK+LLF CPHH + H ++ +LFG+A
Sbjct: 579 AYFHVIEAFYREGRLTDAKNLLFICPHHFKTHPKISELFGAA 620

BLAST of Cmc02g0058601 vs. ExPASy Swiss-Prot
Match: Q9M891 (Pentatricopeptide repeat-containing protein At3g02490, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g02490 PE=2 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 4.2e-64
Identity = 136/405 (33.58%), Postives = 229/405 (56.54%), Query Frame = 0

Query: 27  LGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKAF 86
           L +    + V  VL++L   P KAL FF W+     + H+  +YNA+ARVL +   +  F
Sbjct: 241 LKLEFKSDVVKMVLEKLDVDPRKALLFFRWIDESGSFKHDEKTYNAMARVLGKEKFLDRF 300

Query: 87  WGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYK--PSLPDCSILL 146
             +IEE+++A  +++++TY+++S +F ++KM+ +AV+L+E  M G     P+   CS+LL
Sbjct: 301 QHMIEEIRSAGYEMEMETYVRVSARFCQTKMIKEAVELFEFAMAGSISNTPTPHCCSLLL 360

Query: 147 RTIAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAG 206
           + I  +   D+ L  R  K +  +G  +   +   + +SL S  +F  + +++K+M   G
Sbjct: 361 KKIVTAKKLDMDLFTRTLKAYTGNGNVVPDVMLQHVLKSLRSVDRFGQSNEVLKAMNEGG 420

Query: 207 YEPDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVAL 266
           Y P     S +  GL +  +  EA E+++ MEA G   D K    L++GHC+A  L+ A 
Sbjct: 421 YVPSGDLQSVIASGLSRKGKKDEANELVNFMEASGNHLDDKAMASLVEGHCDAKDLEEAS 480

Query: 267 VCFAKMIEKNCDPDAD-LLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIK 326
            CF KMI K     A    + L+  + +  +    Y+L  EL  +  ++PW +TYK +++
Sbjct: 481 ECFKKMIGKEGVSYAGYAFEKLVLAYCNSFQARDVYKLFSELVKQNQLKPWHSTYKIMVR 540

Query: 327 NLLEVR-----KLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEY 386
           NLL  +       EEA++LL +M+   +PPF +PF+ Y+S  GT  +A  FLK ++SK++
Sbjct: 541 NLLMKKVARDGGFEEALSLLPMMRNHGFPPFVDPFMDYLSNSGTSAEAFAFLKAVTSKKF 600

Query: 387 PSVSAYLHIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGS 424
           PS S  L +F +     R+SEA+DLL   P +IR++ EV +LF +
Sbjct: 601 PSNSMVLRVFEAMLKSARHSEAQDLLSMSPSYIRRNAEVLELFNT 645

BLAST of Cmc02g0058601 vs. ExPASy Swiss-Prot
Match: Q8LPF1 (Pentatricopeptide repeat-containing protein At5g15980, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g15980 PE=2 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 3.9e-62
Identity = 131/410 (31.95%), Postives = 227/410 (55.37%), Query Frame = 0

Query: 23  RYPQLGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDS 82
           R   L +    + V  +++ L   P KAL FF W+     + H+  +YNA+ARVL +   
Sbjct: 243 RVRDLNVEFKSDLVKMIVERLDVEPRKALLFFRWIDESDLFKHDEKTYNAMARVLGKEKF 302

Query: 83  IKAFWGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPS--LPDC 142
           +  F  ++ EM++A  +++I+TY+++S +F ++K++ +AV L+E+ M G    +   P C
Sbjct: 303 LDRFQNIVVEMRSAGYEVEIETYVRVSTRFCQTKLIKEAVDLFEIAMAGSSSSNNPTPHC 362

Query: 143 -SILLRTIAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKS 202
             +LL+ I  +   D+ L  R  K +  +G +L+ ++   + +SL S  + + + +++K 
Sbjct: 363 FCLLLKKIVTAKILDMDLFSRAVKVYTKNGNALTDSLLKSVLKSLRSVDRVEQSNELLKE 422

Query: 203 MRNAGYEPDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANK 262
           M+  GY P     S +   L +  +  EA E +D ME+ G   D K    L++G+C++  
Sbjct: 423 MKRGGYVPSGDMQSMIASSLSRKGKKDEADEFVDFMESSGNNLDDKAMASLVEGYCDSGN 482

Query: 263 LDVALVCFAKMIEKNCDPDADL-LDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATY 322
           LD ALVCF KM+       AD   + L+  + ++ ++  AY+LL     K  ++P  +TY
Sbjct: 483 LDEALVCFEKMVGNTGVSYADYSFEKLVLAYCNKNQVRDAYKLLSAQVTKNQLKPRHSTY 542

Query: 323 KHLIKNLLEVR-----KLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVL 382
           K L+ NLL  +       EEA++LL +MK   +PPF +PF+ Y S  G   +A  FLK +
Sbjct: 543 KSLVTNLLTKKIARDGGFEEALSLLPIMKDHGFPPFIDPFMSYFSSTGKSTEALGFLKAM 602

Query: 383 SSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGS 424
           +S  +P +S  L +F +     R+SEA+DLL  CP++IR + +V +LF +
Sbjct: 603 TSNNFPYISVVLRVFETMMKSARHSEAQDLLSLCPNYIRNNPDVLELFNT 652

BLAST of Cmc02g0058601 vs. ExPASy Swiss-Prot
Match: Q9FH87 (Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis thaliana OX=3702 GN=At5g65820 PE=3 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 3.0e-30
Identity = 98/407 (24.08%), Postives = 189/407 (46.44%), Query Frame = 0

Query: 10  SLRLANSFFSTRSRYPQLGIALSDN-------FVIRVLKELRNSPLKALSFFNWVGCRPD 69
           S R+   F    SR P+L +AL+++        + RVL    ++      FF W   +P 
Sbjct: 86  SYRILRKF---HSRVPKLELALNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPR 145

Query: 70  YDHNTVSYNAIARVLARNDSIKAFWGVIEEMKNASLD-IDIDTYIKISRQFQKSKMMGDA 129
           Y H+   Y ++ ++L++     A WG+IEEM+  +   I+ + ++ + ++F  + M+  A
Sbjct: 146 YCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKA 205

Query: 130 VKLYELMMDGPYKPSLPDCSILLRTIAASDNPDLSLVYRVAKKFE--ASGYSLSKAIYDG 189
           +++ + M    ++P       LL  +    +     V   AK FE     + ++   +  
Sbjct: 206 IEVLDEMPKFGFEPDEYVFGCLLDALCKHGS-----VKDAAKLFEDMRMRFPVNLRYFTS 265

Query: 190 IHRSLTSRGKFDDAEDIVKSMRNAGYEPDNVTFSQLVFGLCKARRLKEAREVLDEMEAQG 249
           +       GK  +A+ ++  M  AG+EPD V ++ L+ G   A ++ +A ++L +M  +G
Sbjct: 266 LLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRG 325

Query: 250 CIPDIKTWTVLIQGHCNANKLDVALVCFAKMIEKNCDPDADLLDVLINGFLSQKKLDGAY 309
             P+   +TVLIQ  C  ++++ A+  F +M    C+ D      L++GF    K+D  Y
Sbjct: 326 FEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCY 385

Query: 310 QLLIELTNKAHVRPWQATYKHLIKNLLEVRKLEEAMALLRLMKKQNYPP---FPEPFVQY 369
            +L ++  K  + P + TY H++    +    EE + L+  M++  Y P        ++ 
Sbjct: 386 IVLDDMIKKG-LMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRL 445

Query: 370 ISKFGTVQDADDFLKVLSSKEY-PSVSAYLHIFNSFFNEGRYSEAKD 403
             K G V++A      +      P V  ++ + N   ++G   EA D
Sbjct: 446 ACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASD 483

BLAST of Cmc02g0058601 vs. ExPASy Swiss-Prot
Match: Q94JX6 (Pentatricopeptide repeat-containing protein At5g18390, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g18390 PE=2 SV=2)

HSP 1 Score: 131.3 bits (329), Expect = 2.6e-29
Identity = 97/382 (25.39%), Postives = 170/382 (44.50%), Query Frame = 0

Query: 27  LGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKAF 86
           L + ++  FV RVL+    S   +L FFNW    P Y   ++ Y  +A+ LA +   ++ 
Sbjct: 71  LRLPVTSEFVFRVLRATSRSSNDSLRFFNWARSNPSYTPTSMEYEELAKSLASHKKYESM 130

Query: 87  WGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLRT 146
           W ++++MK+ SLDI  +T   I  Q+ K+  +  AV+L+           +P      +T
Sbjct: 131 WKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFN---------GVP------KT 190

Query: 147 IAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGYE 206
           +      D                     +Y+ +  +L     F  A  +++ M   G +
Sbjct: 191 LGCQQTVD---------------------VYNSLLHALCDVKMFHGAYALIRRMIRKGLK 250

Query: 207 PDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALVC 266
           PD  T++ LV G C A ++KEA+E LDEM  +G  P  +   +LI+G  NA  L+ A   
Sbjct: 251 PDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEM 310

Query: 267 FAKMIEKNCDPDADLLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNLL 326
            +KM +    PD    ++LI       +++   ++      K  +     TYK LI  + 
Sbjct: 311 VSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTAC-KLGLCVDIDTYKTLIPAVS 370

Query: 327 EVRKLEEAMALLRLMKKQNYPPFPE---PFVQYISKFGTVQDADDFLKVLSSKEY-PSVS 386
           ++ K++EA  LL    +  + PFP    P ++ + + G   DA  F   +  K + P+  
Sbjct: 371 KIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRP 415

Query: 387 AYLHIFNSFFNEGRYSEAKDLL 405
            Y  +       G++ +A + L
Sbjct: 431 VYTMLITMCGRGGKFVDAANYL 415

BLAST of Cmc02g0058601 vs. ExPASy TrEMBL
Match: A0A5D3BGX0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001060 PE=4 SV=1)

HSP 1 Score: 822.4 bits (2123), Expect = 8.9e-235
Identity = 406/407 (99.75%), Postives = 407/407 (100.00%), Query Frame = 0

Query: 26  QLGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKA 85
           +LGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKA
Sbjct: 217 ELGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKA 276

Query: 86  FWGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLR 145
           FWGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLR
Sbjct: 277 FWGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLR 336

Query: 146 TIAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGY 205
           TIAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGY
Sbjct: 337 TIAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGY 396

Query: 206 EPDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALV 265
           EPDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALV
Sbjct: 397 EPDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALV 456

Query: 266 CFAKMIEKNCDPDADLLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNL 325
           CFAKMIEKNCDPDADLLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNL
Sbjct: 457 CFAKMIEKNCDPDADLLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNL 516

Query: 326 LEVRKLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYL 385
           LEVRKLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYL
Sbjct: 517 LEVRKLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYL 576

Query: 386 HIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESKTTGAT 433
           HIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESKTTGAT
Sbjct: 577 HIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESKTTGAT 623

BLAST of Cmc02g0058601 vs. ExPASy TrEMBL
Match: A0A5D3BGX0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001060 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.5e-03
Identity = 26/27 (96.30%), Postives = 27/27 (100.00%), Query Frame = 0

Query: 1  MTRRNAIFTSLRLANSFFSTRSRYPQL 28
          MTRRNAIFTSLRLANSFFSTRSRYPQ+
Sbjct: 1  MTRRNAIFTSLRLANSFFSTRSRYPQV 27


HSP 2 Score: 822.4 bits (2123), Expect = 8.9e-235
Identity = 406/407 (99.75%), Postives = 407/407 (100.00%), Query Frame = 0

Query: 26  QLGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKA 85
           +LGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKA
Sbjct: 217 ELGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKA 276

Query: 86  FWGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLR 145
           FWGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLR
Sbjct: 277 FWGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLR 336

Query: 146 TIAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGY 205
           TIAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGY
Sbjct: 337 TIAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGY 396

Query: 206 EPDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALV 265
           EPDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALV
Sbjct: 397 EPDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALV 456

Query: 266 CFAKMIEKNCDPDADLLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNL 325
           CFAKMIEKNCDPDADLLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNL
Sbjct: 457 CFAKMIEKNCDPDADLLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNL 516

Query: 326 LEVRKLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYL 385
           LEVRKLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYL
Sbjct: 517 LEVRKLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYL 576

Query: 386 HIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESKTTGAT 433
           HIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESKTTGAT
Sbjct: 577 HIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESKTTGAT 623

BLAST of Cmc02g0058601 vs. ExPASy TrEMBL
Match: A0A5A7UW70 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G001030 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.5e-03
Identity = 26/27 (96.30%), Postives = 27/27 (100.00%), Query Frame = 0

Query: 1  MTRRNAIFTSLRLANSFFSTRSRYPQL 28
          MTRRNAIFTSLRLANSFFSTRSRYPQ+
Sbjct: 1  MTRRNAIFTSLRLANSFFSTRSRYPQV 27


HSP 2 Score: 822.4 bits (2123), Expect = 8.9e-235
Identity = 406/407 (99.75%), Postives = 407/407 (100.00%), Query Frame = 0

Query: 26  QLGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKA 85
           +LGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKA
Sbjct: 217 ELGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKA 276

Query: 86  FWGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLR 145
           FWGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLR
Sbjct: 277 FWGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLR 336

Query: 146 TIAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGY 205
           TIAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGY
Sbjct: 337 TIAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGY 396

Query: 206 EPDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALV 265
           EPDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALV
Sbjct: 397 EPDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALV 456

Query: 266 CFAKMIEKNCDPDADLLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNL 325
           CFAKMIEKNCDPDADLLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNL
Sbjct: 457 CFAKMIEKNCDPDADLLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNL 516

Query: 326 LEVRKLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYL 385
           LEVRKLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYL
Sbjct: 517 LEVRKLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYL 576

Query: 386 HIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESKTTGAT 433
           HIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESKTTGAT
Sbjct: 577 HIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESKTTGAT 623

BLAST of Cmc02g0058601 vs. ExPASy TrEMBL
Match: A0A1S3CLM3 (pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502372 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.5e-03
Identity = 26/27 (96.30%), Postives = 27/27 (100.00%), Query Frame = 0

Query: 1  MTRRNAIFTSLRLANSFFSTRSRYPQL 28
          MTRRNAIFTSLRLANSFFSTRSRYPQ+
Sbjct: 1  MTRRNAIFTSLRLANSFFSTRSRYPQV 27


HSP 2 Score: 776.2 bits (2003), Expect = 7.3e-221
Identity = 378/407 (92.87%), Postives = 400/407 (98.28%), Query Frame = 0

Query: 26  QLGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKA 85
           +LGIALSDNFVIRVLKELRNSPLKALSFF+WVGCRPDYDHNTVSYNAIARVL R+DSI+A
Sbjct: 217 ELGIALSDNFVIRVLKELRNSPLKALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEA 276

Query: 86  FWGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLR 145
           FWGVIEEMK+A+ +IDIDTYIKISRQFQKSKMMG+AVKLYELMMDGPYKPSL DCS+LLR
Sbjct: 277 FWGVIEEMKHANHEIDIDTYIKISRQFQKSKMMGEAVKLYELMMDGPYKPSLQDCSVLLR 336

Query: 146 TIAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGY 205
           TIAASDNPDLSLVYRVAKKFEA+GYSLSKA+YDGIHRSLTS GKFDDAE+IVKSMRNAGY
Sbjct: 337 TIAASDNPDLSLVYRVAKKFEATGYSLSKAMYDGIHRSLTSTGKFDDAENIVKSMRNAGY 396

Query: 206 EPDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALV 265
           EPDNVT+SQLVFGLCKARRL+EAR+VLDEMEAQGCIPDIKTWT+LIQGHCNAN+LD+ALV
Sbjct: 397 EPDNVTYSQLVFGLCKARRLEEARKVLDEMEAQGCIPDIKTWTILIQGHCNANELDIALV 456

Query: 266 CFAKMIEKNCDPDADLLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNL 325
           CFAKMIEKNCDPDADLLDVLI+GFL+QKKL+GAYQLLIELTNKAHVRPWQATYK LIKNL
Sbjct: 457 CFAKMIEKNCDPDADLLDVLISGFLNQKKLNGAYQLLIELTNKAHVRPWQATYKQLIKNL 516

Query: 326 LEVRKLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYL 385
           LEVRKLEEA+ALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYL
Sbjct: 517 LEVRKLEEAIALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYL 576

Query: 386 HIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESKTTGAT 433
           HIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAES TT AT
Sbjct: 577 HIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESNTTAAT 623

BLAST of Cmc02g0058601 vs. ExPASy TrEMBL
Match: A0A0A0LNT7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G003530 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.5e-03
Identity = 26/27 (96.30%), Postives = 27/27 (100.00%), Query Frame = 0

Query: 1  MTRRNAIFTSLRLANSFFSTRSRYPQL 28
          MTRRNAIFTSLRLANSFFSTRSRYPQ+
Sbjct: 1  MTRRNAIFTSLRLANSFFSTRSRYPQV 27


HSP 2 Score: 736.5 bits (1900), Expect = 6.4e-209
Identity = 352/406 (86.70%), Postives = 388/406 (95.57%), Query Frame = 0

Query: 27  LGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKAF 86
           LGI LSD+FVIRVLKELRN PLK LSFF+WVGCRPDYDHNTV+YNAIARVL R+DSI+AF
Sbjct: 217 LGIVLSDSFVIRVLKELRNFPLKGLSFFHWVGCRPDYDHNTVTYNAIARVLGRDDSIEAF 276

Query: 87  WGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLRT 146
           WG++EEMKNA  +IDIDTYIKISRQFQ+SKMMGDAVKLYELMMDGPYKPSL DCS+LLR+
Sbjct: 277 WGLVEEMKNAGHEIDIDTYIKISRQFQRSKMMGDAVKLYELMMDGPYKPSLQDCSVLLRS 336

Query: 147 IAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGYE 206
           I+ASDNPDLSLV+RVAKKFEA+GYSLSKA+YDGIHRSLTS GKFD+AE+IVKSMRNAGYE
Sbjct: 337 ISASDNPDLSLVFRVAKKFEATGYSLSKAVYDGIHRSLTSAGKFDEAENIVKSMRNAGYE 396

Query: 207 PDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALVC 266
           PDNVT+SQLVFGLCKARRL+EA EVLDEMEAQGC+PDIKTWT+LIQGHC AN++D ALVC
Sbjct: 397 PDNVTYSQLVFGLCKARRLEEACEVLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVC 456

Query: 267 FAKMIEKNCDPDADLLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNLL 326
           FAKMIEKNCDPDADLLDVLI+GFL QKKLDGAYQLLIEL NKAH+RPWQATYKHLI+ LL
Sbjct: 457 FAKMIEKNCDPDADLLDVLISGFLGQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLL 516

Query: 327 EVRKLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLH 386
           EVRKLEEA++LLRLMKKQNYPPFPEPFVQYISKFGTV+DA +FLK LSSKEYPS+SAYLH
Sbjct: 517 EVRKLEEAISLLRLMKKQNYPPFPEPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLH 576

Query: 387 IFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESKTTGAT 433
           +FNSFFNEGR+SEAKDLLFKCPHHIRKH+E+CKLFGSAESK+T  T
Sbjct: 577 VFNSFFNEGRHSEAKDLLFKCPHHIRKHSEICKLFGSAESKSTTTT 622

BLAST of Cmc02g0058601 vs. TAIR 10
Match: AT3G48250.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 536.2 bits (1380), Expect = 2.4e-152
Identity = 251/402 (62.44%), Postives = 325/402 (80.85%), Query Frame = 0

Query: 26  QLGIALSDNFVIRVLKELRNSPLKALSFFNWV---GCRPDYDHNTVSYNAIARVLARNDS 85
           ++ + LSDNFVIRVLKELR  PLKAL+FF+WV   G    Y H+TV+YNA  RVLAR +S
Sbjct: 219 EMKLVLSDNFVIRVLKELREHPLKALAFFHWVGGGGSSSGYQHSTVTYNAALRVLARPNS 278

Query: 86  IKAFWGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSI 145
           +  FW V++EMK A  D+D+DTYIK+SRQFQKS+MM + VKLYE MMDGP+KPS+ DCS+
Sbjct: 279 VAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSL 338

Query: 146 LLRTIAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRN 205
           LLR ++ S NPDL LV+RV++K+E++G SLSKA+YDGIHRSLTS G+FD+AE+I K+MRN
Sbjct: 339 LLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRN 398

Query: 206 AGYEPDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDV 265
           AGYEPDN+T+SQLVFGLCKA+RL+EAR VLD+MEAQGC PDIKTWT+LIQGHC  N+LD 
Sbjct: 399 AGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDK 458

Query: 266 ALVCFAKMIEKNCDPDADLLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLI 325
           AL CFA M+EK  D D++LLDVLI+GF+   K +GA   L+E+   A+V+PWQ+TYK LI
Sbjct: 459 ALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLI 518

Query: 326 KNLLEVRKLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVS 385
             LL+++K EEA+ LL++MKKQNYP + E F  Y++KFGT++DA  FL VLSSK+ PS +
Sbjct: 519 DKLLKIKKSEEALDLLQMMKKQNYPAYAEAFDGYLAKFGTLEDAKKFLDVLSSKDSPSFA 578

Query: 386 AYLHIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSA 425
           AY H+  +F+ EGR ++AK+LLF CPHH + H ++ +LFG+A
Sbjct: 579 AYFHVIEAFYREGRLTDAKNLLFICPHHFKTHPKISELFGAA 620

BLAST of Cmc02g0058601 vs. TAIR 10
Match: AT3G02490.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 246.9 bits (629), Expect = 3.0e-65
Identity = 136/405 (33.58%), Postives = 229/405 (56.54%), Query Frame = 0

Query: 27  LGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKAF 86
           L +    + V  VL++L   P KAL FF W+     + H+  +YNA+ARVL +   +  F
Sbjct: 241 LKLEFKSDVVKMVLEKLDVDPRKALLFFRWIDESGSFKHDEKTYNAMARVLGKEKFLDRF 300

Query: 87  WGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYK--PSLPDCSILL 146
             +IEE+++A  +++++TY+++S +F ++KM+ +AV+L+E  M G     P+   CS+LL
Sbjct: 301 QHMIEEIRSAGYEMEMETYVRVSARFCQTKMIKEAVELFEFAMAGSISNTPTPHCCSLLL 360

Query: 147 RTIAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAG 206
           + I  +   D+ L  R  K +  +G  +   +   + +SL S  +F  + +++K+M   G
Sbjct: 361 KKIVTAKKLDMDLFTRTLKAYTGNGNVVPDVMLQHVLKSLRSVDRFGQSNEVLKAMNEGG 420

Query: 207 YEPDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVAL 266
           Y P     S +  GL +  +  EA E+++ MEA G   D K    L++GHC+A  L+ A 
Sbjct: 421 YVPSGDLQSVIASGLSRKGKKDEANELVNFMEASGNHLDDKAMASLVEGHCDAKDLEEAS 480

Query: 267 VCFAKMIEKNCDPDAD-LLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIK 326
            CF KMI K     A    + L+  + +  +    Y+L  EL  +  ++PW +TYK +++
Sbjct: 481 ECFKKMIGKEGVSYAGYAFEKLVLAYCNSFQARDVYKLFSELVKQNQLKPWHSTYKIMVR 540

Query: 327 NLLEVR-----KLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEY 386
           NLL  +       EEA++LL +M+   +PPF +PF+ Y+S  GT  +A  FLK ++SK++
Sbjct: 541 NLLMKKVARDGGFEEALSLLPMMRNHGFPPFVDPFMDYLSNSGTSAEAFAFLKAVTSKKF 600

Query: 387 PSVSAYLHIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGS 424
           PS S  L +F +     R+SEA+DLL   P +IR++ EV +LF +
Sbjct: 601 PSNSMVLRVFEAMLKSARHSEAQDLLSMSPSYIRRNAEVLELFNT 645

BLAST of Cmc02g0058601 vs. TAIR 10
Match: AT5G15980.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 240.4 bits (612), Expect = 2.8e-63
Identity = 131/410 (31.95%), Postives = 227/410 (55.37%), Query Frame = 0

Query: 23  RYPQLGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDS 82
           R   L +    + V  +++ L   P KAL FF W+     + H+  +YNA+ARVL +   
Sbjct: 243 RVRDLNVEFKSDLVKMIVERLDVEPRKALLFFRWIDESDLFKHDEKTYNAMARVLGKEKF 302

Query: 83  IKAFWGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPS--LPDC 142
           +  F  ++ EM++A  +++I+TY+++S +F ++K++ +AV L+E+ M G    +   P C
Sbjct: 303 LDRFQNIVVEMRSAGYEVEIETYVRVSTRFCQTKLIKEAVDLFEIAMAGSSSSNNPTPHC 362

Query: 143 -SILLRTIAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKS 202
             +LL+ I  +   D+ L  R  K +  +G +L+ ++   + +SL S  + + + +++K 
Sbjct: 363 FCLLLKKIVTAKILDMDLFSRAVKVYTKNGNALTDSLLKSVLKSLRSVDRVEQSNELLKE 422

Query: 203 MRNAGYEPDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANK 262
           M+  GY P     S +   L +  +  EA E +D ME+ G   D K    L++G+C++  
Sbjct: 423 MKRGGYVPSGDMQSMIASSLSRKGKKDEADEFVDFMESSGNNLDDKAMASLVEGYCDSGN 482

Query: 263 LDVALVCFAKMIEKNCDPDADL-LDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATY 322
           LD ALVCF KM+       AD   + L+  + ++ ++  AY+LL     K  ++P  +TY
Sbjct: 483 LDEALVCFEKMVGNTGVSYADYSFEKLVLAYCNKNQVRDAYKLLSAQVTKNQLKPRHSTY 542

Query: 323 KHLIKNLLEVR-----KLEEAMALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVL 382
           K L+ NLL  +       EEA++LL +MK   +PPF +PF+ Y S  G   +A  FLK +
Sbjct: 543 KSLVTNLLTKKIARDGGFEEALSLLPIMKDHGFPPFIDPFMSYFSSTGKSTEALGFLKAM 602

Query: 383 SSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGS 424
           +S  +P +S  L +F +     R+SEA+DLL  CP++IR + +V +LF +
Sbjct: 603 TSNNFPYISVVLRVFETMMKSARHSEAQDLLSLCPNYIRNNPDVLELFNT 652

BLAST of Cmc02g0058601 vs. TAIR 10
Match: AT5G65820.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 134.4 bits (337), Expect = 2.1e-31
Identity = 98/407 (24.08%), Postives = 189/407 (46.44%), Query Frame = 0

Query: 10  SLRLANSFFSTRSRYPQLGIALSDN-------FVIRVLKELRNSPLKALSFFNWVGCRPD 69
           S R+   F    SR P+L +AL+++        + RVL    ++      FF W   +P 
Sbjct: 86  SYRILRKF---HSRVPKLELALNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPR 145

Query: 70  YDHNTVSYNAIARVLARNDSIKAFWGVIEEMKNASLD-IDIDTYIKISRQFQKSKMMGDA 129
           Y H+   Y ++ ++L++     A WG+IEEM+  +   I+ + ++ + ++F  + M+  A
Sbjct: 146 YCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKA 205

Query: 130 VKLYELMMDGPYKPSLPDCSILLRTIAASDNPDLSLVYRVAKKFE--ASGYSLSKAIYDG 189
           +++ + M    ++P       LL  +    +     V   AK FE     + ++   +  
Sbjct: 206 IEVLDEMPKFGFEPDEYVFGCLLDALCKHGS-----VKDAAKLFEDMRMRFPVNLRYFTS 265

Query: 190 IHRSLTSRGKFDDAEDIVKSMRNAGYEPDNVTFSQLVFGLCKARRLKEAREVLDEMEAQG 249
           +       GK  +A+ ++  M  AG+EPD V ++ L+ G   A ++ +A ++L +M  +G
Sbjct: 266 LLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRG 325

Query: 250 CIPDIKTWTVLIQGHCNANKLDVALVCFAKMIEKNCDPDADLLDVLINGFLSQKKLDGAY 309
             P+   +TVLIQ  C  ++++ A+  F +M    C+ D      L++GF    K+D  Y
Sbjct: 326 FEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCY 385

Query: 310 QLLIELTNKAHVRPWQATYKHLIKNLLEVRKLEEAMALLRLMKKQNYPP---FPEPFVQY 369
            +L ++  K  + P + TY H++    +    EE + L+  M++  Y P        ++ 
Sbjct: 386 IVLDDMIKKG-LMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRL 445

Query: 370 ISKFGTVQDADDFLKVLSSKEY-PSVSAYLHIFNSFFNEGRYSEAKD 403
             K G V++A      +      P V  ++ + N   ++G   EA D
Sbjct: 446 ACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASD 483

BLAST of Cmc02g0058601 vs. TAIR 10
Match: AT5G18390.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 131.3 bits (329), Expect = 1.8e-30
Identity = 97/382 (25.39%), Postives = 170/382 (44.50%), Query Frame = 0

Query: 27  LGIALSDNFVIRVLKELRNSPLKALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKAF 86
           L + ++  FV RVL+    S   +L FFNW    P Y   ++ Y  +A+ LA +   ++ 
Sbjct: 71  LRLPVTSEFVFRVLRATSRSSNDSLRFFNWARSNPSYTPTSMEYEELAKSLASHKKYESM 130

Query: 87  WGVIEEMKNASLDIDIDTYIKISRQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLRT 146
           W ++++MK+ SLDI  +T   I  Q+ K+  +  AV+L+           +P      +T
Sbjct: 131 WKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFN---------GVP------KT 190

Query: 147 IAASDNPDLSLVYRVAKKFEASGYSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGYE 206
           +      D                     +Y+ +  +L     F  A  +++ M   G +
Sbjct: 191 LGCQQTVD---------------------VYNSLLHALCDVKMFHGAYALIRRMIRKGLK 250

Query: 207 PDNVTFSQLVFGLCKARRLKEAREVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALVC 266
           PD  T++ LV G C A ++KEA+E LDEM  +G  P  +   +LI+G  NA  L+ A   
Sbjct: 251 PDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEM 310

Query: 267 FAKMIEKNCDPDADLLDVLINGFLSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNLL 326
            +KM +    PD    ++LI       +++   ++      K  +     TYK LI  + 
Sbjct: 311 VSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTAC-KLGLCVDIDTYKTLIPAVS 370

Query: 327 EVRKLEEAMALLRLMKKQNYPPFPE---PFVQYISKFGTVQDADDFLKVLSSKEY-PSVS 386
           ++ K++EA  LL    +  + PFP    P ++ + + G   DA  F   +  K + P+  
Sbjct: 371 KIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRP 415

Query: 387 AYLHIFNSFFNEGRYSEAKDLL 405
            Y  +       G++ +A + L
Sbjct: 431 VYTMLITMCGRGGKFVDAANYL 415

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008464511.11.8e-23499.75PREDICTED: pentatricopeptide repeat-containing protein At3g48250, chloroplastic ... [more]
XP_008464511.15.2e-0396.30PREDICTED: pentatricopeptide repeat-containing protein At3g48250, chloroplastic ... [more]
KAA0057819.15.2e-0396.30pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa][more]
XP_004138087.15.2e-0396.30pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Cucumis sa... [more]
XP_023530746.11.3e-20886.95pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Cucurbita ... [more]
Match NameE-valueIdentityDescription
Q9STK53.4e-15162.44Pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Arabidop... [more]
Q9M8914.2e-6433.58Pentatricopeptide repeat-containing protein At3g02490, mitochondrial OS=Arabidop... [more]
Q8LPF13.9e-6231.95Pentatricopeptide repeat-containing protein At5g15980, mitochondrial OS=Arabidop... [more]
Q9FH873.0e-3024.08Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis th... [more]
Q94JX62.6e-2925.39Pentatricopeptide repeat-containing protein At5g18390, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A5D3BGX08.9e-23599.75Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A5D3BGX02.5e-0396.30Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A5A7UW702.5e-0396.30Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3CLM32.5e-0396.30pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Cucumis ... [more]
A0A0A0LNT72.5e-0396.30Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G003530 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G48250.12.4e-15262.44Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G02490.13.0e-6533.58Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G15980.12.8e-6331.95Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G65820.12.1e-3124.08Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G18390.11.8e-3025.39Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 317..345
e-value: 0.079
score: 13.3
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 242..279
e-value: 1.3E-7
score: 31.7
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 182..208
e-value: 4.9E-4
score: 18.1
coord: 317..348
e-value: 6.8E-4
score: 17.7
coord: 246..279
e-value: 2.2E-7
score: 28.6
coord: 210..244
e-value: 7.8E-9
score: 33.2
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 204..236
e-value: 3.1E-11
score: 42.8
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 243..277
score: 11.169622
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 173..207
score: 9.108898
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 208..242
score: 12.528824
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 314..348
score: 8.911594
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 28..166
e-value: 2.8E-14
score: 54.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 179..308
e-value: 2.5E-32
score: 114.5
coord: 309..429
e-value: 3.7E-6
score: 28.6
IPR044578Pentatricopeptide repeat-containing protein BIR6-likePANTHERPTHR47003OS01G0970900 PROTEINcoord: 24..424
NoneNo IPR availablePANTHERPTHR47003:SF2OS01G0970900 PROTEINcoord: 24..424

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc02g0058601.1Cmc02g0058601.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008380 RNA splicing
cellular_component GO:0005739 mitochondrion
molecular_function GO:0005515 protein binding