Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GATATTATCTCTAGAGAAGAAAATTTAATTTTGAAGGTTAAAGCAAATTTGGCGGGCGAACGAGTGTACAGCAACTCCTTTGCTCTGTGGGAGAATGGAGATCAAGGCGACTGATTCTGTTCGTGCGAGGTTGGAAAAACTTCGAATCGTTCGTGAAAATGAAATTCCAGTTCAGCAGCAAAAGATGGAGTCCTTCGCGGATTCATTTTGCAAATCAGTGGAATCGATCAGTGTAAGGTCCCGAGCAAATGCCCTAAGTCAAGGTGAGCTATCTATTTTCTTCATTTTATTTGGGAAAGAAATGGGTGTGAAACTTGTTACTGTGGCCACTTACGACACTGTAATCGATATTAGAATGGTTTGTGAAGTGACCATTAGGGTTTTGAAATGGGTAGCGATTAAGACTCAGAATGGATGTAATTCTAGGTAATTGAGTTGGAGTTGGTTCAGAAGTGGCGAAGTTTACTTTGAAATTTCTTGTTTCGTTTTTTTGTTTTGTTTTTGTTTATATATATATTTTTAATTCTCAGGGAAACTGGGGGAACTAAAAGCGAGGCTGAGGGTGGCGGAAGATGAACTGGTTAAAACTCTTGCAGGTATGAGCTATGATTATGCTACTTTCCTTCACCGCTGTATGAGTTAGAATATACTACTTCATTGAAGATTGAATCGACTTTAAGTGGCATTTAAGAGTTGAGTTATTTTTCCACTAAATTGTCGAGGATCTTTTAACGGTAGTGTTTTGGATTTGGAGCGAGTGTTGGGCGAAATGTTGGTGTGTGTGATGCTGGTATATTGTTTCTTACTTAAAGTTATTGCTCGTCGTATGGGCTTATTTCCTTTATACTTGCATATTTTTGTAGTGAAGACTCGTAAAGAGGCCAAACGCCTCACAATCATCGACTCCATTGCAACTTCAAAATCCAGAATAGAAGAACTCAGGAATACTTTACAAGACTGCAAAGCAAGGAGGGACGAATATGCTACAATTATATCTCAGCAATCCTTAGGTAATGTCTGTAAATCTTATTTTCTTTCAGACCCAATTTTCCTTTATGCAAATAGAAAACTGCACATGAACTGAAGGTAAGTTCATTGTTAACAAGTTGGATATGCATTGTTCAATCTTTATTTCCGCAATTCTTTTGCAAACTTCAACTTTAGAAGTTCCATGCGATAACTGATTACTTCTCTTTCTTTCCAATGCTATCAATAGTTTTATCTTCATCTGAACGCAAGGAAACCCAGGAGAGCGAGTGCAGAAATGAAATACAAGAGGCTATTTCTTGGTACAAAAGGGTTCTTGATTTTCATATTGAAGGAGGATATGGTATGATAATTCAAGTTTGTTTATGAAGAATCTCAACGGTTTTTGGGAAGCTTGAGATAAATTTGTTGACAACTTCTCTCGGCATTTCAGGGGTGAAATTCTCTTTCAAGAAAATAAATATAGACAATCCTGATGAAGAATATTCTTTTACGATCCGTCATGCAAATGATACTTATATGTGTAAGTTTTATCATATGTGCACTTAATATATGTTGATTTTTCTTGCTCATTATCTTCTGACAACCTGTATTTTTTTCTCTTGACTTTTTAGTGTTAGATTGTAACCCATCCTTGCCAGATATTAAGGAGTTGATACATGAATTAAATAAAACAAATGGTTTGTTCAAGCTCGTCAGGATCATGAGACGGAGATTCCAGGAGGCTGCAGCAGAAGGTGTGCCCTGAATTTTTAACTTTTTGCTTGAAAGGTATTTTTCCACTAAACGGTTGTTATATGTTTGCTATTTTCAACAGGATCTGGGGCTCCAGCATTGTCTCTGCATCAAGGTTCATCAATAATATCTACGTCAGCACCAGGCTTGTCATCATCAACTGAGAGAAGTGATTCTTCAACTGAAGAAATTAACATGGATGAAGTTGAGGAAACTAACAAACATTCTAAGAACATTTTACCCAGAAAGAAACCAGCTATCCACTCCAGTGGATCTGCTTTTTCTTTGCGTAGATCTCCTCGTTTTAAGGTATATTCAATTTTAATGTTTGATATCTGCTGCTTTTGATTTAGGATTCTTGAGTATATGATACTAAGAGAATACTATAAGTCTATAACTTCTATGTATAACAGGTTGATCTTTCTTTAAAGCAGATTTCAAATTGTTGTGCAAAAGAGAATTACTAATAAAATGCACCTCGTATGGCAGGTCAGGAAATAAGATTGGAGGCTGTTAATGATTGAACAAGTATTAGGTTGATGGGCTCAGCCTTTTGCTTCCAAATTGCTTTGCAACTAACGTTGATTATGCCATTATGGGTCCTGATCTCTACATTTGCCAGAATTTCTCTGACTACTCTGAAGGGTCCATATCATACAAGTGAAGTTGAAGAAGGCTTTATCACATGACCTGTTGTATGTCCATGTATCTGATTTGTTTTTATGTGTATTATTTTACACGAAGTTATGGTTTTCATGTAATGCATGGGGGTGATTATCCCAAATGTACCGAATGCCAGTACTTTGTATTAATCTGATCTATATTCTAGGTTTCACATCATCGTACTTAAATTAAGGTTTGTGCAGTTTTAAATTAATTAATTGTGAAAGCTTGAAGGTGAAAGTTCACTTCTCTGTGAAATTAAGTTAGTATATAACGATGTAGTTTACATTCTTTAATTAGTAGGTTCT
mRNA sequence
GATATTATCTCTAGAGAAGAAAATTTAATTTTGAAGGTTAAAGCAAATTTGGCGGGCGAACGAGTGTACAGCAACTCCTTTGCTCTGTGGGAGAATGGAGATCAAGGCGACTGATTCTGTTCGTGCGAGGTTGGAAAAACTTCGAATCGTTCGTGAAAATGAAATTCCAGTTCAGCAGCAAAAGATGGAGTCCTTCGCGGATTCATTTTGCAAATCAGTGGAATCGATCAGTGTAAGGTCCCGAGCAAATGCCCTAAGTCAAGGGAAACTGGGGGAACTAAAAGCGAGGCTGAGGGTGGCGGAAGATGAACTGGTTAAAACTCTTGCAGTGAAGACTCGTAAAGAGGCCAAACGCCTCACAATCATCGACTCCATTGCAACTTCAAAATCCAGAATAGAAGAACTCAGGAATACTTTACAAGACTGCAAAGCAAGGAGGGACGAATATGCTACAATTATATCTCAGCAATCCTTAGTTTTATCTTCATCTGAACGCAAGGAAACCCAGGAGAGCGAGTGCAGAAATGAAATACAAGAGGCTATTTCTTGGTACAAAAGGGTTCTTGATTTTCATATTGAAGGAGGATATGGGGTGAAATTCTCTTTCAAGAAAATAAATATAGACAATCCTGATGAAGAATATTCTTTTACGATCCGTCATGCAAATGATACTTATATGTTGTTAGATTGTAACCCATCCTTGCCAGATATTAAGGAGTTGATACATGAATTAAATAAAACAAATGGTTTGTTCAAGCTCGTCAGGATCATGAGACGGAGATTCCAGGAGGCTGCAGCAGAAGGATCTGGGGCTCCAGCATTGTCTCTGCATCAAGGTTCATCAATAATATCTACGTCAGCACCAGGCTTGTCATCATCAACTGAGAGAAGTGATTCTTCAACTGAAGAAATTAACATGGATGAAGTTGAGGAAACTAACAAACATTCTAAGAACATTTTACCCAGAAAGAAACCAGCTATCCACTCCAGTGGATCTGCTTTTTCTTTGCGTAGATCTCCTCGTTTTAAGGTCAGGAAATAAGATTGGAGGCTGTTAATGATTGAACAAGTATTAGGTTGATGGGCTCAGCCTTTTGCTTCCAAATTGCTTTGCAACTAACGTTGATTATGCCATTATGGGTCCTGATCTCTACATTTGCCAGAATTTCTCTGACTACTCTGAAGGGTCCATATCATACAAGTGAAGTTGAAGAAGGCTTTATCACATGACCTGTTGTATGTCCATGTATCTGATTTGTTTTTATGTGTATTATTTTACACGAAGTTATGGTTTTCATGTAATGCATGGGGGTGATTATCCCAAATGTACCGAATGCCAGTACTTTGTATTAATCTGATCTATATTCTAGGTTTCACATCATCGTACTTAAATTAAGGTTTGTGCAGTTTTAAATTAATTAATTGTGAAAGCTTGAAGGTGAAAGTTCACTTCTCTGTGAAATTAAGTTAGTATATAACGATGTAGTTTACATTCTTTAATTAGTAGGTTCT
Coding sequence (CDS)
ATGGAGATCAAGGCGACTGATTCTGTTCGTGCGAGGTTGGAAAAACTTCGAATCGTTCGTGAAAATGAAATTCCAGTTCAGCAGCAAAAGATGGAGTCCTTCGCGGATTCATTTTGCAAATCAGTGGAATCGATCAGTGTAAGGTCCCGAGCAAATGCCCTAAGTCAAGGGAAACTGGGGGAACTAAAAGCGAGGCTGAGGGTGGCGGAAGATGAACTGGTTAAAACTCTTGCAGTGAAGACTCGTAAAGAGGCCAAACGCCTCACAATCATCGACTCCATTGCAACTTCAAAATCCAGAATAGAAGAACTCAGGAATACTTTACAAGACTGCAAAGCAAGGAGGGACGAATATGCTACAATTATATCTCAGCAATCCTTAGTTTTATCTTCATCTGAACGCAAGGAAACCCAGGAGAGCGAGTGCAGAAATGAAATACAAGAGGCTATTTCTTGGTACAAAAGGGTTCTTGATTTTCATATTGAAGGAGGATATGGGGTGAAATTCTCTTTCAAGAAAATAAATATAGACAATCCTGATGAAGAATATTCTTTTACGATCCGTCATGCAAATGATACTTATATGTTGTTAGATTGTAACCCATCCTTGCCAGATATTAAGGAGTTGATACATGAATTAAATAAAACAAATGGTTTGTTCAAGCTCGTCAGGATCATGAGACGGAGATTCCAGGAGGCTGCAGCAGAAGGATCTGGGGCTCCAGCATTGTCTCTGCATCAAGGTTCATCAATAATATCTACGTCAGCACCAGGCTTGTCATCATCAACTGAGAGAAGTGATTCTTCAACTGAAGAAATTAACATGGATGAAGTTGAGGAAACTAACAAACATTCTAAGAACATTTTACCCAGAAAGAAACCAGCTATCCACTCCAGTGGATCTGCTTTTTCTTTGCGTAGATCTCCTCGTTTTAAGGTCAGGAAATAA
Protein sequence
MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQGKLGELKARLRVAEDELVKTLAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYATIISQQSLVLSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPDEEYSFTIRHANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGAPALSLHQGSSIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSGSAFSLRRSPRFKVRK
Homology
BLAST of Cmc02g0058361 vs. NCBI nr
Match:
XP_008464538.1 (PREDICTED: probable kinetochore protein SPC25 [Cucumis melo])
HSP 1 Score: 584.7 bits (1506), Expect = 4.7e-163
Identity = 314/315 (99.68%), Postives = 314/315 (99.68%), Query Frame = 0
Query: 1 MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQGKLG 60
MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQGKLG
Sbjct: 1 MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQGKLG 60
Query: 61 ELKARLRVAEDELVKTLAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYAT 120
ELKARLRVAEDELVK LAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYAT
Sbjct: 61 ELKARLRVAEDELVKALAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYAT 120
Query: 121 IISQQSLVLSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPD 180
IISQQSLVLSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPD
Sbjct: 121 IISQQSLVLSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPD 180
Query: 181 EEYSFTIRHANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGA 240
EEYSFTIRHANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGA
Sbjct: 181 EEYSFTIRHANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGA 240
Query: 241 PALSLHQGSSIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSG 300
PALSLHQGSSIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSG
Sbjct: 241 PALSLHQGSSIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSG 300
Query: 301 SAFSLRRSPRFKVRK 316
SAFSLRRSPRFKVRK
Sbjct: 301 SAFSLRRSPRFKVRK 315
BLAST of Cmc02g0058361 vs. NCBI nr
Match:
KAA0057836.1 (putative kinetochore protein SPC25 [Cucumis melo var. makuwa])
HSP 1 Score: 559.3 bits (1440), Expect = 2.1e-155
Identity = 313/364 (85.99%), Postives = 313/364 (85.99%), Query Frame = 0
Query: 1 MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQG--- 60
MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQG
Sbjct: 1 MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQGELS 60
Query: 61 ------------------------------------------------KLGELKARLRVA 120
KLGELKARLRVA
Sbjct: 61 IFFILFGKEMGVKLVTVATYDTVIDIRMVCEVTIRVLKWVAIKTQNGWKLGELKARLRVA 120
Query: 121 EDELVKTLAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYATIISQQSLVL 180
EDELVKTLAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYATIISQQSLVL
Sbjct: 121 EDELVKTLAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYATIISQQSLVL 180
Query: 181 SSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPDEEYSFTIRH 240
SSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPDEEYSFTIRH
Sbjct: 181 SSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPDEEYSFTIRH 240
Query: 241 ANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGAPALSLHQGS 300
ANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGAPALSLHQGS
Sbjct: 241 ANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGAPALSLHQGS 300
Query: 301 SIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSGSAFSLRRSP 314
SIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSGSAFSLRRSP
Sbjct: 301 SIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSGSAFSLRRSP 360
BLAST of Cmc02g0058361 vs. NCBI nr
Match:
TYJ98520.1 (putative kinetochore protein SPC25 [Cucumis melo var. makuwa])
HSP 1 Score: 557.4 bits (1435), Expect = 8.0e-155
Identity = 312/364 (85.71%), Postives = 312/364 (85.71%), Query Frame = 0
Query: 1 MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQG--- 60
MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQG
Sbjct: 1 MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQGELS 60
Query: 61 ------------------------------------------------KLGELKARLRVA 120
KLGELKARLRVA
Sbjct: 61 IFFILFGKEMGVKLVTVATYDTVIDIRMVCEVTIRVLKWVAIKTQNGWKLGELKARLRVA 120
Query: 121 EDELVKTLAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYATIISQQSLVL 180
EDELVK LAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYATIISQQSLVL
Sbjct: 121 EDELVKALAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYATIISQQSLVL 180
Query: 181 SSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPDEEYSFTIRH 240
SSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPDEEYSFTIRH
Sbjct: 181 SSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPDEEYSFTIRH 240
Query: 241 ANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGAPALSLHQGS 300
ANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGAPALSLHQGS
Sbjct: 241 ANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGAPALSLHQGS 300
Query: 301 SIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSGSAFSLRRSP 314
SIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSGSAFSLRRSP
Sbjct: 301 SIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSGSAFSLRRSP 360
BLAST of Cmc02g0058361 vs. NCBI nr
Match:
XP_004138099.1 (kinetochore protein SPC25 homolog [Cucumis sativus] >KGN63556.1 hypothetical protein Csa_014306 [Cucumis sativus])
HSP 1 Score: 553.1 bits (1424), Expect = 1.5e-153
Identity = 299/315 (94.92%), Postives = 304/315 (96.51%), Query Frame = 0
Query: 1 MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQGKLG 60
ME KA DSVRARLEKLRI+RENEIPVQQQKMESFADSF KSVESISVRSRANALSQGKLG
Sbjct: 1 MENKANDSVRARLEKLRILRENEIPVQQQKMESFADSFYKSVESISVRSRANALSQGKLG 60
Query: 61 ELKARLRVAEDELVKTLAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYAT 120
ELKARLR EDELVK LAVKTRKEAKRLTIIDSIATSKSR EELRNTLQDCKARRDEYAT
Sbjct: 61 ELKARLRETEDELVKALAVKTRKEAKRLTIIDSIATSKSRTEELRNTLQDCKARRDEYAT 120
Query: 121 IISQQSLVLSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPD 180
IISQQSLVLSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPD
Sbjct: 121 IISQQSLVLSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPD 180
Query: 181 EEYSFTIRHANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGA 240
EEYSFTIRHANDTYMLLDCNPSL DIKELIHELNKTNGLFKLVRIMRRRFQEAAAEG+GA
Sbjct: 181 EEYSFTIRHANDTYMLLDCNPSLSDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGAGA 240
Query: 241 PALSLHQGSSIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSG 300
PALSLHQGSS+ISTSAP LSSSTE S+SSTEEIN+DEVEETNKHSKNILPRK PAIHSSG
Sbjct: 241 PALSLHQGSSVISTSAPVLSSSTEGSESSTEEINIDEVEETNKHSKNILPRKNPAIHSSG 300
Query: 301 SAFSLRRSPRFKVRK 316
SAFSLRRSPRFKVRK
Sbjct: 301 SAFSLRRSPRFKVRK 315
BLAST of Cmc02g0058361 vs. NCBI nr
Match:
XP_038880541.1 (kinetochore protein SPC25 homolog [Benincasa hispida])
HSP 1 Score: 508.1 bits (1307), Expect = 5.6e-140
Identity = 280/316 (88.61%), Postives = 292/316 (92.41%), Query Frame = 0
Query: 1 MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQGKLG 60
ME KA DSVRARLEKLRIVRE EIP QQQKMESF +SF KSVESI+VRSRANALSQGKLG
Sbjct: 1 MENKAKDSVRARLEKLRIVREKEIPFQQQKMESFVNSFYKSVESINVRSRANALSQGKLG 60
Query: 61 ELKARLRVAEDELVKTLAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYAT 120
ELKARLR AEDELVK LAVKTRKEAKRLTIIDS+ATSKSRIEELRNTLQD KARRDEY+T
Sbjct: 61 ELKARLREAEDELVKALAVKTRKEAKRLTIIDSLATSKSRIEELRNTLQDSKARRDEYST 120
Query: 121 IISQQSLVLSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPD 180
IIS+QSL LSSSERKE QESECR EIQEAISWYKRVLDFHIEGG+GVKFSFKKIN+ NPD
Sbjct: 121 IISRQSLALSSSERKEPQESECRKEIQEAISWYKRVLDFHIEGGHGVKFSFKKINVVNPD 180
Query: 181 EEYSFTIRHANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGA 240
EEYSFTIRHANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAA+G A
Sbjct: 181 EEYSFTIRHANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAKGVEA 240
Query: 241 PALSLHQGSSIISTSAPGLSSSTERSDSSTEEIN-MDEVEETNKHSKNILPRKKPAIHSS 300
ALSLHQGS II SAPGLSSSTERS+SS+EEIN DE+EETNKH+K ILP KKPAI SS
Sbjct: 241 QALSLHQGSMIIPMSAPGLSSSTERSESSSEEINKKDELEETNKHTKKILPGKKPAIKSS 300
Query: 301 GSAFSLRRSPRFKVRK 316
GSAFSLRRSPRFKVRK
Sbjct: 301 GSAFSLRRSPRFKVRK 316
BLAST of Cmc02g0058361 vs. ExPASy Swiss-Prot
Match:
Q93VK9 (Kinetochore protein SPC25 homolog OS=Arabidopsis thaliana OX=3702 GN=SPC25 PE=1 SV=1)
HSP 1 Score: 198.4 bits (503), Expect = 1.2e-49
Identity = 131/314 (41.72%), Postives = 191/314 (60.83%), Query Frame = 0
Query: 3 IKATDSVRARLEKLRIVRENEIPVQQQKMESF-ADSFCKSVESISVRSRANALSQGKLGE 62
I D+ + + L ++ E +I Q+ K++SF A F +S+ S+ R++A A SQ +L
Sbjct: 7 IAGGDTTKETMASLGLICEKDIHEQRLKIDSFIASPFRRSMNSLVERAQATAQSQVELMN 66
Query: 63 LKARLRVAEDELVKTLAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYATI 122
LKA LR AEDELVK LAVKTRKEA+++ I DSI+ ++SRIE LR LQ K+++D+ I
Sbjct: 67 LKADLREAEDELVKVLAVKTRKEARQMGIRDSISATQSRIEVLRRNLQLQKSKKDDSVRI 126
Query: 123 ISQQSLVLSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPDE 182
ISQQ LS S+ + +E + +I EAISWY L FH+E G+GVKF+F I+ P
Sbjct: 127 ISQQLQALSKSKDNAGKVTEDKADIHEAISWYNHALGFHVEAGHGVKFTFTNIDAKRPTR 186
Query: 183 EYSFTIRHANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGAP 242
E+SFT+ + ND Y LLD + L I E++ ELNKTN LF+ VR+MR +F ++
Sbjct: 187 EFSFTVHYGNDIYTLLDSDLQLDYINEMVQELNKTNDLFRFVRLMREQFLKSTLSELPTH 246
Query: 243 ALSLHQGSSIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSGS 302
+ L Q +S IS SAP +S ST+ ++ ST E +V+ + + + + + S
Sbjct: 247 SGQLQQETSAISASAPAISFSTD-TNMSTPENKRSKVQVNRRQKRG----SESPLLAPVS 306
Query: 303 AFSLRRSPRFKVRK 316
+ RRS RFK +K
Sbjct: 307 TSATRRSSRFKGKK 315
BLAST of Cmc02g0058361 vs. ExPASy TrEMBL
Match:
A0A1S3CM71 (Kinetochore protein SPC25 OS=Cucumis melo OX=3656 GN=LOC103502389 PE=3 SV=1)
HSP 1 Score: 584.7 bits (1506), Expect = 2.3e-163
Identity = 314/315 (99.68%), Postives = 314/315 (99.68%), Query Frame = 0
Query: 1 MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQGKLG 60
MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQGKLG
Sbjct: 1 MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQGKLG 60
Query: 61 ELKARLRVAEDELVKTLAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYAT 120
ELKARLRVAEDELVK LAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYAT
Sbjct: 61 ELKARLRVAEDELVKALAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYAT 120
Query: 121 IISQQSLVLSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPD 180
IISQQSLVLSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPD
Sbjct: 121 IISQQSLVLSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPD 180
Query: 181 EEYSFTIRHANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGA 240
EEYSFTIRHANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGA
Sbjct: 181 EEYSFTIRHANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGA 240
Query: 241 PALSLHQGSSIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSG 300
PALSLHQGSSIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSG
Sbjct: 241 PALSLHQGSSIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSG 300
Query: 301 SAFSLRRSPRFKVRK 316
SAFSLRRSPRFKVRK
Sbjct: 301 SAFSLRRSPRFKVRK 315
BLAST of Cmc02g0058361 vs. ExPASy TrEMBL
Match:
A0A5A7UUK0 (Kinetochore protein SPC25 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G001230 PE=3 SV=1)
HSP 1 Score: 559.3 bits (1440), Expect = 1.0e-155
Identity = 313/364 (85.99%), Postives = 313/364 (85.99%), Query Frame = 0
Query: 1 MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQG--- 60
MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQG
Sbjct: 1 MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQGELS 60
Query: 61 ------------------------------------------------KLGELKARLRVA 120
KLGELKARLRVA
Sbjct: 61 IFFILFGKEMGVKLVTVATYDTVIDIRMVCEVTIRVLKWVAIKTQNGWKLGELKARLRVA 120
Query: 121 EDELVKTLAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYATIISQQSLVL 180
EDELVKTLAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYATIISQQSLVL
Sbjct: 121 EDELVKTLAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYATIISQQSLVL 180
Query: 181 SSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPDEEYSFTIRH 240
SSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPDEEYSFTIRH
Sbjct: 181 SSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPDEEYSFTIRH 240
Query: 241 ANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGAPALSLHQGS 300
ANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGAPALSLHQGS
Sbjct: 241 ANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGAPALSLHQGS 300
Query: 301 SIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSGSAFSLRRSP 314
SIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSGSAFSLRRSP
Sbjct: 301 SIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSGSAFSLRRSP 360
BLAST of Cmc02g0058361 vs. ExPASy TrEMBL
Match:
A0A5D3BFE9 (Kinetochore protein SPC25 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001250 PE=3 SV=1)
HSP 1 Score: 557.4 bits (1435), Expect = 3.9e-155
Identity = 312/364 (85.71%), Postives = 312/364 (85.71%), Query Frame = 0
Query: 1 MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQG--- 60
MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQG
Sbjct: 1 MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQGELS 60
Query: 61 ------------------------------------------------KLGELKARLRVA 120
KLGELKARLRVA
Sbjct: 61 IFFILFGKEMGVKLVTVATYDTVIDIRMVCEVTIRVLKWVAIKTQNGWKLGELKARLRVA 120
Query: 121 EDELVKTLAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYATIISQQSLVL 180
EDELVK LAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYATIISQQSLVL
Sbjct: 121 EDELVKALAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYATIISQQSLVL 180
Query: 181 SSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPDEEYSFTIRH 240
SSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPDEEYSFTIRH
Sbjct: 181 SSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPDEEYSFTIRH 240
Query: 241 ANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGAPALSLHQGS 300
ANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGAPALSLHQGS
Sbjct: 241 ANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGAPALSLHQGS 300
Query: 301 SIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSGSAFSLRRSP 314
SIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSGSAFSLRRSP
Sbjct: 301 SIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSGSAFSLRRSP 360
BLAST of Cmc02g0058361 vs. ExPASy TrEMBL
Match:
A0A0A0LU84 (Kinetochore protein SPC25 OS=Cucumis sativus OX=3659 GN=Csa_1G004230 PE=3 SV=1)
HSP 1 Score: 553.1 bits (1424), Expect = 7.3e-154
Identity = 299/315 (94.92%), Postives = 304/315 (96.51%), Query Frame = 0
Query: 1 MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQGKLG 60
ME KA DSVRARLEKLRI+RENEIPVQQQKMESFADSF KSVESISVRSRANALSQGKLG
Sbjct: 1 MENKANDSVRARLEKLRILRENEIPVQQQKMESFADSFYKSVESISVRSRANALSQGKLG 60
Query: 61 ELKARLRVAEDELVKTLAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYAT 120
ELKARLR EDELVK LAVKTRKEAKRLTIIDSIATSKSR EELRNTLQDCKARRDEYAT
Sbjct: 61 ELKARLRETEDELVKALAVKTRKEAKRLTIIDSIATSKSRTEELRNTLQDCKARRDEYAT 120
Query: 121 IISQQSLVLSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPD 180
IISQQSLVLSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPD
Sbjct: 121 IISQQSLVLSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPD 180
Query: 181 EEYSFTIRHANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGA 240
EEYSFTIRHANDTYMLLDCNPSL DIKELIHELNKTNGLFKLVRIMRRRFQEAAAEG+GA
Sbjct: 181 EEYSFTIRHANDTYMLLDCNPSLSDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGAGA 240
Query: 241 PALSLHQGSSIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSG 300
PALSLHQGSS+ISTSAP LSSSTE S+SSTEEIN+DEVEETNKHSKNILPRK PAIHSSG
Sbjct: 241 PALSLHQGSSVISTSAPVLSSSTEGSESSTEEINIDEVEETNKHSKNILPRKNPAIHSSG 300
Query: 301 SAFSLRRSPRFKVRK 316
SAFSLRRSPRFKVRK
Sbjct: 301 SAFSLRRSPRFKVRK 315
BLAST of Cmc02g0058361 vs. ExPASy TrEMBL
Match:
A0A6J1BYG5 (Kinetochore protein SPC25 OS=Momordica charantia OX=3673 GN=LOC111006883 PE=3 SV=1)
HSP 1 Score: 471.9 bits (1213), Expect = 2.1e-129
Identity = 257/316 (81.33%), Postives = 281/316 (88.92%), Query Frame = 0
Query: 1 MEIKATDSVRARLEKLRIVRENEIPVQQQKMESFADSFCKSVESISVRSRANALSQGKLG 60
ME K DS+R ++E LR+VRE EIPVQQQKMESFADSF KS+ESI+VRSR NALSQGKLG
Sbjct: 1 MENKVEDSIRVKMESLRMVREKEIPVQQQKMESFADSFRKSLESITVRSRENALSQGKLG 60
Query: 61 ELKARLRVAEDELVKTLAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYAT 120
ELKARLR AEDELVK LAVKTRKEAKRL I DS+A SKSRIEELRNTLQDCKA+RDEY+T
Sbjct: 61 ELKARLREAEDELVKALAVKTRKEAKRLAITDSLAASKSRIEELRNTLQDCKAKRDEYST 120
Query: 121 IISQQSLVLSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPD 180
IISQQSL LSSSE KETQES+CR+EIQEAISWY RVLDFHIEGG GVKFSFKKINI+ PD
Sbjct: 121 IISQQSLALSSSEHKETQESDCRSEIQEAISWYNRVLDFHIEGGRGVKFSFKKININIPD 180
Query: 181 EEYSFTIRHANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGA 240
+EYSFTIRHA+DTY LLDCNPSL DI++LIHELNKTNGLFK VR+MR+RFQE AAEG GA
Sbjct: 181 KEYSFTIRHASDTYTLLDCNPSLQDIQDLIHELNKTNGLFKFVRVMRQRFQEIAAEGVGA 240
Query: 241 PALSLHQGSSIISTSAPGLSSSTERSDSSTEEI-NMDEVEETNKHSKNILPRKKPAIHSS 300
ALSLHQ S+IIS SAPGLSSST+RS+SST+EI N +EETNKHSK IL KKPA+ S
Sbjct: 241 QALSLHQDSTIISVSAPGLSSSTDRSESSTQEIDNQVRLEETNKHSKKILSGKKPAVLSP 300
Query: 301 GSAFSLRRSPRFKVRK 316
GSAFSLRRSPRFKVRK
Sbjct: 301 GSAFSLRRSPRFKVRK 316
BLAST of Cmc02g0058361 vs. TAIR 10
Match:
AT3G48210.1 (CONTAINS InterPro DOMAIN/s: Kinetochore-Ndc80 complex, subunit Spc25 (InterPro:IPR013255); Has 194 Blast hits to 194 proteins in 72 species: Archae - 0; Bacteria - 4; Metazoa - 72; Fungi - 39; Plants - 62; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). )
HSP 1 Score: 198.4 bits (503), Expect = 8.8e-51
Identity = 131/314 (41.72%), Postives = 191/314 (60.83%), Query Frame = 0
Query: 3 IKATDSVRARLEKLRIVRENEIPVQQQKMESF-ADSFCKSVESISVRSRANALSQGKLGE 62
I D+ + + L ++ E +I Q+ K++SF A F +S+ S+ R++A A SQ +L
Sbjct: 7 IAGGDTTKETMASLGLICEKDIHEQRLKIDSFIASPFRRSMNSLVERAQATAQSQVELMN 66
Query: 63 LKARLRVAEDELVKTLAVKTRKEAKRLTIIDSIATSKSRIEELRNTLQDCKARRDEYATI 122
LKA LR AEDELVK LAVKTRKEA+++ I DSI+ ++SRIE LR LQ K+++D+ I
Sbjct: 67 LKADLREAEDELVKVLAVKTRKEARQMGIRDSISATQSRIEVLRRNLQLQKSKKDDSVRI 126
Query: 123 ISQQSLVLSSSERKETQESECRNEIQEAISWYKRVLDFHIEGGYGVKFSFKKINIDNPDE 182
ISQQ LS S+ + +E + +I EAISWY L FH+E G+GVKF+F I+ P
Sbjct: 127 ISQQLQALSKSKDNAGKVTEDKADIHEAISWYNHALGFHVEAGHGVKFTFTNIDAKRPTR 186
Query: 183 EYSFTIRHANDTYMLLDCNPSLPDIKELIHELNKTNGLFKLVRIMRRRFQEAAAEGSGAP 242
E+SFT+ + ND Y LLD + L I E++ ELNKTN LF+ VR+MR +F ++
Sbjct: 187 EFSFTVHYGNDIYTLLDSDLQLDYINEMVQELNKTNDLFRFVRLMREQFLKSTLSELPTH 246
Query: 243 ALSLHQGSSIISTSAPGLSSSTERSDSSTEEINMDEVEETNKHSKNILPRKKPAIHSSGS 302
+ L Q +S IS SAP +S ST+ ++ ST E +V+ + + + + + S
Sbjct: 247 SGQLQQETSAISASAPAISFSTD-TNMSTPENKRSKVQVNRRQKRG----SESPLLAPVS 306
Query: 303 AFSLRRSPRFKVRK 316
+ RRS RFK +K
Sbjct: 307 TSATRRSSRFKGKK 315
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_008464538.1 | 4.7e-163 | 99.68 | PREDICTED: probable kinetochore protein SPC25 [Cucumis melo] | [more] |
KAA0057836.1 | 2.1e-155 | 85.99 | putative kinetochore protein SPC25 [Cucumis melo var. makuwa] | [more] |
TYJ98520.1 | 8.0e-155 | 85.71 | putative kinetochore protein SPC25 [Cucumis melo var. makuwa] | [more] |
XP_004138099.1 | 1.5e-153 | 94.92 | kinetochore protein SPC25 homolog [Cucumis sativus] >KGN63556.1 hypothetical pro... | [more] |
XP_038880541.1 | 5.6e-140 | 88.61 | kinetochore protein SPC25 homolog [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
Q93VK9 | 1.2e-49 | 41.72 | Kinetochore protein SPC25 homolog OS=Arabidopsis thaliana OX=3702 GN=SPC25 PE=1 ... | [more] |
Match Name | E-value | Identity | Description | |
A0A1S3CM71 | 2.3e-163 | 99.68 | Kinetochore protein SPC25 OS=Cucumis melo OX=3656 GN=LOC103502389 PE=3 SV=1 | [more] |
A0A5A7UUK0 | 1.0e-155 | 85.99 | Kinetochore protein SPC25 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo... | [more] |
A0A5D3BFE9 | 3.9e-155 | 85.71 | Kinetochore protein SPC25 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... | [more] |
A0A0A0LU84 | 7.3e-154 | 94.92 | Kinetochore protein SPC25 OS=Cucumis sativus OX=3659 GN=Csa_1G004230 PE=3 SV=1 | [more] |
A0A6J1BYG5 | 2.1e-129 | 81.33 | Kinetochore protein SPC25 OS=Momordica charantia OX=3673 GN=LOC111006883 PE=3 SV... | [more] |
Match Name | E-value | Identity | Description | |
AT3G48210.1 | 8.8e-51 | 41.72 | CONTAINS InterPro DOMAIN/s: Kinetochore-Ndc80 complex, subunit Spc25 (InterPro:I... | [more] |