Cmc02g0058061 (gene) Melon (Charmono) v1.1

Overview
NameCmc02g0058061
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTy3/gypsy retrotransposon protein
LocationCMiso1.1chr02: 23747315 .. 23747773 (+)
RNA-Seq ExpressionCmc02g0058061
SyntenyCmc02g0058061
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTGGCTTCGGGAATTATAAGACCTAGCACCAGCCCGTTTTCCAGTCCGGTTATCTTGGTAAAAAAGAAGGATGGGGGATGGCGGTTTTGCGTCGACTATCGCGCTTTAAACCGAGCAACTGTACCGGATAAGTTCCCTATTCCCATGATCGATGAGCTGTTGGATGAGCTAAGTGGAGCGAGTATCTTCTCTAAAATAGACTTGAAATCCGGGTACCATCAAATCTGGATGCGGGATGAAGATGTAAGCAAGACAACTTTCAGAACACACGAGGGTCATTACGAGTTCCTAGTCATGCCCTTCGGCCTCACCAATGTACCCGTGACATTTCAAGTACTGATGAATAAGGTTTTTCGACCTTATTTACGTAAATTCTTGCTGGTATTTTTTGACGACATTCTGGTGTACAGTGTCACAATCGTAACTTCTCGACACGATTGTGCGGCACTTGTTTAG

mRNA sequence

ATGCTGGCTTCGGGAATTATAAGACCTAGCACCAGCCCGTTTTCCAGTCCGGTTATCTTGGTAAAAAAGAAGGATGGGGGATGGCGGTTTTGCGTCGACTATCGCGCTTTAAACCGAGCAACTGTACCGGATAAGTTCCCTATTCCCATGATCGATGAGCTGTTGGATGAGCTAAGTGGAGCGAGTATCTTCTCTAAAATAGACTTGAAATCCGGGTACCATCAAATCTGGATGCGGGATGAAGATGTAAGCAAGACAACTTTCAGAACACACGAGGGTCATTACGAGTTCCTAGTCATGCCCTTCGGCCTCACCAATGTACCCGTGACATTTCAAGTACTGATGAATAAGGTTTTTCGACCTTATTTACGTAAATTCTTGCTGGTATTTTTTGACGACATTCTGGTGTACAGTGTCACAATCGTAACTTCTCGACACGATTGTGCGGCACTTGTTTAG

Coding sequence (CDS)

ATGCTGGCTTCGGGAATTATAAGACCTAGCACCAGCCCGTTTTCCAGTCCGGTTATCTTGGTAAAAAAGAAGGATGGGGGATGGCGGTTTTGCGTCGACTATCGCGCTTTAAACCGAGCAACTGTACCGGATAAGTTCCCTATTCCCATGATCGATGAGCTGTTGGATGAGCTAAGTGGAGCGAGTATCTTCTCTAAAATAGACTTGAAATCCGGGTACCATCAAATCTGGATGCGGGATGAAGATGTAAGCAAGACAACTTTCAGAACACACGAGGGTCATTACGAGTTCCTAGTCATGCCCTTCGGCCTCACCAATGTACCCGTGACATTTCAAGTACTGATGAATAAGGTTTTTCGACCTTATTTACGTAAATTCTTGCTGGTATTTTTTGACGACATTCTGGTGTACAGTGTCACAATCGTAACTTCTCGACACGATTGTGCGGCACTTGTTTAG

Protein sequence

MLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSGASIFSKIDLKSGYHQIWMRDEDVSKTTFRTHEGHYEFLVMPFGLTNVPVTFQVLMNKVFRPYLRKFLLVFFDDILVYSVTIVTSRHDCAALV
Homology
BLAST of Cmc02g0058061 vs. NCBI nr
Match: KAA0057859.1 (pleiotropic drug resistance protein 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 312.8 bits (800), Expect = 1.7e-81
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0

Query: 1   MLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSG 60
           MLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSG
Sbjct: 155 MLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSG 214

Query: 61  ASIFSKIDLKSGYHQIWMRDEDVSKTTFRTHEGHYEFLVMPFGLTNVPVTFQVLMNKVFR 120
           ASIFSKIDLKSGYHQIWMRDEDVSKTTFRTHEGHYEFLVMPFGLTNVPVTFQVLMNKVFR
Sbjct: 215 ASIFSKIDLKSGYHQIWMRDEDVSKTTFRTHEGHYEFLVMPFGLTNVPVTFQVLMNKVFR 274

Query: 121 PYLRKFLLVFFDDILVYSVTIVTSRHDCAALV 153
           PYLRKFLLVFFDDILVYSVTIVTSRHDCAALV
Sbjct: 275 PYLRKFLLVFFDDILVYSVTIVTSRHDCAALV 306

BLAST of Cmc02g0058061 vs. NCBI nr
Match: TYJ98541.1 (pleiotropic drug resistance protein 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 312.8 bits (800), Expect = 1.7e-81
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0

Query: 1   MLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSG 60
           MLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSG
Sbjct: 196 MLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSG 255

Query: 61  ASIFSKIDLKSGYHQIWMRDEDVSKTTFRTHEGHYEFLVMPFGLTNVPVTFQVLMNKVFR 120
           ASIFSKIDLKSGYHQIWMRDEDVSKTTFRTHEGHYEFLVMPFGLTNVPVTFQVLMNKVFR
Sbjct: 256 ASIFSKIDLKSGYHQIWMRDEDVSKTTFRTHEGHYEFLVMPFGLTNVPVTFQVLMNKVFR 315

Query: 121 PYLRKFLLVFFDDILVYSVTIVTSRHDCAALV 153
           PYLRKFLLVFFDDILVYSVTIVTSRHDCAALV
Sbjct: 316 PYLRKFLLVFFDDILVYSVTIVTSRHDCAALV 347

BLAST of Cmc02g0058061 vs. NCBI nr
Match: TYK21209.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 270.4 bits (690), Expect = 9.5e-69
Identity = 131/143 (91.61%), Postives = 135/143 (94.41%), Query Frame = 0

Query: 1   MLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSG 60
           MLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSG
Sbjct: 626 MLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSG 685

Query: 61  ASIFSKIDLKSGYHQIWMRDEDVSKTTFRTHEGHYEFLVMPFGLTNVPVTFQVLMNKVFR 120
           ASIFSKIDLKSGYHQI +RDED+SKT FRTHEGHYEFLVMPFGLTN P TFQ LMN+VFR
Sbjct: 686 ASIFSKIDLKSGYHQIRVRDEDISKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNQVFR 745

Query: 121 PYLRKFLLVFFDDILVYSVTIVT 144
           PYLRKFLLVFFDDILVYS  + T
Sbjct: 746 PYLRKFLLVFFDDILVYSRDVET 768

BLAST of Cmc02g0058061 vs. NCBI nr
Match: TYK10423.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 270.4 bits (690), Expect = 9.5e-69
Identity = 131/143 (91.61%), Postives = 135/143 (94.41%), Query Frame = 0

Query: 1   MLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSG 60
           MLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSG
Sbjct: 626 MLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSG 685

Query: 61  ASIFSKIDLKSGYHQIWMRDEDVSKTTFRTHEGHYEFLVMPFGLTNVPVTFQVLMNKVFR 120
           ASIFSKIDLKSGYHQI +RDED+SKT FRTHEGHYEFLVMPFGLTN P TFQ LMN+VFR
Sbjct: 686 ASIFSKIDLKSGYHQIRVRDEDISKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNQVFR 745

Query: 121 PYLRKFLLVFFDDILVYSVTIVT 144
           PYLRKFLLVFFDDILVYS  + T
Sbjct: 746 PYLRKFLLVFFDDILVYSRDVET 768

BLAST of Cmc02g0058061 vs. NCBI nr
Match: TYK23724.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 270.4 bits (690), Expect = 9.5e-69
Identity = 131/143 (91.61%), Postives = 135/143 (94.41%), Query Frame = 0

Query: 1   MLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSG 60
           MLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSG
Sbjct: 626 MLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSG 685

Query: 61  ASIFSKIDLKSGYHQIWMRDEDVSKTTFRTHEGHYEFLVMPFGLTNVPVTFQVLMNKVFR 120
           ASIFSKIDLKSGYHQI +RDED+SKT FRTHEGHYEFLVMPFGLTN P TFQ LMN+VFR
Sbjct: 686 ASIFSKIDLKSGYHQIRVRDEDISKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNQVFR 745

Query: 121 PYLRKFLLVFFDDILVYSVTIVT 144
           PYLRKFLLVFFDDILVYS  + T
Sbjct: 746 PYLRKFLLVFFDDILVYSRDVET 768

BLAST of Cmc02g0058061 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.4e-35
Identity = 71/146 (48.63%), Postives = 95/146 (65.07%), Query Frame = 0

Query: 1   MLASGIIRPSTSPFSSPVILVKKKDGG-----WRFCVDYRALNRATVPDKFPIPMIDELL 60
           ML  G+IR S SP++SP  +V KK        +R  +DYR LN  T+PD++PIP +DE+L
Sbjct: 229 MLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVVIDYRKLNEITIPDRYPIPNMDEIL 288

Query: 61  DELSGASIFSKIDLKSGYHQIWMRDEDVSKTTFRTHEGHYEFLVMPFGLTNVPVTFQVLM 120
            +L     F+ IDL  G+HQI M +E +SKT F T  GHYE+L MPFGL N P TFQ  M
Sbjct: 289 GKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKSGHYEYLRMPFGLRNAPATFQRCM 348

Query: 121 NKVFRPYLRKFLLVFFDDILVYSVTI 142
           N + RP L K  LV+ DDI+++S ++
Sbjct: 349 NNILRPLLNKHCLVYLDDIIIFSTSL 374

BLAST of Cmc02g0058061 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 9.3e-35
Identity = 74/146 (50.68%), Postives = 94/146 (64.38%), Query Frame = 0

Query: 1   MLASGIIRPSTSPFSSPVILVKKKDGG-----WRFCVDYRALNRATVPDKFPIPMIDELL 60
           ML  GIIR S SP++SP+ +V KK        +R  +DYR LN  TV D+ PIP +DE+L
Sbjct: 230 MLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRHPIPNMDEIL 289

Query: 61  DELSGASIFSKIDLKSGYHQIWMRDEDVSKTTFRTHEGHYEFLVMPFGLTNVPVTFQVLM 120
            +L   + F+ IDL  G+HQI M  E VSKT F T  GHYE+L MPFGL N P TFQ  M
Sbjct: 290 GKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKNAPATFQRCM 349

Query: 121 NKVFRPYLRKFLLVFFDDILVYSVTI 142
           N + RP L K  LV+ DDI+V+S ++
Sbjct: 350 NDILRPLLNKHCLVYLDDIIVFSTSL 375

BLAST of Cmc02g0058061 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 146.7 bits (369), Expect = 2.1e-34
Identity = 74/138 (53.62%), Postives = 91/138 (65.94%), Query Frame = 0

Query: 1   MLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSG 60
           +L +  I PS SP SSPV+LV KKDG +R CVDYR LN+AT+ D FP+P ID LL  +  
Sbjct: 619 LLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGN 678

Query: 61  ASIFSKIDLKSGYHQIWMRDEDVSKTTFRTHEGHYEFLVMPFGLTNVPVTFQVLMNKVFR 120
           A IF+ +DL SGYHQI M  +D  KT F T  G YE+ VMPFGL N P TF   M   FR
Sbjct: 679 AQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFR 738

Query: 121 PYLRKFLLVFFDDILVYS 139
               +F+ V+ DDIL++S
Sbjct: 739 DL--RFVNVYLDDILIFS 754

BLAST of Cmc02g0058061 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 146.7 bits (369), Expect = 2.1e-34
Identity = 74/138 (53.62%), Postives = 91/138 (65.94%), Query Frame = 0

Query: 1   MLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSG 60
           +L +  I PS SP SSPV+LV KKDG +R CVDYR LN+AT+ D FP+P ID LL  +  
Sbjct: 645 LLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGN 704

Query: 61  ASIFSKIDLKSGYHQIWMRDEDVSKTTFRTHEGHYEFLVMPFGLTNVPVTFQVLMNKVFR 120
           A IF+ +DL SGYHQI M  +D  KT F T  G YE+ VMPFGL N P TF   M   FR
Sbjct: 705 AQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFR 764

Query: 121 PYLRKFLLVFFDDILVYS 139
               +F+ V+ DDIL++S
Sbjct: 765 DL--RFVNVYLDDILIFS 780

BLAST of Cmc02g0058061 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 6.2e-31
Identity = 64/143 (44.76%), Postives = 92/143 (64.34%), Query Frame = 0

Query: 1   MLASGIIRPSTSPFSSPVILVKKK-----DGGWRFCVDYRALNRATVPDKFPIPMIDELL 60
           +L  GIIRPS SP++SP+ +V KK     +  +R  VD++ LN  T+PD +PIP I+  L
Sbjct: 146 LLQDGIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVTIPDTYPIPDINATL 205

Query: 61  DELSGASIFSKIDLKSGYHQIWMRDEDVSKTTFRTHEGHYEFLVMPFGLTNVPVTFQVLM 120
             L  A  F+ +DL SG+HQI M++ D+ KT F T  G YEFL +PFGL N P  FQ ++
Sbjct: 206 ASLGNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNAPAIFQRMI 265

Query: 121 NKVFRPYLRKFLLVFFDDILVYS 139
           + + R ++ K   V+ DDI+V+S
Sbjct: 266 DDILREHIGKVCYVYIDDIIVFS 288

BLAST of Cmc02g0058061 vs. ExPASy TrEMBL
Match: A0A5A7UWA7 (Pleiotropic drug resistance protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G001530 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 8.1e-82
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0

Query: 1   MLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSG 60
           MLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSG
Sbjct: 155 MLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSG 214

Query: 61  ASIFSKIDLKSGYHQIWMRDEDVSKTTFRTHEGHYEFLVMPFGLTNVPVTFQVLMNKVFR 120
           ASIFSKIDLKSGYHQIWMRDEDVSKTTFRTHEGHYEFLVMPFGLTNVPVTFQVLMNKVFR
Sbjct: 215 ASIFSKIDLKSGYHQIWMRDEDVSKTTFRTHEGHYEFLVMPFGLTNVPVTFQVLMNKVFR 274

Query: 121 PYLRKFLLVFFDDILVYSVTIVTSRHDCAALV 153
           PYLRKFLLVFFDDILVYSVTIVTSRHDCAALV
Sbjct: 275 PYLRKFLLVFFDDILVYSVTIVTSRHDCAALV 306

BLAST of Cmc02g0058061 vs. ExPASy TrEMBL
Match: A0A5D3BIM8 (Pleiotropic drug resistance protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001530 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 8.1e-82
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0

Query: 1   MLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSG 60
           MLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSG
Sbjct: 196 MLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSG 255

Query: 61  ASIFSKIDLKSGYHQIWMRDEDVSKTTFRTHEGHYEFLVMPFGLTNVPVTFQVLMNKVFR 120
           ASIFSKIDLKSGYHQIWMRDEDVSKTTFRTHEGHYEFLVMPFGLTNVPVTFQVLMNKVFR
Sbjct: 256 ASIFSKIDLKSGYHQIWMRDEDVSKTTFRTHEGHYEFLVMPFGLTNVPVTFQVLMNKVFR 315

Query: 121 PYLRKFLLVFFDDILVYSVTIVTSRHDCAALV 153
           PYLRKFLLVFFDDILVYSVTIVTSRHDCAALV
Sbjct: 316 PYLRKFLLVFFDDILVYSVTIVTSRHDCAALV 347

BLAST of Cmc02g0058061 vs. ExPASy TrEMBL
Match: A0A5D3BD16 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold453G001350 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 4.6e-69
Identity = 131/143 (91.61%), Postives = 135/143 (94.41%), Query Frame = 0

Query: 1   MLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSG 60
           MLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSG
Sbjct: 626 MLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSG 685

Query: 61  ASIFSKIDLKSGYHQIWMRDEDVSKTTFRTHEGHYEFLVMPFGLTNVPVTFQVLMNKVFR 120
           ASIFSKIDLKSGYHQI +RDED+SKT FRTHEGHYEFLVMPFGLTN P TFQ LMN+VFR
Sbjct: 686 ASIFSKIDLKSGYHQIRVRDEDISKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNQVFR 745

Query: 121 PYLRKFLLVFFDDILVYSVTIVT 144
           PYLRKFLLVFFDDILVYS  + T
Sbjct: 746 PYLRKFLLVFFDDILVYSRDVET 768

BLAST of Cmc02g0058061 vs. ExPASy TrEMBL
Match: A0A5D3CEX8 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G00690 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 4.6e-69
Identity = 131/143 (91.61%), Postives = 135/143 (94.41%), Query Frame = 0

Query: 1   MLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSG 60
           MLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSG
Sbjct: 626 MLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSG 685

Query: 61  ASIFSKIDLKSGYHQIWMRDEDVSKTTFRTHEGHYEFLVMPFGLTNVPVTFQVLMNKVFR 120
           ASIFSKIDLKSGYHQI +RDED+SKT FRTHEGHYEFLVMPFGLTN P TFQ LMN+VFR
Sbjct: 686 ASIFSKIDLKSGYHQIRVRDEDISKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNQVFR 745

Query: 121 PYLRKFLLVFFDDILVYSVTIVT 144
           PYLRKFLLVFFDDILVYS  + T
Sbjct: 746 PYLRKFLLVFFDDILVYSRDVET 768

BLAST of Cmc02g0058061 vs. ExPASy TrEMBL
Match: A0A5D3DRT3 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00710 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 4.6e-69
Identity = 131/143 (91.61%), Postives = 135/143 (94.41%), Query Frame = 0

Query: 1   MLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSG 60
           MLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSG
Sbjct: 626 MLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSG 685

Query: 61  ASIFSKIDLKSGYHQIWMRDEDVSKTTFRTHEGHYEFLVMPFGLTNVPVTFQVLMNKVFR 120
           ASIFSKIDLKSGYHQI +RDED+SKT FRTHEGHYEFLVMPFGLTN P TFQ LMN+VFR
Sbjct: 686 ASIFSKIDLKSGYHQIRVRDEDISKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNQVFR 745

Query: 121 PYLRKFLLVFFDDILVYSVTIVT 144
           PYLRKFLLVFFDDILVYS  + T
Sbjct: 746 PYLRKFLLVFFDDILVYSRDVET 768

BLAST of Cmc02g0058061 vs. TAIR 10
Match: ATMG00850.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 47.4 bits (111), Expect = 1.2e-05
Identity = 20/28 (71.43%), Postives = 25/28 (89.29%), Query Frame = 0

Query: 1  MLASGIIRPSTSPFSSPVILVKKKDGGW 29
          ML + II+PS SP+SSPV+LV+KKDGGW
Sbjct: 52 MLEARIIQPSISPYSSPVLLVQKKDGGW 79

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0057859.11.7e-81100.00pleiotropic drug resistance protein 1-like [Cucumis melo var. makuwa][more]
TYJ98541.11.7e-81100.00pleiotropic drug resistance protein 1-like [Cucumis melo var. makuwa][more]
TYK21209.19.5e-6991.61Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
TYK10423.19.5e-6991.61Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
TYK23724.19.5e-6991.61Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
P208251.4e-3548.63Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste... [more]
P043239.3e-3550.68Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast... [more]
Q993152.1e-3453.62Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... [more]
Q7LHG52.1e-3453.62Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... [more]
Q8I7P96.2e-3144.76Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast... [more]
Match NameE-valueIdentityDescription
A0A5A7UWA78.1e-82100.00Pleiotropic drug resistance protein 1-like OS=Cucumis melo var. makuwa OX=119469... [more]
A0A5D3BIM88.1e-82100.00Pleiotropic drug resistance protein 1-like OS=Cucumis melo var. makuwa OX=119469... [more]
A0A5D3BD164.6e-6991.61Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5D3CEX84.6e-6991.61Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5D3DRT34.6e-6991.61Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
Match NameE-valueIdentityDescription
ATMG00850.11.2e-0571.43DNA/RNA polymerases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 46..141
e-value: 3.8E-61
score: 208.1
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 21..140
e-value: 5.7E-23
score: 81.6
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 2..152
score: 12.052962
NoneNo IPR availableGENE3D3.10.10.10HIV Type 1 Reverse Transcriptase, subunit A, domain 1coord: 1..106
e-value: 3.8E-61
score: 208.1
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 1..132
NoneNo IPR availablePANTHERPTHR24559:SF319SUBFAMILY NOT NAMEDcoord: 1..132
NoneNo IPR availableCDDcd01647RT_LTRcoord: 5..141
e-value: 7.74835E-74
score: 216.693
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 1..141

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc02g0058061.1Cmc02g0058061.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0098869 cellular oxidant detoxification
biological_process GO:0015074 DNA integration
biological_process GO:0006278 RNA-dependent DNA biosynthetic process
cellular_component GO:0016020 membrane
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004601 peroxidase activity
molecular_function GO:0003964 RNA-directed DNA polymerase activity