Cmc02g0058061 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTGGCTTCGGGAATTATAAGACCTAGCACCAGCCCGTTTTCCAGTCCGGTTATCTTGGTAAAAAAGAAGGATGGGGGATGGCGGTTTTGCGTCGACTATCGCGCTTTAAACCGAGCAACTGTACCGGATAAGTTCCCTATTCCCATGATCGATGAGCTGTTGGATGAGCTAAGTGGAGCGAGTATCTTCTCTAAAATAGACTTGAAATCCGGGTACCATCAAATCTGGATGCGGGATGAAGATGTAAGCAAGACAACTTTCAGAACACACGAGGGTCATTACGAGTTCCTAGTCATGCCCTTCGGCCTCACCAATGTACCCGTGACATTTCAAGTACTGATGAATAAGGTTTTTCGACCTTATTTACGTAAATTCTTGCTGGTATTTTTTGACGACATTCTGGTGTACAGTGTCACAATCGTAACTTCTCGACACGATTGTGCGGCACTTGTTTAG ATGCTGGCTTCGGGAATTATAAGACCTAGCACCAGCCCGTTTTCCAGTCCGGTTATCTTGGTAAAAAAGAAGGATGGGGGATGGCGGTTTTGCGTCGACTATCGCGCTTTAAACCGAGCAACTGTACCGGATAAGTTCCCTATTCCCATGATCGATGAGCTGTTGGATGAGCTAAGTGGAGCGAGTATCTTCTCTAAAATAGACTTGAAATCCGGGTACCATCAAATCTGGATGCGGGATGAAGATGTAAGCAAGACAACTTTCAGAACACACGAGGGTCATTACGAGTTCCTAGTCATGCCCTTCGGCCTCACCAATGTACCCGTGACATTTCAAGTACTGATGAATAAGGTTTTTCGACCTTATTTACGTAAATTCTTGCTGGTATTTTTTGACGACATTCTGGTGTACAGTGTCACAATCGTAACTTCTCGACACGATTGTGCGGCACTTGTTTAG ATGCTGGCTTCGGGAATTATAAGACCTAGCACCAGCCCGTTTTCCAGTCCGGTTATCTTGGTAAAAAAGAAGGATGGGGGATGGCGGTTTTGCGTCGACTATCGCGCTTTAAACCGAGCAACTGTACCGGATAAGTTCCCTATTCCCATGATCGATGAGCTGTTGGATGAGCTAAGTGGAGCGAGTATCTTCTCTAAAATAGACTTGAAATCCGGGTACCATCAAATCTGGATGCGGGATGAAGATGTAAGCAAGACAACTTTCAGAACACACGAGGGTCATTACGAGTTCCTAGTCATGCCCTTCGGCCTCACCAATGTACCCGTGACATTTCAAGTACTGATGAATAAGGTTTTTCGACCTTATTTACGTAAATTCTTGCTGGTATTTTTTGACGACATTCTGGTGTACAGTGTCACAATCGTAACTTCTCGACACGATTGTGCGGCACTTGTTTAG MLASGIIRPSTSPFSSPVILVKKKDGGWRFCVDYRALNRATVPDKFPIPMIDELLDELSGASIFSKIDLKSGYHQIWMRDEDVSKTTFRTHEGHYEFLVMPFGLTNVPVTFQVLMNKVFRPYLRKFLLVFFDDILVYSVTIVTSRHDCAALV Homology
BLAST of Cmc02g0058061 vs. NCBI nr
Match: KAA0057859.1 (pleiotropic drug resistance protein 1-like [Cucumis melo var. makuwa]) HSP 1 Score: 312.8 bits (800), Expect = 1.7e-81 Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
BLAST of Cmc02g0058061 vs. NCBI nr
Match: TYJ98541.1 (pleiotropic drug resistance protein 1-like [Cucumis melo var. makuwa]) HSP 1 Score: 312.8 bits (800), Expect = 1.7e-81 Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
BLAST of Cmc02g0058061 vs. NCBI nr
Match: TYK21209.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 270.4 bits (690), Expect = 9.5e-69 Identity = 131/143 (91.61%), Postives = 135/143 (94.41%), Query Frame = 0
BLAST of Cmc02g0058061 vs. NCBI nr
Match: TYK10423.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 270.4 bits (690), Expect = 9.5e-69 Identity = 131/143 (91.61%), Postives = 135/143 (94.41%), Query Frame = 0
BLAST of Cmc02g0058061 vs. NCBI nr
Match: TYK23724.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 270.4 bits (690), Expect = 9.5e-69 Identity = 131/143 (91.61%), Postives = 135/143 (94.41%), Query Frame = 0
BLAST of Cmc02g0058061 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 1.4e-35 Identity = 71/146 (48.63%), Postives = 95/146 (65.07%), Query Frame = 0
BLAST of Cmc02g0058061 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 9.3e-35 Identity = 74/146 (50.68%), Postives = 94/146 (64.38%), Query Frame = 0
BLAST of Cmc02g0058061 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3) HSP 1 Score: 146.7 bits (369), Expect = 2.1e-34 Identity = 74/138 (53.62%), Postives = 91/138 (65.94%), Query Frame = 0
BLAST of Cmc02g0058061 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2) HSP 1 Score: 146.7 bits (369), Expect = 2.1e-34 Identity = 74/138 (53.62%), Postives = 91/138 (65.94%), Query Frame = 0
BLAST of Cmc02g0058061 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 6.2e-31 Identity = 64/143 (44.76%), Postives = 92/143 (64.34%), Query Frame = 0
BLAST of Cmc02g0058061 vs. ExPASy TrEMBL
Match: A0A5A7UWA7 (Pleiotropic drug resistance protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G001530 PE=4 SV=1) HSP 1 Score: 312.8 bits (800), Expect = 8.1e-82 Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
BLAST of Cmc02g0058061 vs. ExPASy TrEMBL
Match: A0A5D3BIM8 (Pleiotropic drug resistance protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001530 PE=4 SV=1) HSP 1 Score: 312.8 bits (800), Expect = 8.1e-82 Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
BLAST of Cmc02g0058061 vs. ExPASy TrEMBL
Match: A0A5D3BD16 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold453G001350 PE=4 SV=1) HSP 1 Score: 270.4 bits (690), Expect = 4.6e-69 Identity = 131/143 (91.61%), Postives = 135/143 (94.41%), Query Frame = 0
BLAST of Cmc02g0058061 vs. ExPASy TrEMBL
Match: A0A5D3CEX8 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G00690 PE=4 SV=1) HSP 1 Score: 270.4 bits (690), Expect = 4.6e-69 Identity = 131/143 (91.61%), Postives = 135/143 (94.41%), Query Frame = 0
BLAST of Cmc02g0058061 vs. ExPASy TrEMBL
Match: A0A5D3DRT3 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00710 PE=4 SV=1) HSP 1 Score: 270.4 bits (690), Expect = 4.6e-69 Identity = 131/143 (91.61%), Postives = 135/143 (94.41%), Query Frame = 0
BLAST of Cmc02g0058061 vs. TAIR 10
Match: ATMG00850.1 (DNA/RNA polymerases superfamily protein ) HSP 1 Score: 47.4 bits (111), Expect = 1.2e-05 Identity = 20/28 (71.43%), Postives = 25/28 (89.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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