Cmc02g0057781 (gene) Melon (Charmono) v1.1

Overview
NameCmc02g0057781
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr02: 23538533 .. 23540810 (+)
RNA-Seq ExpressionCmc02g0057781
SyntenyCmc02g0057781
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTAGTTGTTTGTTTACTATTGAAACTTGGGATCCATTCATTTTGTTTGGTTTATCAATACAATCTTAAAAGTAACTTTGAACAACTGTTGTAATGAATGAGCTGTTCCTTAACCACGAAGCTATTTAACAAACTCCATCAAAAGAAACTTCAAGGTTTGATTCTCCATAACAATGATGGGTGAAAGAGTATTTAAGTTCCTCAACCATAACAGTCTTATTCAACAATATAAATTCAAACTCAATAAACATAAAGCTACAAAGTTTTGCGTATCATTTCATTGAGATTTATCGTTTATTTGAGTCTTTTCAAAGCATTCTAAACAACTCTTTAAAGTTTAAAGACCAAATAGATATGAATAGTAAAATGGATCGGGTTTGGTCAGAAGAAAGCTTACTTTTGCATATAAAGCTATATGCCTCTCAAATTGACATTCTGAATGGATACTTTACGGTGTTGAGTTCCATCAGAATTCTGAAGGATGAGCAATGCTTATTATTGGGAAGAAACATCCTCTTGGAAGGAACTCAAAGAACTGATTAAGGATTCATAAACCTTGATTCCCCTTATGAACACAGAATCACTCAAGAACTCATTGTGATCATGCAGTAAGATTGGAGTGTTAATCATTGGAGAGAAACCAAGAACAGGAATCCTCATCTGTCTCATGAATCGAGCATCCGTAGTCGTAGCCAAGATTTCGGGCTTAGAAAGCTTCCCTCCGGCGTCGGAAATGGCTGCCTTAAAAACAGCCCACCATGGATTTGAATCATTTGTCATCGTCATTAATGGACTTCCTAAGTAATCTCTTAAGGGTCCTTTCTCAATTATCTGATAAGTCATGTTCCGCCATGCCGGAGCCCATTCCTCCGCTATTCTTCTTCTCATAGCATCTGGGTCGGCGGTCGGCGGTAATCTGAGATCAAACCCAGCCTCCGCTTCCGACGGTTGCATGTTCATCACAAATCCTGTGGGGGAAGGAATTCCGGCATTGACAAAAACAGGATTCACAGAGATGACTTCTGAATTAGCAGCTTCACCGGCTTTGACTATTTCAAATTGGCTCTCTCTGAATCTACTGATAATCTCCACGCTCTTCATCAAATTCTCCATTGCGCTGTTATCGTACATTCTAGATCCATGGCCAGGGGTTCCTTTAGCCTTGATTATCAACGACCATGGCGATCTATCGGCGTAAAAAACCCTAAACTCATCTCCCGGTGAAGCTTGTCCTTCATCCATCATAAACCCTACATTCAACTCCTTGAATTCCTTCGACTGAACGAACTTCGCAACTCCATCGGAACCCCCAATCTCCTCATCCGGTACATACGATATATGAACCGTACGGACAGGGACGAAATCCCGGTTTCTGAGATTCCGAATGGCTTCAATATACTGGATGGCGATACACTTGTCATCTTGAGAACCACGGGCGAAGATTTTACCATCGGAGGTTCGGACAGCAGAGAATGGAGGATGAAGCCACTTAGAAGGCTCGGCAGGGACAGAGTCCATGTGAGAGTTAAGTAAAACCGAAGGCAAAGAAGGGTTTGATCCATACCAAGTCACAAGAAGAAGAGGCTTACCTGGACCGAACTCGAGTACCTCCGTATGGAGACCGATTTCTTGTGCTTGAGATCTGAGGAAGGCGACGGCGGAGGCGTAATCGGGATCTGGATGTGCGGTTTTGATTCTAAGGTAGCGTTGAAAGCGAGAGACCGGAGAATCTTGATCGGATTCATCATCAACGTACTGCGAATGGCTGAAAGAGAGAGGAAATGAAAGGAGAAGAAGATAAAGAGTAACTGAAAAAAAGCGATGGTGAAGACGGAAGTTCGACATGGGCTGCGCCGGTCGTTGCGTGGTCAAGTAGTCCAAGTAAGTGGCAGAGCCGGTCGGAAAGATGGCCGCCGATCGAACCTGTGGTCGGAAGAAGAAAACAATCTTATTAGCATCGAATAAGAACAGAACACACCAATTTTGTTTTTTTATTTTTATACTTTAAATCTTAGCTAAATGATTATATAAAACTTTATACATTCTTTTAATAATACCCTAAATTAATTATATAAAACTTTGTGTATGTGTGTGTGTATATATATGTATTAGGTTTGTTCTTCCCTTTTCATCCTAATTCTAGATGCTTGATGATTCAATTTAGAAGCTTAAAAAGAGAAAAATGATATATAGAACACAAATTTGGATTTTGCAAGTAAATTGGATTCGTGTCAGCTTCTCGAATTGTATACTATCAAAGGATTTGTAATAAGGTTGTG

mRNA sequence

TTAGTTGTTTGTTTACTATTGAAACTTGGGATCCATTCATTTTGTTTGGTTTATCAATACAATCTTAAAAGTAACTTTGAACAACTGTTGTAATGAATGAGCTGTTCCTTAACCACGAAGCTATTTAACAAACTCCATCAAAAGAAACTTCAAGGTTTGATTCTCCATAACAATGATGGGTGAAAGAGTATTTAAGTTCCTCAACCATAACAGTCTTATTCAACAATATAAATTCAAACTCAATAAACATAAAGCTACAAAGTTTTGCGTATCATTTCATTGAGATTTATCGTTTATTTGAGTCTTTTCAAAGCATTCTAAACAACTCTTTAAAGTTTAAAGACCAAATAGATATGAATAGTAAAATGGATCGGGTTTGGTCAGAAGAAAGCTTACTTTTGCATATAAAGCTATATGCCTCTCAAATTGACATTCTGAATGGATACTTTACGGTGTTGAGTTCCATCAGAATTCTGAAGGATGAGCAATGCTTATTATTGGGAAGAAACATCCTCTTGGAAGGAACTCAAAGAACTGATTAAGGATTCATAAACCTTGATTCCCCTTATGAACACAGAATCACTCAAGAACTCATTGTGATCATGCAGTAAGATTGGAGTGTTAATCATTGGAGAGAAACCAAGAACAGGAATCCTCATCTGTCTCATGAATCGAGCATCCGTAGTCGTAGCCAAGATTTCGGGCTTAGAAAGCTTCCCTCCGGCGTCGGAAATGGCTGCCTTAAAAACAGCCCACCATGGATTTGAATCATTTGTCATCGTCATTAATGGACTTCCTAAGTAATCTCTTAAGGGTCCTTTCTCAATTATCTGATAAGTCATGTTCCGCCATGCCGGAGCCCATTCCTCCGCTATTCTTCTTCTCATAGCATCTGGGTCGGCGGTCGGCGGTAATCTGAGATCAAACCCAGCCTCCGCTTCCGACGGTTGCATGTTCATCACAAATCCTGTGGGGGAAGGAATTCCGGCATTGACAAAAACAGGATTCACAGAGATGACTTCTGAATTAGCAGCTTCACCGGCTTTGACTATTTCAAATTGGCTCTCTCTGAATCTACTGATAATCTCCACGCTCTTCATCAAATTCTCCATTGCGCTGTTATCGTACATTCTAGATCCATGGCCAGGGGTTCCTTTAGCCTTGATTATCAACGACCATGGCGATCTATCGGCGTAAAAAACCCTAAACTCATCTCCCGGTGAAGCTTGTCCTTCATCCATCATAAACCCTACATTCAACTCCTTGAATTCCTTCGACTGAACGAACTTCGCAACTCCATCGGAACCCCCAATCTCCTCATCCGGTACATACGATATATGAACCGTACGGACAGGGACGAAATCCCGGTTTCTGAGATTCCGAATGGCTTCAATATACTGGATGGCGATACACTTGTCATCTTGAGAACCACGGGCGAAGATTTTACCATCGGAGGTTCGGACAGCAGAGAATGGAGGATGAAGCCACTTAGAAGGCTCGGCAGGGACAGAGTCCATGTGAGAGTTAAGTAAAACCGAAGGCAAAGAAGGGTTTGATCCATACCAAGTCACAAGAAGAAGAGGCTTACCTGGACCGAACTCGAGTACCTCCGTATGGAGACCGATTTCTTGTGCTTGAGATCTGAGGAAGGCGACGGCGGAGGCGTAATCGGGATCTGGATGTGCGGTTTTGATTCTAAGGTAGCGTTGAAAGCGAGAGACCGGAGAATCTTGATCGGATTCATCATCAACGTACTGCGAATGGCTGAAAGAGAGAGGAAATGAAAGGAGAAGAAGATAAAGAGTAACTGAAAAAAAGCGATGGTGAAGACGGAAGTTCGACATGGGCTGCGCCGGTCGTTGCGTGGTCAAGTAGTCCAAGTAAGTGGCAGAGCCGGTCGGAAAGATGGCCGCCGATCGAACCTGTGGTCGGAAGAAGAAAACAATCTTATTAGCATCGAATAAGAACAGAACACACCAATTTTGTTTTTTTATTTTTATACTTTAAATCTTAGCTAAATGATTATATAAAACTTTATACATTCTTTTAATAATACCCTAAATTAATTATATAAAACTTTGTGTATGTGTGTGTGTATATATATGTATTAGGTTTGTTCTTCCCTTTTCATCCTAATTCTAGATGCTTGATGATTCAATTTAGAAGCTTAAAAAGAGAAAAATGATATATAGAACACAAATTTGGATTTTGCAAGTAAATTGGATTCGTGTCAGCTTCTCGAATTGTATACTATCAAAGGATTTGTAATAAGGTTGTG

Coding sequence (CDS)

ATGTTCCGCCATGCCGGAGCCCATTCCTCCGCTATTCTTCTTCTCATAGCATCTGGGTCGGCGGTCGGCGGTAATCTGAGATCAAACCCAGCCTCCGCTTCCGACGGTTGCATGTTCATCACAAATCCTGTGGGGGAAGGAATTCCGGCATTGACAAAAACAGGATTCACAGAGATGACTTCTGAATTAGCAGCTTCACCGGCTTTGACTATTTCAAATTGGCTCTCTCTGAATCTACTGATAATCTCCACGCTCTTCATCAAATTCTCCATTGCGCTGTTATCGTACATTCTAGATCCATGGCCAGGGGTTCCTTTAGCCTTGATTATCAACGACCATGGCGATCTATCGGCGTAA

Protein sequence

MFRHAGAHSSAILLLIASGSAVGGNLRSNPASASDGCMFITNPVGEGIPALTKTGFTEMTSELAASPALTISNWLSLNLLIISTLFIKFSIALLSYILDPWPGVPLALIINDHGDLSA
Homology
[Close]
BLAST of Cmc02g0057781 vs. ExPASy TrEMBL
Match: A0A7C9DBD9 (Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 8.3e-26
Identity = 71/117 (60.68%), Postives = 80/117 (68.38%), Query Frame = 0 

Query: 1   MFRHAGAHSSAILLLIASGSAVGGNLRSNPASASDGCMFITNPVGEGIPALTKTGFTEMT 60
           MFR AGAHSSAI +   +GSAVGG   S P SAS+GC F+T P G  +PA   T FTE T
Sbjct: 1   MFREAGAHSSAICVSSDTGSAVGGTRTSKPTSASEGCKFMTKPAGVCVPAFRNTIFTETT 60

Query: 61  SELAASPALTISNWLSLNLLIISTLFIKFSIALLSYILDPWPGVPLALIINDHGDLS 118
           S  A +PA  ISN  + NLL++S L  KFSIALLSY L PWPG P ALI N HGDLS
Sbjct: 61  SPSAFNPAFIISNCEARNLLMLSILLNKFSIALLSYNLAPWPGAPCALITNHHGDLS 117

[Close]
BLAST of Cmc02g0057781 vs. ExPASy TrEMBL
Match: A0A7C8ZA92 (Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 3.6e-21
Identity = 67/117 (57.26%), Postives = 72/117 (61.54%), Query Frame = 0 

Query: 1   MFRHAGAHSSAILLLIASGSAVGGNLRSNPASASDGCMFITNPVGEGIPALTKTGFTEMT 60
           M R  GAHSSA      SG AVGG   S P SAS+GC FIT PVG G+PA   T FTE T
Sbjct: 1   MLREIGAHSSARRFSSDSGLAVGGTRMSRPTSASEGCKFITKPVGVGVPAFKNTKFTETT 60

Query: 61  SELAASPALTISNWLSLNLLIISTLFIKFSIALLSYILDPWPGVPLALIINDHGDLS 118
           S     PA T SN  + NLL +S LF KFSIALLSY   P P  PLALI N  G+LS
Sbjct: 61  SPAVFKPAFTKSNCDARNLLTLSMLFHKFSIALLSYNFAPCPDSPLALITNHQGELS 117

[Close]
BLAST of Cmc02g0057781 vs. ExPASy TrEMBL
Match: A0A7C9DAJ1 (Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 1.0e-20
Identity = 66/117 (56.41%), Postives = 71/117 (60.68%), Query Frame = 0 

Query: 1   MFRHAGAHSSAILLLIASGSAVGGNLRSNPASASDGCMFITNPVGEGIPALTKTGFTEMT 60
           M R  GAHSSA      SG AVGG   S P SAS+GC FIT P G G+PA   T FTE T
Sbjct: 9   MLREIGAHSSARRFSSDSGLAVGGTRMSRPTSASEGCKFITKPAGVGVPAFKNTKFTETT 68

Query: 61  SELAASPALTISNWLSLNLLIISTLFIKFSIALLSYILDPWPGVPLALIINDHGDLS 118
           S     PA T SN  + NLL +S LF KFSIALLSY   P P  PLALI N  G+LS
Sbjct: 69  SPAVFKPAFTKSNCDARNLLTLSMLFNKFSIALLSYNFAPCPDSPLALITNHQGELS 125

The following BLAST results are available for this feature:
BLAST of Cmc02g0057781 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc02g0057781 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc02g0057781 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A7C9DBD98.3e-2660.68Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1[more]
A0A7C8ZA923.6e-2157.26Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1[more]
A0A7C9DAJ11.0e-2056.41Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1[more]
BLAST of Cmc02g0057781 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc02g0057781.1Cmc02g0057781.1mRNA