Cmc02g0057241 (gene) Melon (Charmono) v1.1

Overview
NameCmc02g0057241
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr02: 23233276 .. 23234622 (+)
RNA-Seq ExpressionCmc02g0057241
SyntenyCmc02g0057241
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATAGATAATAACACAATGTTCATCACTACACCTCTCTCTCCTCGATTAAATCAGATTTATATGGCTGTTCCTTCAAAGACTGCTCTCCTCCATTAATGGATCTATAAGTATAGCGACTAGCCCAAAACAGATACTGCAAGAAATTAAGTCCACTCAAGATACACATAACCCAATAGAATCTCTCCAAATGATAATGATTCAAGCTTTTCCCATACAGCCATGGCCTGAGCCCACAAGCCTTAGTAACACCATTGACAAGAGTCACCAAAACAGAGCTAAAGTAATACCCCATGGCTAAGGAAGCCCATGACAGAGCAGTGGCTAAAGATCTCATACTCAAAGGGGCTTCTGTGAAGAAAAACTCCATCATTCCAGCCAAGGAGAACAAATCAGCCGACCCTAAAAACAAGTACTGCAAAGCCACCCAAAGGAAAGTGATGGGCAAAGGGTCAGGAGAATCCAATTTGTGGGTTTTGATAGCTAAGTTCTTTCTCTTGGTTTCAACTAATGCTGCTACTGCCATTGCCACTGTGGATAGAACTAGCCCTGTTCCGATTCTTTGTAAATGGGTTATTCCCATTTCGGATTTGGTGAGTTTTCTTGCAATTGGGAGAACGAGATGGTTGTAAGTTGGTGCGAGGATCATGATGAAGAGGACAGGGAACACAGGGAGAGAAGCAGGGGGGACTTTGAGAGAGCCGAGTTTGGTGTTCATGGTGGCGGCTTGTTGGACTGAGAATGTGGAGAGCTGTGCGAGACAGCAGTTGAGCATTATGGTAGAAGTGAAAATGGGGAGAACTTTTAGTACTATTTTGGCTTCTTCTACTTGTTTGACGGTGCAATTTAGTTGTGGATGGTTGGGGTTATCGATTGTAGCTTTATTCAGGAACTCCATGGCTTGTGTTTGAATTGGAATTGGGTCGTTTTCCTTTTCCAGAGTCTGTCTTTGCTCATCAACTATAATATCTGTGGTAGCATCTGAAGATACTGAACTCGTGGATATATTAATCACAACGTTATTACGAGTCTTTTTCTTCCTACTGTTGAAAGCAGCTGAGACTAGAACCTGTCCCAAAAGCAATTAGAATGAATGTTCAGTGACATATTACTGTATTAGTAACAAATTGATTTGAGGTTCTTCACTAAGTTTGGTTATTATAGCTTGTTGGTTGTAATAGTCTGCATTTGAAGTACTAACTACTTTTACAAATGAGTAGAGAACATAGTTACAAAGTAGTAAACAGTAGACAATGAACATAGTTACAAATGATTAGAGGCTCTTCAATCTAGTCCCGCAGAAGTTCAGCTAACATTTAGTATCACGAAATGTAAGTTAATCTTCCTCA

mRNA sequence

TATAGATAATAACACAATGTTCATCACTACACCTCTCTCTCCTCGATTAAATCAGATTTATATGGCTGTTCCTTCAAAGACTGCTCTCCTCCATTAATGGATCTATAAGTATAGCGACTAGCCCAAAACAGATACTGCAAGAAATTAAGTCCACTCAAGATACACATAACCCAATAGAATCTCTCCAAATGATAATGATTCAAGCTTTTCCCATACAGCCATGGCCTGAGCCCACAAGCCTTAGTAACACCATTGACAAGAGTCACCAAAACAGAGCTAAAGTAATACCCCATGGCTAAGGAAGCCCATGACAGAGCAGTGGCTAAAGATCTCATACTCAAAGGGGCTTCTGTGAAGAAAAACTCCATCATTCCAGCCAAGGAGAACAAATCAGCCGACCCTAAAAACAAGTACTGCAAAGCCACCCAAAGGAAAGTGATGGGCAAAGGGTCAGGAGAATCCAATTTGTGGGTTTTGATAGCTAAGTTCTTTCTCTTGGTTTCAACTAATGCTGCTACTGCCATTGCCACTGTGGATAGAACTAGCCCTGTTCCGATTCTTTGTAAATGGGTTATTCCCATTTCGGATTTGGTGAGTTTTCTTGCAATTGGGAGAACGAGATGGTTGTAAGTTGGTGCGAGGATCATGATGAAGAGGACAGGGAACACAGGGAGAGAAGCAGGGGGGACTTTGAGAGAGCCGAGTTTGGTGTTCATGGTGGCGGCTTGTTGGACTGAGAATGTGGAGAGCTGTGCGAGACAGCAGTTGAGCATTATGGTAGAAGTGAAAATGGGGAGAACTTTTAGTACTATTTTGGCTTCTTCTACTTGTTTGACGGTGCAATTTAGTTGTGGATGGTTGGGGTTATCGATTGTAGCTTTATTCAGGAACTCCATGGCTTGTGTTTGAATTGGAATTGGGTCGTTTTCCTTTTCCAGAGTCTGTCTTTGCTCATCAACTATAATATCTGTGGTAGCATCTGAAGATACTGAACTCGTGGATATATTAATCACAACGTTATTACGAGTCTTTTTCTTCCTACTGTTGAAAGCAGCTGAGACTAGAACCTGTCCCAAAAGCAATTAGAATGAATGTTCAGTGACATATTACTGTATTAGTAACAAATTGATTTGAGGTTCTTCACTAAGTTTGGTTATTATAGCTTGTTGGTTGTAATAGTCTGCATTTGAAGTACTAACTACTTTTACAAATGAGTAGAGAACATAGTTACAAAGTAGTAAACAGTAGACAATGAACATAGTTACAAATGATTAGAGGCTCTTCAATCTAGTCCCGCAGAAGTTCAGCTAACATTTAGTATCACGAAATGTAAGTTAATCTTCCTCA

Coding sequence (CDS)

ATGGCTAAGGAAGCCCATGACAGAGCAGTGGCTAAAGATCTCATACTCAAAGGGGCTTCTGTGAAGAAAAACTCCATCATTCCAGCCAAGGAGAACAAATCAGCCGACCCTAAAAACAAGTACTGCAAAGCCACCCAAAGGAAAGTGATGGGCAAAGGGTCAGGAGAATCCAATTTGTGGGTTTTGATAGCTAAGTTCTTTCTCTTGGTTTCAACTAATGCTGCTACTGCCATTGCCACTGTGGATAGAACTAGCCCTGTTCCGATTCTTTGTAAATGGGTTATTCCCATTTCGGATTTGGTGAGTTTTCTTGCAATTGGGAGAACGAGATGGTTGTAA

Protein sequence

MAKEAHDRAVAKDLILKGASVKKNSIIPAKENKSADPKNKYCKATQRKVMGKGSGESNLWVLIAKFFLLVSTNAATAIATVDRTSPVPILCKWVIPISDLVSFLAIGRTRWL
Homology
[Close]
BLAST of Cmc02g0057241 vs. NCBI nr
Match: KAG5618220.1 (hypothetical protein H5410_018044 [Solanum commersonii])

HSP 1 Score: 90.9 bits (224), Expect = 7.6e-15
Identity = 52/87 (59.77%), Postives = 61/87 (70.11%), Query Frame = 0 

Query: 1  MAKEAHDRAVAKDLILKGASVKKNSIIPAKENKSADPKNKYCKATQRKVMGKGSGESNLW 60
          MA +A + AV  DL+LKGASVKKNSI PAK  +SADP+N+YC ATQR V+G GS E    
Sbjct: 1  MASDAQESAVVNDLMLKGASVKKNSIRPAKLKRSADPRNRYCNATQRNVIGSGSVEFINP 60

Query: 61 VLIAKFFLLVSTNAATAIATVDRTSPV 88
             A  F  +ST AATA+AT DR SPV
Sbjct: 61 DCSATPFRFISTRAATAMATTDRNSPV 87

[Close]
BLAST of Cmc02g0057241 vs. NCBI nr
Match: KAF3556176.1 (hypothetical protein F2Q69_00012308 [Brassica cretica])

HSP 1 Score: 54.3 bits (129), Expect = 7.9e-04
Identity = 26/39 (66.67%), Postives = 30/39 (76.92%), Query Frame = 0 

Query: 74  AATAIATVDRTSPVPILCKWVIPISDLVSFLAIGRTRWL 113
           AAT IAT +RTSPVP+  +WV P+S LV FLA GR RWL
Sbjct: 216 AATTIATTERTSPVPMRWRWVTPVSVLVVFLARGRRRWL 254

[Close]
BLAST of Cmc02g0057241 vs. ExPASy TrEMBL
Match: A0A7C9CFE1 (Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.3e-20
Identity = 56/97 (57.73%), Postives = 72/97 (74.23%), Query Frame = 0 

Query: 15  ILKGASVKKNSIIPAKENKSADPKNKYCKATQRKVMGKGSGESNLWVLIAKFFLLVSTNA 74
           +L+GASVKKNS IPA+ N+SADP N Y  A Q+KVMG G+ ES++   +A  FLL ST A
Sbjct: 1   MLEGASVKKNSSIPARVNRSADPNNAYWMAIQKKVMGNGALESSMSCSVATCFLLTSTRA 60

Query: 75  ATAIATVDRTSPVPILCKWVIPISDLVSFLAIGRTRW 112
           A A+AT++RTSPVPILC+W +P+S  V+F A G   W
Sbjct: 61  AAAMATMERTSPVPILCRWEMPVSLFVNFRANGMMTW 97

[Close]
BLAST of Cmc02g0057241 vs. ExPASy TrEMBL
Match: A0A3Q7FQN9 (Uncharacterized protein OS=Solanum lycopersicum OX=4081 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 5.7e-16
Identity = 53/87 (60.92%), Postives = 61/87 (70.11%), Query Frame = 0 

Query: 1  MAKEAHDRAVAKDLILKGASVKKNSIIPAKENKSADPKNKYCKATQRKVMGKGSGESNLW 60
          MA +A + AV  DL+LKGASVKKNSI PAK  +SADP+N+YC ATQR V+G GS E    
Sbjct: 1  MASDAQESAVVNDLMLKGASVKKNSIRPAKLKRSADPRNRYCNATQRNVIGSGSVEFINP 60

Query: 61 VLIAKFFLLVSTNAATAIATVDRTSPV 88
             A  F  +ST AATAIAT DR SPV
Sbjct: 61 DCSATLFRFISTRAATAIATTDRNSPV 87

[Close]
BLAST of Cmc02g0057241 vs. ExPASy TrEMBL
Match: J3N7H7 (Uncharacterized protein OS=Oryza brachyantha OX=4533 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 5.0e-04
Identity = 37/100 (37.00%), Postives = 52/100 (52.00%), Query Frame = 0 

Query: 13  DLILKGASVKKNSIIPAKENKSADPKNKYCKATQRKVMGKGSGESNLWVLIAKFFLLVST 72
           D I   AS++KNS  P KE  S  P+ K C  +Q   +G  +            FLLVST
Sbjct: 6   DFIPMDASLQKNSRSPTKEVTSTTPRRKNCGVSQNTDIGAPAA-----------FLLVST 65

Query: 73  NAAT---AIATVDRTSPVPILCKWVIPISDLVSFLAIGRT 110
            AAT   A A +++T+P P+ C+WV P +  V+  + G T
Sbjct: 66  TAATVGAAQAAMEKTNPTPMRCRWVTPPTRPVALRSAGTT 94

The following BLAST results are available for this feature:
BLAST of Cmc02g0057241 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG5618220.17.6e-1559.77hypothetical protein H5410_018044 [Solanum commersonii][more]
KAF3556176.17.9e-0466.67hypothetical protein F2Q69_00012308 [Brassica cretica][more]
BLAST of Cmc02g0057241 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc02g0057241 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A7C9CFE11.3e-2057.73Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1[more]
A0A3Q7FQN95.7e-1660.92Uncharacterized protein OS=Solanum lycopersicum OX=4081 PE=4 SV=1[more]
J3N7H75.0e-0437.00Uncharacterized protein OS=Oryza brachyantha OX=4533 PE=4 SV=1[more]
BLAST of Cmc02g0057241 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc02g0057241.1Cmc02g0057241.1mRNA