Cmc02g0056791 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc02g0056791
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Pentatricopeptide repeat-containing protein
Location	CMiso1.1chr02: 23026540 .. 23029246 (-)
RNA-Seq Expression	Cmc02g0056791
Synteny	Cmc02g0056791

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCCCCAACCTGGTCGCGTTTTCCGGCGAGTCTCCGACGAGAAACGGCAACGACCCACGCAGGTAGACGTCGATTGTTCTTCTCCGATGACCCATTTACTTGCTAGCAGGTTCAGACCCACGATTTTGTGCCTGAGATTGGAGGCATTTTCACACACGCAGTCTTCTCAGTCTCCGGCGAATCTACGAAACCACGTCGACGGTTACGATTACATTACTCCGGCAATTGACGCGAGTAGACACCCACGCGATTATCTTTTCCTGGTGTTGGGGTTTCTCCGTGCATAGCAATGCACGCTCGCCATTTGTTCGATGAAATGCCGCTGAGAAGATGCGTTTCATTGTTGAAGTTAAAATGGGATAGCTTCATTGCGCAATCCGTCTATACGCAGCATCGGTTTTGTTCCCTTCATTCCACCGTAAACAATGGAGCTGCTGTATCAAAACTGTGTGAAGTGATTTCATGCACGATCGGTGGTTTAGATGAATTGGAATCCAGTCTGAACAAATGTACAATATCATTGACATCTTCATTAGTTACCCAAGTTATTGATTCTAGCAAAAATGAAGCTCCCACTAGAAGATTACTCAGATTTTTCTTGTGGTCTCTCAAGAAGTTAAACCACACTTTAGAAGATGAAGATTTCAATAATGCCATCCGCTTTTTTGCTCAGAAGAAGGACTACACTGCCATTAACATTTTACTTTCTAATCTTAAGAAAGCCGACCGGGCAATGGACGGCCAGACTTTCAGTTTTGTAGCTGAAGCTTTTGTCAAAATGAATAGAGACGATGAAGCATTGGGTCTGTTCAAGAACCTGGAGAAGTACAAATGCCCTCATGACCAATTTACTGTCGTTGCTATTATTACTGCTCTTTGTTCGAAAGGGCATGCTAAAAGAGCAGAAGGAGTTGTCTTGCACCACAAGGACAAGATTTCTAGTACAATGAGTTGCATCTATAGAAGCCTTCTATATGGATGGTCTATTAAGAAGAACACAAAAGAAGCAAGAAGAATACTGAAAGAAATGAAGTCAGATGGAACCATGCCAGATTTGTTCAGCTACAACACTTTTCTCAAGTGTCTTTGTGAGAAAAATGTTGAGAAAAATCCTTCAGGTCTTGTGCCTGAAGCCTTGAATGTGATGATGGAAATGAGATCCTACAAAATTGCTCCCAACTCAATCAGTTACAACATATTGTTATCATGTCTATGCAAAACTAGGAGAGTGAAGGAATCTTGTAGAATCCTCGAGATGATGAAACGATCGGGTTGTCGACCCGATTGTGTAAGCTATTATCTCGTTGCGAGAGTGTTGTTCTTGACTGGAAGATTTGGGAAAGGGCGTGAAATCGTGGATGAGATGATTGAAGAAGGATTGACCCCTGATCGAAAATTCTACTACGAGTTGATTGGTATTCTGTGTGGTGTAGAGAGAACAAATTATGCAGTTGAGCTTTTTGAGAAGATGAAGAGAAGCTCATTGGGGGGTTATGGGCCAGTTTATGATGTGCTTATACCAAAGGTTTGTAGAGGAGGTGATTTTGAAATGGGGAGGCAGCTGTGGGAGGAAGCCATGGCTATGGGTGTTTCGCTTAACTGCTCAAGTGAGATTTTGGATCCTTCAATCACAAAGGTTTTCAAGCCAACAAGAAAGATTGAGAATAAAATTGTTGAAGAATGCAATACTGCTGAGAAGCAGAACAAAGCTGCAGCTGAGAAACCAAATAAAAAGAGAAAGAAAGGTAAGTAAGAATCTGTCTTGCAAAGAACTTCTTAATTTTTTTTTTTAACTTGGTCAAATTAAATCATTTCATAGGTCTCCTTGTTCAAGATTTGTATAGTAACTTAATGATACCCCTAAACGATTTTGAATGGAGATTTAGAAGATTTTCATTCTAAGATCTTAAGCCTCCACATGTTGTAAAAGAATTTTGAGTTCAAACATATGTAGGGTAGAAGGTAAGAAACTTTGATAAACCGAGAATATATACTTTATATCAGTTGTATACATTTTCATTACATCCACTTTTTACCTTCAAATTTGTTTAATTCGAAACATTAATTAATATAACATTGAAATGCTATTTTATTCGTATTTAATAAATACAATTTTCAGTTCGTATTTCAGGGTGATCTAAGTCGAAATGTTATGATATCACTATTGAACTAAATTTACTTTTATTTGTTCAATAATATAATGAATTTATTATATTTACTATTGGAAATTTGGGAAAAAGAAGATAATTTATTTAAAATAAATAAAAGAAAAAGGTGTAATTTAGTATTGTAAATTTCAAGTAGAGAATTAAAATAAACAAAAATAGGAGTGTGGTATCCAACTAACGAATACGTCCTTTCGCCATTTGACAGAAGGAGGTAGGAAAATCGGATTTTCTTTGTTATTTAAAGCTACAAAAATAAAATAAATTCCCAATAATTTTCACAAAACAATGGATCCAATCGCAGATCAGACAAATGCATATGATTTCTGATACTCCACATTAAATCCATCCCATCTTCACTATAATCATCAAACTTTGATTAATTAGAATCAAGTTTTTCGATCTATCGAATTGATGTAATGAAATAGAAACGAGACAAAAAAAATTTAGGGATGGGTTATTATTATTTTACATTATATTTCGAATCATTCGAGGAAAGAAGATCCCTTCAATAGTTCAAATCCCACACAGTCGGTGGTACT

mRNA sequence

GCCCCCAACCTGGTCGCGTTTTCCGGCGAGTCTCCGACGAGAAACGGCAACGACCCACGCAGGTAGACGTCGATTGTTCTTCTCCGATGACCCATTTACTTGCTAGCAGGTTCAGACCCACGATTTTGTGCCTGAGATTGGAGGCATTTTCACACACGCAGTCTTCTCAGTCTCCGGCGAATCTACGAAACCACGTCGACGGTTACGATTACATTACTCCGGCAATTGACGCGAGTAGACACCCACGCGATTATCTTTTCCTGGTGTTGGGGTTTCTCCGTGCATAGCAATGCACGCTCGCCATTTGTTCGATGAAATGCCGCTGAGAAGATGCGTTTCATTGTTGAAGTTAAAATGGGATAGCTTCATTGCGCAATCCGTCTATACGCAGCATCGGTTTTGTTCCCTTCATTCCACCGTAAACAATGGAGCTGCTGTATCAAAACTGTGTGAAGTGATTTCATGCACGATCGGTGGTTTAGATGAATTGGAATCCAGTCTGAACAAATGTACAATATCATTGACATCTTCATTAGTTACCCAAGTTATTGATTCTAGCAAAAATGAAGCTCCCACTAGAAGATTACTCAGATTTTTCTTGTGGTCTCTCAAGAAGTTAAACCACACTTTAGAAGATGAAGATTTCAATAATGCCATCCGCTTTTTTGCTCAGAAGAAGGACTACACTGCCATTAACATTTTACTTTCTAATCTTAAGAAAGCCGACCGGGCAATGGACGGCCAGACTTTCAGTTTTGTAGCTGAAGCTTTTGTCAAAATGAATAGAGACGATGAAGCATTGGGTCTGTTCAAGAACCTGGAGAAGTACAAATGCCCTCATGACCAATTTACTGTCGTTGCTATTATTACTGCTCTTTGTTCGAAAGGGCATGCTAAAAGAGCAGAAGGAGTTGTCTTGCACCACAAGGACAAGATTTCTAGTACAATGAGTTGCATCTATAGAAGCCTTCTATATGGATGGTCTATTAAGAAGAACACAAAAGAAGCAAGAAGAATACTGAAAGAAATGAAGTCAGATGGAACCATGCCAGATTTGTTCAGCTACAACACTTTTCTCAAGTGTCTTTGTGAGAAAAATGTTGAGAAAAATCCTTCAGGTCTTGTGCCTGAAGCCTTGAATGTGATGATGGAAATGAGATCCTACAAAATTGCTCCCAACTCAATCAGTTACAACATATTGTTATCATGTCTATGCAAAACTAGGAGAGTGAAGGAATCTTGTAGAATCCTCGAGATGATGAAACGATCGGGTTGTCGACCCGATTGTGTAAGCTATTATCTCGTTGCGAGAGTGTTGTTCTTGACTGGAAGATTTGGGAAAGGGCGTGAAATCGTGGATGAGATGATTGAAGAAGGATTGACCCCTGATCGAAAATTCTACTACGAGTTGATTGGTATTCTGTGTGGTGTAGAGAGAACAAATTATGCAGTTGAGCTTTTTGAGAAGATGAAGAGAAGCTCATTGGGGGGTTATGGGCCAGTTTATGATGTGCTTATACCAAAGGTTTGTAGAGGAGGTGATTTTGAAATGGGGAGGCAGCTGTGGGAGGAAGCCATGGCTATGGGTGTTTCGCTTAACTGCTCAAGTGAGATTTTGGATCCTTCAATCACAAAGGTTTTCAAGCCAACAAGAAAGATTGAGAATAAAATTGTTGAAGAATGCAATACTGCTGAGAAGCAGAACAAAGCTGCAGCTGAGAAACCAAATAAAAAGAGAAAGAAAGGTAAGTAAGAATCTGTCTTGCAAAGAACTTCTTAATTTTTTTTTTTAACTTGGTCAAATTAAATCATTTCATAGGTCTCCTTGTTCAAGATTTGTATAGTAACTTAATGATACCCCTAAACGATTTTGAATGGAGATTTAGAAGATTTTCATTCTAAGATCTTAAGCCTCCACATGTTGTAAAAGAATTTTGAGTTCAAACATATGTAGGGTAGAAGGTAAGAAACTTTGATAAACCGAGAATATATACTTTATATCAGTTGTATACATTTTCATTACATCCACTTTTTACCTTCAAATTTGTTTAATTCGAAACATTAATTAATATAACATTGAAATGCTATTTTATTCGTATTTAATAAATACAATTTTCAGTTCGTATTTCAGGGTGATCTAAGTCGAAATGTTATGATATCACTATTGAACTAAATTTACTTTTATTTGTTCAATAATATAATGAATTTATTATATTTACTATTGGAAATTTGGGAAAAAGAAGATAATTTATTTAAAATAAATAAAAGAAAAAGGTGTAATTTAGTATTGTAAATTTCAAGTAGAGAATTAAAATAAACAAAAATAGGAGTGTGGTATCCAACTAACGAATACGTCCTTTCGCCATTTGACAGAAGGAGGTAGGAAAATCGGATTTTCTTTGTTATTTAAAGCTACAAAAATAAAATAAATTCCCAATAATTTTCACAAAACAATGGATCCAATCGCAGATCAGACAAATGCATATGATTTCTGATACTCCACATTAAATCCATCCCATCTTCACTATAATCATCAAACTTTGATTAATTAGAATCAAGTTTTTCGATCTATCGAATTGATGTAATGAAATAGAAACGAGACAAAAAAAATTTAGGGATGGGTTATTATTATTTTACATTATATTTCGAATCATTCGAGGAAAGAAGATCCCTTCAATAGTTCAAATCCCACACAGTCGGTGGTACT

Coding sequence (CDS)

ATGCACGCTCGCCATTTGTTCGATGAAATGCCGCTGAGAAGATGCGTTTCATTGTTGAAGTTAAAATGGGATAGCTTCATTGCGCAATCCGTCTATACGCAGCATCGGTTTTGTTCCCTTCATTCCACCGTAAACAATGGAGCTGCTGTATCAAAACTGTGTGAAGTGATTTCATGCACGATCGGTGGTTTAGATGAATTGGAATCCAGTCTGAACAAATGTACAATATCATTGACATCTTCATTAGTTACCCAAGTTATTGATTCTAGCAAAAATGAAGCTCCCACTAGAAGATTACTCAGATTTTTCTTGTGGTCTCTCAAGAAGTTAAACCACACTTTAGAAGATGAAGATTTCAATAATGCCATCCGCTTTTTTGCTCAGAAGAAGGACTACACTGCCATTAACATTTTACTTTCTAATCTTAAGAAAGCCGACCGGGCAATGGACGGCCAGACTTTCAGTTTTGTAGCTGAAGCTTTTGTCAAAATGAATAGAGACGATGAAGCATTGGGTCTGTTCAAGAACCTGGAGAAGTACAAATGCCCTCATGACCAATTTACTGTCGTTGCTATTATTACTGCTCTTTGTTCGAAAGGGCATGCTAAAAGAGCAGAAGGAGTTGTCTTGCACCACAAGGACAAGATTTCTAGTACAATGAGTTGCATCTATAGAAGCCTTCTATATGGATGGTCTATTAAGAAGAACACAAAAGAAGCAAGAAGAATACTGAAAGAAATGAAGTCAGATGGAACCATGCCAGATTTGTTCAGCTACAACACTTTTCTCAAGTGTCTTTGTGAGAAAAATGTTGAGAAAAATCCTTCAGGTCTTGTGCCTGAAGCCTTGAATGTGATGATGGAAATGAGATCCTACAAAATTGCTCCCAACTCAATCAGTTACAACATATTGTTATCATGTCTATGCAAAACTAGGAGAGTGAAGGAATCTTGTAGAATCCTCGAGATGATGAAACGATCGGGTTGTCGACCCGATTGTGTAAGCTATTATCTCGTTGCGAGAGTGTTGTTCTTGACTGGAAGATTTGGGAAAGGGCGTGAAATCGTGGATGAGATGATTGAAGAAGGATTGACCCCTGATCGAAAATTCTACTACGAGTTGATTGGTATTCTGTGTGGTGTAGAGAGAACAAATTATGCAGTTGAGCTTTTTGAGAAGATGAAGAGAAGCTCATTGGGGGGTTATGGGCCAGTTTATGATGTGCTTATACCAAAGGTTTGTAGAGGAGGTGATTTTGAAATGGGGAGGCAGCTGTGGGAGGAAGCCATGGCTATGGGTGTTTCGCTTAACTGCTCAAGTGAGATTTTGGATCCTTCAATCACAAAGGTTTTCAAGCCAACAAGAAAGATTGAGAATAAAATTGTTGAAGAATGCAATACTGCTGAGAAGCAGAACAAAGCTGCAGCTGAGAAACCAAATAAAAAGAGAAAGAAAGGTAAGTAA

Protein sequence

MHARHLFDEMPLRRCVSLLKLKWDSFIAQSVYTQHRFCSLHSTVNNGAAVSKLCEVISCTIGGLDELESSLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFNNAIRFFAQKKDYTAINILLSNLKKADRAMDGQTFSFVAEAFVKMNRDDEALGLFKNLEKYKCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRILKEMKSDGTMPDLFSYNTFLKCLCEKNVEKNPSGLVPEALNVMMEMRSYKIAPNSISYNILLSCLCKTRRVKESCRILEMMKRSGCRPDCVSYYLVARVLFLTGRFGKGREIVDEMIEEGLTPDRKFYYELIGILCGVERTNYAVELFEKMKRSSLGGYGPVYDVLIPKVCRGGDFEMGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEECNTAEKQNKAAAEKPNKKRKKGK

Homology

[Close]

BLAST of Cmc02g0056791 vs. NCBI nr
Match: XP_008453221.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Cucumis melo] >KAA0057958.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 972.6 bits (2513), Expect = 1.2e-279
Identity = 483/486 (99.38%), Postives = 485/486 (99.79%), Query Frame = 0


Query: 1   MHARHLFDEMPLRRCVSLLKLKWDSFIAQSVYTQHRFCSLHSTVNNGAAVSKLCEVISCT 60
           MHARH+FDEMPLRRCVSLLKLKWDSFIAQSV TQHRFCSLHSTVNNGAAVSKLCEVISCT
Sbjct: 1   MHARHMFDEMPLRRCVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCT 60

Query: 61  IGGLDELESSLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN 120
           IGGLDELESSLN+CTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN
Sbjct: 61  IGGLDELESSLNQCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN 120

Query: 121 NAIRFFAQKKDYTAINILLSNLKKADRAMDGQTFSFVAEAFVKMNRDDEALGLFKNLEKY 180
           NAIRFFAQKKDYTAINILLSNLKKADRAMDGQTFSFVAEAFVKMNRDDEALGLFKNLEKY
Sbjct: 121 NAIRFFAQKKDYTAINILLSNLKKADRAMDGQTFSFVAEAFVKMNRDDEALGLFKNLEKY 180

Query: 181 KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA 240
           KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA
Sbjct: 181 KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA 240

Query: 241 RRILKEMKSDGTMPDLFSYNTFLKCLCEKNVEKNPSGLVPEALNVMMEMRSYKIAPNSIS 300
           RRILKEMKSDGTMPDLFSYNTFLKCLCEKNVEKNPSGLVPEALNVMMEMRSYKIAPNSIS
Sbjct: 241 RRILKEMKSDGTMPDLFSYNTFLKCLCEKNVEKNPSGLVPEALNVMMEMRSYKIAPNSIS 300

Query: 301 YNILLSCLCKTRRVKESCRILEMMKRSGCRPDCVSYYLVARVLFLTGRFGKGREIVDEMI 360
           YNILLSCLCKTRRVKESCRILEMMKRSGCRPDCVSYYLVARVLFLTGRFGKGREIVDEMI
Sbjct: 301 YNILLSCLCKTRRVKESCRILEMMKRSGCRPDCVSYYLVARVLFLTGRFGKGREIVDEMI 360

Query: 361 EEGLTPDRKFYYELIGILCGVERTNYAVELFEKMKRSSLGGYGPVYDVLIPKVCRGGDFE 420
           EEGLTPDRKFYYELIGILCGVERTNYAVELFEKMKRSSLGGYGPVYDVLIPKVCRGGDFE
Sbjct: 361 EEGLTPDRKFYYELIGILCGVERTNYAVELFEKMKRSSLGGYGPVYDVLIPKVCRGGDFE 420

Query: 421 MGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEECNTAEKQNKAAAEKPN 480
           MGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEECNTAEKQNKAAAEKPN
Sbjct: 421 MGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEECNTAEKQNKAAAEKPN 480

Query: 481 KKRKKG 487
           KKRKKG
Sbjct: 481 KKRKKG 486

[Close]

BLAST of Cmc02g0056791 vs. NCBI nr
Match: XP_004138304.1 (pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Cucumis sativus])

HSP 1 Score: 943.7 bits (2438), Expect = 6.2e-271
Identity = 466/487 (95.69%), Postives = 481/487 (98.77%), Query Frame = 0


Query: 1   MHARHLFDEMPLRRCVSLLKLKWDSFIAQSVYTQHRFCSLHSTVNNGAAVSKLCEVISCT 60
           MHARHLFDEM LRRCVSLLKLKWDSFIAQSV TQHRFCSLHSTVNNGAAVSKLCEVISCT
Sbjct: 1   MHARHLFDEMSLRRCVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCT 60

Query: 61  IGGLDELESSLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN 120
           IGGLDELESSLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN
Sbjct: 61  IGGLDELESSLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN 120

Query: 121 NAIRFFAQKKDYTAINILLSNLKKADRAMDGQTFSFVAEAFVKMNRDDEALGLFKNLEKY 180
           NAIRFFAQKKDYTA+NILLSNLKKADRAMDGQTF FVAEAFVKM+R+DEALGLFKNLEKY
Sbjct: 121 NAIRFFAQKKDYTAVNILLSNLKKADRAMDGQTFGFVAEAFVKMDREDEALGLFKNLEKY 180

Query: 181 KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA 240
           KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA
Sbjct: 181 KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA 240

Query: 241 RRILKEMKSDGTMPDLFSYNTFLKCLCEKNVEKNPSGLVPEALNVMMEMRSYKIAPNSIS 300
           RRILKEMKSDGTMPDLF YNTFLKCLCEKNVEKNPSGLVPE+LNVMMEMRSYKI+PNSIS
Sbjct: 241 RRILKEMKSDGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKISPNSIS 300

Query: 301 YNILLSCLCKTRRVKESCRILEMMKRSGCRPDCVSYYLVARVLFLTGRFGKGREIVDEMI 360
           YNILLSCLCKTRRVKESC+ILEMMKR+GC+PDCVSYYL+ARVLFLTGRFGKGREIVDEMI
Sbjct: 301 YNILLSCLCKTRRVKESCKILEMMKRTGCQPDCVSYYLMARVLFLTGRFGKGREIVDEMI 360

Query: 361 EEGLTPDRKFYYELIGILCGVERTNYAVELFEKMKRSSLGGYGPVYDVLIPKVCRGGDFE 420
           EEGLTPDRKFYY+LIGILCGVERTNYA+ELFEKMKRSSLGGYGPVYDVLIPK+CRGG+FE
Sbjct: 361 EEGLTPDRKFYYDLIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFE 420

Query: 421 MGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEECNTAEKQNKAAAEKPN 480
           MGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEE N+AEKQNKAAAEKP 
Sbjct: 421 MGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEEFNSAEKQNKAAAEKPK 480

Query: 481 KKRKKGK 488
           +KRKKGK
Sbjct: 481 EKRKKGK 487

[Close]

BLAST of Cmc02g0056791 vs. NCBI nr
Match: KAE8652422.1 (hypothetical protein Csa_013999 [Cucumis sativus])

HSP 1 Score: 887.9 bits (2293), Expect = 4.0e-254
Identity = 434/455 (95.38%), Postives = 448/455 (98.46%), Query Frame = 0


Query: 1   MHARHLFDEMPLRRCVSLLKLKWDSFIAQSVYTQHRFCSLHSTVNNGAAVSKLCEVISCT 60
           MHARHLFDEM LRRCVSLLKLKWDSFIAQSV TQHRFCSLHSTVNNGAAVSKLCEVISCT
Sbjct: 1   MHARHLFDEMSLRRCVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCT 60

Query: 61  IGGLDELESSLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN 120
           IGGLDELESSLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN
Sbjct: 61  IGGLDELESSLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN 120

Query: 121 NAIRFFAQKKDYTAINILLSNLKKADRAMDGQTFSFVAEAFVKMNRDDEALGLFKNLEKY 180
           NAIRFFAQKKDYTA+NILLSNLKKADRAMDGQTF FVAEAFVKM+R+DEALGLFKNLEKY
Sbjct: 121 NAIRFFAQKKDYTAVNILLSNLKKADRAMDGQTFGFVAEAFVKMDREDEALGLFKNLEKY 180

Query: 181 KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA 240
           KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA
Sbjct: 181 KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA 240

Query: 241 RRILKEMKSDGTMPDLFSYNTFLKCLCEKNVEKNPSGLVPEALNVMMEMRSYKIAPNSIS 300
           RRILKEMKSDGTMPDLF YNTFLKCLCEKNVEKNPSGLVPE+LNVMMEMRSYKI+PNSIS
Sbjct: 241 RRILKEMKSDGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKISPNSIS 300

Query: 301 YNILLSCLCKTRRVKESCRILEMMKRSGCRPDCVSYYLVARVLFLTGRFGKGREIVDEMI 360
           YNILLSCLCKTRRVKESC+ILEMMKR+GC+PDCVSYYL+ARVLFLTGRFGKGREIVDEMI
Sbjct: 301 YNILLSCLCKTRRVKESCKILEMMKRTGCQPDCVSYYLMARVLFLTGRFGKGREIVDEMI 360

Query: 361 EEGLTPDRKFYYELIGILCGVERTNYAVELFEKMKRSSLGGYGPVYDVLIPKVCRGGDFE 420
           EEGLTPDRKFYY+LIGILCGVERTNYA+ELFEKMKRSSLGGYGPVYDVLIPK+CRGG+FE
Sbjct: 361 EEGLTPDRKFYYDLIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFE 420

Query: 421 MGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTR 456
           MGRQLWEEAMAMGVSLNCSSEILDPSITK   P+R
Sbjct: 421 MGRQLWEEAMAMGVSLNCSSEILDPSITKKEIPSR 455

[Close]

BLAST of Cmc02g0056791 vs. NCBI nr
Match: XP_038878633.1 (pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Benincasa hispida])

HSP 1 Score: 868.2 bits (2242), Expect = 3.3e-248
Identity = 428/487 (87.89%), Postives = 455/487 (93.43%), Query Frame = 0


Query: 1   MHARHLFDEMPLRRCVSLLKLKWDSFIAQSVYTQHRFCSLHSTVNNGAAVSKLCEVISCT 60
           MHARH+FDE  LRRCVSLLKLKWDSF+ Q + TQH FCSLHST+NNG +V KLCEVIS T
Sbjct: 24  MHARHMFDERSLRRCVSLLKLKWDSFVVQPICTQHCFCSLHSTINNGTSVLKLCEVISLT 83

Query: 61  IGGLDELESSLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN 120
           IGGL+ELESSLNKCTI LTSSLVTQVIDS KNE  TRRLLRFFLWSLKKLNH LEDE FN
Sbjct: 84  IGGLNELESSLNKCTIPLTSSLVTQVIDSFKNEVHTRRLLRFFLWSLKKLNHDLEDEAFN 143

Query: 121 NAIRFFAQKKDYTAINILLSNLKKADRAMDGQTFSFVAEAFVKMNRDDEALGLFKNLEKY 180
            AIRFFAQKKDYTAI+ILLSNLKKA+RAMDGQTF FVAEA VKM+R+DEALGLFKNL+KY
Sbjct: 144 YAIRFFAQKKDYTAIDILLSNLKKANRAMDGQTFGFVAEALVKMDREDEALGLFKNLDKY 203

Query: 181 KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA 240
           KCPHDQFTV AIITALC+KGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA
Sbjct: 204 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA 263

Query: 241 RRILKEMKSDGTMPDLFSYNTFLKCLCEKNVEKNPSGLVPEALNVMMEMRSYKIAPNSIS 300
           RRILKEMKSDGTMPDLF YNTFLKCLCE+N+ KNPSGLVPEALNVMMEMRSY+IAPNSIS
Sbjct: 264 RRILKEMKSDGTMPDLFCYNTFLKCLCEQNLAKNPSGLVPEALNVMMEMRSYRIAPNSIS 323

Query: 301 YNILLSCLCKTRRVKESCRILEMMKRSGCRPDCVSYYLVARVLFLTGRFGKGREIVDEMI 360
           YNILLSCL +TRRVKESC IL+ MKRSGC+P+CVSYYLVARVLFLTGRFGKGR IVDEMI
Sbjct: 324 YNILLSCLGRTRRVKESCTILKTMKRSGCQPNCVSYYLVARVLFLTGRFGKGRGIVDEMI 383

Query: 361 EEGLTPDRKFYYELIGILCGVERTNYAVELFEKMKRSSLGGYGPVYDVLIPKVCRGGDFE 420
           EEGL PDRKFYY+LIG+LCGVERTNYA+ELFEKMKRSSLGGYGPVYDVLIPK+CRGGDFE
Sbjct: 384 EEGLIPDRKFYYDLIGVLCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE 443

Query: 421 MGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEECNTAEKQNKAAAEKPN 480
            GRQLWEEAMAMGV L+CSSE+LDPSITKVFKPTRKIENKI+EECN AEKQNKAA EKP 
Sbjct: 444 KGRQLWEEAMAMGVVLSCSSEVLDPSITKVFKPTRKIENKILEECNRAEKQNKAATEKPK 503

Query: 481 KKRKKGK 488
           +KRKK K
Sbjct: 504 EKRKKSK 510

[Close]

BLAST of Cmc02g0056791 vs. NCBI nr
Match: XP_022987424.1 (pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Cucurbita maxima])

HSP 1 Score: 851.7 bits (2199), Expect = 3.2e-243
Identity = 416/487 (85.42%), Postives = 450/487 (92.40%), Query Frame = 0


Query: 1   MHARHLFDEMPLRRCVSLLKLKWDSFIAQSVYTQHRFCSLHSTVNNGAAVSKLCEVISCT 60
           MHARH+FDEM LRRCVSLLKLKWDSF  QSV TQHRFCSLHSTV NGA+VSKLCEV+SCT
Sbjct: 8   MHARHMFDEMSLRRCVSLLKLKWDSFFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCT 67

Query: 61  IGGLDELESSLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN 120
           IGGLDELE++LNKCT+SLTSSLVTQVIDS KNEAP RRLLRFF WSLKKLNH LEDEDFN
Sbjct: 68  IGGLDELEATLNKCTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHHLEDEDFN 127

Query: 121 NAIRFFAQKKDYTAINILLSNLKKADRAMDGQTFSFVAEAFVKMNRDDEALGLFKNLEKY 180
            AIR FAQKKDYTAI+ILLS+LKKA RAMDGQTF  VAEA VKM+R+DEALGLFKNL+KY
Sbjct: 128 YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY 187

Query: 181 KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA 240
           KCPHDQFTV AIITALC+KGHAKRAEGVVLHHKDKIS TMSCIYRSLLYGWSI+KNTKEA
Sbjct: 188 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA 247

Query: 241 RRILKEMKSDGTMPDLFSYNTFLKCLCEKNVEKNPSGLVPEALNVMMEMRSYKIAPNSIS 300
           RRILKEMKSDGTMPDLFSYNTFL+CLCE+N++KNPSGLVPEALNVMMEMRSY IAPNSIS
Sbjct: 248 RRILKEMKSDGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS 307

Query: 301 YNILLSCLCKTRRVKESCRILEMMKRSGCRPDCVSYYLVARVLFLTGRFGKGREIVDEMI 360
           YNILLSCL + RRVKESCRILE MKR+GCRPDC+SYYLVARVLFL+GRFGKG  IV+EMI
Sbjct: 308 YNILLSCLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGCRIVEEMI 367

Query: 361 EEGLTPDRKFYYELIGILCGVERTNYAVELFEKMKRSSLGGYGPVYDVLIPKVCRGGDFE 420
           EEGL PDRKFYY+LIGILCGVER  YA+ELFEKMKRSSLGGYGPVYDVLIPK+C GGDFE
Sbjct: 368 EEGLIPDRKFYYDLIGILCGVEREKYALELFEKMKRSSLGGYGPVYDVLIPKLCSGGDFE 427

Query: 421 MGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEECNTAEKQNKAAAEKPN 480
           MGRQLW EAMAMG++L CSS++LDPSITKVFKPTRKI+N+ +EECN AEKQNKAA +K  
Sbjct: 428 MGRQLWGEAMAMGITLRCSSDVLDPSITKVFKPTRKIDNQNLEECNRAEKQNKAATDKSK 487

Query: 481 KKRKKGK 488
            + KK K
Sbjct: 488 ARGKKSK 494

[Close]

BLAST of Cmc02g0056791 vs. ExPASy Swiss-Prot
Match: Q9FLJ6 (Pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g61370 PE=2 SV=1)

HSP 1 Score: 563.1 bits (1450), Expect = 3.0e-159
Identity = 271/478 (56.69%), Postives = 362/478 (75.73%), Query Frame = 0


Query: 19  LKLKWDSFIAQSVYTQHRFCSLHSTVNNGAAVSKLCEVISCTIGGLDELESSLNKCTISL 78
           ++L   +++  +      FCS H    +  A+ ++  ++S  +GGLD+LE +LN+ ++S 
Sbjct: 6   VRLNRFTYLTSTAKLTRYFCSHHLVDRSETALHEVIRIVSSPVGGLDDLEENLNQVSVSP 65

Query: 79  TSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFNNAIRFFAQKKDYTAINIL 138
           +S+LVTQVI+S KNE   RRLLRFF WS K L  +L D++FN  +R  A+KKD+TA+ IL
Sbjct: 66  SSNLVTQVIESCKNETSPRRLLRFFSWSCKSLGSSLHDKEFNYVLRVLAEKKDHTAMQIL 125

Query: 139 LSNLKKADRAMDGQTFSFVAEAFVKMNRDDEALGLFKNLEKYKCPHDQFTVVAIITALCS 198
           LS+L+K +RAMD QTFS VAE  VK+ ++++A+G+FK L+K+ CP D FTV AII+ALCS
Sbjct: 126 LSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCS 185

Query: 199 KGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRILKEMKSDGTMPDLFS 258
           +GH KRA GV+ HHKD IS     +YRSLL+GWS+++N KEARR++++MKS G  PDLF 
Sbjct: 186 RGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFC 245

Query: 259 YNTFLKCLCEKNVEKNPSGLVPEALNVMMEMRSYKIAPNSISYNILLSCLCKTRRVKESC 318
           +N+ L CLCE+NV +NPSGLVPEALN+M+EMRSYKI P S+SYNILLSCL +TRRV+ESC
Sbjct: 246 FNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESC 305

Query: 319 RILEMMKRSGCRPDCVSYYLVARVLFLTGRFGKGREIVDEMIEEGLTPDRKFYYELIGIL 378
           +ILE MKRSGC PD  SYY V RVL+LTGRFGKG +IVDEMIE G  P+RKFYY+LIG+L
Sbjct: 306 QILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVL 365

Query: 379 CGVERTNYAVELFEKMKRSSLGGYGPVYDVLIPKVCRGGDFEMGRQLWEEAMAMGVSLNC 438
           CGVER N+A++LFEKMKRSS+GGYG VYD+LIPK+C+GG+FE GR+LWEEA+++ V+L+C
Sbjct: 366 CGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEALSIDVTLSC 425

Query: 439 SSEILDPSITKVFKP-----------TRKIENKIVEECNTAEKQNKAAAEKPNKKRKK 486
           S  +LDPS+T+VFKP            R +  KI    N  + + K   ++ +K +KK
Sbjct: 426 SISLLDPSVTEVFKPMKMKEEAAMVDRRALNLKIHARMNKTKPKLKLKPKRRSKTKKK 483

[Close]

BLAST of Cmc02g0056791 vs. ExPASy Swiss-Prot
Match: Q9FME4 (Pentatricopeptide repeat-containing protein PNM1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PNM1 PE=1 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.3e-42
Identity = 115/415 (27.71%), Postives = 203/415 (48.92%), Query Frame = 0


Query: 76  ISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFNNAIRFFAQKKDYTAI 135
           I+    L+ Q ++ S      R  L F  W     N +  DE  +  + +F ++KD+   
Sbjct: 105 ITPNPDLILQTLNLSPEAG--RAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDFKG- 164

Query: 136 NILLSNLKKADRAMDGQTFSFVAEAFVKMNRDDEALGLFKNLEK-YKCPHDQFTVVAIIT 195
             +L  + K      G+T     +  V+  R  +    F+ +E  Y    D+ ++  ++ 
Sbjct: 165 --MLEIISKYKGIAGGKTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVK 224

Query: 196 ALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRILKEMKSDGTMP 255
            LC KGHA  AE +V +  ++I    + I   L+ GW I +   EA R+  EM   G   
Sbjct: 225 KLCEKGHASIAEKMVKNTANEIFPDEN-ICDLLISGWCIAEKLDEATRLAGEMSRGGFEI 284

Query: 256 DLFSYNTFLKCLCEKNVEKNPSGLVPEALNVMMEMRSYKIAPNSISYNILLSCLCKTRRV 315
              +YN  L C+C+   +K+P  L PE   V++EM    +  N+ ++N+L++ LCK RR 
Sbjct: 285 GTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRT 344

Query: 316 KESCRILEMMKRSGCRPDCVSYYLVARVLFLTGRFGKGREIVDEMIEEGLTP--DRKFYY 375
           +E+  +   M   GC+PD  +Y ++ R L+   R G+G E++D+M   G     ++K YY
Sbjct: 345 EEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYY 404

Query: 376 ELIGILCGVERTNYAVELFEKMKRSSLGGYGPVYDVLIPKVCRGGDFEMGRQLWEEAMAM 435
             + ILCG+ER  +A+ +F+ MK +        YD+L+ K+C          L++EA   
Sbjct: 405 GFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKK 464

Query: 436 GVSLNCSSEILDPSITKVFKPTRKIENKIVEECNTAEKQNKAAAEKPNKKRKKGK 488
           G++++     +DP   K  K T+++++ +        K+ +   EK  +K+K+ K
Sbjct: 465 GIAVSPKEYRVDPRFMK--KKTKEVDSNV--------KKRETLPEKTARKKKRLK 503

[Close]

BLAST of Cmc02g0056791 vs. ExPASy Swiss-Prot
Match: Q9FH87 (Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis thaliana OX=3702 GN=At5g65820 PE=3 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 9.0e-31
Identity = 86/371 (23.18%), Postives = 174/371 (46.90%), Query Frame = 0


Query: 66  ELESSLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFNNAIRF 125
           +LE +LN+  + L   L+ +V++   +        RFF+W+ K+  +    E + + ++ 
Sbjct: 99  KLELALNESGVELRPGLIERVLNRCGDAGNLG--YRFFVWAAKQPRYCHSIEVYKSMVKI 158

Query: 126 FAQKKDYTAINILLSNLKKAD-RAMDGQTFSFVAEAFVKMNRDDEALGLFKNLEKYKCPH 185
            ++ + + A+  L+  ++K + + ++ + F  + + F   +   +A+ +   + K+    
Sbjct: 159 LSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEP 218

Query: 186 DQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRIL 245
           D++    ++ ALC  G  K A  +    + +    +   + SLLYGW       EA+ +L
Sbjct: 219 DEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLR-YFTSLLYGWCRVGKMMEAKYVL 278

Query: 246 KEMKSDGTMPDLFSYNTFLKCLCEKNVEKNPSGLVPEALNVMMEMRSYKIAPNSISYNIL 305
            +M   G  PD+  Y   L            +G + +A +++ +MR     PN+  Y +L
Sbjct: 279 VQMNEAGFEPDIVDYTNLLSGYAN-------AGKMADAYDLLRDMRRRGFEPNANCYTVL 338

Query: 306 LSCLCKTRRVKESCRILEMMKRSGCRPDCVSYYLVARVLFLTGRFGKGREIVDEMIEEGL 365
           +  LCK  R++E+ ++   M+R  C  D V+Y  +       G+  K   ++D+MI++GL
Sbjct: 339 IQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGL 398

Query: 366 TPDRKFYYELIGILCGVERTNYAVELFEKMKRSSLGGYGPVYDVLIPKVCRGGDFEMGRQ 425
            P    Y  ++      E     +EL EKM++        +Y+V+I   C+ G+ +   +
Sbjct: 399 MPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVR 458

Query: 426 LWEEAMAMGVS 436
           LW E    G+S
Sbjct: 459 LWNEMEENGLS 459

[Close]

BLAST of Cmc02g0056791 vs. ExPASy Swiss-Prot
Match: Q9SR00 (Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g04760 PE=2 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 2.3e-26
Identity = 83/311 (26.69%), Postives = 140/311 (45.02%), Query Frame = 0


Query: 139 LSNLKKADRAMD-----GQ----TFSFVAEAFVKMNRDDEALGLFKNLEKYKCPHDQFTV 198
           L N+ KA R M+     GQ     ++ +   F KMNR D+A  +   +       D  T 
Sbjct: 137 LRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTY 196

Query: 199 VAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRILKEMKS 258
             +I +LCS+G    A  V+              Y  L+    ++    EA +++ EM S
Sbjct: 197 NIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLS 256

Query: 259 DGTMPDLFSYNTFLKCLCEKNVEKNPSGLVPEALNVMMEMRSYKIAPNSISYNILLSCLC 318
            G  PD+F+YNT ++ +C++       G+V  A  ++  +      P+ ISYNILL  L 
Sbjct: 257 RGLKPDMFTYNTIIRGMCKE-------GMVDRAFEMVRNLELKGCEPDVISYNILLRALL 316

Query: 319 KTRRVKESCRILEMMKRSGCRPDCVSYYLVARVLFLTGRFGKGREIVDEMIEEGLTPDRK 378
              + +E  +++  M    C P+ V+Y ++   L   G+  +   ++  M E+GLTPD  
Sbjct: 317 NQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAY 376

Query: 379 FYYELIGILCGVERTNYAVELFEKMKRSSLGGYGPVYDVLIPKVCRGGDFEMGRQLWEEA 438
            Y  LI   C   R + A+E  E M           Y+ ++  +C+ G  +   +++ + 
Sbjct: 377 SYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL 436

Query: 439 MAMGVSLNCSS 441
             +G S N SS
Sbjct: 437 GEVGCSPNSSS 440

[Close]

BLAST of Cmc02g0056791 vs. ExPASy Swiss-Prot
Match: Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 3.0e-26
Identity = 77/321 (23.99%), Postives = 149/321 (46.42%), Query Frame = 0


Query: 119 FNNAIRFFAQKKDYTAINILLSNLKKADRAMDGQTFSFVAEAFVKMNRDDEALGLFKNLE 178
           FN  I+   +        ++L ++       D +TF+ V + +++    D AL + + + 
Sbjct: 192 FNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMV 251

Query: 179 KYKCPHDQFTVVAIITALCSKGHAKRAEGVV--LHHKDKISSTMSCIYRSLLYGWSIKKN 238
           ++ C     +V  I+   C +G  + A   +  + ++D         + +L+ G     +
Sbjct: 252 EFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD-QYTFNTLVNGLCKAGH 311

Query: 239 TKEARRILKEMKSDGTMPDLFSYNTFLKCLCEKNVEKNPSGLVPEALNVMMEMRSYKIAP 298
            K A  I+  M  +G  PD+++YN+ +  LC+        G V EA+ V+ +M +   +P
Sbjct: 312 VKHAIEIMDVMLQEGYDPDVYTYNSVISGLCK-------LGEVKEAVEVLDQMITRDCSP 371

Query: 299 NSISYNILLSCLCKTRRVKESCRILEMMKRSGCRPDCVSYYLVARVLFLTGRFGKGREIV 358
           N+++YN L+S LCK  +V+E+  +  ++   G  PD  ++  + + L LT       E+ 
Sbjct: 372 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 431

Query: 359 DEMIEEGLTPDRKFYYELIGILCGVERTNYAVELFEKMKRSSLGGYGPVYDVLIPKVCRG 418
           +EM  +G  PD   Y  LI  LC   + + A+ + ++M+ S        Y+ LI   C+ 
Sbjct: 432 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA 491

Query: 419 GDFEMGRQLWEEAMAMGVSLN 438
                  ++++E    GVS N
Sbjct: 492 NKTREAEEIFDEMEVHGVSRN 504

[Close]

BLAST of Cmc02g0056791 vs. ExPASy TrEMBL
Match: A0A5A7US52 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002610 PE=4 SV=1)

HSP 1 Score: 972.6 bits (2513), Expect = 6.0e-280
Identity = 483/486 (99.38%), Postives = 485/486 (99.79%), Query Frame = 0


Query: 1   MHARHLFDEMPLRRCVSLLKLKWDSFIAQSVYTQHRFCSLHSTVNNGAAVSKLCEVISCT 60
           MHARH+FDEMPLRRCVSLLKLKWDSFIAQSV TQHRFCSLHSTVNNGAAVSKLCEVISCT
Sbjct: 1   MHARHMFDEMPLRRCVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCT 60

Query: 61  IGGLDELESSLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN 120
           IGGLDELESSLN+CTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN
Sbjct: 61  IGGLDELESSLNQCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN 120

Query: 121 NAIRFFAQKKDYTAINILLSNLKKADRAMDGQTFSFVAEAFVKMNRDDEALGLFKNLEKY 180
           NAIRFFAQKKDYTAINILLSNLKKADRAMDGQTFSFVAEAFVKMNRDDEALGLFKNLEKY
Sbjct: 121 NAIRFFAQKKDYTAINILLSNLKKADRAMDGQTFSFVAEAFVKMNRDDEALGLFKNLEKY 180

Query: 181 KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA 240
           KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA
Sbjct: 181 KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA 240

Query: 241 RRILKEMKSDGTMPDLFSYNTFLKCLCEKNVEKNPSGLVPEALNVMMEMRSYKIAPNSIS 300
           RRILKEMKSDGTMPDLFSYNTFLKCLCEKNVEKNPSGLVPEALNVMMEMRSYKIAPNSIS
Sbjct: 241 RRILKEMKSDGTMPDLFSYNTFLKCLCEKNVEKNPSGLVPEALNVMMEMRSYKIAPNSIS 300

Query: 301 YNILLSCLCKTRRVKESCRILEMMKRSGCRPDCVSYYLVARVLFLTGRFGKGREIVDEMI 360
           YNILLSCLCKTRRVKESCRILEMMKRSGCRPDCVSYYLVARVLFLTGRFGKGREIVDEMI
Sbjct: 301 YNILLSCLCKTRRVKESCRILEMMKRSGCRPDCVSYYLVARVLFLTGRFGKGREIVDEMI 360

Query: 361 EEGLTPDRKFYYELIGILCGVERTNYAVELFEKMKRSSLGGYGPVYDVLIPKVCRGGDFE 420
           EEGLTPDRKFYYELIGILCGVERTNYAVELFEKMKRSSLGGYGPVYDVLIPKVCRGGDFE
Sbjct: 361 EEGLTPDRKFYYELIGILCGVERTNYAVELFEKMKRSSLGGYGPVYDVLIPKVCRGGDFE 420

Query: 421 MGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEECNTAEKQNKAAAEKPN 480
           MGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEECNTAEKQNKAAAEKPN
Sbjct: 421 MGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEECNTAEKQNKAAAEKPN 480

Query: 481 KKRKKG 487
           KKRKKG
Sbjct: 481 KKRKKG 486

[Close]

BLAST of Cmc02g0056791 vs. ExPASy TrEMBL
Match: A0A1S3BV55 (pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494008 PE=4 SV=1)

HSP 1 Score: 972.6 bits (2513), Expect = 6.0e-280
Identity = 483/486 (99.38%), Postives = 485/486 (99.79%), Query Frame = 0


Query: 1   MHARHLFDEMPLRRCVSLLKLKWDSFIAQSVYTQHRFCSLHSTVNNGAAVSKLCEVISCT 60
           MHARH+FDEMPLRRCVSLLKLKWDSFIAQSV TQHRFCSLHSTVNNGAAVSKLCEVISCT
Sbjct: 1   MHARHMFDEMPLRRCVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCT 60

Query: 61  IGGLDELESSLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN 120
           IGGLDELESSLN+CTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN
Sbjct: 61  IGGLDELESSLNQCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN 120

Query: 121 NAIRFFAQKKDYTAINILLSNLKKADRAMDGQTFSFVAEAFVKMNRDDEALGLFKNLEKY 180
           NAIRFFAQKKDYTAINILLSNLKKADRAMDGQTFSFVAEAFVKMNRDDEALGLFKNLEKY
Sbjct: 121 NAIRFFAQKKDYTAINILLSNLKKADRAMDGQTFSFVAEAFVKMNRDDEALGLFKNLEKY 180

Query: 181 KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA 240
           KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA
Sbjct: 181 KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA 240

Query: 241 RRILKEMKSDGTMPDLFSYNTFLKCLCEKNVEKNPSGLVPEALNVMMEMRSYKIAPNSIS 300
           RRILKEMKSDGTMPDLFSYNTFLKCLCEKNVEKNPSGLVPEALNVMMEMRSYKIAPNSIS
Sbjct: 241 RRILKEMKSDGTMPDLFSYNTFLKCLCEKNVEKNPSGLVPEALNVMMEMRSYKIAPNSIS 300

Query: 301 YNILLSCLCKTRRVKESCRILEMMKRSGCRPDCVSYYLVARVLFLTGRFGKGREIVDEMI 360
           YNILLSCLCKTRRVKESCRILEMMKRSGCRPDCVSYYLVARVLFLTGRFGKGREIVDEMI
Sbjct: 301 YNILLSCLCKTRRVKESCRILEMMKRSGCRPDCVSYYLVARVLFLTGRFGKGREIVDEMI 360

Query: 361 EEGLTPDRKFYYELIGILCGVERTNYAVELFEKMKRSSLGGYGPVYDVLIPKVCRGGDFE 420
           EEGLTPDRKFYYELIGILCGVERTNYAVELFEKMKRSSLGGYGPVYDVLIPKVCRGGDFE
Sbjct: 361 EEGLTPDRKFYYELIGILCGVERTNYAVELFEKMKRSSLGGYGPVYDVLIPKVCRGGDFE 420

Query: 421 MGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEECNTAEKQNKAAAEKPN 480
           MGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEECNTAEKQNKAAAEKPN
Sbjct: 421 MGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEECNTAEKQNKAAAEKPN 480

Query: 481 KKRKKG 487
           KKRKKG
Sbjct: 481 KKRKKG 486

[Close]

BLAST of Cmc02g0056791 vs. ExPASy TrEMBL
Match: A0A0A0LPF4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G009920 PE=4 SV=1)

HSP 1 Score: 943.7 bits (2438), Expect = 3.0e-271
Identity = 466/487 (95.69%), Postives = 481/487 (98.77%), Query Frame = 0


Query: 1   MHARHLFDEMPLRRCVSLLKLKWDSFIAQSVYTQHRFCSLHSTVNNGAAVSKLCEVISCT 60
           MHARHLFDEM LRRCVSLLKLKWDSFIAQSV TQHRFCSLHSTVNNGAAVSKLCEVISCT
Sbjct: 1   MHARHLFDEMSLRRCVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCT 60

Query: 61  IGGLDELESSLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN 120
           IGGLDELESSLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN
Sbjct: 61  IGGLDELESSLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN 120

Query: 121 NAIRFFAQKKDYTAINILLSNLKKADRAMDGQTFSFVAEAFVKMNRDDEALGLFKNLEKY 180
           NAIRFFAQKKDYTA+NILLSNLKKADRAMDGQTF FVAEAFVKM+R+DEALGLFKNLEKY
Sbjct: 121 NAIRFFAQKKDYTAVNILLSNLKKADRAMDGQTFGFVAEAFVKMDREDEALGLFKNLEKY 180

Query: 181 KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA 240
           KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA
Sbjct: 181 KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA 240

Query: 241 RRILKEMKSDGTMPDLFSYNTFLKCLCEKNVEKNPSGLVPEALNVMMEMRSYKIAPNSIS 300
           RRILKEMKSDGTMPDLF YNTFLKCLCEKNVEKNPSGLVPE+LNVMMEMRSYKI+PNSIS
Sbjct: 241 RRILKEMKSDGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKISPNSIS 300

Query: 301 YNILLSCLCKTRRVKESCRILEMMKRSGCRPDCVSYYLVARVLFLTGRFGKGREIVDEMI 360
           YNILLSCLCKTRRVKESC+ILEMMKR+GC+PDCVSYYL+ARVLFLTGRFGKGREIVDEMI
Sbjct: 301 YNILLSCLCKTRRVKESCKILEMMKRTGCQPDCVSYYLMARVLFLTGRFGKGREIVDEMI 360

Query: 361 EEGLTPDRKFYYELIGILCGVERTNYAVELFEKMKRSSLGGYGPVYDVLIPKVCRGGDFE 420
           EEGLTPDRKFYY+LIGILCGVERTNYA+ELFEKMKRSSLGGYGPVYDVLIPK+CRGG+FE
Sbjct: 361 EEGLTPDRKFYYDLIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFE 420

Query: 421 MGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEECNTAEKQNKAAAEKPN 480
           MGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEE N+AEKQNKAAAEKP 
Sbjct: 421 MGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEEFNSAEKQNKAAAEKPK 480

Query: 481 KKRKKGK 488
           +KRKKGK
Sbjct: 481 EKRKKGK 487

[Close]

BLAST of Cmc02g0056791 vs. ExPASy TrEMBL
Match: A0A6J1JIV3 (pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111484976 PE=4 SV=1)

HSP 1 Score: 851.7 bits (2199), Expect = 1.5e-243
Identity = 416/487 (85.42%), Postives = 450/487 (92.40%), Query Frame = 0


Query: 1   MHARHLFDEMPLRRCVSLLKLKWDSFIAQSVYTQHRFCSLHSTVNNGAAVSKLCEVISCT 60
           MHARH+FDEM LRRCVSLLKLKWDSF  QSV TQHRFCSLHSTV NGA+VSKLCEV+SCT
Sbjct: 8   MHARHMFDEMSLRRCVSLLKLKWDSFFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCT 67

Query: 61  IGGLDELESSLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN 120
           IGGLDELE++LNKCT+SLTSSLVTQVIDS KNEAP RRLLRFF WSLKKLNH LEDEDFN
Sbjct: 68  IGGLDELEATLNKCTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHHLEDEDFN 127

Query: 121 NAIRFFAQKKDYTAINILLSNLKKADRAMDGQTFSFVAEAFVKMNRDDEALGLFKNLEKY 180
            AIR FAQKKDYTAI+ILLS+LKKA RAMDGQTF  VAEA VKM+R+DEALGLFKNL+KY
Sbjct: 128 YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY 187

Query: 181 KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA 240
           KCPHDQFTV AIITALC+KGHAKRAEGVVLHHKDKIS TMSCIYRSLLYGWSI+KNTKEA
Sbjct: 188 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA 247

Query: 241 RRILKEMKSDGTMPDLFSYNTFLKCLCEKNVEKNPSGLVPEALNVMMEMRSYKIAPNSIS 300
           RRILKEMKSDGTMPDLFSYNTFL+CLCE+N++KNPSGLVPEALNVMMEMRSY IAPNSIS
Sbjct: 248 RRILKEMKSDGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS 307

Query: 301 YNILLSCLCKTRRVKESCRILEMMKRSGCRPDCVSYYLVARVLFLTGRFGKGREIVDEMI 360
           YNILLSCL + RRVKESCRILE MKR+GCRPDC+SYYLVARVLFL+GRFGKG  IV+EMI
Sbjct: 308 YNILLSCLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGCRIVEEMI 367

Query: 361 EEGLTPDRKFYYELIGILCGVERTNYAVELFEKMKRSSLGGYGPVYDVLIPKVCRGGDFE 420
           EEGL PDRKFYY+LIGILCGVER  YA+ELFEKMKRSSLGGYGPVYDVLIPK+C GGDFE
Sbjct: 368 EEGLIPDRKFYYDLIGILCGVEREKYALELFEKMKRSSLGGYGPVYDVLIPKLCSGGDFE 427

Query: 421 MGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEECNTAEKQNKAAAEKPN 480
           MGRQLW EAMAMG++L CSS++LDPSITKVFKPTRKI+N+ +EECN AEKQNKAA +K  
Sbjct: 428 MGRQLWGEAMAMGITLRCSSDVLDPSITKVFKPTRKIDNQNLEECNRAEKQNKAATDKSK 487

Query: 481 KKRKKGK 488
            + KK K
Sbjct: 488 ARGKKSK 494

[Close]

BLAST of Cmc02g0056791 vs. ExPASy TrEMBL
Match: A0A6J1E1S0 (pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111429800 PE=4 SV=1)

HSP 1 Score: 827.0 bits (2135), Expect = 4.1e-236
Identity = 407/487 (83.57%), Postives = 444/487 (91.17%), Query Frame = 0


Query: 1   MHARHLFDEMPLRRCVSLLKLKWDSFIAQSVYTQHRFCSLHSTVNNGAAVSKLCEVISCT 60
           M+AR +FDE  LRRCVSLLKLKWD    QSV TQHRFCSLHSTV NGA+VSKLCEV+SCT
Sbjct: 8   MNARQMFDERSLRRCVSLLKLKWDCLFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCT 67

Query: 61  IGGLDELESSLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN 120
           IGGLDELE++LNK T+SLTSSLVTQVIDS KNEAP RRLLRFF WSLKKLNH LEDEDFN
Sbjct: 68  IGGLDELEATLNKSTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN 127

Query: 121 NAIRFFAQKKDYTAINILLSNLKKADRAMDGQTFSFVAEAFVKMNRDDEALGLFKNLEKY 180
            AIR FAQKKDYTAI+ILLS+LKKA RAMDGQTF  VAEA VKM+R+DEALGLFKNL+KY
Sbjct: 128 YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY 187

Query: 181 KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA 240
           KCPHDQFTV AIITALC+KGHAKRAEGVVLHHKDKIS TMSCIYRSLLYGWSI+KNTKEA
Sbjct: 188 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA 247

Query: 241 RRILKEMKSDGTMPDLFSYNTFLKCLCEKNVEKNPSGLVPEALNVMMEMRSYKIAPNSIS 300
           RRILKEMKSDGTMPDLFSYNTFL+CL E+N++KNPSGLVPEALNVMMEMRSY IAPNSIS
Sbjct: 248 RRILKEMKSDGTMPDLFSYNTFLRCLSEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS 307

Query: 301 YNILLSCLCKTRRVKESCRILEMMKRSGCRPDCVSYYLVARVLFLTGRFGKGREIVDEMI 360
           YNILLSCL + RRVKESCRILE MKR+GCRPDC+SYYLVARVLFL+GRFGKG  IV+EMI
Sbjct: 308 YNILLSCLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGCRIVEEMI 367

Query: 361 EEGLTPDRKFYYELIGILCGVERTNYAVELFEKMKRSSLGGYGPVYDVLIPKVCRGGDFE 420
           EEGL PDRKFYY+LIGILCGVE   YA+ELFEKMKRSSLGGYGPVYDVLIPK+CRGGDFE
Sbjct: 368 EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE 427

Query: 421 MGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEECNTAEKQNKAAAEKPN 480
           MGRQLWEEAMAMG++L CSS++LDPSITKVFKPTRKI+N+ +EE + AEKQNKAA +K  
Sbjct: 428 MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEESSRAEKQNKAATDKSK 487

Query: 481 KKRKKGK 488
            + K+ K
Sbjct: 488 ARGKRSK 494

[Close]

BLAST of Cmc02g0056791 vs. TAIR 10
Match: AT5G61370.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 563.1 bits (1450), Expect = 2.1e-160
Identity = 271/478 (56.69%), Postives = 362/478 (75.73%), Query Frame = 0


Query: 19  LKLKWDSFIAQSVYTQHRFCSLHSTVNNGAAVSKLCEVISCTIGGLDELESSLNKCTISL 78
           ++L   +++  +      FCS H    +  A+ ++  ++S  +GGLD+LE +LN+ ++S 
Sbjct: 6   VRLNRFTYLTSTAKLTRYFCSHHLVDRSETALHEVIRIVSSPVGGLDDLEENLNQVSVSP 65

Query: 79  TSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFNNAIRFFAQKKDYTAINIL 138
           +S+LVTQVI+S KNE   RRLLRFF WS K L  +L D++FN  +R  A+KKD+TA+ IL
Sbjct: 66  SSNLVTQVIESCKNETSPRRLLRFFSWSCKSLGSSLHDKEFNYVLRVLAEKKDHTAMQIL 125

Query: 139 LSNLKKADRAMDGQTFSFVAEAFVKMNRDDEALGLFKNLEKYKCPHDQFTVVAIITALCS 198
           LS+L+K +RAMD QTFS VAE  VK+ ++++A+G+FK L+K+ CP D FTV AII+ALCS
Sbjct: 126 LSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCS 185

Query: 199 KGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRILKEMKSDGTMPDLFS 258
           +GH KRA GV+ HHKD IS     +YRSLL+GWS+++N KEARR++++MKS G  PDLF 
Sbjct: 186 RGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFC 245

Query: 259 YNTFLKCLCEKNVEKNPSGLVPEALNVMMEMRSYKIAPNSISYNILLSCLCKTRRVKESC 318
           +N+ L CLCE+NV +NPSGLVPEALN+M+EMRSYKI P S+SYNILLSCL +TRRV+ESC
Sbjct: 246 FNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESC 305

Query: 319 RILEMMKRSGCRPDCVSYYLVARVLFLTGRFGKGREIVDEMIEEGLTPDRKFYYELIGIL 378
           +ILE MKRSGC PD  SYY V RVL+LTGRFGKG +IVDEMIE G  P+RKFYY+LIG+L
Sbjct: 306 QILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVL 365

Query: 379 CGVERTNYAVELFEKMKRSSLGGYGPVYDVLIPKVCRGGDFEMGRQLWEEAMAMGVSLNC 438
           CGVER N+A++LFEKMKRSS+GGYG VYD+LIPK+C+GG+FE GR+LWEEA+++ V+L+C
Sbjct: 366 CGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEALSIDVTLSC 425

Query: 439 SSEILDPSITKVFKP-----------TRKIENKIVEECNTAEKQNKAAAEKPNKKRKK 486
           S  +LDPS+T+VFKP            R +  KI    N  + + K   ++ +K +KK
Sbjct: 426 SISLLDPSVTEVFKPMKMKEEAAMVDRRALNLKIHARMNKTKPKLKLKPKRRSKTKKK 483

[Close]

BLAST of Cmc02g0056791 vs. TAIR 10
Match: AT5G60960.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 175.6 bits (444), Expect = 9.5e-44
Identity = 115/415 (27.71%), Postives = 203/415 (48.92%), Query Frame = 0


Query: 76  ISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFNNAIRFFAQKKDYTAI 135
           I+    L+ Q ++ S      R  L F  W     N +  DE  +  + +F ++KD+   
Sbjct: 105 ITPNPDLILQTLNLSPEAG--RAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDFKG- 164

Query: 136 NILLSNLKKADRAMDGQTFSFVAEAFVKMNRDDEALGLFKNLEK-YKCPHDQFTVVAIIT 195
             +L  + K      G+T     +  V+  R  +    F+ +E  Y    D+ ++  ++ 
Sbjct: 165 --MLEIISKYKGIAGGKTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVK 224

Query: 196 ALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRILKEMKSDGTMP 255
            LC KGHA  AE +V +  ++I    + I   L+ GW I +   EA R+  EM   G   
Sbjct: 225 KLCEKGHASIAEKMVKNTANEIFPDEN-ICDLLISGWCIAEKLDEATRLAGEMSRGGFEI 284

Query: 256 DLFSYNTFLKCLCEKNVEKNPSGLVPEALNVMMEMRSYKIAPNSISYNILLSCLCKTRRV 315
              +YN  L C+C+   +K+P  L PE   V++EM    +  N+ ++N+L++ LCK RR 
Sbjct: 285 GTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRT 344

Query: 316 KESCRILEMMKRSGCRPDCVSYYLVARVLFLTGRFGKGREIVDEMIEEGLTP--DRKFYY 375
           +E+  +   M   GC+PD  +Y ++ R L+   R G+G E++D+M   G     ++K YY
Sbjct: 345 EEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYY 404

Query: 376 ELIGILCGVERTNYAVELFEKMKRSSLGGYGPVYDVLIPKVCRGGDFEMGRQLWEEAMAM 435
             + ILCG+ER  +A+ +F+ MK +        YD+L+ K+C          L++EA   
Sbjct: 405 GFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKK 464

Query: 436 GVSLNCSSEILDPSITKVFKPTRKIENKIVEECNTAEKQNKAAAEKPNKKRKKGK 488
           G++++     +DP   K  K T+++++ +        K+ +   EK  +K+K+ K
Sbjct: 465 GIAVSPKEYRVDPRFMK--KKTKEVDSNV--------KKRETLPEKTARKKKRLK 503

[Close]

BLAST of Cmc02g0056791 vs. TAIR 10
Match: AT5G65820.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 136.3 bits (342), Expect = 6.4e-32
Identity = 86/371 (23.18%), Postives = 174/371 (46.90%), Query Frame = 0


Query: 66  ELESSLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFNNAIRF 125
           +LE +LN+  + L   L+ +V++   +        RFF+W+ K+  +    E + + ++ 
Sbjct: 99  KLELALNESGVELRPGLIERVLNRCGDAGNLG--YRFFVWAAKQPRYCHSIEVYKSMVKI 158

Query: 126 FAQKKDYTAINILLSNLKKAD-RAMDGQTFSFVAEAFVKMNRDDEALGLFKNLEKYKCPH 185
            ++ + + A+  L+  ++K + + ++ + F  + + F   +   +A+ +   + K+    
Sbjct: 159 LSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEP 218

Query: 186 DQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRIL 245
           D++    ++ ALC  G  K A  +    + +    +   + SLLYGW       EA+ +L
Sbjct: 219 DEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLR-YFTSLLYGWCRVGKMMEAKYVL 278

Query: 246 KEMKSDGTMPDLFSYNTFLKCLCEKNVEKNPSGLVPEALNVMMEMRSYKIAPNSISYNIL 305
            +M   G  PD+  Y   L            +G + +A +++ +MR     PN+  Y +L
Sbjct: 279 VQMNEAGFEPDIVDYTNLLSGYAN-------AGKMADAYDLLRDMRRRGFEPNANCYTVL 338

Query: 306 LSCLCKTRRVKESCRILEMMKRSGCRPDCVSYYLVARVLFLTGRFGKGREIVDEMIEEGL 365
           +  LCK  R++E+ ++   M+R  C  D V+Y  +       G+  K   ++D+MI++GL
Sbjct: 339 IQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGL 398

Query: 366 TPDRKFYYELIGILCGVERTNYAVELFEKMKRSSLGGYGPVYDVLIPKVCRGGDFEMGRQ 425
            P    Y  ++      E     +EL EKM++        +Y+V+I   C+ G+ +   +
Sbjct: 399 MPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVR 458

Query: 426 LWEEAMAMGVS 436
           LW E    G+S
Sbjct: 459 LWNEMEENGLS 459

[Close]

BLAST of Cmc02g0056791 vs. TAIR 10
Match: AT3G04760.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 121.7 bits (304), Expect = 1.6e-27
Identity = 83/311 (26.69%), Postives = 140/311 (45.02%), Query Frame = 0


Query: 139 LSNLKKADRAMD-----GQ----TFSFVAEAFVKMNRDDEALGLFKNLEKYKCPHDQFTV 198
           L N+ KA R M+     GQ     ++ +   F KMNR D+A  +   +       D  T 
Sbjct: 137 LRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTY 196

Query: 199 VAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEARRILKEMKS 258
             +I +LCS+G    A  V+              Y  L+    ++    EA +++ EM S
Sbjct: 197 NIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLS 256

Query: 259 DGTMPDLFSYNTFLKCLCEKNVEKNPSGLVPEALNVMMEMRSYKIAPNSISYNILLSCLC 318
            G  PD+F+YNT ++ +C++       G+V  A  ++  +      P+ ISYNILL  L 
Sbjct: 257 RGLKPDMFTYNTIIRGMCKE-------GMVDRAFEMVRNLELKGCEPDVISYNILLRALL 316

Query: 319 KTRRVKESCRILEMMKRSGCRPDCVSYYLVARVLFLTGRFGKGREIVDEMIEEGLTPDRK 378
              + +E  +++  M    C P+ V+Y ++   L   G+  +   ++  M E+GLTPD  
Sbjct: 317 NQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAY 376

Query: 379 FYYELIGILCGVERTNYAVELFEKMKRSSLGGYGPVYDVLIPKVCRGGDFEMGRQLWEEA 438
            Y  LI   C   R + A+E  E M           Y+ ++  +C+ G  +   +++ + 
Sbjct: 377 SYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL 436

Query: 439 MAMGVSLNCSS 441
             +G S N SS
Sbjct: 437 GEVGCSPNSSS 440

[Close]

BLAST of Cmc02g0056791 vs. TAIR 10
Match: AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 121.3 bits (303), Expect = 2.1e-27
Identity = 77/321 (23.99%), Postives = 149/321 (46.42%), Query Frame = 0


Query: 119 FNNAIRFFAQKKDYTAINILLSNLKKADRAMDGQTFSFVAEAFVKMNRDDEALGLFKNLE 178
           FN  I+   +        ++L ++       D +TF+ V + +++    D AL + + + 
Sbjct: 192 FNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMV 251

Query: 179 KYKCPHDQFTVVAIITALCSKGHAKRAEGVV--LHHKDKISSTMSCIYRSLLYGWSIKKN 238
           ++ C     +V  I+   C +G  + A   +  + ++D         + +L+ G     +
Sbjct: 252 EFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD-QYTFNTLVNGLCKAGH 311

Query: 239 TKEARRILKEMKSDGTMPDLFSYNTFLKCLCEKNVEKNPSGLVPEALNVMMEMRSYKIAP 298
            K A  I+  M  +G  PD+++YN+ +  LC+        G V EA+ V+ +M +   +P
Sbjct: 312 VKHAIEIMDVMLQEGYDPDVYTYNSVISGLCK-------LGEVKEAVEVLDQMITRDCSP 371

Query: 299 NSISYNILLSCLCKTRRVKESCRILEMMKRSGCRPDCVSYYLVARVLFLTGRFGKGREIV 358
           N+++YN L+S LCK  +V+E+  +  ++   G  PD  ++  + + L LT       E+ 
Sbjct: 372 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 431

Query: 359 DEMIEEGLTPDRKFYYELIGILCGVERTNYAVELFEKMKRSSLGGYGPVYDVLIPKVCRG 418
           +EM  +G  PD   Y  LI  LC   + + A+ + ++M+ S        Y+ LI   C+ 
Sbjct: 432 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA 491

Query: 419 GDFEMGRQLWEEAMAMGVSLN 438
                  ++++E    GVS N
Sbjct: 492 NKTREAEEIFDEMEVHGVSRN 504

The following BLAST results are available for this feature:

BLAST of Cmc02g0056791 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008453221.1	1.2e-279	99.38	PREDICTED: pentatricopeptide repeat-containing protein At5g61370, mitochondrial ...	[more]
XP_004138304.1	6.2e-271	95.69	pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Cucumis sa...	[more]
KAE8652422.1	4.0e-254	95.38	hypothetical protein Csa_013999 [Cucumis sativus]	[more]
XP_038878633.1	3.3e-248	87.89	pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Benincasa ...	[more]
XP_022987424.1	3.2e-243	85.42	pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Cucurbita ...	[more]

BLAST of Cmc02g0056791 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FLJ6	3.0e-159	56.69	Pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Arabidop...	[more]
Q9FME4	1.3e-42	27.71	Pentatricopeptide repeat-containing protein PNM1, mitochondrial OS=Arabidopsis t...	[more]
Q9FH87	9.0e-31	23.18	Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis th...	[more]
Q9SR00	2.3e-26	26.69	Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidop...	[more]
Q9LFF1	3.0e-26	23.99	Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop...	[more]

BLAST of Cmc02g0056791 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7US52	6.0e-280	99.38	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3BV55	6.0e-280	99.38	pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Cucumis ...	[more]
A0A0A0LPF4	3.0e-271	95.69	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G009920 PE=4 SV=1	[more]
A0A6J1JIV3	1.5e-243	85.42	pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Cucurbit...	[more]
A0A6J1E1S0	4.1e-236	83.57	pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Cucurbit...	[more]

BLAST of Cmc02g0056791 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G61370.1	2.1e-160	56.69	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G60960.1	9.5e-44	27.71	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G65820.1	6.4e-32	23.18	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G04760.1	1.6e-27	26.69	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT3G53700.1	2.1e-27	23.99	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 224..265 e-value: 3.2E-5 score: 23.9
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 296..336 e-value: 3.0E-10 score: 40.2
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 223..255 e-value: 0.0024 score: 15.9 coord: 334..367 e-value: 5.6E-4 score: 17.9 coord: 299..333 e-value: 1.7E-10 score: 38.4
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 297..331 score: 13.120733
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 332..366 score: 9.152743
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 59..214 e-value: 2.3E-11 score: 45.5
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 220..487 e-value: 4.2E-37 score: 130.2
None	No IPR available	PANTHER	PTHR47938	RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATED	coord: 35..482
None	No IPR available	PANTHER	PTHR47938:SF9	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN MITOCHONDRIAL	coord: 35..482

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc02g0056791.1	Cmc02g0056791.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding