Cmc02g0056701 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc02g0056701
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	G_PROTEIN_RECEP_F1_2 domain-containing protein
Location	CMiso1.1chr02: 22985045 .. 22986236 (-)
RNA-Seq Expression	Cmc02g0056701
Synteny	Cmc02g0056701

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGGGGTGGGGCTCTACCACCGCCAGGTGGAGGAGGTGGGGGAGGAGCCCCATGCATTGGAGGGGGTGGTGGTGGAGGAACACCATGCATTGGAGGGGGTGGTGGTGGGGGAGGAGCCCCACGCATTGGAGGGGGTGGTGGTGGTGGTGGAGCCCCATGCATTGGAGGAGGTGGTGGTGGGGGAGGAGCTCCATACATTGGTGGAGGTGGTGGTGGTGGAGGAGCACCACGTGATAAAGGCGGTGGCGGAGGAGCCCCAGGCATAGGTGGAGGTGGAGGAGGTGGGGGAGCCCCACGCATGGGAGTTGGCAGAGGAGAAGCTTGATGCATTGATGGAGGTGGAGGTGGAGGTGGTGGAGGAGCCCCACGCATCAAAGGTGGTGGGGGTGGAGGGGGTACCCCTCGCATTGTAGGGGTCAAAGGAGGAGCTGCACCAAACATCGAAGATGGCAAAGGAGGAGGAGGAGGAGGTGGTGGTGGTGGGGGTGGGGGTCCATGCATAGAAGGTGCGGGGGAAGGAGGTGGTCGAAGTAAGGCTCCATACATGGAAGGTGGTGGGGGAGGAGGTGGGGGAGGTGAGGCTCCACACGTGGAAGGTGGTGGTGGTGGTGGAGGAGGTGGTGGAGCTGAGGCTCCATACATGGAAGGTGGTGGGGGAGGAGGTGGTGGAGGTGAGGTTCCATACGTGGAAGGTGGAGGGGGAGGAGGTGGTGAAAGTGAGGCTCCATACATGGAAGGTGGGGGAGGAGGAGGAGGTGGAGATGGAGCTCCATGCATGAAAGGTGGTGGGGGAGGAGGTGGCGGAGGTGAGGCTCTATGCGTTGAAGATGGTGCTCGATGTAATAAAGATGGTGTTGGAGACGCACCATACATGGGTGGGGGTGGAGGTGGTGGGGGTGGAGGTGGTGGGGGTGGGGGTGCTGTTTTCGTTAGAGATGGTGAAGGAAATGCATCATGCATTAATGGGGGTGGGGGTGGGGGTGGTGGAGGTGGTGGAATATGTGCTTCATGTTTCATAGAAGGTGGGGGAGGTGGTAGTGATAATGATATCTCTTTAAGTGACGAGGCAAGAAGAGAAGTACTAGCAATATTCTTTAAGGTAGATGGCATGCCCACAGAAGAAGGTAGAGGTATAGAACCAGTCACCGTACCAGTGTCAACAGAAGAATATATTTTCTCCCATGATGGTTGA

mRNA sequence

TGGGGGTGGGGCTCTACCACCGCCAGGTGGAGGAGGTGGGGGAGGAGCCCCATGCATTGGAGGGGGTGGTGGTGGAGGAACACCATGCATTGGAGGGGGTGGTGGTGGGGGAGGAGCCCCACGCATTGGAGGGGGTGGTGGTGGTGGTGGAGCCCCATGCATTGGAGGAGGTGGTGGTGGGGGAGGAGCTCCATACATTGGTGGAGGTGGTGGTGGTGGAGGAGCACCACGTGATAAAGGCGGTGGCGGAGGAGCCCCAGGCATAGGTGGAGGTGGAGGAGGTGGGGGAGCCCCACGCATGGGAGTTGGCAGAGGAGAAGCTTGATGCATTGATGGAGGTGGAGGTGGAGGTGGTGGAGGAGCCCCACGCATCAAAGGTGGTGGGGGTGGAGGGGGTACCCCTCGCATTGTAGGGGTCAAAGGAGGAGCTGCACCAAACATCGAAGATGGCAAAGGAGGAGGAGGAGGAGGTGGTGGTGGTGGGGGTGGGGGTCCATGCATAGAAGGTGCGGGGGAAGGAGGTGGTCGAAGTAAGGCTCCATACATGGAAGGTGGTGGGGGAGGAGGTGGGGGAGGTGAGGCTCCACACGTGGAAGGTGGTGGTGGTGGTGGAGGAGGTGGTGGAGCTGAGGCTCCATACATGGAAGGTGGTGGGGGAGGAGGTGGTGGAGGTGAGGTTCCATACGTGGAAGGTGGAGGGGGAGGAGGTGGTGAAAGTGAGGCTCCATACATGGAAGGTGGGGGAGGAGGAGGAGGTGGAGATGGAGCTCCATGCATGAAAGGTGGTGGGGGAGGAGGTGGCGGAGGTGAGGCTCTATGCGTTGAAGATGGTGCTCGATGTAATAAAGATGGTGTTGGAGACGCACCATACATGGGTGGGGGTGGAGGTGGTGGGGGTGGAGGTGGTGGGGGTGGGGGTGCTGTTTTCGTTAGAGATGGTGAAGGAAATGCATCATGCATTAATGGGGGTGGGGGTGGGGGTGGTGGAGGTGGTGGAATATGTGCTTCATGTTTCATAGAAGGTGGGGGAGGTGGTAGTGATAATGATATCTCTTTAAGTGACGAGGCAAGAAGAGAAGTACTAGCAATATTCTTTAAGGTAGATGGCATGCCCACAGAAGAAGGTAGAGGTATAGAACCAGTCACCGTACCAGTGTCAACAGAAGAATATATTTTCTCCCATGATGGTTGA

Coding sequence (CDS)

ATGGAAGGTGGTGGGGGAGGAGGTGGGGGAGGTGAGGCTCCACACGTGGAAGGTGGTGGTGGTGGTGGAGGAGGTGGTGGAGCTGAGGCTCCATACATGGAAGGTGGTGGGGGAGGAGGTGGTGGAGGTGAGGTTCCATACGTGGAAGGTGGAGGGGGAGGAGGTGGTGAAAGTGAGGCTCCATACATGGAAGGTGGGGGAGGAGGAGGAGGTGGAGATGGAGCTCCATGCATGAAAGGTGGTGGGGGAGGAGGTGGCGGAGGTGAGGCTCTATGCGTTGAAGATGGTGCTCGATGTAATAAAGATGGTGTTGGAGACGCACCATACATGGGTGGGGGTGGAGGTGGTGGGGGTGGAGGTGGTGGGGGTGGGGGTGCTGTTTTCGTTAGAGATGGTGAAGGAAATGCATCATGCATTAATGGGGGTGGGGGTGGGGGTGGTGGAGGTGGTGGAATATGTGCTTCATGTTTCATAGAAGGTGGGGGAGGTGGTAGTGATAATGATATCTCTTTAAGTGACGAGGCAAGAAGAGAAGTACTAGCAATATTCTTTAAGGTAGATGGCATGCCCACAGAAGAAGGTAGAGGTATAGAACCAGTCACCGTACCAGTGTCAACAGAAGAATATATTTTCTCCCATGATGGTTGA

Protein sequence

MEGGGGGGGGGEAPHVEGGGGGGGGGGAEAPYMEGGGGGGGGGEVPYVEGGGGGGGESEAPYMEGGGGGGGGDGAPCMKGGGGGGGGGEALCVEDGARCNKDGVGDAPYMGGGGGGGGGGGGGGGAVFVRDGEGNASCINGGGGGGGGGGGICASCFIEGGGGGSDNDISLSDEARREVLAIFFKVDGMPTEEGRGIEPVTVPVSTEEYIFSHDG

Homology

[Close]

BLAST of Cmc02g0056701 vs. NCBI nr
Match: OLQ12094.1 (hypothetical protein AK812_SmicGene4053 [Symbiodinium microadriaticum])

HSP 1 Score: 59.7 bits (143), Expect = 3.6e-05
Identity = 97/178 (54.49%), Postives = 106/178 (59.55%), Query Frame = 0


Query: 3   GGGGGGGGGEAPHVEGGGGGGGGGGAEAPYMEGGGGGGGGGEVPYVEGGGGGGGESEAPY 62
           GGGGGGGGG  PH+ GGGGGGGGGG     +E GGGGGG        GGGGGGG  +A  
Sbjct: 364 GGGGGGGGGGLPHITGGGGGGGGGGGGVKQLELGGGGGG--------GGGGGGGGKQASG 423

Query: 63  MEGGGGGGGGDGAPCMKGGGGGGGGGEALCVEDGARCNKDGVGDAPYMGGGG------GG 122
             GGGGGGGG G     GGGGGGGGG       GA     G G     GGGG      GG
Sbjct: 424 GGGGGGGGGGGGRRTWIGGGGGGGGGGG-----GASVRVHGGGGGGGGGGGGVAILRRGG 483

Query: 123 GGGGGGGGGAVFVRD----------GEGNASCINGGGGGGGGGGGICASCFIEGGGGG 165
           GGGGGGGGG  ++R+          G G+  C NGGGGGGGGGGG  ASC++ GGGGG
Sbjct: 484 GGGGGGGGGGEYLRECGGGGGGGGGGGGDIKCQNGGGGGGGGGGG-GASCWMVGGGGG 527

[Close]

BLAST of Cmc02g0056701 vs. NCBI nr
Match: OLQ12088.1 (hypothetical protein AK812_SmicGene4054 [Symbiodinium microadriaticum])

HSP 1 Score: 56.6 bits (135), Expect = 3.0e-04
Identity = 97/184 (52.72%), Postives = 102/184 (55.43%), Query Frame = 0


Query: 3   GGGGGGGGGEAP--HVEGGGGGGGGGGAEAPYMEGGGGGGGGGEVPYVE-------GGGG 62
           GGGGGGGGG AP  H  GGGGGGGGGG + P   GGGGGGGGG    ++       GGGG
Sbjct: 731 GGGGGGGGGGAPSEHHGGGGGGGGGGGGDGPSFPGGGGGGGGGGGGVLKSLTGGGGGGGG 790

Query: 63  GGGESEAPYMEGGGGGGGGDGAPCM-----KGGGGGGGGGEALCVEDGARCNKDGVGDAP 122
           GGG        GGGGGGGG G  C+      GGGGGGGGG  L    G      G G   
Sbjct: 791 GGGGVLGQETGGGGGGGGGGGGGCILNRGGGGGGGGGGGGGPLPAGGGGGGGGGGGGGET 850

Query: 123 YMGGGGGGGGGGGGGGGAVFV--------RDGEGNASCINGGGGGGGGGGGICASCFIEG 165
             G GGGGGGGGGGGG   FV          G G +    GGGGGGGGGGG  A C   G
Sbjct: 851 TQGSGGGGGGGGGGGGDLNFVCGGGGGGGGGGGGGSGSGTGGGGGGGGGGGGVAQCITGG 910

[Close]

BLAST of Cmc02g0056701 vs. ExPASy TrEMBL
Match: A0A1Q9EXA1 (G_PROTEIN_RECEP_F1_2 domain-containing protein OS=Symbiodinium microadriaticum OX=2951 GN=AK812_SmicGene4054 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 1.5e-04
Identity = 97/184 (52.72%), Postives = 102/184 (55.43%), Query Frame = 0


Query: 3   GGGGGGGGGEAP--HVEGGGGGGGGGGAEAPYMEGGGGGGGGGEVPYVE-------GGGG 62
           GGGGGGGGG AP  H  GGGGGGGGGG + P   GGGGGGGGG    ++       GGGG
Sbjct: 731 GGGGGGGGGGAPSEHHGGGGGGGGGGGGDGPSFPGGGGGGGGGGGGVLKSLTGGGGGGGG 790

Query: 63  GGGESEAPYMEGGGGGGGGDGAPCM-----KGGGGGGGGGEALCVEDGARCNKDGVGDAP 122
           GGG        GGGGGGGG G  C+      GGGGGGGGG  L    G      G G   
Sbjct: 791 GGGGVLGQETGGGGGGGGGGGGGCILNRGGGGGGGGGGGGGPLPAGGGGGGGGGGGGGET 850

Query: 123 YMGGGGGGGGGGGGGGGAVFV--------RDGEGNASCINGGGGGGGGGGGICASCFIEG 165
             G GGGGGGGGGGGG   FV          G G +    GGGGGGGGGGG  A C   G
Sbjct: 851 TQGSGGGGGGGGGGGGDLNFVCGGGGGGGGGGGGGSGSGTGGGGGGGGGGGGVAQCITGG 910

The following BLAST results are available for this feature:

BLAST of Cmc02g0056701 vs. NCBI nr


Match Name	E-value	Identity	Description
OLQ12094.1	3.6e-05	54.49	hypothetical protein AK812_SmicGene4053 [Symbiodinium microadriaticum]	[more]
OLQ12088.1	3.0e-04	52.72	hypothetical protein AK812_SmicGene4054 [Symbiodinium microadriaticum]	[more]

BLAST of Cmc02g0056701 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc02g0056701 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1Q9EXA1	1.5e-04	52.72	G_PROTEIN_RECEP_F1_2 domain-containing protein OS=Symbiodinium microadriaticum O...	[more]

BLAST of Cmc02g0056701 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..69

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc02g0056701.1	Cmc02g0056701.1	mRNA