Cmc02g0056341 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc02g0056341
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Glycine-rich RNA-binding protein 2
Location	CMiso1.1chr02: 22760340 .. 22763646 (+)
RNA-Seq Expression	Cmc02g0056341
Synteny	Cmc02g0056341

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCATAAACCACCCGACTGATCAGTGAAGCTTCTAGGGTTTTTGCATCGCGAGCAAGCTGAGGAAGAAGCAGAACAAGGTTTAATCTTTACTCACTTCGTCATTTCTTTATGTTTCTTCTACTTGATCGTTATCTTCTTGTTTGTTTATGCTTTTCCGATTGTATTTGTTGTATAATCGTTGAAAAATGTTCGCACTAGGACACTCGATCGATGTGTTCTTATCACTCTCTAATTGTTTTTCCCACTGGGTTTTGGGGTTTGGGAACTGGATGAGATGATAGTAGGGAATAGGCGACGAGTCTTTTTCTATCTCACCTTTTGCGTATTCGAACTCTTCATCACAGGCTGCTTTTCATTTTTTGTGTTTGGGTCTTGTTTTGGATATTGGGTTTCGTTTCTTACGATATGTAAACTAGCTTAGTGGTACAGAATATGGATCACCTTGTTGTGATTGAAATGTTTTTATTAACCACCAAAACAGAGCTTATGCACGTTGGCATCTATAGGGATAGGTATGGACGTTCTTACGTACACACGTACCGTATTTCACTCATTTCCAGTGTTCTTTTTCTTACATTCTCTTGTTTGGTCGGATTTGGTACGTTCTTGCAATGAGTTTGTTAATAATTGTGTTGCGACAGTGTTTGTGTGTGTACTCTAATTTGTTGAAAATAGAAGTTGAATGTAATTTAATCTGCGGCTAACTGGAAACTTTCATTTTTGCCTTTGAATCGTTGGTTAAATATTCGCCATTTGTTTCTTTCAGGTTGCTTCAAAATGGCTTTTTTAAGTAAGTTTGGAAATATACTGAGGCAGGGTGCAAATAAGAGGGTTGGATTAGATTTGCACCGTTCCAGTTTGTCTCTCTGTCAAGCTGTACGATGGATGTCTTCCATGGAAAGTTCAAAAGTTTTTGTCGGAGGTTCTCTGAGAATACTTTGTTATTGTTATTATTTTTTTATTTGAAGAACGTGTATACGTCAATTTATTTGTCATTATCTTGATTCTTGTGCTTGTATCTACGTTTTCCAGGTATTTCGTTCAGCACTGATGATCAAAGTCTCAGGGAAGCCTTTACCAAATATGGGGAAGTAGTCGAAGGTATATCCCCTAAATCATTTACAGAGTGTCGGAGGTTATCTTTGAAGTATACGTAACATAAATGCAATATGGAATAATAAACTTCAGAACCTCTATAGTCAGATCTGCTCGAGGAATCACGTCTCTTTAAGTTTTAAATATAAATATTAAATATCTTCTGCTATAAGGCTGAGCCAGTGGCTCGGGCGTTGTAGCTGGACACTGCTTGTTTATGCCAAGTCTGTATTTTTTTTTAATAAACGTTGCTTTCCTTGTTTACCCTTCTTTTCTTTGCCACCATTATAGCTAGGGTCATCGTAGACCGTGAAACTGGAAGATCCAGAGGATTCGGATTTGTGACTTACACCTCTAGTGAGGAGGCCTCTAGTGCCATCCAGGCATTGGATGGACAGGTAACGATTCTGCAGTTGAGACATTGAGATTGAAAAGGATAAAACGTTGTGTTATATTCATATGCTGCAATATATTGTTGAATTAATGCATCACAGCTCATATAATGCTTCATGGCAGTTGTCTGCATTCTTAACGGCTGAGCTACTTTTATGAAGATGACTGTATCTTGTTAATGCATTTATGTTAATTGATCTTGTGTAAATGTCTTCATGCAATACCTTAAATGCCACATTTTCTGTAGCAAATTTTAGTGACACAGCGATATCGAGAGCTTTAAAATGTGGAGGTATAGTAGGCCGTTCTTCGTACTGTGCTCAAAAAGTTTATTTGTGTTATAATGTAAAGTGTTTTAGGAACTGTCCTGTGTGATAAATTTGTATATTGGAGGCTTTCCTTTCTACTTATATTCTCAAATAGATGGTAAGGTTAGCATACAAAATTGCCATTTAGATATTTGTAGAAGAAGAAATGCTAAAGTGATGAGTGATTATGATGTATGGAATTTGGAGACTTGTTCCACTTTCAAATCTATGAGAACAAATCATATTAAACCGACTGACTAATTATCAAGATTCATTCTTTTTAGTTAATTTAATTTGGTAGTCTACATTTTCGAAACAGTAAATCAAATGACTCAGGTTAATAATATTTCTGTTCCTTCTACAACAGGACCTTCATGGTCGCCGGGTGAGAGTGAATTATGCTAATGATAATAGACCTCGTGGCTTTGGTGGTGGTGGTGGTTATGGTGGCGGCGGCGGCGGTTACGGTGGTGGCGGTTACGGTGGTGGTGGTGGTTATGGTGCTGGTGGTGGTTATGGTGCTGGTGGGGGTTACGGAGGTGGTGGTGGGGCTTATGGAGGTGGTGGCTATAGTGGTGGTGGTGCTGGAGGCAATTATGGCCGAGGAAGTGGAGGAAATTATAGCAACGATTATGCCAGTGACAACCGTGGAAGTGTTGGTGGCTTCGGTGGAAATGATGCTGGCTATAACGCTGCTAGCAATTTTGCTTCTGGAAACACATTCGGTAGCGAAAGTAATGCAGGTTTTGGTAGCGGCAGTGGCGGCGACTATTTTGCCAATGGTAGTGGGGAGGGACAATTTGGCAGCAACGAAACAAATTCCATGAATGCATCTGGAGAGGAGCAATTCGAAGAAAATGCTAGGGACGGAGATGACACAGACGACTTTGCTAAAAGAGCCTGATAGATTTTTCCATATGCACTATCCATAGTCAACTTCATCCAGCATTTTTGGTTATGGCTATGTAGATTTTCCCTACATTCTACCATACTGGAACCCTCTGACTTTGTTTCCATATGTTTGAGACTTGCTTCGATGATTGTGAATTTTCAATTGAACTTCCAATCTAGTTTCTCAATGATAAATAAGTAGTGTTTTTTTGCCCCTGCTCTATTAGGAGGGTACCATCTTCTCTTATTATGGTCGGTGGGGGGACTCCAGTGTTGTTTGCAGCCATACTACATTGTTCTCGTTTTTGTCTATTATATCTCTCAACTCCATAGAAAGTATTTGTTGGTGTCGGTGTCGGTGTCGTTTGGTTGTGTTTTGAAGTAAAGAGTCTATTGGTTGGACTCAAAAAGTTGAGTTAAAAATTATTTGGTGCAACGGAGAAGTTTGTGATTAGGGTTTAAAGTTAACATTCCTGGGTGCACAAGAGTGAACCATATGGAGGTTGGTAGGTCTAGTCTAATAGCATGGTTTTATCATACTTGTTTTGTTTTGATAGGTCAATTGTAATGGACTAAATTTCAAATGTGATCCAATTGCATTTGATTGCATTTTTAATGTC

mRNA sequence

GCATAAACCACCCGACTGATCAGTGAAGCTTCTAGGGTTTTTGCATCGCGAGCAAGCTGAGGAAGAAGCAGAACAAGGTTGCTTCAAAATGGCTTTTTTAAGTAAGTTTGGAAATATACTGAGGCAGGGTGCAAATAAGAGGGTTGGATTAGATTTGCACCGTTCCAGTTTGTCTCTCTGTCAAGCTGTACGATGGATGTCTTCCATGGAAAGTTCAAAAGTTTTTGTCGGAGGTATTTCGTTCAGCACTGATGATCAAAGTCTCAGGGAAGCCTTTACCAAATATGGGGAAGTAGTCGAAGCTAGGGTCATCGTAGACCGTGAAACTGGAAGATCCAGAGGATTCGGATTTGTGACTTACACCTCTAGTGAGGAGGCCTCTAGTGCCATCCAGGCATTGGATGGACAGGACCTTCATGGTCGCCGGGTGAGAGTGAATTATGCTAATGATAATAGACCTCGTGGCTTTGGTGGTGGTGGTGGTTATGGTGGCGGCGGCGGCGGTTACGGTGGTGGCGGTTACGGTGGTGGTGGTGGTTATGGTGCTGGTGGTGGTTATGGTGCTGGTGGGGGTTACGGAGGTGGTGGTGGGGCTTATGGAGGTGGTGGCTATAGTGGTGGTGGTGCTGGAGGCAATTATGGCCGAGGAAGTGGAGGAAATTATAGCAACGATTATGCCAGTGACAACCGTGGAAGTGTTGGTGGCTTCGGTGGAAATGATGCTGGCTATAACGCTGCTAGCAATTTTGCTTCTGGAAACACATTCGGTAGCGAAAGTAATGCAGGTTTTGGTAGCGGCAGTGGCGGCGACTATTTTGCCAATGGTAGTGGGGAGGGACAATTTGGCAGCAACGAAACAAATTCCATGAATGCATCTGGAGAGGAGCAATTCGAAGAAAATGCTAGGGACGGAGATGACACAGACGACTTTGCTAAAAGAGCCTGATAGATTTTTCCATATGCACTATCCATAGTCAACTTCATCCAGCATTTTTGGTTATGGCTATGTAGATTTTCCCTACATTCTACCATACTGGAACCCTCTGACTTTGTTTCCATATGTTTGAGACTTGCTTCGATGATTGTGAATTTTCAATTGAACTTCCAATCTAGTTTCTCAATGATAAATAAGTAGTGTTTTTTTGCCCCTGCTCTATTAGGAGGGTACCATCTTCTCTTATTATGGTCGGTGGGGGGACTCCAGTGTTGTTTGCAGCCATACTACATTGTTCTCGTTTTTGTCTATTATATCTCTCAACTCCATAGAAAGTATTTGTTGGTGTCGGTGTCGGTGTCGTTTGGTTGTGTTTTGAAGTAAAGAGTCTATTGGTTGGACTCAAAAAGTTGAGTTAAAAATTATTTGGTGCAACGGAGAAGTTTGTGATTAGGGTTTAAAGTTAACATTCCTGGGTGCACAAGAGTGAACCATATGGAGGTTGGTAGGTCTAGTCTAATAGCATGGTTTTATCATACTTGTTTTGTTTTGATAGGTCAATTGTAATGGACTAAATTTCAAATGTGATCCAATTGCATTTGATTGCATTTTTAATGTC

Coding sequence (CDS)

ATGGCTTTTTTAAGTAAGTTTGGAAATATACTGAGGCAGGGTGCAAATAAGAGGGTTGGATTAGATTTGCACCGTTCCAGTTTGTCTCTCTGTCAAGCTGTACGATGGATGTCTTCCATGGAAAGTTCAAAAGTTTTTGTCGGAGGTATTTCGTTCAGCACTGATGATCAAAGTCTCAGGGAAGCCTTTACCAAATATGGGGAAGTAGTCGAAGCTAGGGTCATCGTAGACCGTGAAACTGGAAGATCCAGAGGATTCGGATTTGTGACTTACACCTCTAGTGAGGAGGCCTCTAGTGCCATCCAGGCATTGGATGGACAGGACCTTCATGGTCGCCGGGTGAGAGTGAATTATGCTAATGATAATAGACCTCGTGGCTTTGGTGGTGGTGGTGGTTATGGTGGCGGCGGCGGCGGTTACGGTGGTGGCGGTTACGGTGGTGGTGGTGGTTATGGTGCTGGTGGTGGTTATGGTGCTGGTGGGGGTTACGGAGGTGGTGGTGGGGCTTATGGAGGTGGTGGCTATAGTGGTGGTGGTGCTGGAGGCAATTATGGCCGAGGAAGTGGAGGAAATTATAGCAACGATTATGCCAGTGACAACCGTGGAAGTGTTGGTGGCTTCGGTGGAAATGATGCTGGCTATAACGCTGCTAGCAATTTTGCTTCTGGAAACACATTCGGTAGCGAAAGTAATGCAGGTTTTGGTAGCGGCAGTGGCGGCGACTATTTTGCCAATGGTAGTGGGGAGGGACAATTTGGCAGCAACGAAACAAATTCCATGAATGCATCTGGAGAGGAGCAATTCGAAGAAAATGCTAGGGACGGAGATGACACAGACGACTTTGCTAAAAGAGCCTGA

Protein sequence

MAFLSKFGNILRQGANKRVGLDLHRSSLSLCQAVRWMSSMESSKVFVGGISFSTDDQSLREAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYANDNRPRGFGGGGGYGGGGGGYGGGGYGGGGGYGAGGGYGAGGGYGGGGGAYGGGGYSGGGAGGNYGRGSGGNYSNDYASDNRGSVGGFGGNDAGYNAASNFASGNTFGSESNAGFGSGSGGDYFANGSGEGQFGSNETNSMNASGEEQFEENARDGDDTDDFAKRA

Homology

[Close]

BLAST of Cmc02g0056341 vs. NCBI nr
Match: XP_008453280.1 (PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like [Cucumis melo] >KAA0057995.1 glycine-rich RNA-binding protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 480.7 bits (1236), Expect = 8.6e-132
Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 0


Query: 1   MAFLSKFGNILRQGANKRVGLDLHRSSLSLCQAVRWMSSMESSKVFVGGISFSTDDQSLR 60
           MAFLSKFGNILRQGANKRVGLDLHRSSLSLCQAVRWMSSMESSKVFVGGISFSTDDQSLR
Sbjct: 1   MAFLSKFGNILRQGANKRVGLDLHRSSLSLCQAVRWMSSMESSKVFVGGISFSTDDQSLR 60

Query: 61  EAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120
           EAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN
Sbjct: 61  EAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120

Query: 121 DNRPRGFGGGGGYGGGGGGYGGGGYGGGGGYGAGGGYGAGGGYGGGGGAYGGGGYSGGGA 180
           DNRPRGFGGGGGYGGGGGGYGGGGYGGGGGYGAGGGYGAGGGYGGGGGAYGGGGYSGGGA
Sbjct: 121 DNRPRGFGGGGGYGGGGGGYGGGGYGGGGGYGAGGGYGAGGGYGGGGGAYGGGGYSGGGA 180

Query: 181 GGNYGRGSGGNYSNDYASDNRGSVGGFGGNDAGYNAASNFASGNTFGSESNAGFGSGSGG 240
           GGNYGRGSGGNYSNDYASDNRGSVGGFGGNDAGYNAASNFASGNTFGSESNAGFGSGSGG
Sbjct: 181 GGNYGRGSGGNYSNDYASDNRGSVGGFGGNDAGYNAASNFASGNTFGSESNAGFGSGSGG 240

Query: 241 DYFANGSGEGQFGSNETNSMNASGEEQFEENARDGDDTDDFAKRA 286
           DYFANGSGEGQFGSNETNSMNASGEEQFEENARDGDDTDDFAKRA
Sbjct: 241 DYFANGSGEGQFGSNETNSMNASGEEQFEENARDGDDTDDFAKRA 285

[Close]

BLAST of Cmc02g0056341 vs. NCBI nr
Match: XP_011648448.2 (glycine-rich RNA-binding protein blt801 [Cucumis sativus] >KAE8652435.1 hypothetical protein Csa_013177 [Cucumis sativus])

HSP 1 Score: 392.9 bits (1008), Expect = 2.4e-105
Identity = 255/296 (86.15%), Postives = 263/296 (88.85%), Query Frame = 0


Query: 1   MAFLSKFGNILRQGANKRVGLDLHRSSLSLCQAVRWMSSMESSKVFVGGISFSTDDQSLR 60
           MAFLSKFGNILRQGANKR+GLDLHRSSLSL QAVRWMSSMESSKVFVGGISFSTDDQSLR
Sbjct: 1   MAFLSKFGNILRQGANKRIGLDLHRSSLSLSQAVRWMSSMESSKVFVGGISFSTDDQSLR 60

Query: 61  EAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120
           EAFTKYGEV+EARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN
Sbjct: 61  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120

Query: 121 DNRPRGFGGGGGYGGGGGGYGGGGYGGGGGYGAGGGYGAGGGYG-GGGGAYGGGGYSGGG 180
           D   R  GGGGGY  GGGGYGGGGYGGGGGYG GGGYG GGGYG GGGGAYGGGGYSGGG
Sbjct: 121 D---RARGGGGGY--GGGGYGGGGYGGGGGYGGGGGYGGGGGYGAGGGGAYGGGGYSGGG 180

Query: 181 A----------GGNYGRGSGGNYSNDYASDNRGSVGGFGGNDAGYNAASNFASGNTFGSE 240
           A          GGNYG GSGGN+SNDYASDNRGSVGGFGGNDAGYNAASNFA+GNTFGSE
Sbjct: 181 AGGYGGYSGMGGGNYGGGSGGNFSNDYASDNRGSVGGFGGNDAGYNAASNFATGNTFGSE 240

Query: 241 SNAGFGSGSGGDYFANGSGEGQFGSNETNSMNASGEEQFEENARDGDDTDDFAKRA 286
           SNAGFGS    DYFA   GE QFGSNETN+M ASGE+ FEENARD DD++DFAKRA
Sbjct: 241 SNAGFGS---SDYFAKSEGE-QFGSNETNTMKASGEDHFEENARDEDDSNDFAKRA 287

[Close]

BLAST of Cmc02g0056341 vs. NCBI nr
Match: XP_038878732.1 (glycine-rich RNA-binding protein 3, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 332.4 bits (851), Expect = 3.8e-87
Identity = 240/326 (73.62%), Postives = 255/326 (78.22%), Query Frame = 0


Query: 1   MAFLSKFGNILRQGANKRVGLDLHRSSLSLCQAVRWMSSMESSKVFVGGISFSTDDQSLR 60
           MAFL KFGNILRQGANKR+GLDL  SSLS+CQAVRWMSSM+SSK+FVGGIS++TDDQSLR
Sbjct: 1   MAFLGKFGNILRQGANKRIGLDLQASSLSICQAVRWMSSMQSSKLFVGGISYNTDDQSLR 60

Query: 61  EAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120
           EAF KYGEV+EAR+IVDRETGRSRGFGFVT+TSSEEASSAIQALDGQDLHGRRVRVNYAN
Sbjct: 61  EAFAKYGEVLEARIIVDRETGRSRGFGFVTFTSSEEASSAIQALDGQDLHGRRVRVNYAN 120

Query: 121 DNRPRGFGGGGG-----YGGGGGGYGGGGYGGGGGYG-AGGGYGAGGGY-GGGGGAYGGG 180
           D R RGFGGGGG     YGGGGGGYGGGGYGGGGG G  GGGYG GGGY GGG G YGGG
Sbjct: 121 D-RTRGFGGGGGYGGGSYGGGGGGYGGGGYGGGGGDGYGGGGYGGGGGYSGGGAGGYGGG 180

Query: 181 GYSGG-------------GAGGNYGRGSGGNYSNDYASDNRGSV----GGFGGNDAGYNA 240
           G  GG              +GGNY RGSGGNYSND ASDN GSV    GGFGGNDAGYNA
Sbjct: 181 GSGGGYGDGSGGYSGTGYSSGGNYSRGSGGNYSNDNASDNLGSVGTGGGGFGGNDAGYNA 240

Query: 241 ASNFASGNTFGSESNAGFG--SGSGGDYFANG-----------SGEGQFGSNETNSMNAS 286
           ASNFASGNT  S +NAGFG  SG G DYFAN            +G  QFGS ETN+M+AS
Sbjct: 241 ASNFASGNTHDSGTNAGFGNVSGGGSDYFANSGFDASSGVGGYTGGEQFGS-ETNTMDAS 300

[Close]

BLAST of Cmc02g0056341 vs. NCBI nr
Match: XP_022921902.1 (glycine-rich RNA-binding protein 3, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 304.7 bits (779), Expect = 8.5e-79
Identity = 227/318 (71.38%), Postives = 245/318 (77.04%), Query Frame = 0


Query: 1   MAFLSKFGNILRQGANKRVGLDLHRSSLSLCQAVRWMSSMESSKVFVGGISFSTDDQSLR 60
           MAFLSK GNILRQGANKR GL+    SLS+ QAVRWMSSM+SSKVF+GGIS+STDDQSLR
Sbjct: 1   MAFLSKVGNILRQGANKRTGLNFQAPSLSIFQAVRWMSSMQSSKVFIGGISYSTDDQSLR 60

Query: 61  EAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120
           EAFTKYGEV+EARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN
Sbjct: 61  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120

Query: 121 DNRPRGFGGGGGYGGGGGGYGGGGY-GGGGGYGAGGGYGAGGGYGGGGGAYGGGGYSGGG 180
           D R RG  GGGGYGGGGGGYGGGGY GGGGGYG GGG   GG YGGGGG+YGGG Y GGG
Sbjct: 121 D-RSRGM-GGGGYGGGGGGYGGGGYGGGGGGYGGGGGGYGGGSYGGGGGSYGGGSYGGGG 180

Query: 181 A-GGNYGRGSGG----------NYSNDYASDNRGSVG--GFGGNDAGYNAASNFASGNTF 240
           + GG YG  SGG          NYS+ + S ++GS G  G GGNDAG NAASNFASGNTF
Sbjct: 181 SGGGGYGGESGGGFGSGFSAGDNYSSSFGSGSQGSGGNYGTGGNDAGSNAASNFASGNTF 240

Query: 241 GSESNAGFG---SGSGGDYFANG-----------SGEGQFGSNETNSMNASGE----EQF 286
           GS ++AGF    S  GGDYFAN            +G  QFGSNE N++NASG+    EQ 
Sbjct: 241 GSGTSAGFDTNVSNGGGDYFANSGSDASSGFGGYTGGDQFGSNEANTLNASGDQGLGEQL 300

[Close]

BLAST of Cmc02g0056341 vs. NCBI nr
Match: KAG6589603.1 (Glycine-rich RNA-binding protein 3, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 303.9 bits (777), Expect = 1.4e-78
Identity = 227/323 (70.28%), Postives = 244/323 (75.54%), Query Frame = 0


Query: 1   MAFLSKFGNILRQGANKRVGLDLHRSSLSLCQAVRWMSSMESSKVFVGGISFSTDDQSLR 60
           MAFLSK GNILRQGANKR GL+L   SLS+ QAVRWMSSM+SSKVF+GGIS+STDDQSLR
Sbjct: 15  MAFLSKVGNILRQGANKRTGLNLQAPSLSIFQAVRWMSSMQSSKVFIGGISYSTDDQSLR 74

Query: 61  EAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120
           EAFTKYGEV+EARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN
Sbjct: 75  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 134

Query: 121 DNRPRGFGGGGGYGGGGGGYGGGGYG------GGGGYGAGGGYGAGGGYGGGGGAYGGGG 180
           D R RG  GGGGYGGGGGGYGGGGYG      GGGGYG GGGYG GG YGGGGG+YGGG 
Sbjct: 135 D-RSRGM-GGGGYGGGGGGYGGGGYGGGGGGYGGGGYGGGGGYGGGGSYGGGGGSYGGGA 194

Query: 181 YSGG-GAGGNYGRGSGG----------NYSNDYASDNRGSVG--GFGGNDAGYNAASNFA 240
           Y GG   GG YG  SGG          NYS+ + S ++GS G  G GGNDAG NAASNFA
Sbjct: 195 YGGGVSGGGGYGGESGGGFGSGFSAGDNYSSSFGSGSQGSGGNYGTGGNDAGSNAASNFA 254

Query: 241 SGNTFGSESNAGFG---SGSGGDYFANG-----------SGEGQFGSNETNSMNASGE-- 286
           SGNTFGS ++A F    S  GGDYFAN            +G  Q GSNE N++NASG+  
Sbjct: 255 SGNTFGSGTSADFDTNVSNGGGDYFANSGSDASSGFGGYTGGDQLGSNEANTLNASGDQG 314

[Close]

BLAST of Cmc02g0056341 vs. ExPASy Swiss-Prot
Match: Q9FNR1 (Glycine-rich RNA-binding protein 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBG3 PE=1 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 8.3e-45
Identity = 175/317 (55.21%), Postives = 201/317 (63.41%), Query Frame = 0


Query: 1   MAFLSKFGNILRQGANKRVGLDLHRSSLSLCQAVRWMSSMESSKVFVGGISFSTDDQSLR 60
           MAFLSKFGNIL+Q  NK++   +  SS SL QA+R MS   SSK+F+GG+++S D+ SLR
Sbjct: 1   MAFLSKFGNILKQTTNKQLNAQVSLSSPSLFQAIRCMS---SSKLFIGGMAYSMDEDSLR 60

Query: 61  EAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120
           EAFTKYGEVV+ RVI+DRETGRSRGFGFVT+TSSE ASSAIQALDG+DLHGR V+VNYAN
Sbjct: 61  EAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAIQALDGRDLHGRVVKVNYAN 120

Query: 121 DNRPRGFGGGGGYGGGGGGYGG-GGYGGG-GGYGAGGGYGAG-GGYGG-GGGAYGG---- 180
           D    G  GGGGYGGGGGGYGG GGYGGG GGYG  GGYG G GGYGG  GG YGG    
Sbjct: 121 DRTSGGGFGGGGYGGGGGGYGGSGGYGGGAGGYGGSGGYGGGAGGYGGNSGGGYGGNAAG 180

Query: 181 -------GGYSG-----GGAGGNYGRGSG-GNYSNDYASDNRGSVGGFGGNDAGYNAASN 240
                  GGY G     GGAGG YG   G G+  N Y   +  S G  G     YN +S 
Sbjct: 181 GYGGSGAGGYGGDATGHGGAGGGYGSSGGFGSSGNTYGEGSSASAGAVG----DYNGSSG 240

Query: 241 FASGNTFGSESNAGFGSGS--GGDYFANGSGEGQFGSNETNSMNASGEEQF--------- 286
           + S NT+GS SN GF   S  GG    N S  G   +  T      GE+QF         
Sbjct: 241 YGSANTYGS-SNGGFAGDSQFGGSPVGNSSQFGGDNTQFTAGGQFGGEDQFGSMEKSETK 300

[Close]

BLAST of Cmc02g0056341 vs. ExPASy Swiss-Prot
Match: Q9SVM8 (Glycine-rich RNA-binding protein 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBG2 PE=1 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 8.4e-29
Identity = 93/181 (51.38%), Postives = 121/181 (66.85%), Query Frame = 0


Query: 1   MAFLSKFGNILRQGANKRVGLDLHRSSLSLCQAVRWMSSMESSKVFVGGISFSTDDQSLR 60
           MAF +K G +LRQ  +    + +     S+  ++R M    S+K+F+GG+S+ TDD SLR
Sbjct: 1   MAFCNKLGGLLRQNISSNGNVPV----TSMLGSLRLM----STKLFIGGLSWGTDDASLR 60

Query: 61  EAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120
           +AF  +G+VV+A+VIVDRETGRSRGFGFV +     A++AI  +DG++L+GR +RVN AN
Sbjct: 61  DAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPAN 120

Query: 121 D--NRPRGFGGGGGYGGGGGGYGGGGYGGGGGYGAGGGYGAGGGYGGGGGAYGGGGYSGG 180
           D  + PR +GGGGGY GGGGGYGGG                GGGYGGGGG YGGGG  GG
Sbjct: 121 DRPSAPRAYGGGGGYSGGGGGYGGG----------------GGGYGGGGGGYGGGGDGGG 157

[Close]

BLAST of Cmc02g0056341 vs. ExPASy Swiss-Prot
Match: Q9C909 (Glycine-rich RNA-binding protein 5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBG5 PE=1 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.0e-26
Identity = 149/306 (48.69%), Postives = 178/306 (58.17%), Query Frame = 0


Query: 1   MAFLSKFGNILRQGANKRVGLDLHRSSLSLCQAVRWMSSMESSKVFVGGISFSTDDQSLR 60
           MAFLSK G +  Q ++         +S S+ Q++R MS   SSK+FVGGIS+STD+  LR
Sbjct: 1   MAFLSKVGRLFSQTSSHVT------ASSSMLQSIRCMS---SSKIFVGGISYSTDEFGLR 60

Query: 61  EAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120
           EAF+KYGEVV+A++IVDRETGRSRGF FVT+TS+EEAS+A+Q LDGQDLHGRR+RVNYA 
Sbjct: 61  EAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQ-LDGQDLHGRRIRVNYAT 120

Query: 121 DNRP----RGFGG-GGGYGGGGGGYG--GGGYGGG-GGY----------GAGGGYGAGGG 180
           +       RGFGG GGGYG   GGYG   GGYGGG GGY          G GGGYG    
Sbjct: 121 ERGSGFGGRGFGGPGGGYGASDGGYGAPAGGYGGGAGGYGGNSSYSGNAGGGGGYGGNSS 180

Query: 181 YGGGGGAYGGG-GYSGG--GAGGNYGRGSGGNYSNDYASDNRGSVGGFGGNDAGYNAASN 240
           YGG  G YGG   YSG   G GG YG   GG      A    GS     G+         
Sbjct: 181 YGGNAGGYGGNPPYSGNAVGGGGGYGSNFGGGGGYGVAGGVGGSENFAQGSSTNAGFDDK 240

Query: 241 FASGNTFGSESNAGFGSGSGGDYFANGSGEGQFGSNETNSMNASGEEQFEENARDGDDTD 286
           F S    G++++    SG GGD    GS + QFG  E N    +G   F++      D  
Sbjct: 241 FESNQPLGNDTDHQTESGLGGDEQFGGS-DNQFGDAE-NGNTENGPVGFDQT-----DDG 289

[Close]

BLAST of Cmc02g0056341 vs. ExPASy Swiss-Prot
Match: Q43472 (Glycine-rich RNA-binding protein blt801 OS=Hordeum vulgare OX=4513 GN=blt801 PE=1 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 3.8e-21
Identity = 92/159 (57.86%), Postives = 112/159 (70.44%), Query Frame = 0


Query: 44  KVFVGGISFSTDDQSLREAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQA 103
           + FVGG+ ++TDDQSL+ AF+KYG+V+++++I DRETGRSRGFGFVT+ S E    AI+A
Sbjct: 7   RCFVGGLRWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEA 66

Query: 104 LDGQDLHGRRVRVNYANDNRPRGFGGGGGYGGGGGGY-------GGGGYGGGGGYGAGGG 163
           ++GQDL GR + VN A   R     GGGG+GGGGGGY       GGGGYGGGGG   GG 
Sbjct: 67  MNGQDLDGRNITVNEAQSRRS---DGGGGFGGGGGGYGGQRREGGGGGYGGGGGGYGGGR 126

Query: 164 YGAGGGYG---GGGGAYGGGGYSGGGAGGNYGRGSGGNY 193
            G GGGYG   GGGG YGGG   GGG GG+ G   GGN+
Sbjct: 127 SGGGGGYGSRDGGGGGYGGG---GGGYGGSRGGSGGGNW 159

[Close]

BLAST of Cmc02g0056341 vs. ExPASy Swiss-Prot
Match: Q99070 (Glycine-rich RNA-binding protein 2 OS=Sorghum bicolor OX=4558 GN=GRP2 PE=2 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 3.5e-19
Identity = 94/164 (57.32%), Postives = 120/164 (73.17%), Query Frame = 0


Query: 44  KVFVGGISFSTDDQSLREAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQA 103
           + FVGG++++T++++L +AF  +G+V++++VI DRETGRSRGFGFVT++S +    AI+ 
Sbjct: 9   RCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIEN 68

Query: 104 LDGQDLHGRRVRVNYANDNRPRGFGGGGGYGGGGGGYG---GGGY-GGGGGYG----AGG 163
           ++G++L GR + VN A      G GGGGGYGGGGGGYG   GGGY GGGGGYG     GG
Sbjct: 69  MNGKELDGRNITVNQAQSR--GGGGGGGGYGGGGGGYGGREGGGYGGGGGGYGGRREGGG 128

Query: 164 GYGAGGGYGGGGGAY----GGGGYSGGGA-GGNYGRGSGGNYSN 195
           GYG GGGYGGGGG Y    GGGGY GGG  GGN G  SGGN+ N
Sbjct: 129 GYG-GGGYGGGGGGYGGREGGGGYGGGGGYGGNRG-DSGGNWRN 168

[Close]

BLAST of Cmc02g0056341 vs. ExPASy TrEMBL
Match: A0A5A7UWK3 (Glycine-rich RNA-binding protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002990 PE=4 SV=1)

HSP 1 Score: 480.7 bits (1236), Expect = 4.2e-132
Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 0


Query: 1   MAFLSKFGNILRQGANKRVGLDLHRSSLSLCQAVRWMSSMESSKVFVGGISFSTDDQSLR 60
           MAFLSKFGNILRQGANKRVGLDLHRSSLSLCQAVRWMSSMESSKVFVGGISFSTDDQSLR
Sbjct: 1   MAFLSKFGNILRQGANKRVGLDLHRSSLSLCQAVRWMSSMESSKVFVGGISFSTDDQSLR 60

Query: 61  EAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120
           EAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN
Sbjct: 61  EAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120

Query: 121 DNRPRGFGGGGGYGGGGGGYGGGGYGGGGGYGAGGGYGAGGGYGGGGGAYGGGGYSGGGA 180
           DNRPRGFGGGGGYGGGGGGYGGGGYGGGGGYGAGGGYGAGGGYGGGGGAYGGGGYSGGGA
Sbjct: 121 DNRPRGFGGGGGYGGGGGGYGGGGYGGGGGYGAGGGYGAGGGYGGGGGAYGGGGYSGGGA 180

Query: 181 GGNYGRGSGGNYSNDYASDNRGSVGGFGGNDAGYNAASNFASGNTFGSESNAGFGSGSGG 240
           GGNYGRGSGGNYSNDYASDNRGSVGGFGGNDAGYNAASNFASGNTFGSESNAGFGSGSGG
Sbjct: 181 GGNYGRGSGGNYSNDYASDNRGSVGGFGGNDAGYNAASNFASGNTFGSESNAGFGSGSGG 240

Query: 241 DYFANGSGEGQFGSNETNSMNASGEEQFEENARDGDDTDDFAKRA 286
           DYFANGSGEGQFGSNETNSMNASGEEQFEENARDGDDTDDFAKRA
Sbjct: 241 DYFANGSGEGQFGSNETNSMNASGEEQFEENARDGDDTDDFAKRA 285

[Close]

BLAST of Cmc02g0056341 vs. ExPASy TrEMBL
Match: A0A1S3BVW4 (glycine-rich RNA-binding protein 2, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103494047 PE=4 SV=1)

HSP 1 Score: 480.7 bits (1236), Expect = 4.2e-132
Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 0


Query: 1   MAFLSKFGNILRQGANKRVGLDLHRSSLSLCQAVRWMSSMESSKVFVGGISFSTDDQSLR 60
           MAFLSKFGNILRQGANKRVGLDLHRSSLSLCQAVRWMSSMESSKVFVGGISFSTDDQSLR
Sbjct: 1   MAFLSKFGNILRQGANKRVGLDLHRSSLSLCQAVRWMSSMESSKVFVGGISFSTDDQSLR 60

Query: 61  EAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120
           EAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN
Sbjct: 61  EAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120

Query: 121 DNRPRGFGGGGGYGGGGGGYGGGGYGGGGGYGAGGGYGAGGGYGGGGGAYGGGGYSGGGA 180
           DNRPRGFGGGGGYGGGGGGYGGGGYGGGGGYGAGGGYGAGGGYGGGGGAYGGGGYSGGGA
Sbjct: 121 DNRPRGFGGGGGYGGGGGGYGGGGYGGGGGYGAGGGYGAGGGYGGGGGAYGGGGYSGGGA 180

Query: 181 GGNYGRGSGGNYSNDYASDNRGSVGGFGGNDAGYNAASNFASGNTFGSESNAGFGSGSGG 240
           GGNYGRGSGGNYSNDYASDNRGSVGGFGGNDAGYNAASNFASGNTFGSESNAGFGSGSGG
Sbjct: 181 GGNYGRGSGGNYSNDYASDNRGSVGGFGGNDAGYNAASNFASGNTFGSESNAGFGSGSGG 240

Query: 241 DYFANGSGEGQFGSNETNSMNASGEEQFEENARDGDDTDDFAKRA 286
           DYFANGSGEGQFGSNETNSMNASGEEQFEENARDGDDTDDFAKRA
Sbjct: 241 DYFANGSGEGQFGSNETNSMNASGEEQFEENARDGDDTDDFAKRA 285

[Close]

BLAST of Cmc02g0056341 vs. ExPASy TrEMBL
Match: A0A0A0LPA9 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G013770 PE=4 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 1.7e-104
Identity = 251/295 (85.08%), Postives = 259/295 (87.80%), Query Frame = 0


Query: 1   MAFLSKFGNILRQGANKRVGLDLHRSSLSLCQAVRWMSSMESSKVFVGGISFSTDDQSLR 60
           MAFLSKFGNILRQGANKR+GLDLHRSSLSL QAVRWMSSMESSKVFVGGISFSTDDQSLR
Sbjct: 1   MAFLSKFGNILRQGANKRIGLDLHRSSLSLSQAVRWMSSMESSKVFVGGISFSTDDQSLR 60

Query: 61  EAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120
           EAFTKYGEV+EARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN
Sbjct: 61  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120

Query: 121 DNRPRGFGGGGGYGGGGGGYGGGGYGGGGGYGAGGGYGAGGGYGGGGGAYGGGGYSGGGA 180
           D   R  GGGGGY  GGGGYGGGGYGGGGGYG GGGYGA     GGGGAYGGGGYSGGGA
Sbjct: 121 D---RARGGGGGY--GGGGYGGGGYGGGGGYGGGGGYGA-----GGGGAYGGGGYSGGGA 180

Query: 181 ----------GGNYGRGSGGNYSNDYASDNRGSVGGFGGNDAGYNAASNFASGNTFGSES 240
                     GGNYG GSGGN+SNDYASDNRGSVGGFGGNDAGYNAASNFA+GNTFGSES
Sbjct: 181 GGYGGYSGMGGGNYGGGSGGNFSNDYASDNRGSVGGFGGNDAGYNAASNFATGNTFGSES 240

Query: 241 NAGFGSGSGGDYFANGSGEGQFGSNETNSMNASGEEQFEENARDGDDTDDFAKRA 286
           NAGFGS    DYFA   GE QFGSNETN+M ASGE+ FEENARD DD++DFAKRA
Sbjct: 241 NAGFGS---SDYFAKSEGE-QFGSNETNTMKASGEDHFEENARDEDDSNDFAKRA 281

[Close]

BLAST of Cmc02g0056341 vs. ExPASy TrEMBL
Match: A0A6J1E1P2 (glycine-rich RNA-binding protein 3, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111430026 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 4.1e-79
Identity = 227/318 (71.38%), Postives = 245/318 (77.04%), Query Frame = 0


Query: 1   MAFLSKFGNILRQGANKRVGLDLHRSSLSLCQAVRWMSSMESSKVFVGGISFSTDDQSLR 60
           MAFLSK GNILRQGANKR GL+    SLS+ QAVRWMSSM+SSKVF+GGIS+STDDQSLR
Sbjct: 1   MAFLSKVGNILRQGANKRTGLNFQAPSLSIFQAVRWMSSMQSSKVFIGGISYSTDDQSLR 60

Query: 61  EAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120
           EAFTKYGEV+EARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN
Sbjct: 61  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120

Query: 121 DNRPRGFGGGGGYGGGGGGYGGGGY-GGGGGYGAGGGYGAGGGYGGGGGAYGGGGYSGGG 180
           D R RG  GGGGYGGGGGGYGGGGY GGGGGYG GGG   GG YGGGGG+YGGG Y GGG
Sbjct: 121 D-RSRGM-GGGGYGGGGGGYGGGGYGGGGGGYGGGGGGYGGGSYGGGGGSYGGGSYGGGG 180

Query: 181 A-GGNYGRGSGG----------NYSNDYASDNRGSVG--GFGGNDAGYNAASNFASGNTF 240
           + GG YG  SGG          NYS+ + S ++GS G  G GGNDAG NAASNFASGNTF
Sbjct: 181 SGGGGYGGESGGGFGSGFSAGDNYSSSFGSGSQGSGGNYGTGGNDAGSNAASNFASGNTF 240

Query: 241 GSESNAGFG---SGSGGDYFANG-----------SGEGQFGSNETNSMNASGE----EQF 286
           GS ++AGF    S  GGDYFAN            +G  QFGSNE N++NASG+    EQ 
Sbjct: 241 GSGTSAGFDTNVSNGGGDYFANSGSDASSGFGGYTGGDQFGSNEANTLNASGDQGLGEQL 300

[Close]

BLAST of Cmc02g0056341 vs. ExPASy TrEMBL
Match: A0A6J1JKW7 (glycine-rich RNA-binding protein 3, mitochondrial-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485357 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 3.0e-74
Identity = 226/321 (70.40%), Postives = 244/321 (76.01%), Query Frame = 0


Query: 1   MAFLSKFGNILRQGANKRVGLDLHRSSLSLCQAVRWMSSMESSKVFVGGISFSTDDQSLR 60
           MAFLSK GNILRQ ANKR GL+L   SLS+CQAVRWMSSM+SSKVFVGGIS+STDDQSLR
Sbjct: 1   MAFLSKVGNILRQSANKRTGLNLQAPSLSICQAVRWMSSMQSSKVFVGGISYSTDDQSLR 60

Query: 61  EAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120
           EAFTKYGEV+EARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN
Sbjct: 61  EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120

Query: 121 DNRPRGFGG--GGGYGGGGGGYGGGGYGGGGGYGAGGGYGAG-GGYGGGGGAYGGGGYSG 180
           D R RG GG  GGGYGGGGGGYGGGGY GGGGYG GGGYG G GGYGGGGG+Y GG Y G
Sbjct: 121 D-RSRGMGGGYGGGYGGGGGGYGGGGY-GGGGYG-GGGYGGGSGGYGGGGGSYSGGAYGG 180

Query: 181 GGA-GGNYGRGSGG----------NYSNDYASDNRGSVG--GFGGNDAGYNAASNFASGN 240
           GG+ GG YG  SGG          NYS+ +   ++GS G  G GGNDAG N+ASNFASGN
Sbjct: 181 GGSGGGGYGGESGGGFGSGFSTGDNYSSSFGGGSQGSGGNYGTGGNDAGSNSASNFASGN 240

Query: 241 TFGSESNAGFG---SGSGGDYFANG-----------SGEGQFGSN-ETNSMNASGE---- 286
              S ++AGF    S  GGDYFAN            +G  QFGSN E N++NASG+    
Sbjct: 241 ---SGTSAGFDTNVSNGGGDYFANSGSDASSGFGGYTGGDQFGSNDEANTLNASGDQGLG 300

[Close]

BLAST of Cmc02g0056341 vs. TAIR 10
Match: AT5G61030.1 (glycine-rich RNA-binding protein 3 )

HSP 1 Score: 182.2 bits (461), Expect = 5.9e-46
Identity = 175/317 (55.21%), Postives = 201/317 (63.41%), Query Frame = 0


Query: 1   MAFLSKFGNILRQGANKRVGLDLHRSSLSLCQAVRWMSSMESSKVFVGGISFSTDDQSLR 60
           MAFLSKFGNIL+Q  NK++   +  SS SL QA+R MS   SSK+F+GG+++S D+ SLR
Sbjct: 1   MAFLSKFGNILKQTTNKQLNAQVSLSSPSLFQAIRCMS---SSKLFIGGMAYSMDEDSLR 60

Query: 61  EAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120
           EAFTKYGEVV+ RVI+DRETGRSRGFGFVT+TSSE ASSAIQALDG+DLHGR V+VNYAN
Sbjct: 61  EAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAIQALDGRDLHGRVVKVNYAN 120

Query: 121 DNRPRGFGGGGGYGGGGGGYGG-GGYGGG-GGYGAGGGYGAG-GGYGG-GGGAYGG---- 180
           D    G  GGGGYGGGGGGYGG GGYGGG GGYG  GGYG G GGYGG  GG YGG    
Sbjct: 121 DRTSGGGFGGGGYGGGGGGYGGSGGYGGGAGGYGGSGGYGGGAGGYGGNSGGGYGGNAAG 180

Query: 181 -------GGYSG-----GGAGGNYGRGSG-GNYSNDYASDNRGSVGGFGGNDAGYNAASN 240
                  GGY G     GGAGG YG   G G+  N Y   +  S G  G     YN +S 
Sbjct: 181 GYGGSGAGGYGGDATGHGGAGGGYGSSGGFGSSGNTYGEGSSASAGAVG----DYNGSSG 240

Query: 241 FASGNTFGSESNAGFGSGS--GGDYFANGSGEGQFGSNETNSMNASGEEQF--------- 286
           + S NT+GS SN GF   S  GG    N S  G   +  T      GE+QF         
Sbjct: 241 YGSANTYGS-SNGGFAGDSQFGGSPVGNSSQFGGDNTQFTAGGQFGGEDQFGSMEKSETK 300

[Close]

BLAST of Cmc02g0056341 vs. TAIR 10
Match: AT4G13850.1 (glycine-rich RNA-binding protein 2 )

HSP 1 Score: 129.0 bits (323), Expect = 5.9e-30
Identity = 93/181 (51.38%), Postives = 121/181 (66.85%), Query Frame = 0


Query: 1   MAFLSKFGNILRQGANKRVGLDLHRSSLSLCQAVRWMSSMESSKVFVGGISFSTDDQSLR 60
           MAF +K G +LRQ  +    + +     S+  ++R M    S+K+F+GG+S+ TDD SLR
Sbjct: 1   MAFCNKLGGLLRQNISSNGNVPV----TSMLGSLRLM----STKLFIGGLSWGTDDASLR 60

Query: 61  EAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120
           +AF  +G+VV+A+VIVDRETGRSRGFGFV +     A++AI  +DG++L+GR +RVN AN
Sbjct: 61  DAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPAN 120

Query: 121 D--NRPRGFGGGGGYGGGGGGYGGGGYGGGGGYGAGGGYGAGGGYGGGGGAYGGGGYSGG 180
           D  + PR +GGGGGY GGGGGYGGG                GGGYGGGGG YGGGG  GG
Sbjct: 121 DRPSAPRAYGGGGGYSGGGGGYGGG----------------GGGYGGGGGGYGGGGDGGG 157

[Close]

BLAST of Cmc02g0056341 vs. TAIR 10
Match: AT4G13850.3 (glycine-rich RNA-binding protein 2 )

HSP 1 Score: 127.9 bits (320), Expect = 1.3e-29
Identity = 81/151 (53.64%), Postives = 109/151 (72.19%), Query Frame = 0


Query: 1   MAFLSKFGNILRQGANKRVGLDLHRSSLSLCQAVRWMSSMESSKVFVGGISFSTDDQSLR 60
           MAF +K G +LRQ  +    + +     S+  ++R M    S+K+F+GG+S+ TDD SLR
Sbjct: 1   MAFCNKLGGLLRQNISSNGNVPV----TSMLGSLRLM----STKLFIGGLSWGTDDASLR 60

Query: 61  EAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120
           +AF  +G+VV+A+VIVDRETGRSRGFGFV +     A++AI  +DG++L+GR +RVN AN
Sbjct: 61  DAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPAN 120

Query: 121 D--NRPRGFGGGGGYGGGGGGYGGGGYGGGG 150
           D  + PR +GGGGGY GGGGGYGGGG GGGG
Sbjct: 121 DRPSAPRAYGGGGGYSGGGGGYGGGGDGGGG 143

[Close]

BLAST of Cmc02g0056341 vs. TAIR 10
Match: AT1G74230.1 (glycine-rich RNA-binding protein 5 )

HSP 1 Score: 122.1 bits (305), Expect = 7.3e-28
Identity = 149/306 (48.69%), Postives = 178/306 (58.17%), Query Frame = 0


Query: 1   MAFLSKFGNILRQGANKRVGLDLHRSSLSLCQAVRWMSSMESSKVFVGGISFSTDDQSLR 60
           MAFLSK G +  Q ++         +S S+ Q++R MS   SSK+FVGGIS+STD+  LR
Sbjct: 1   MAFLSKVGRLFSQTSSHVT------ASSSMLQSIRCMS---SSKIFVGGISYSTDEFGLR 60

Query: 61  EAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120
           EAF+KYGEVV+A++IVDRETGRSRGF FVT+TS+EEAS+A+Q LDGQDLHGRR+RVNYA 
Sbjct: 61  EAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQ-LDGQDLHGRRIRVNYAT 120

Query: 121 DNRP----RGFGG-GGGYGGGGGGYG--GGGYGGG-GGY----------GAGGGYGAGGG 180
           +       RGFGG GGGYG   GGYG   GGYGGG GGY          G GGGYG    
Sbjct: 121 ERGSGFGGRGFGGPGGGYGASDGGYGAPAGGYGGGAGGYGGNSSYSGNAGGGGGYGGNSS 180

Query: 181 YGGGGGAYGGG-GYSGG--GAGGNYGRGSGGNYSNDYASDNRGSVGGFGGNDAGYNAASN 240
           YGG  G YGG   YSG   G GG YG   GG      A    GS     G+         
Sbjct: 181 YGGNAGGYGGNPPYSGNAVGGGGGYGSNFGGGGGYGVAGGVGGSENFAQGSSTNAGFDDK 240

Query: 241 FASGNTFGSESNAGFGSGSGGDYFANGSGEGQFGSNETNSMNASGEEQFEENARDGDDTD 286
           F S    G++++    SG GGD    GS + QFG  E N    +G   F++      D  
Sbjct: 241 FESNQPLGNDTDHQTESGLGGDEQFGGS-DNQFGDAE-NGNTENGPVGFDQT-----DDG 289

[Close]

BLAST of Cmc02g0056341 vs. TAIR 10
Match: AT4G13850.2 (glycine-rich RNA-binding protein 2 )

HSP 1 Score: 119.8 bits (299), Expect = 3.6e-27
Identity = 85/161 (52.80%), Postives = 114/161 (70.81%), Query Frame = 0


Query: 1   MAFLSKFGNILRQGANKRVGLDLHRSSLSLCQAVRWMSSMESSKVFVGGISFSTDDQSLR 60
           MAF +K G +LRQ  +    + +     S+  ++R M    S+K+F+GG+S+ TDD SLR
Sbjct: 1   MAFCNKLGGLLRQNISSNGNVPV----TSMLGSLRLM----STKLFIGGLSWGTDDASLR 60

Query: 61  EAFTKYGEVVEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120
           +AF  +G+VV+A+VIVDRETGRSRGFGFV +     A++AI  +DG++L+GR +RVN AN
Sbjct: 61  DAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPAN 120

Query: 121 D--NRPRGFGGGGG--YGGGGGGYGGGGYGGGGGYGAGGGY 158
           D  + PR +GGGGG  YGGGGGGYGGGG G GGG   GGG+
Sbjct: 121 DRPSAPRAYGGGGGYSYGGGGGGYGGGGGGYGGGGDGGGGF 153

The following BLAST results are available for this feature:

BLAST of Cmc02g0056341 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008453280.1	8.6e-132	100.00	PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like [Cucumis melo]...	[more]
XP_011648448.2	2.4e-105	86.15	glycine-rich RNA-binding protein blt801 [Cucumis sativus] >KAE8652435.1 hypothet...	[more]
XP_038878732.1	3.8e-87	73.62	glycine-rich RNA-binding protein 3, mitochondrial-like [Benincasa hispida]	[more]
XP_022921902.1	8.5e-79	71.38	glycine-rich RNA-binding protein 3, mitochondrial-like [Cucurbita moschata]	[more]
KAG6589603.1	1.4e-78	70.28	Glycine-rich RNA-binding protein 3, mitochondrial, partial [Cucurbita argyrosper...	[more]

BLAST of Cmc02g0056341 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FNR1	8.3e-45	55.21	Glycine-rich RNA-binding protein 3, mitochondrial OS=Arabidopsis thaliana OX=370...	[more]
Q9SVM8	8.4e-29	51.38	Glycine-rich RNA-binding protein 2, mitochondrial OS=Arabidopsis thaliana OX=370...	[more]
Q9C909	1.0e-26	48.69	Glycine-rich RNA-binding protein 5, mitochondrial OS=Arabidopsis thaliana OX=370...	[more]
Q43472	3.8e-21	57.86	Glycine-rich RNA-binding protein blt801 OS=Hordeum vulgare OX=4513 GN=blt801 PE=...	[more]
Q99070	3.5e-19	57.32	Glycine-rich RNA-binding protein 2 OS=Sorghum bicolor OX=4558 GN=GRP2 PE=2 SV=1	[more]

BLAST of Cmc02g0056341 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UWK3	4.2e-132	100.00	Glycine-rich RNA-binding protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A1S3BVW4	4.2e-132	100.00	glycine-rich RNA-binding protein 2, mitochondrial-like OS=Cucumis melo OX=3656 G...	[more]
A0A0A0LPA9	1.7e-104	85.08	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G013770 PE=4 SV...	[more]
A0A6J1E1P2	4.1e-79	71.38	glycine-rich RNA-binding protein 3, mitochondrial-like OS=Cucurbita moschata OX=...	[more]
A0A6J1JKW7	3.0e-74	70.40	glycine-rich RNA-binding protein 3, mitochondrial-like isoform X1 OS=Cucurbita m...	[more]

BLAST of Cmc02g0056341 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G61030.1	5.9e-46	55.21	glycine-rich RNA-binding protein 3	[more]
AT4G13850.1	5.9e-30	51.38	glycine-rich RNA-binding protein 2	[more]
AT4G13850.3	1.3e-29	53.64	glycine-rich RNA-binding protein 2	[more]
AT1G74230.1	7.3e-28	48.69	glycine-rich RNA-binding protein 5	[more]
AT4G13850.2	3.6e-27	52.80	glycine-rich RNA-binding protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 44..117 e-value: 1.4E-30 score: 117.6
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 45..115 e-value: 1.4E-22 score: 79.3
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 43..121 score: 22.333078
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 33..158 e-value: 1.2E-35 score: 124.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 248..266
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 237..285
None	No IPR available	PANTHER	PTHR48027:SF9	GLYCINE-RICH RNA-BINDING PROTEIN 3, MITOCHONDRIAL	coord: 1..158
None	No IPR available	PANTHER	PTHR48027	HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED	coord: 1..158
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 40..151

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc02g0056341.1	Cmc02g0056341.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0080156	mitochondrial mRNA modification
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:1990904	ribonucleoprotein complex
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding