Cmc02g0053991 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc02g0053991
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Gag/pol protein
Location	CMiso1.1chr02: 21276309 .. 21277214 (+)
RNA-Seq Expression	Cmc02g0053991
Synteny	Cmc02g0053991

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGATTTGGGAGAGGCACAGTTTGTTCTGGGTATTCAGATCTTTAAAGATCGTAAGAACAAAACGCTAGCTTTGTCTCAAGCATCGTATATTGACAAGATAGTTGTTAAATATTCAATGCAAAACTCCAAGAGAGGCTTACTACCTTTCAGGCATGGAGTTACTTTGTCTAAGGAACAGTGCCTTAAGACACCTCAAGAGGTTGAGAAAATGAGACATATCCCCTATGCATCAGCTGTTGGCAGCTTGATGTATGCGATGTTATGTACTAGACCTGACATCTGTTATGCGGTGGGGATAGTCAGTAGATATCAATCTAATCCAGGATTAGCTCATTGGACTGTCGTTAAAACTATTCTCAAGTATCTTAGGAGAACGAGGGACTACATGCTTGTGTATGGTTATAAGGATTTGATTCTTACAAGATACACAGACTCTGATTTTCAGACTGATAGAGATTCTAGGAAATCTACTTCAGGTTCAGTTTTCACTCTTAACGGAGGAGCTGTAGTTTGGAGAAGTATCAAGCAAGGATGTATTGCTGACTCCACCATGGAGGCAGAGTATGTCGCAGCTTGTGAAGCTGCCAAAGAGGCTGTTTAGCTTAGAAACTTCTTGACTGATTTGGAAGTAGTTCCAAACATGTCAAAACCAATTATTCTTTACTGTGATAACAGTGGAGCTGTGGCTAATTCTAGGGAGCCCAGAAGCCACAAGCGTGGAAAGCATATTGAACGCAAGTATCACTTGATTCGAGAGATAGTGCATCGAGGGGACGTGATCGTTACACAGATAGCTTTGACACACAATGTTGTTGATCCATTTACAAAGCCCCTCACGGCTAAGGTGTTTGAGGGTCACCTAGAGAGTCTAGGTCTACGTGACATGCCACATTTAATCTAG

mRNA sequence

ATGAAAGATTTGGGAGAGGCACAGTTTGTTCTGGGTATTCAGATCTTTAAAGATCGTAAGAACAAAACGCTAGCTTTGTCTCAAGCATCGTATATTGACAAGATAGTTGTTAAATATTCAATGCAAAACTCCAAGAGAGGCTTACTACCTTTCAGGCATGGAGTTACTTTGTCTAAGGAACAGTGCCTTAAGACACCTCAAGAGGTTGAGAAAATGAGACATATCCCCTATGCATCAGCTGTTGGCAGCTTGATGTATGCGATGTTATGTACTAGACCTGACATCTGTTATGCGGTGGGGATAGTCAGTAGATATCAATCTAATCCAGGATTAGCTCATTGGACTGTCGTTAAAACTATTCTCAAGTATCTTAGGAGAACGAGGGACTACATGCTTGTGTATGGTTATAAGGATTTGATTCTTACAAGATACACAGACTCTGATTTTCAGACTGATAGAGATTCTAGGAAATCTACTTCAGGTTCAGTTTTCACTCTTAACGGAGGAGCTGTAGTTTGGAGAAGTATCAAGCAAGGATGTATTGCTGACTCCACCATGGAGGCAGATGGAGCTGTGGCTAATTCTAGGGAGCCCAGAAGCCACAAGCGTGGAAAGCATATTGAACGCAAGTATCACTTGATTCGAGAGATAGTGCATCGAGGGGACGTGATCGTTACACAGATAGCTTTGACACACAATGTTGTTGATCCATTTACAAAGCCCCTCACGGCTAAGGTGTTTGAGGGTCACCTAGAGAGTCTAGGTCTACGTGACATGCCACATTTAATCTAG

Coding sequence (CDS)

ATGAAAGATTTGGGAGAGGCACAGTTTGTTCTGGGTATTCAGATCTTTAAAGATCGTAAGAACAAAACGCTAGCTTTGTCTCAAGCATCGTATATTGACAAGATAGTTGTTAAATATTCAATGCAAAACTCCAAGAGAGGCTTACTACCTTTCAGGCATGGAGTTACTTTGTCTAAGGAACAGTGCCTTAAGACACCTCAAGAGGTTGAGAAAATGAGACATATCCCCTATGCATCAGCTGTTGGCAGCTTGATGTATGCGATGTTATGTACTAGACCTGACATCTGTTATGCGGTGGGGATAGTCAGTAGATATCAATCTAATCCAGGATTAGCTCATTGGACTGTCGTTAAAACTATTCTCAAGTATCTTAGGAGAACGAGGGACTACATGCTTGTGTATGGTTATAAGGATTTGATTCTTACAAGATACACAGACTCTGATTTTCAGACTGATAGAGATTCTAGGAAATCTACTTCAGGTTCAGTTTTCACTCTTAACGGAGGAGCTGTAGTTTGGAGAAGTATCAAGCAAGGATGTATTGCTGACTCCACCATGGAGGCAGATGGAGCTGTGGCTAATTCTAGGGAGCCCAGAAGCCACAAGCGTGGAAAGCATATTGAACGCAAGTATCACTTGATTCGAGAGATAGTGCATCGAGGGGACGTGATCGTTACACAGATAGCTTTGACACACAATGTTGTTGATCCATTTACAAAGCCCCTCACGGCTAAGGTGTTTGAGGGTCACCTAGAGAGTCTAGGTCTACGTGACATGCCACATTTAATCTAG

Protein sequence

MKDLGEAQFVLGIQIFKDRKNKTLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCLKTPQEVEKMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTVVKTILKYLRRTRDYMLVYGYKDLILTRYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEADGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIALTHNVVDPFTKPLTAKVFEGHLESLGLRDMPHLI

Homology

[Close]

BLAST of Cmc02g0053991 vs. NCBI nr
Match: TYJ97618.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 485.3 bits (1248), Expect = 3.2e-133
Identity = 250/300 (83.33%), Postives = 254/300 (84.67%), Query Frame = 0


Query: 1    MKDLGEAQFVLGIQIFKDRKNKTLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE 60
            MKDLGEAQFVLGIQIF+DRKNK LALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE
Sbjct: 828  MKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE 887

Query: 61   QCLKTPQEVEKMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTVVKTI 120
            QC KTPQ+VE+MRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWT VKTI
Sbjct: 888  QCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTI 947

Query: 121  LKYLRRTRDYMLVYGYKDLILTRYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGC 180
            LKYLRRTRDY LVYG KDLILT YTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGC
Sbjct: 948  LKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGC 1007

Query: 181  IADSTMEAD--------------------------------------GAVANSREPRSHK 240
            IADSTMEA+                                      GAVANSREPRSHK
Sbjct: 1008 IADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHK 1067

Query: 241  RGKHIERKYHLIREIVHRGDVIVTQIALTHNVVDPFTKPLTAKVFEGHLESLGLRDMPHL 263
            RGKHIERKYHLIREIVHRGDVIVTQIA THNV DPFTKPLTAKVFEGHLESLGLRDMPHL
Sbjct: 1068 RGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHL 1127

[Close]

BLAST of Cmc02g0053991 vs. NCBI nr
Match: KAA0048404.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 485.3 bits (1248), Expect = 3.2e-133
Identity = 250/300 (83.33%), Postives = 254/300 (84.67%), Query Frame = 0


Query: 1    MKDLGEAQFVLGIQIFKDRKNKTLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE 60
            MKDLGEAQFVLGIQIF+DRKNK LALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE
Sbjct: 1042 MKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE 1101

Query: 61   QCLKTPQEVEKMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTVVKTI 120
            QC KTPQ+VE+MRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWT VKTI
Sbjct: 1102 QCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTI 1161

Query: 121  LKYLRRTRDYMLVYGYKDLILTRYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGC 180
            LKYLRRTRDY LVYG KDLILT YTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGC
Sbjct: 1162 LKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGC 1221

Query: 181  IADSTMEAD--------------------------------------GAVANSREPRSHK 240
            IADSTMEA+                                      GAVANSREPRSHK
Sbjct: 1222 IADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHK 1281

Query: 241  RGKHIERKYHLIREIVHRGDVIVTQIALTHNVVDPFTKPLTAKVFEGHLESLGLRDMPHL 263
            RGKHIERKYHLIREIVHRGDVIVTQIA THNV DPFTKPLTAKVFEGHLESLGLRDMPHL
Sbjct: 1282 RGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHL 1341

[Close]

BLAST of Cmc02g0053991 vs. NCBI nr
Match: TYK19524.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 485.3 bits (1248), Expect = 3.2e-133
Identity = 250/300 (83.33%), Postives = 254/300 (84.67%), Query Frame = 0


Query: 1   MKDLGEAQFVLGIQIFKDRKNKTLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE 60
           MKDLGEAQFVLGIQIF+DRKNK LALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE
Sbjct: 1   MKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE 60

Query: 61  QCLKTPQEVEKMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTVVKTI 120
           QC KTPQ+VE+MRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWT VKTI
Sbjct: 61  QCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTI 120

Query: 121 LKYLRRTRDYMLVYGYKDLILTRYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGC 180
           LKYLRRTRDY LVYG KDLILT YTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGC
Sbjct: 121 LKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGC 180

Query: 181 IADSTMEAD--------------------------------------GAVANSREPRSHK 240
           IADSTMEA+                                      GAVANSREPRSHK
Sbjct: 181 IADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHK 240

Query: 241 RGKHIERKYHLIREIVHRGDVIVTQIALTHNVVDPFTKPLTAKVFEGHLESLGLRDMPHL 263
           RGKHIERKYHLIREIVHRGDVIVTQIA THNV DPFTKPLTAKVFEGHLESLGLRDMPHL
Sbjct: 241 RGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHL 300

[Close]

BLAST of Cmc02g0053991 vs. NCBI nr
Match: KAA0035879.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051221.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051893.1 gag/pol protein [Cucumis melo var. makuwa] >TYK00551.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 485.3 bits (1248), Expect = 3.2e-133
Identity = 250/300 (83.33%), Postives = 254/300 (84.67%), Query Frame = 0


Query: 1    MKDLGEAQFVLGIQIFKDRKNKTLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE 60
            MKDLGEAQFVLGIQIF+DRKNK LALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE
Sbjct: 1043 MKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE 1102

Query: 61   QCLKTPQEVEKMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTVVKTI 120
            QC KTPQ+VE+MRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWT VKTI
Sbjct: 1103 QCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTI 1162

Query: 121  LKYLRRTRDYMLVYGYKDLILTRYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGC 180
            LKYLRRTRDY LVYG KDLILT YTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGC
Sbjct: 1163 LKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGC 1222

Query: 181  IADSTMEAD--------------------------------------GAVANSREPRSHK 240
            IADSTMEA+                                      GAVANSREPRSHK
Sbjct: 1223 IADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHK 1282

Query: 241  RGKHIERKYHLIREIVHRGDVIVTQIALTHNVVDPFTKPLTAKVFEGHLESLGLRDMPHL 263
            RGKHIERKYHLIREIVHRGDVIVTQIA THNV DPFTKPLTAKVFEGHLESLGLRDMPHL
Sbjct: 1283 RGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHL 1342

[Close]

BLAST of Cmc02g0053991 vs. NCBI nr
Match: KAA0026233.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 485.3 bits (1248), Expect = 3.2e-133
Identity = 250/300 (83.33%), Postives = 254/300 (84.67%), Query Frame = 0


Query: 1    MKDLGEAQFVLGIQIFKDRKNKTLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE 60
            MKDLGEAQFVLGIQIF+DRKNK LALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE
Sbjct: 902  MKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE 961

Query: 61   QCLKTPQEVEKMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTVVKTI 120
            QC KTPQ+VE+MRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWT VKTI
Sbjct: 962  QCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTI 1021

Query: 121  LKYLRRTRDYMLVYGYKDLILTRYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGC 180
            LKYLRRTRDY LVYG KDLILT YTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGC
Sbjct: 1022 LKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGC 1081

Query: 181  IADSTMEAD--------------------------------------GAVANSREPRSHK 240
            IADSTMEA+                                      GAVANSREPRSHK
Sbjct: 1082 IADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHK 1141

Query: 241  RGKHIERKYHLIREIVHRGDVIVTQIALTHNVVDPFTKPLTAKVFEGHLESLGLRDMPHL 263
            RGKHIERKYHLIREIVHRGDVIVTQIA THNV DPFTKPLTAKVFEGHLESLGLRDMPHL
Sbjct: 1142 RGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHL 1201

[Close]

BLAST of Cmc02g0053991 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 5.0e-52
Identity = 117/291 (40.21%), Postives = 165/291 (56.70%), Query Frame = 0


Query: 1    MKDLGEAQFVLGIQIFKDRKNKTLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE 60
            MKDLG AQ +LG++I ++R ++ L LSQ  YI++++ +++M+N+K    P    + LSK+
Sbjct: 1035 MKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKK 1094

Query: 61   QCLKTPQEVEKMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTVVKTI 120
             C  T +E   M  +PY+SAVGSLMYAM+CTRPDI +AVG+VSR+  NPG  HW  VK I
Sbjct: 1095 MCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWI 1154

Query: 121  LKYLRRTRDYMLVYGYKDLILTRYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGC 180
            L+YLR T    L +G  D IL  YTD+D   D D+RKS++G +FT +GGA+ W+S  Q C
Sbjct: 1155 LRYLRGTTGDCLCFGGSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKC 1214

Query: 181  IADSTMEAD-----------------------------------GAVANSREPRSHKRGK 240
            +A ST EA+                                    A+  S+    H R K
Sbjct: 1215 VALSTTEAEYIAATETGKEMIWLKRFLQELGLHQKEYVVYCDSQSAIDLSKNSMYHARTK 1274

Query: 241  HIERKYHLIREIVHRGDVIVTQIALTHNVVDPFTKPLTAKVFEGHLESLGL 257
            HI+ +YH IRE+V    + V +I+   N  D  TK +    FE   E +G+
Sbjct: 1275 HIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRNKFELCKELVGM 1325

[Close]

BLAST of Cmc02g0053991 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 127.1 bits (318), Expect = 2.9e-28
Identity = 91/301 (30.23%), Postives = 140/301 (46.51%), Query Frame = 0


Query: 1    MKDLGEAQFVLGIQIFKDRKNKTLALSQASYIDKIVVKYSMQNSKRGLLP----FRHGVT 60
            M DL E +  +GI+I  + +   + LSQ++Y+ KI+ K++M+N      P      + + 
Sbjct: 1114 MTDLNEIKHFIGIRI--EMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELL 1173

Query: 61   LSKEQCLKTPQEVEKMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTV 120
             S E C           + P  S +G LMY MLCTRPD+  AV I+SRY S      W  
Sbjct: 1174 NSDEDC-----------NTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQN 1233

Query: 121  VKTILKYLRRTRDYMLVY----GYKDLILTRYTDSDFQTDRDSRKSTSGSVFTL-NGGAV 180
            +K +L+YL+ T D  L++     +++ I+  Y DSD+      RKST+G +F + +   +
Sbjct: 1234 LKRVLRYLKGTIDMKLIFKKNLAFENKII-GYVDSDWAGSEIDRKSTTGYLFKMFDFNLI 1293

Query: 181  VWRSIKQGCIADSTMEAD------------------------------------GAVANS 240
             W + +Q  +A S+ EA+                                    G ++ +
Sbjct: 1294 CWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCISIA 1353

Query: 241  REPRSHKRGKHIERKYHLIREIVHRGDVIVTQIALTHNVVDPFTKPLTAKVFEGHLESLG 257
              P  HKR KHI+ KYH  RE V    + +  I   + + D FTKPL A  F    + LG
Sbjct: 1354 NNPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQLADIFTKPLPAARFVELRDKLG 1400

[Close]

BLAST of Cmc02g0053991 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.1e-22
Identity = 54/117 (46.15%), Postives = 80/117 (68.38%), Query Frame = 0


Query: 72  MRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTVVKTILKYLRRTRDYM 131
           M+++PY SAVG++MY M+ TRPD+  AVG++S++ S+P   HW  +K +L+YL+ T+ Y 
Sbjct: 1   MKNVPYLSAVGAIMYLMVVTRPDLAAAVGVLSQFASDPCPTHWQALKRVLRYLQSTQTYG 60

Query: 132 LVYGYKDLI-LTRYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTME 188
           L +       L  Y+D+D+  D +SR+STSG +F LNGG V WRS KQ  +A S+ E
Sbjct: 61  LEFTRAGTAKLVGYSDADWAGDVESRRSTSGYLFKLNGGCVSWRSKKQRTVALSSTE 117

[Close]

BLAST of Cmc02g0053991 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 2.3e-20
Identity = 82/297 (27.61%), Postives = 122/297 (41.08%), Query Frame = 0


Query: 1    MKDLGEAQFVLGIQIFKDRKNKTLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE 60
            +K+  +  + LGI+    R  + L LSQ  Y   ++ + +M  +K    P      L+  
Sbjct: 1160 VKEHEDLHYFLGIE--AKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLH 1219

Query: 61   QCLKTPQEVEKMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTVVKTI 120
               K P   E      Y   VGSL Y +  TRPD+ YAV  +S+Y   P   HW  +K +
Sbjct: 1220 SGTKLPDPTE------YRGIVGSLQY-LAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRV 1279

Query: 121  LKYLRRTRDY-MLVYGYKDLILTRYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQG 180
            L+YL  T D+ + +     L L  Y+D+D+  D D   ST+G +  L    + W S KQ 
Sbjct: 1280 LRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQK 1339

Query: 181  CIADSTMEAD------------------------------------GAVANSREPRSHKR 240
             +  S+ EA+                                    GA      P  H R
Sbjct: 1340 GVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATYLCANPVFHSR 1399

Query: 241  GKHIERKYHLIREIVHRGDVIVTQIALTHNVVDPFTKPLTAKVFEGHLESLGLRDMP 261
             KHI   YH IR  V  G + V  ++    + D  TKPL+   F+     +G+  +P
Sbjct: 1400 MKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRVAFQNFSRKIGVIKVP 1447

[Close]

BLAST of Cmc02g0053991 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 4.3e-19
Identity = 84/297 (28.28%), Postives = 121/297 (40.74%), Query Frame = 0


Query: 1    MKDLGEAQFVLGIQIFKDRKNKTLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE 60
            +KD  E  + LGI+    R    L LSQ  YI  ++ + +M  +K    P      LS  
Sbjct: 1177 VKDHEELHYFLGIE--AKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLY 1236

Query: 61   QCLKTPQEVEKMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTVVKTI 120
               K     E      Y   VGSL Y +  TRPDI YAV  +S++   P   H   +K I
Sbjct: 1237 SGTKLTDPTE------YRGIVGSLQY-LAFTRPDISYAVNRLSQFMHMPTEEHLQALKRI 1296

Query: 121  LKYLRRTRDY-MLVYGYKDLILTRYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQG 180
            L+YL  T ++ + +     L L  Y+D+D+  D+D   ST+G +  L    + W S KQ 
Sbjct: 1297 LRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQK 1356

Query: 181  CIADSTMEAD------------------------------------GAVANSREPRSHKR 240
             +  S+ EA+                                    GA      P  H R
Sbjct: 1357 GVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYCDNVGATYLCANPVFHSR 1416

Query: 241  GKHIERKYHLIREIVHRGDVIVTQIALTHNVVDPFTKPLTAKVFEGHLESLGLRDMP 261
             KHI   YH IR  V  G + V  ++    + D  TKPL+   F+     +G+  +P
Sbjct: 1417 MKHIAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRTAFQNFASKIGVTRVP 1464

[Close]

BLAST of Cmc02g0053991 vs. ExPASy TrEMBL
Match: A0A5A7SMH8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G002560 PE=4 SV=1)

HSP 1 Score: 485.3 bits (1248), Expect = 1.6e-133
Identity = 250/300 (83.33%), Postives = 254/300 (84.67%), Query Frame = 0


Query: 1    MKDLGEAQFVLGIQIFKDRKNKTLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE 60
            MKDLGEAQFVLGIQIF+DRKNK LALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE
Sbjct: 1043 MKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE 1102

Query: 61   QCLKTPQEVEKMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTVVKTI 120
            QC KTPQ+VE+MRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWT VKTI
Sbjct: 1103 QCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTI 1162

Query: 121  LKYLRRTRDYMLVYGYKDLILTRYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGC 180
            LKYLRRTRDY LVYG KDLILT YTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGC
Sbjct: 1163 LKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGC 1222

Query: 181  IADSTMEAD--------------------------------------GAVANSREPRSHK 240
            IADSTMEA+                                      GAVANSREPRSHK
Sbjct: 1223 IADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHK 1282

Query: 241  RGKHIERKYHLIREIVHRGDVIVTQIALTHNVVDPFTKPLTAKVFEGHLESLGLRDMPHL 263
            RGKHIERKYHLIREIVHRGDVIVTQIA THNV DPFTKPLTAKVFEGHLESLGLRDMPHL
Sbjct: 1283 RGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHL 1342

[Close]

BLAST of Cmc02g0053991 vs. ExPASy TrEMBL
Match: A0A5D3CPJ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00040 PE=4 SV=1)

HSP 1 Score: 485.3 bits (1248), Expect = 1.6e-133
Identity = 250/300 (83.33%), Postives = 254/300 (84.67%), Query Frame = 0


Query: 1    MKDLGEAQFVLGIQIFKDRKNKTLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE 60
            MKDLGEAQFVLGIQIF+DRKNK LALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE
Sbjct: 1043 MKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE 1102

Query: 61   QCLKTPQEVEKMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTVVKTI 120
            QC KTPQ+VE+MRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWT VKTI
Sbjct: 1103 QCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTI 1162

Query: 121  LKYLRRTRDYMLVYGYKDLILTRYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGC 180
            LKYLRRTRDY LVYG KDLILT YTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGC
Sbjct: 1163 LKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGC 1222

Query: 181  IADSTMEAD--------------------------------------GAVANSREPRSHK 240
            IADSTMEA+                                      GAVANSREPRSHK
Sbjct: 1223 IADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHK 1282

Query: 241  RGKHIERKYHLIREIVHRGDVIVTQIALTHNVVDPFTKPLTAKVFEGHLESLGLRDMPHL 263
            RGKHIERKYHLIREIVHRGDVIVTQIA THNV DPFTKPLTAKVFEGHLESLGLRDMPHL
Sbjct: 1283 RGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHL 1342

[Close]

BLAST of Cmc02g0053991 vs. ExPASy TrEMBL
Match: A0A5D3BHG7 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold639G00150 PE=4 SV=1)

HSP 1 Score: 485.3 bits (1248), Expect = 1.6e-133
Identity = 250/300 (83.33%), Postives = 254/300 (84.67%), Query Frame = 0


Query: 1    MKDLGEAQFVLGIQIFKDRKNKTLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE 60
            MKDLGEAQFVLGIQIF+DRKNK LALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE
Sbjct: 828  MKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE 887

Query: 61   QCLKTPQEVEKMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTVVKTI 120
            QC KTPQ+VE+MRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWT VKTI
Sbjct: 888  QCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTI 947

Query: 121  LKYLRRTRDYMLVYGYKDLILTRYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGC 180
            LKYLRRTRDY LVYG KDLILT YTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGC
Sbjct: 948  LKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGC 1007

Query: 181  IADSTMEAD--------------------------------------GAVANSREPRSHK 240
            IADSTMEA+                                      GAVANSREPRSHK
Sbjct: 1008 IADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHK 1067

Query: 241  RGKHIERKYHLIREIVHRGDVIVTQIALTHNVVDPFTKPLTAKVFEGHLESLGLRDMPHL 263
            RGKHIERKYHLIREIVHRGDVIVTQIA THNV DPFTKPLTAKVFEGHLESLGLRDMPHL
Sbjct: 1068 RGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHL 1127

[Close]

BLAST of Cmc02g0053991 vs. ExPASy TrEMBL
Match: A0A5A7TZD7 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G001300 PE=4 SV=1)

HSP 1 Score: 485.3 bits (1248), Expect = 1.6e-133
Identity = 250/300 (83.33%), Postives = 254/300 (84.67%), Query Frame = 0


Query: 1    MKDLGEAQFVLGIQIFKDRKNKTLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE 60
            MKDLGEAQFVLGIQIF+DRKNK LALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE
Sbjct: 1042 MKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE 1101

Query: 61   QCLKTPQEVEKMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTVVKTI 120
            QC KTPQ+VE+MRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWT VKTI
Sbjct: 1102 QCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTI 1161

Query: 121  LKYLRRTRDYMLVYGYKDLILTRYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGC 180
            LKYLRRTRDY LVYG KDLILT YTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGC
Sbjct: 1162 LKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGC 1221

Query: 181  IADSTMEAD--------------------------------------GAVANSREPRSHK 240
            IADSTMEA+                                      GAVANSREPRSHK
Sbjct: 1222 IADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHK 1281

Query: 241  RGKHIERKYHLIREIVHRGDVIVTQIALTHNVVDPFTKPLTAKVFEGHLESLGLRDMPHL 263
            RGKHIERKYHLIREIVHRGDVIVTQIA THNV DPFTKPLTAKVFEGHLESLGLRDMPHL
Sbjct: 1282 RGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHL 1341

[Close]

BLAST of Cmc02g0053991 vs. ExPASy TrEMBL
Match: A0A5A7SNP8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G002160 PE=4 SV=1)

HSP 1 Score: 485.3 bits (1248), Expect = 1.6e-133
Identity = 250/300 (83.33%), Postives = 254/300 (84.67%), Query Frame = 0


Query: 1    MKDLGEAQFVLGIQIFKDRKNKTLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE 60
            MKDLGEAQFVLGIQIF+DRKNK LALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE
Sbjct: 902  MKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE 961

Query: 61   QCLKTPQEVEKMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTVVKTI 120
            QC KTPQ+VE+MRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWT VKTI
Sbjct: 962  QCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTI 1021

Query: 121  LKYLRRTRDYMLVYGYKDLILTRYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGC 180
            LKYLRRTRDY LVYG KDLILT YTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGC
Sbjct: 1022 LKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGC 1081

Query: 181  IADSTMEAD--------------------------------------GAVANSREPRSHK 240
            IADSTMEA+                                      GAVANSREPRSHK
Sbjct: 1082 IADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHK 1141

Query: 241  RGKHIERKYHLIREIVHRGDVIVTQIALTHNVVDPFTKPLTAKVFEGHLESLGLRDMPHL 263
            RGKHIERKYHLIREIVHRGDVIVTQIA THNV DPFTKPLTAKVFEGHLESLGLRDMPHL
Sbjct: 1142 RGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHL 1201

[Close]

BLAST of Cmc02g0053991 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 74.7 bits (182), Expect = 1.2e-13
Identity = 54/190 (28.42%), Postives = 94/190 (49.47%), Query Frame = 0


Query: 1   MKDLGEAQFVLGIQIFKDRKNKTLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE 60
           ++DLG  ++ LG++I   R    + + Q  Y   ++ +  +   K   +P    VT S  
Sbjct: 310 LRDLGPLKYFLGLEI--ARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAH 369

Query: 61  QCLKTPQEVEKMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTVVKTI 120
                    + +    Y   +G LMY  + TR DI +AV  +S++   P LAH   V  I
Sbjct: 370 ------SGGDFVDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKI 429

Query: 121 LKYLRRTRDYMLVYGYK-DLILTRYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQG 180
           L Y++ T    L Y  + ++ L  ++D+ FQ+ +D+R+ST+G    L    + W+S KQ 
Sbjct: 430 LHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQ 489

Query: 181 CIADSTMEAD 190
            ++ S+ EA+
Sbjct: 490 VVSKSSAEAE 490

[Close]

BLAST of Cmc02g0053991 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 73.9 bits (180), Expect = 2.1e-13
Identity = 57/190 (30.00%), Postives = 93/190 (48.95%), Query Frame = 0


Query: 1   MKDLGEAQFVLGIQIFKDRKNKTLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKE 60
           MKDLG   + LGIQI        L LSQ  Y ++I+    M + K    P    + L   
Sbjct: 33  MKDLGPVHYFLGIQI--KTHPSGLFLSQTKYAEQILNNAGMLDCK----PMSTPLPLKLN 92

Query: 61  QCLKTPQEVEKMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTVVKTI 120
             + T +  +      + S VG+L Y  L TRPDI YAV IV +    P LA + ++K +
Sbjct: 93  SSVSTAKYPDPS---DFRSIVGALQYLTL-TRPDISYAVNIVCQRMHEPTLADFDLLKRV 152

Query: 121 LKYLRRTRDY-MLVYGYKDLILTRYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQG 180
           L+Y++ T  + + ++    L +  + DSD+     +R+ST+G    L    + W + +Q 
Sbjct: 153 LRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQP 212

Query: 181 CIADSTMEAD 190
            ++ S+ E +
Sbjct: 213 TVSRSSTETE 212

The following BLAST results are available for this feature:

BLAST of Cmc02g0053991 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ97618.1	3.2e-133	83.33	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0048404.1	3.2e-133	83.33	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYK19524.1	3.2e-133	83.33	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0035879.1	3.2e-133	83.33	gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumi...	[more]
KAA0026233.1	3.2e-133	83.33	gag/pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc02g0053991 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	5.0e-52	40.21	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	2.9e-28	30.23	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P0CV72	1.1e-22	46.15	Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P...	[more]
Q9ZT94	2.3e-20	27.61	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	4.3e-19	28.28	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]

BLAST of Cmc02g0053991 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SMH8	1.6e-133	83.33	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G0025...	[more]
A0A5D3CPJ6	1.6e-133	83.33	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G0004...	[more]
A0A5D3BHG7	1.6e-133	83.33	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold639G0015...	[more]
A0A5A7TZD7	1.6e-133	83.33	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G0013...	[more]
A0A5A7SNP8	1.6e-133	83.33	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G00216...	[more]

BLAST of Cmc02g0053991 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	1.2e-13	28.42	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	2.1e-13	30.00	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 62..163
None	No IPR available	PANTHER	PTHR11439:SF308	SUBFAMILY NOT NAMED	coord: 62..163
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 144..245 e-value: 1.78453E-36 score: 124.503

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc02g0053991.1	Cmc02g0053991.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding