Cmc02g0053381 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc02g0053381
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Gag/pol protein
Location	CMiso1.1chr02: 20803976 .. 20804371 (+)
RNA-Seq Expression	Cmc02g0053381
Synteny	Cmc02g0053381

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTAAAGTCTATAAGGATTCTCTTATCCATCGCCACATTTTATGATTATGAAATATGGCAAATGGATGTCAAGACTGCTTTTCTGAATGGCAATCTTGAAGAGAGTATCTTTATGTCTCAGCCCGAGGGGTTCATAACCCAAGGTCAAGAGCAAAAAGTTTGTAAGCTGAATCGATCCATTTATGGGTTGAAACAAGCATCTAGATCTTGGAACATTAGGTTTGATACTGCGATCAAATCCTACGGTTTTGACCAAAACGTTGATGAACCTTGTGTATATAAGAAAATCAACAAGGGAAAAATAGCTTTCTTAGTACTTTATGTGGACGATATCCTCCTCATTGGAAATGATGTAGGATACCTTACTGATGCTAAAGCTTGGTTAGCAGCCTAA

mRNA sequence

ATGTTAAAGTCTATAAGGATTCTCTTATCCATCGCCACATTTTATGATTATGAAATATGGCAAATGGATGTCAAGACTGCTTTTCTGAATGGCAATCTTGAAGAGAGTATCTTTATGTCTCAGCCCGAGGGGTTCATAACCCAAGGTCAAGAGCAAAAAGTTTGTAAGCTGAATCGATCCATTTATGGGTTGAAACAAGCATCTAGATCTTGGAACATTAGGTTTGATACTGCGATCAAATCCTACGGTTTTGACCAAAACGTTGATGAACCTTGTGTATATAAGAAAATCAACAAGGGAAAAATAGCTTTCTTAGTACTTTATGTGGACGATATCCTCCTCATTGGAAATGATGTAGGATACCTTACTGATGCTAAAGCTTGGTTAGCAGCCTAA

Coding sequence (CDS)

ATGTTAAAGTCTATAAGGATTCTCTTATCCATCGCCACATTTTATGATTATGAAATATGGCAAATGGATGTCAAGACTGCTTTTCTGAATGGCAATCTTGAAGAGAGTATCTTTATGTCTCAGCCCGAGGGGTTCATAACCCAAGGTCAAGAGCAAAAAGTTTGTAAGCTGAATCGATCCATTTATGGGTTGAAACAAGCATCTAGATCTTGGAACATTAGGTTTGATACTGCGATCAAATCCTACGGTTTTGACCAAAACGTTGATGAACCTTGTGTATATAAGAAAATCAACAAGGGAAAAATAGCTTTCTTAGTACTTTATGTGGACGATATCCTCCTCATTGGAAATGATGTAGGATACCTTACTGATGCTAAAGCTTGGTTAGCAGCCTAA

Protein sequence

MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKIAFLVLYVDDILLIGNDVGYLTDAKAWLAA

Homology

[Close]

BLAST of Cmc02g0053381 vs. NCBI nr
Match: TYK15984.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 265.8 bits (678), Expect = 2.0e-67
Identity = 129/131 (98.47%), Postives = 130/131 (99.24%), Query Frame = 0


Query: 1   MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRS 60
           MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRS
Sbjct: 412 MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRS 471

Query: 61  IYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKIAFLVLYVDDILLIGNDVG 120
           IYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGK+AFLVLYVDDILLIGNDVG
Sbjct: 472 IYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVG 531

Query: 121 YLTDAKAWLAA 132
           YLTD KAWLAA
Sbjct: 532 YLTDVKAWLAA 542

[Close]

BLAST of Cmc02g0053381 vs. NCBI nr
Match: KAA0025945.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0035786.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0040492.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0041262.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 265.8 bits (678), Expect = 2.0e-67
Identity = 129/131 (98.47%), Postives = 130/131 (99.24%), Query Frame = 0


Query: 1   MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRS 60
           MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRS
Sbjct: 802 MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRS 861

Query: 61  IYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKIAFLVLYVDDILLIGNDVG 120
           IYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGK+AFLVLYVDDILLIGNDVG
Sbjct: 862 IYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVG 921

Query: 121 YLTDAKAWLAA 132
           YLTD KAWLAA
Sbjct: 922 YLTDVKAWLAA 932

[Close]

BLAST of Cmc02g0053381 vs. NCBI nr
Match: KAA0059226.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 265.8 bits (678), Expect = 2.0e-67
Identity = 129/131 (98.47%), Postives = 130/131 (99.24%), Query Frame = 0


Query: 1   MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRS 60
           MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRS
Sbjct: 676 MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRS 735

Query: 61  IYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKIAFLVLYVDDILLIGNDVG 120
           IYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGK+AFLVLYVDDILLIGNDVG
Sbjct: 736 IYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVG 795

Query: 121 YLTDAKAWLAA 132
           YLTD KAWLAA
Sbjct: 796 YLTDVKAWLAA 806

[Close]

BLAST of Cmc02g0053381 vs. NCBI nr
Match: KAA0035907.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 263.5 bits (672), Expect = 1.0e-66
Identity = 128/131 (97.71%), Postives = 129/131 (98.47%), Query Frame = 0


Query: 1   MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRS 60
           MLKSIRILLSIA FYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRS
Sbjct: 802 MLKSIRILLSIAKFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRS 861

Query: 61  IYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKIAFLVLYVDDILLIGNDVG 120
           IYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGK+AFLVLYVDDILLIGNDVG
Sbjct: 862 IYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVG 921

Query: 121 YLTDAKAWLAA 132
           YLTD KAWLAA
Sbjct: 922 YLTDVKAWLAA 932

[Close]

BLAST of Cmc02g0053381 vs. NCBI nr
Match: KAA0058278.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 263.1 bits (671), Expect = 1.3e-66
Identity = 128/131 (97.71%), Postives = 129/131 (98.47%), Query Frame = 0


Query: 1   MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRS 60
           MLKSIRILLSIATFYDYEIWQMDVKTAFLN NLEESIFMSQPEGFITQGQEQKVCKLNRS
Sbjct: 642 MLKSIRILLSIATFYDYEIWQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRS 701

Query: 61  IYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKIAFLVLYVDDILLIGNDVG 120
           IYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGK+AFLVLYVDDILLIGNDVG
Sbjct: 702 IYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVG 761

Query: 121 YLTDAKAWLAA 132
           YLTD KAWLAA
Sbjct: 762 YLTDVKAWLAA 772

[Close]

BLAST of Cmc02g0053381 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.0e-30
Identity = 63/130 (48.46%), Postives = 91/130 (70.00%), Query Frame = 0


Query: 2    LKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSI 61
            + SIR +LS+A   D E+ Q+DVKTAFL+G+LEE I+M QPEGF   G++  VCKLN+S+
Sbjct: 901  MTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSL 960

Query: 62   YGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVY-KKINKGKIAFLVLYVDDILLIGNDVG 121
            YGLKQA R W ++FD+ +KS  + +   +PCVY K+ ++     L+LYVDD+L++G D G
Sbjct: 961  YGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKG 1020

Query: 122  YLTDAKAWLA 131
             +   K  L+
Sbjct: 1021 LIAKLKGDLS 1030

[Close]

BLAST of Cmc02g0053381 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.1e-20
Identity = 46/115 (40.00%), Postives = 73/115 (63.48%), Query Frame = 0


Query: 4    SIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYG 63
            SIRI+L +A    + I Q+DV  AFL G L + ++MSQP GF+ + +   VC+L ++IYG
Sbjct: 1029 SIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYG 1088

Query: 64   LKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKIAFLVLYVDDILLIGND 119
            LKQA R+W +   T + + GF  ++ +  ++       I ++++YVDDIL+ GND
Sbjct: 1089 LKQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGND 1143

[Close]

BLAST of Cmc02g0053381 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.5e-20
Identity = 47/115 (40.87%), Postives = 72/115 (62.61%), Query Frame = 0


Query: 4    SIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYG 63
            SIRI+L +A    + I Q+DV  AFL G L + ++MSQP GFI + +   VCKL +++YG
Sbjct: 1046 SIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYG 1105

Query: 64   LKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKIAFLVLYVDDILLIGND 119
            LKQA R+W +     + + GF  +V +  ++       I ++++YVDDIL+ GND
Sbjct: 1106 LKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGND 1160

[Close]

BLAST of Cmc02g0053381 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 99.4 bits (246), Expect = 3.3e-20
Identity = 53/131 (40.46%), Postives = 82/131 (62.60%), Query Frame = 0


Query: 2    LKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSI 61
            + S R +LS+   Y+ ++ QMDVKTAFLNG L+E I+M  P+G         VCKLN++I
Sbjct: 981  ISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGI--SCNSDNVCKLNKAI 1040

Query: 62   YGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKI---AFLVLYVDDILLIGND 121
            YGLKQA+R W   F+ A+K   F  +  + C+Y  ++KG I    +++LYVDD+++   D
Sbjct: 1041 YGLKQAARCWFEVFEQALKECEFVNSSVDRCIY-ILDKGNINENIYVLLYVDDVVIATGD 1100

Query: 122  VGYLTDAKAWL 130
            +  + + K +L
Sbjct: 1101 MTRMNNFKRYL 1108

[Close]

BLAST of Cmc02g0053381 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 72.0 bits (175), Expect = 5.6e-12
Identity = 34/93 (36.56%), Postives = 53/93 (56.99%), Query Frame = 0


Query: 22  MDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS 81
           MDV TAFLN  ++E I++ QP GF+ +     V +L   +YGLKQA   WN   +  +K 
Sbjct: 1   MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60

Query: 82  YGFDQNVDEPCVYKKINKGKIAFLVLYVDDILL 115
            GF ++  E  +Y +       ++ +YVDD+L+
Sbjct: 61  IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLV 93

[Close]

BLAST of Cmc02g0053381 vs. ExPASy TrEMBL
Match: A0A5A7TZD0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00090 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 9.7e-68
Identity = 129/131 (98.47%), Postives = 130/131 (99.24%), Query Frame = 0


Query: 1   MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRS 60
           MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRS
Sbjct: 802 MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRS 861

Query: 61  IYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKIAFLVLYVDDILLIGNDVG 120
           IYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGK+AFLVLYVDDILLIGNDVG
Sbjct: 862 IYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVG 921

Query: 121 YLTDAKAWLAA 132
           YLTD KAWLAA
Sbjct: 922 YLTDVKAWLAA 932

[Close]

BLAST of Cmc02g0053381 vs. ExPASy TrEMBL
Match: A0A5D3CYF4 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94G001110 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 9.7e-68
Identity = 129/131 (98.47%), Postives = 130/131 (99.24%), Query Frame = 0


Query: 1   MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRS 60
           MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRS
Sbjct: 412 MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRS 471

Query: 61  IYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKIAFLVLYVDDILLIGNDVG 120
           IYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGK+AFLVLYVDDILLIGNDVG
Sbjct: 472 IYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVG 531

Query: 121 YLTDAKAWLAA 132
           YLTD KAWLAA
Sbjct: 532 YLTDVKAWLAA 542

[Close]

BLAST of Cmc02g0053381 vs. ExPASy TrEMBL
Match: A0A5A7UYE8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001570 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 9.7e-68
Identity = 129/131 (98.47%), Postives = 130/131 (99.24%), Query Frame = 0


Query: 1   MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRS 60
           MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRS
Sbjct: 676 MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRS 735

Query: 61  IYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKIAFLVLYVDDILLIGNDVG 120
           IYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGK+AFLVLYVDDILLIGNDVG
Sbjct: 736 IYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVG 795

Query: 121 YLTDAKAWLAA 132
           YLTD KAWLAA
Sbjct: 796 YLTDVKAWLAA 806

[Close]

BLAST of Cmc02g0053381 vs. ExPASy TrEMBL
Match: A0A5A7T2V9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 4.8e-67
Identity = 128/131 (97.71%), Postives = 129/131 (98.47%), Query Frame = 0


Query: 1   MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRS 60
           MLKSIRILLSIA FYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRS
Sbjct: 802 MLKSIRILLSIAKFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRS 861

Query: 61  IYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKIAFLVLYVDDILLIGNDVG 120
           IYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGK+AFLVLYVDDILLIGNDVG
Sbjct: 862 IYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVG 921

Query: 121 YLTDAKAWLAA 132
           YLTD KAWLAA
Sbjct: 922 YLTDVKAWLAA 932

[Close]

BLAST of Cmc02g0053381 vs. ExPASy TrEMBL
Match: A0A5A7USZ2 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G006070 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 6.3e-67
Identity = 128/131 (97.71%), Postives = 129/131 (98.47%), Query Frame = 0


Query: 1   MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRS 60
           MLKSIRILLSIATFYDYEIWQMDVKTAFLN NLEESIFMSQPEGFITQGQEQKVCKLNRS
Sbjct: 642 MLKSIRILLSIATFYDYEIWQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRS 701

Query: 61  IYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKIAFLVLYVDDILLIGNDVG 120
           IYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGK+AFLVLYVDDILLIGNDVG
Sbjct: 702 IYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVG 761

Query: 121 YLTDAKAWLAA 132
           YLTD KAWLAA
Sbjct: 762 YLTDVKAWLAA 772

[Close]

BLAST of Cmc02g0053381 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 97.8 bits (242), Expect = 6.8e-21
Identity = 48/132 (36.36%), Postives = 80/132 (60.61%), Query Frame = 0


Query: 2   LKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFIT-QGQE---QKVCKL 61
           L S++++L+I+  Y++ + Q+D+  AFLNG+L+E I+M  P G+   QG       VC L
Sbjct: 173 LTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYL 232

Query: 62  NRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKIAFLVLYVDDILLIGN 121
            +SIYGLKQASR W ++F   +  +GF Q+  +   + KI       +++YVDDI++  N
Sbjct: 233 KKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSN 292

Query: 122 DVGYLTDAKAWL 130
           +   + + K+ L
Sbjct: 293 NDAAVDELKSQL 304

The following BLAST results are available for this feature:

BLAST of Cmc02g0053381 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK15984.1	2.0e-67	98.47	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0025945.1	2.0e-67	98.47	gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumi...	[more]
KAA0059226.1	2.0e-67	98.47	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0035907.1	1.0e-66	97.71	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0058278.1	1.3e-66	97.71	gag/pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc02g0053381 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	2.0e-30	48.46	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
Q9ZT94	1.1e-20	40.00	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	1.5e-20	40.87	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P04146	3.3e-20	40.46	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P25600	5.6e-12	36.56	Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT...	[more]

BLAST of Cmc02g0053381 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TZD0	9.7e-68	98.47	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G000...	[more]
A0A5D3CYF4	9.7e-68	98.47	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94G00111...	[more]
A0A5A7UYE8	9.7e-68	98.47	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G0015...	[more]
A0A5A7T2V9	4.8e-67	97.71	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760...	[more]
A0A5A7USZ2	6.3e-67	97.71	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G0060...	[more]

BLAST of Cmc02g0053381 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	6.8e-21	36.36	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 2..130 e-value: 2.5E-37 score: 128.8
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 4..117
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 16..118

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc02g0053381.1	Cmc02g0053381.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding