Cmc02g0052251 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc02g0052251
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Integrase catalytic domain-containing protein
Location	CMiso1.1chr02: 19498407 .. 19498721 (-)
RNA-Seq Expression	Cmc02g0052251
Synteny	Cmc02g0052251

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCTCTCCTGAAGCTCCATATTGGAAAGAGGCTGTGAATAGTGAAATTGAGTCCATTATGCATAACCATACTTGGGAGCTAGTTGATCTTCCATTAGGAAGTAAACCACTTAGTTGTAAATTTTTCAAACGAAAGATGAAGACCGATGAGTCAATAGATAAATATAAGGCAAGACTTGTTGCCAAAGGTTATAAGCAACAAGAAGAACTTGACTATTTTGATACATACTCACCAGTTACTAGAATTACTTCCATTCGCATGCTCATAGCAATATCAGCTTTGCATGGATTTGAGATACATCAGATGGATTAA

mRNA sequence

ATGTTCTCTCCTGAAGCTCCATATTGGAAAGAGGCTGTGAATAGTGAAATTGAGTCCATTATGCATAACCATACTTGGGAGCTAGTTGATCTTCCATTAGGAAGTAAACCACTTAGTTGTAAATTTTTCAAACGAAAGATGAAGACCGATGAGTCAATAGATAAATATAAGGCAAGACTTGTTGCCAAAGGTTATAAGCAACAAGAAGAACTTGACTATTTTGATACATACTCACCAGTTACTAGAATTACTTCCATTCGCATGCTCATAGCAATATCAGCTTTGCATGGATTTGAGATACATCAGATGGATTAA

Coding sequence (CDS)

ATGTTCTCTCCTGAAGCTCCATATTGGAAAGAGGCTGTGAATAGTGAAATTGAGTCCATTATGCATAACCATACTTGGGAGCTAGTTGATCTTCCATTAGGAAGTAAACCACTTAGTTGTAAATTTTTCAAACGAAAGATGAAGACCGATGAGTCAATAGATAAATATAAGGCAAGACTTGTTGCCAAAGGTTATAAGCAACAAGAAGAACTTGACTATTTTGATACATACTCACCAGTTACTAGAATTACTTCCATTCGCATGCTCATAGCAATATCAGCTTTGCATGGATTTGAGATACATCAGATGGATTAA

Protein sequence

MFSPEAPYWKEAVNSEIESIMHNHTWELVDLPLGSKPLSCKFFKRKMKTDESIDKYKARLVAKGYKQQEELDYFDTYSPVTRITSIRMLIAISALHGFEIHQMD

Homology

[Close]

BLAST of Cmc02g0052251 vs. NCBI nr
Match: KAA0062658.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK01192.1 putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 216.9 bits (551), Expect = 8.5e-53
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 1   MFSPEAPYWKEAVNSEIESIMHNHTWELVDLPLGSKPLSCKFFKRKMKTDESIDKYKARL 60
           MFSPEAPYWKEAVNSEIESIMHNHTWELVDLPLGSKPLSCKFFKRKMKTDESIDKYKARL
Sbjct: 1   MFSPEAPYWKEAVNSEIESIMHNHTWELVDLPLGSKPLSCKFFKRKMKTDESIDKYKARL 60

Query: 61  VAKGYKQQEELDYFDTYSPVTRITSIRMLIAISALHGFEIHQMD 105
           VAKGYKQQEELDYFDTYSPVTRITSIRMLIAISALHGFEIHQMD
Sbjct: 61  VAKGYKQQEELDYFDTYSPVTRITSIRMLIAISALHGFEIHQMD 104

[Close]

BLAST of Cmc02g0052251 vs. NCBI nr
Match: KAA0032600.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK20885.1 putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 191.8 bits (486), Expect = 2.9e-45
Identity = 95/105 (90.48%), Postives = 97/105 (92.38%), Query Frame = 0


Query: 1   MFSPEAPYWKEAVNSEIESIMHNHTWELVDLPLGSKPLSCKF-FKRKMKTDESIDKYKAR 60
           M SPEAPYWKEAVNSEIESI+HN TWELVDLPLGS PL CK+ FKRKMKTD SIDKYKAR
Sbjct: 1   MSSPEAPYWKEAVNSEIESIIHNRTWELVDLPLGSTPLGCKWIFKRKMKTDGSIDKYKAR 60

Query: 61  LVAKGYKQQEELDYFDTYSPVTRITSIRMLIAISALHGFEIHQMD 105
           LVAKGYKQQE LDYFDTYSPVTRITSIRMLIAIS LHGFEIHQMD
Sbjct: 61  LVAKGYKQQEGLDYFDTYSPVTRITSIRMLIAISTLHGFEIHQMD 105

[Close]

BLAST of Cmc02g0052251 vs. NCBI nr
Match: KAA0058473.1 (retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa] >TYK07274.1 retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa])

HSP 1 Score: 191.4 bits (485), Expect = 3.8e-45
Identity = 94/105 (89.52%), Postives = 96/105 (91.43%), Query Frame = 0


Query: 1   MFSPEAPYWKEAVNSEIESIMHNHTWELVDLPLGSKPLSCKF-FKRKMKTDESIDKYKAR 60
           M SPEAPYWKE VNSEIESIMHNHTWELVDLPLGSKPL CK+ FKRKMKTD SIDKYKAR
Sbjct: 1   MSSPEAPYWKEVVNSEIESIMHNHTWELVDLPLGSKPLGCKWIFKRKMKTDGSIDKYKAR 60

Query: 61  LVAKGYKQQEELDYFDTYSPVTRITSIRMLIAISALHGFEIHQMD 105
           LV KGYKQQE LDYFDTYSPV+RITSIRM IAIS LHGFEIHQMD
Sbjct: 61  LVTKGYKQQEGLDYFDTYSPVSRITSIRMPIAISTLHGFEIHQMD 105

[Close]

BLAST of Cmc02g0052251 vs. NCBI nr
Match: KAA0049877.1 (retrotransposon protein, putative, Ty1-copia sub-class [Cucumis melo var. makuwa] >TYK07615.1 retrotransposon protein, putative, Ty1-copia sub-class [Cucumis melo var. makuwa])

HSP 1 Score: 187.6 bits (475), Expect = 5.5e-44
Identity = 92/105 (87.62%), Postives = 97/105 (92.38%), Query Frame = 0


Query: 1   MFSPEAPYWKEAVNSEIESIMHNHTWELVDLPLGSKPLSCKF-FKRKMKTDESIDKYKAR 60
           M SP+APYWKEAVNSEIESIMHNHTW+ VDLPLGSK L CK+ FKRKMKTD S+DKYKAR
Sbjct: 1   MSSPKAPYWKEAVNSEIESIMHNHTWKPVDLPLGSKSLGCKWTFKRKMKTDGSVDKYKAR 60

Query: 61  LVAKGYKQQEELDYFDTYSPVTRITSIRMLIAISALHGFEIHQMD 105
           LVAKGYKQQE LDYFDTYSPVTRITSI MLIAISALHGFEIHQM+
Sbjct: 61  LVAKGYKQQEGLDYFDTYSPVTRITSIHMLIAISALHGFEIHQME 105

[Close]

BLAST of Cmc02g0052251 vs. NCBI nr
Match: WP_202958841.1 (hypothetical protein, partial [Solirubrobacter sp. CPCC 204708] >MBE2321234.1 hypothetical protein [Solirubrobacter sp. CPCC 204708])

HSP 1 Score: 177.9 bits (450), Expect = 4.4e-41
Identity = 85/105 (80.95%), Postives = 95/105 (90.48%), Query Frame = 0


Query: 1   MFSPEAPYWKEAVNSEIESIMHNHTWELVDLPLGSKPLSCKF-FKRKMKTDESIDKYKAR 60
           M +PEAP+WKEA+NSEIESIMHNHTWELV+LP GSKPL CK+ FKRKMK D SIDKYKAR
Sbjct: 194 MSTPEAPFWKEAINSEIESIMHNHTWELVNLPQGSKPLGCKWIFKRKMKADGSIDKYKAR 253

Query: 61  LVAKGYKQQEELDYFDTYSPVTRITSIRMLIAISALHGFEIHQMD 105
           LVAKG+KQ+E  DYFDTYSPVTRITS+RMLIAI+A+H  EIHQMD
Sbjct: 254 LVAKGFKQREGEDYFDTYSPVTRITSVRMLIAIAAVHNLEIHQMD 298

[Close]

BLAST of Cmc02g0052251 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 3.5e-17
Identity = 43/98 (43.88%), Postives = 68/98 (69.39%), Query Frame = 0


Query: 9    WKEAVNSEIESIMHNHTWELVDLPLGSKPL-SCKF-FKRKMKTDESIDKYKARLVAKGYK 68
            W++A+ SEI + + NHTW+LV  P  S  +  C++ F +K  +D S+++YKARLVAKGY 
Sbjct: 951  WRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLNRYKARLVAKGYN 1010

Query: 69   QQEELDYFDTYSPVTRITSIRMLIAISALHGFEIHQMD 105
            Q+  LDY +T+SPV + TSIR+++ ++    + I Q+D
Sbjct: 1011 QRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLD 1048

[Close]

BLAST of Cmc02g0052251 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 4.6e-17
Identity = 42/102 (41.18%), Postives = 70/102 (68.63%), Query Frame = 0


Query: 4   PEAPYWKEAVNSEIESIMHNHTWELVDLPLGSKPLSCKF-FKRKMKTDESIDKYKARLVA 63
           PE     +A+  E+ES+  N T++LV+LP G +PL CK+ FK K   D  + +YKARLV 
Sbjct: 821 PEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVV 880

Query: 64  KGYKQQEELDYFDTYSPVTRITSIRMLIAISALHGFEIHQMD 105
           KG++Q++ +D+ + +SPV ++TSIR +++++A    E+ Q+D
Sbjct: 881 KGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLD 922

[Close]

BLAST of Cmc02g0052251 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 1.7e-16
Identity = 42/98 (42.86%), Postives = 66/98 (67.35%), Query Frame = 0


Query: 9    WKEAVNSEIESIMHNHTWELVDLPLGSKPL-SCKF-FKRKMKTDESIDKYKARLVAKGYK 68
            W+ A+ SEI + + NHTW+LV  P     +  C++ F +K  +D S+++YKARLVAKGY 
Sbjct: 968  WRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARLVAKGYN 1027

Query: 69   QQEELDYFDTYSPVTRITSIRMLIAISALHGFEIHQMD 105
            Q+  LDY +T+SPV + TSIR+++ ++    + I Q+D
Sbjct: 1028 QRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLD 1065

[Close]

BLAST of Cmc02g0052251 vs. ExPASy Swiss-Prot
Match: P92520 (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 GN=AtMg00820 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 9.5e-15
Identity = 37/94 (39.36%), Postives = 63/94 (67.02%), Query Frame = 0


Query: 1   MFSPEAPYWKEAVNSEIESIMHNHTWELVDLPLGSKPLSCKF-FKRKMKTDESIDKYKAR 60
           +F+ + P W +A+  E++++  N TW LV  P+    L CK+ FK K+ +D ++D+ KAR
Sbjct: 32  IFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKAR 91

Query: 61  LVAKGYKQQEELDYFDTYSPVTRITSIRMLIAIS 94
           LVAKG+ Q+E + + +TYSPV R  +IR ++ ++
Sbjct: 92  LVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125

[Close]

BLAST of Cmc02g0052251 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 73.2 bits (178), Expect = 2.0e-12
Identity = 33/97 (34.02%), Postives = 61/97 (62.89%), Query Frame = 0


Query: 9    WKEAVNSEIESIMHNHTWELVDLPLGSKPLSCKF-FKRKMKTDESIDKYKARLVAKGYKQ 68
            W+EA+N+E+ +   N+TW +   P     +  ++ F  K     +  +YKARLVA+G+ Q
Sbjct: 906  WEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQ 965

Query: 69   QEELDYFDTYSPVTRITSIRMLIAISALHGFEIHQMD 105
            + ++DY +T++PV RI+S R ++++   +  ++HQMD
Sbjct: 966  KYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMD 1002

[Close]

BLAST of Cmc02g0052251 vs. ExPASy TrEMBL
Match: A0A5A7V4X9 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2044G00380 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 4.1e-53
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 1   MFSPEAPYWKEAVNSEIESIMHNHTWELVDLPLGSKPLSCKFFKRKMKTDESIDKYKARL 60
           MFSPEAPYWKEAVNSEIESIMHNHTWELVDLPLGSKPLSCKFFKRKMKTDESIDKYKARL
Sbjct: 1   MFSPEAPYWKEAVNSEIESIMHNHTWELVDLPLGSKPLSCKFFKRKMKTDESIDKYKARL 60

Query: 61  VAKGYKQQEELDYFDTYSPVTRITSIRMLIAISALHGFEIHQMD 105
           VAKGYKQQEELDYFDTYSPVTRITSIRMLIAISALHGFEIHQMD
Sbjct: 61  VAKGYKQQEELDYFDTYSPVTRITSIRMLIAISALHGFEIHQMD 104

[Close]

BLAST of Cmc02g0052251 vs. ExPASy TrEMBL
Match: A0A5A7SP25 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold284G00190 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.4e-45
Identity = 95/105 (90.48%), Postives = 97/105 (92.38%), Query Frame = 0


Query: 1   MFSPEAPYWKEAVNSEIESIMHNHTWELVDLPLGSKPLSCKF-FKRKMKTDESIDKYKAR 60
           M SPEAPYWKEAVNSEIESI+HN TWELVDLPLGS PL CK+ FKRKMKTD SIDKYKAR
Sbjct: 1   MSSPEAPYWKEAVNSEIESIIHNRTWELVDLPLGSTPLGCKWIFKRKMKTDGSIDKYKAR 60

Query: 61  LVAKGYKQQEELDYFDTYSPVTRITSIRMLIAISALHGFEIHQMD 105
           LVAKGYKQQE LDYFDTYSPVTRITSIRMLIAIS LHGFEIHQMD
Sbjct: 61  LVAKGYKQQEGLDYFDTYSPVTRITSIRMLIAISTLHGFEIHQMD 105

[Close]

BLAST of Cmc02g0052251 vs. ExPASy TrEMBL
Match: A0A5D3C7R1 (Retrotransposon protein, putative, Ty1-copia subclass OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold606G001740 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.9e-45
Identity = 94/105 (89.52%), Postives = 96/105 (91.43%), Query Frame = 0


Query: 1   MFSPEAPYWKEAVNSEIESIMHNHTWELVDLPLGSKPLSCKF-FKRKMKTDESIDKYKAR 60
           M SPEAPYWKE VNSEIESIMHNHTWELVDLPLGSKPL CK+ FKRKMKTD SIDKYKAR
Sbjct: 1   MSSPEAPYWKEVVNSEIESIMHNHTWELVDLPLGSKPLGCKWIFKRKMKTDGSIDKYKAR 60

Query: 61  LVAKGYKQQEELDYFDTYSPVTRITSIRMLIAISALHGFEIHQMD 105
           LV KGYKQQE LDYFDTYSPV+RITSIRM IAIS LHGFEIHQMD
Sbjct: 61  LVTKGYKQQEGLDYFDTYSPVSRITSIRMPIAISTLHGFEIHQMD 105

[Close]

BLAST of Cmc02g0052251 vs. ExPASy TrEMBL
Match: A0A5A7U6A4 (Retrotransposon protein, putative, Ty1-copia sub-class OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold105G00120 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 2.7e-44
Identity = 92/105 (87.62%), Postives = 97/105 (92.38%), Query Frame = 0


Query: 1   MFSPEAPYWKEAVNSEIESIMHNHTWELVDLPLGSKPLSCKF-FKRKMKTDESIDKYKAR 60
           M SP+APYWKEAVNSEIESIMHNHTW+ VDLPLGSK L CK+ FKRKMKTD S+DKYKAR
Sbjct: 1   MSSPKAPYWKEAVNSEIESIMHNHTWKPVDLPLGSKSLGCKWTFKRKMKTDGSVDKYKAR 60

Query: 61  LVAKGYKQQEELDYFDTYSPVTRITSIRMLIAISALHGFEIHQMD 105
           LVAKGYKQQE LDYFDTYSPVTRITSI MLIAISALHGFEIHQM+
Sbjct: 61  LVAKGYKQQEGLDYFDTYSPVTRITSIHMLIAISALHGFEIHQME 105

[Close]

BLAST of Cmc02g0052251 vs. ExPASy TrEMBL
Match: A0A2Z7APY0 (Uncharacterized protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_22499 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 3.4e-39
Identity = 82/103 (79.61%), Postives = 91/103 (88.35%), Query Frame = 0


Query: 3   SPEAPYWKEAVNSEIESIMHNHTWELVDLPLGSKPLSCKF-FKRKMKTDESIDKYKARLV 62
           SP+AP WKEAVNSEIESIMHNHTWELVDLP G+KPL CK+  KRK K D +IDKYKARLV
Sbjct: 729 SPDAPLWKEAVNSEIESIMHNHTWELVDLPPGTKPLGCKWILKRKYKADGTIDKYKARLV 788

Query: 63  AKGYKQQEELDYFDTYSPVTRITSIRMLIAISALHGFEIHQMD 105
           AKG++Q+E +DYFDTYSPVTRITSIRM IAI+ALH  EIHQMD
Sbjct: 789 AKGFRQKEGIDYFDTYSPVTRITSIRMFIAIAALHDLEIHQMD 831

[Close]

BLAST of Cmc02g0052251 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 107.1 bits (266), Expect = 8.8e-24
Identity = 46/97 (47.42%), Postives = 73/97 (75.26%), Query Frame = 0


Query: 9   WKEAVNSEIESIMHNHTWELVDLPLGSKPLSCKF-FKRKMKTDESIDKYKARLVAKGYKQ 68
           W  A++ EI ++   HTWE+  LP   KP+ CK+ +K K  +D +I++YKARLVAKGY Q
Sbjct: 98  WCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQ 157

Query: 69  QEELDYFDTYSPVTRITSIRMLIAISALHGFEIHQMD 105
           QE +D+ +T+SPV ++TS+++++AISA++ F +HQ+D
Sbjct: 158 QEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLD 194

[Close]

BLAST of Cmc02g0052251 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 80.9 bits (198), Expect = 6.8e-16
Identity = 37/94 (39.36%), Postives = 63/94 (67.02%), Query Frame = 0


Query: 1   MFSPEAPYWKEAVNSEIESIMHNHTWELVDLPLGSKPLSCKF-FKRKMKTDESIDKYKAR 60
           +F+ + P W +A+  E++++  N TW LV  P+    L CK+ FK K+ +D ++D+ KAR
Sbjct: 32  IFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKAR 91

Query: 61  LVAKGYKQQEELDYFDTYSPVTRITSIRMLIAIS 94
           LVAKG+ Q+E + + +TYSPV R  +IR ++ ++
Sbjct: 92  LVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125

The following BLAST results are available for this feature:

BLAST of Cmc02g0052251 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0062658.1	8.5e-53	100.00	putative mitochondrial protein [Cucumis melo var. makuwa] >TYK01192.1 putative m...	[more]
KAA0032600.1	2.9e-45	90.48	putative mitochondrial protein [Cucumis melo var. makuwa] >TYK20885.1 putative m...	[more]
KAA0058473.1	3.8e-45	89.52	retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa]...	[more]
KAA0049877.1	5.5e-44	87.62	retrotransposon protein, putative, Ty1-copia sub-class [Cucumis melo var. makuwa...	[more]
WP_202958841.1	4.4e-41	80.95	hypothetical protein, partial [Solirubrobacter sp. CPCC 204708] >MBE2321234.1 hy...	[more]

BLAST of Cmc02g0052251 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZT94	3.5e-17	43.88	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P10978	4.6e-17	41.18	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
Q94HW2	1.7e-16	42.86	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P92520	9.5e-15	39.36	Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 ...	[more]
P04146	2.0e-12	34.02	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]

BLAST of Cmc02g0052251 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V4X9	4.1e-53	100.00	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5A7SP25	1.4e-45	90.48	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5D3C7R1	1.9e-45	89.52	Retrotransposon protein, putative, Ty1-copia subclass OS=Cucumis melo var. makuw...	[more]
A0A5A7U6A4	2.7e-44	87.62	Retrotransposon protein, putative, Ty1-copia sub-class OS=Cucumis melo var. maku...	[more]
A0A2Z7APY0	3.4e-39	79.61	Uncharacterized protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_22499 PE=4...	[more]

BLAST of Cmc02g0052251 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	8.8e-24	47.42	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00820.1	6.8e-16	39.36	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 23..104 e-value: 1.1E-21 score: 77.6
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 5..104

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc02g0052251.1	Cmc02g0052251.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding