Cmc02g0050691 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc02g0050691
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr02: 16969512 .. 16970372 (+)
RNA-Seq Expression	Cmc02g0050691
Synteny	Cmc02g0050691

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTTATTACGGGACTGCCCAAGACCCTAAGGGGCTACACGGTGATCTGGGTTGTGGTCGACAGACTCACGAAGTCGGCCCATTTCGTGCCAGGGAAATCCACTTACACTGCCAGTAAGTGGGGGCAGCTATATATGACAGAGATTGTGAGACTACATGGAGTACCCGTATCCATCATTTCAGACAGAGACGCCCGTTTCACATCGAAGTTCTGGAAAGGACTTCAACTTGGATTAGGTACGAGGTTGGACTTCAGCACGGCATTCCACCCTCAGACTGATGGTCAGACAGAGAGATTGAACCAGATTTTGGAGGACATGCTGCGAGCCTGCGTACTAGAGTTTTCAGGAAGTTGGGACTCCCATCTGCATCTGATGGAGTTTGCCTATAACAACAGCTACCAGGCTACCATCGGTATGGCACCGTTCGAGGCTCTGTATGGCAAGTGCTGTAGATCCCCTGTCTGCTGGGGCGAGGTTGGAGAGCAGAGGATGCTAGGCCCCGAGTTAGTGCAGACGACCAACGCAGCCATACAGAAGATCCGAGCTCGTATGCTGACAACCCAGAGCAGACAGAAGAGTTACGCTGATATACGACGTAAGGACCTCGAGTTTGAAGTGGGAGATATGGTCTTTCTGAAGGTTGCACCCATGAAGGGTGTTCTGAGGTTCGCGAAGAAGGGGAAGCTGAGTCCACGCTTCGTAGGGCCGTTCGAGATATTGGAGCGGATTGGCCCCGTGGCTTACCGCTTGGCGCTACCCCCATCTTTTGCTGCAGTGCACGACGTGTTCCATATCTCCATGCTGAGGAAATATGTCGCAGACCCAACACATGTGGTGGACTTCGAACCACTGTAG

mRNA sequence

ATGGATTTTATTACGGGACTGCCCAAGACCCTAAGGGGCTACACGGTGATCTGGGTTGTGGTCGACAGACTCACGAAGTCGGCCCATTTCGTGCCAGGGAAATCCACTTACACTGCCAGTAAGTGGGGGCAGCTATATATGACAGAGATTGTGAGACTACATGGAGTACCCGTATCCATCATTTCAGACAGAGACGCCCGTTTCACATCGAAGTTCTGGAAAGGACTTCAACTTGGATTAGGTACGAGGTTGGACTTCAGCACGGCATTCCACCCTCAGACTGATGGTCAGACAGAGAGATTGAACCAGATTTTGGAGGACATGCTGCGAGCCTGCGTACTAGAGTTTTCAGGAAGTTGGGACTCCCATCTGCATCTGATGGAGTTTGCCTATAACAACAGCTACCAGGCTACCATCGGTATGGCACCGTTCGAGGCTCTGTATGGCAAGTGCTGTAGATCCCCTGTCTGCTGGGGCGAGGTTGGAGAGCAGAGGATGCTAGGCCCCGAGTTAGTGCAGACGACCAACGCAGCCATACAGAAGATCCGAGCTCGTATGCTGACAACCCAGAGCAGACAGAAGAGTTACGCTGATATACGACGTAAGGACCTCGAGTTTGAAGTGGGAGATATGGTCTTTCTGAAGGTTGCACCCATGAAGGGTGTTCTGAGGTTCGCGAAGAAGGGGAAGCTGAGTCCACGCTTCGTAGGGCCGTTCGAGATATTGGAGCGGATTGGCCCCGTGGCTTACCGCTTGGCGCTACCCCCATCTTTTGCTGCAGTGCACGACGTGTTCCATATCTCCATGCTGAGGAAATATGTCGCAGACCCAACACATGTGGTGGACTTCGAACCACTGTAG

Coding sequence (CDS)

ATGGATTTTATTACGGGACTGCCCAAGACCCTAAGGGGCTACACGGTGATCTGGGTTGTGGTCGACAGACTCACGAAGTCGGCCCATTTCGTGCCAGGGAAATCCACTTACACTGCCAGTAAGTGGGGGCAGCTATATATGACAGAGATTGTGAGACTACATGGAGTACCCGTATCCATCATTTCAGACAGAGACGCCCGTTTCACATCGAAGTTCTGGAAAGGACTTCAACTTGGATTAGGTACGAGGTTGGACTTCAGCACGGCATTCCACCCTCAGACTGATGGTCAGACAGAGAGATTGAACCAGATTTTGGAGGACATGCTGCGAGCCTGCGTACTAGAGTTTTCAGGAAGTTGGGACTCCCATCTGCATCTGATGGAGTTTGCCTATAACAACAGCTACCAGGCTACCATCGGTATGGCACCGTTCGAGGCTCTGTATGGCAAGTGCTGTAGATCCCCTGTCTGCTGGGGCGAGGTTGGAGAGCAGAGGATGCTAGGCCCCGAGTTAGTGCAGACGACCAACGCAGCCATACAGAAGATCCGAGCTCGTATGCTGACAACCCAGAGCAGACAGAAGAGTTACGCTGATATACGACGTAAGGACCTCGAGTTTGAAGTGGGAGATATGGTCTTTCTGAAGGTTGCACCCATGAAGGGTGTTCTGAGGTTCGCGAAGAAGGGGAAGCTGAGTCCACGCTTCGTAGGGCCGTTCGAGATATTGGAGCGGATTGGCCCCGTGGCTTACCGCTTGGCGCTACCCCCATCTTTTGCTGCAGTGCACGACGTGTTCCATATCTCCATGCTGAGGAAATATGTCGCAGACCCAACACATGTGGTGGACTTCGAACCACTGTAG

Protein sequence

MDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLGLGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTTQSRQKSYADIRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPL

Homology

[Close]

BLAST of Cmc02g0050691 vs. NCBI nr
Match: KAA0036007.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 588.2 bits (1515), Expect = 3.9e-164
Identity = 286/286 (100.00%), Postives = 286/286 (100.00%), Query Frame = 0


Query: 1   MDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI 60
           MDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI
Sbjct: 223 MDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI 282

Query: 61  ISDRDARFTSKFWKGLQLGLGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW 120
           ISDRDARFTSKFWKGLQLGLGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW
Sbjct: 283 ISDRDARFTSKFWKGLQLGLGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW 342

Query: 121 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQ 180
           DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQ
Sbjct: 343 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQ 402

Query: 181 KIRARMLTTQSRQKSYADIRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFE 240
           KIRARMLTTQSRQKSYADIRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFE
Sbjct: 403 KIRARMLTTQSRQKSYADIRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFE 462

Query: 241 ILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPL 287
           ILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPL
Sbjct: 463 ILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPL 508

[Close]

BLAST of Cmc02g0050691 vs. NCBI nr
Match: KAA0031437.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 583.6 bits (1503), Expect = 9.5e-163
Identity = 283/286 (98.95%), Postives = 284/286 (99.30%), Query Frame = 0


Query: 1    MDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI 60
            MDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI
Sbjct: 1129 MDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI 1188

Query: 61   ISDRDARFTSKFWKGLQLGLGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW 120
            ISDRDARFTSKFWKGLQL LGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW
Sbjct: 1189 ISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW 1248

Query: 121  DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQ 180
            DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQ
Sbjct: 1249 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQ 1308

Query: 181  KIRARMLTTQSRQKSYADIRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFE 240
            KIRARMLT QSRQKSYAD+RRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFE
Sbjct: 1309 KIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFE 1368

Query: 241  ILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPL 287
            ILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPL
Sbjct: 1369 ILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPL 1414

[Close]

BLAST of Cmc02g0050691 vs. NCBI nr
Match: KAA0033825.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 583.6 bits (1503), Expect = 9.5e-163
Identity = 283/286 (98.95%), Postives = 284/286 (99.30%), Query Frame = 0


Query: 1    MDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI 60
            MDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI
Sbjct: 1793 MDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI 1852

Query: 61   ISDRDARFTSKFWKGLQLGLGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW 120
            ISDRDARFTSKFWKGLQL LGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW
Sbjct: 1853 ISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW 1912

Query: 121  DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQ 180
            DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQ
Sbjct: 1913 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQ 1972

Query: 181  KIRARMLTTQSRQKSYADIRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFE 240
            KIRARMLT QSRQKSYAD+RRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFE
Sbjct: 1973 KIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFE 2032

Query: 241  ILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPL 287
            ILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPL
Sbjct: 2033 ILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPL 2078

[Close]

BLAST of Cmc02g0050691 vs. NCBI nr
Match: KAA0025848.1 (pol protein [Cucumis melo var. makuwa] >KAA0035212.1 pol protein [Cucumis melo var. makuwa] >KAA0036593.1 pol protein [Cucumis melo var. makuwa] >KAA0036739.1 pol protein [Cucumis melo var. makuwa] >KAA0037408.1 pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 583.6 bits (1503), Expect = 9.5e-163
Identity = 283/286 (98.95%), Postives = 284/286 (99.30%), Query Frame = 0


Query: 1    MDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI 60
            MDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI
Sbjct: 1188 MDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI 1247

Query: 61   ISDRDARFTSKFWKGLQLGLGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW 120
            ISDRDARFTSKFWKGLQL LGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW
Sbjct: 1248 ISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW 1307

Query: 121  DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQ 180
            DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQ
Sbjct: 1308 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQ 1367

Query: 181  KIRARMLTTQSRQKSYADIRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFE 240
            KIRARMLT QSRQKSYAD+RRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFE
Sbjct: 1368 KIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFE 1427

Query: 241  ILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPL 287
            ILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPL
Sbjct: 1428 ILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPL 1473

[Close]

BLAST of Cmc02g0050691 vs. NCBI nr
Match: TYK28422.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 583.6 bits (1503), Expect = 9.5e-163
Identity = 283/286 (98.95%), Postives = 284/286 (99.30%), Query Frame = 0


Query: 1    MDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI 60
            MDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI
Sbjct: 1539 MDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI 1598

Query: 61   ISDRDARFTSKFWKGLQLGLGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW 120
            ISDRDARFTSKFWKGLQL LGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW
Sbjct: 1599 ISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW 1658

Query: 121  DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQ 180
            DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQ
Sbjct: 1659 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQ 1718

Query: 181  KIRARMLTTQSRQKSYADIRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFE 240
            KIRARMLT QSRQKSYAD+RRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFE
Sbjct: 1719 KIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFE 1778

Query: 241  ILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPL 287
            ILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPL
Sbjct: 1779 ILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPL 1824

[Close]

BLAST of Cmc02g0050691 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.0e-38
Identity = 98/276 (35.51%), Postives = 145/276 (52.54%), Query Frame = 0


Query: 1    MDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI 60
            MDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +++   ++   G P  I
Sbjct: 989  MDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEI 1048

Query: 61   ISDRDARFTSKFWKGLQLGLGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW 120
            I+D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR        +W
Sbjct: 1049 IADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTW 1108

Query: 121  DSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAI 180
              H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T    
Sbjct: 1109 VDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL---ELPSFSDKTDENSQETIQVF 1168

Query: 181  QKIRARMLTTQSRQKSYADIRRKDL-EFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGP 240
            Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G L   K  KL+P F GP
Sbjct: 1169 QTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFLH--KSNKLAPSFAGP 1228

Query: 241  FEILERIGPVAYRLALPPSFAAV-HDVFHISMLRKY 274
            F +L++ GP  Y L LP S   +    FH+S L KY
Sbjct: 1229 FYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of Cmc02g0050691 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.0e-38
Identity = 98/276 (35.51%), Postives = 145/276 (52.54%), Query Frame = 0


Query: 1    MDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI 60
            MDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +++   ++   G P  I
Sbjct: 989  MDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEI 1048

Query: 61   ISDRDARFTSKFWKGLQLGLGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW 120
            I+D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR        +W
Sbjct: 1049 IADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTW 1108

Query: 121  DSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAI 180
              H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T    
Sbjct: 1109 VDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL---ELPSFSDKTDENSQETIQVF 1168

Query: 181  QKIRARMLTTQSRQKSYADIRRKDL-EFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGP 240
            Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G L   K  KL+P F GP
Sbjct: 1169 QTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFLH--KSNKLAPSFAGP 1228

Query: 241  FEILERIGPVAYRLALPPSFAAV-HDVFHISMLRKY 274
            F +L++ GP  Y L LP S   +    FH+S L KY
Sbjct: 1229 FYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of Cmc02g0050691 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.0e-38
Identity = 98/276 (35.51%), Postives = 145/276 (52.54%), Query Frame = 0


Query: 1    MDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI 60
            MDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +++   ++   G P  I
Sbjct: 989  MDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEI 1048

Query: 61   ISDRDARFTSKFWKGLQLGLGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW 120
            I+D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR        +W
Sbjct: 1049 IADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTW 1108

Query: 121  DSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAI 180
              H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T    
Sbjct: 1109 VDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL---ELPSFSDKTDENSQETIQVF 1168

Query: 181  QKIRARMLTTQSRQKSYADIRRKDL-EFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGP 240
            Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G L   K  KL+P F GP
Sbjct: 1169 QTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFLH--KSNKLAPSFAGP 1228

Query: 241  FEILERIGPVAYRLALPPSFAAV-HDVFHISMLRKY 274
            F +L++ GP  Y L LP S   +    FH+S L KY
Sbjct: 1229 FYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of Cmc02g0050691 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.0e-38
Identity = 98/276 (35.51%), Postives = 145/276 (52.54%), Query Frame = 0


Query: 1    MDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI 60
            MDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +++   ++   G P  I
Sbjct: 989  MDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEI 1048

Query: 61   ISDRDARFTSKFWKGLQLGLGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW 120
            I+D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR        +W
Sbjct: 1049 IADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTW 1108

Query: 121  DSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAI 180
              H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T    
Sbjct: 1109 VDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL---ELPSFSDKTDENSQETIQVF 1168

Query: 181  QKIRARMLTTQSRQKSYADIRRKDL-EFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGP 240
            Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G L   K  KL+P F GP
Sbjct: 1169 QTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFLH--KSNKLAPSFAGP 1228

Query: 241  FEILERIGPVAYRLALPPSFAAV-HDVFHISMLRKY 274
            F +L++ GP  Y L LP S   +    FH+S L KY
Sbjct: 1229 FYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of Cmc02g0050691 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.0e-38
Identity = 98/276 (35.51%), Postives = 145/276 (52.54%), Query Frame = 0


Query: 1    MDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI 60
            MDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +++   ++   G P  I
Sbjct: 989  MDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEI 1048

Query: 61   ISDRDARFTSKFWKGLQLGLGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW 120
            I+D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR        +W
Sbjct: 1049 IADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTW 1108

Query: 121  DSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAI 180
              H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T    
Sbjct: 1109 VDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL---ELPSFSDKTDENSQETIQVF 1168

Query: 181  QKIRARMLTTQSRQKSYADIRRKDL-EFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGP 240
            Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G L   K  KL+P F GP
Sbjct: 1169 QTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFLH--KSNKLAPSFAGP 1228

Query: 241  FEILERIGPVAYRLALPPSFAAV-HDVFHISMLRKY 274
            F +L++ GP  Y L LP S   +    FH+S L KY
Sbjct: 1229 FYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of Cmc02g0050691 vs. ExPASy TrEMBL
Match: A0A5A7T356 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4864G00010 PE=4 SV=1)

HSP 1 Score: 588.2 bits (1515), Expect = 1.9e-164
Identity = 286/286 (100.00%), Postives = 286/286 (100.00%), Query Frame = 0


Query: 1   MDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI 60
           MDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI
Sbjct: 223 MDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI 282

Query: 61  ISDRDARFTSKFWKGLQLGLGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW 120
           ISDRDARFTSKFWKGLQLGLGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW
Sbjct: 283 ISDRDARFTSKFWKGLQLGLGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW 342

Query: 121 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQ 180
           DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQ
Sbjct: 343 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQ 402

Query: 181 KIRARMLTTQSRQKSYADIRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFE 240
           KIRARMLTTQSRQKSYADIRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFE
Sbjct: 403 KIRARMLTTQSRQKSYADIRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFE 462

Query: 241 ILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPL 287
           ILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPL
Sbjct: 463 ILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPL 508

[Close]

BLAST of Cmc02g0050691 vs. ExPASy TrEMBL
Match: A0A5D3CQB5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001420 PE=4 SV=1)

HSP 1 Score: 583.6 bits (1503), Expect = 4.6e-163
Identity = 283/286 (98.95%), Postives = 284/286 (99.30%), Query Frame = 0


Query: 1    MDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI 60
            MDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI
Sbjct: 1188 MDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI 1247

Query: 61   ISDRDARFTSKFWKGLQLGLGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW 120
            ISDRDARFTSKFWKGLQL LGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW
Sbjct: 1248 ISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW 1307

Query: 121  DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQ 180
            DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQ
Sbjct: 1308 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQ 1367

Query: 181  KIRARMLTTQSRQKSYADIRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFE 240
            KIRARMLT QSRQKSYAD+RRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFE
Sbjct: 1368 KIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFE 1427

Query: 241  ILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPL 287
            ILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPL
Sbjct: 1428 ILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPL 1473

[Close]

BLAST of Cmc02g0050691 vs. ExPASy TrEMBL
Match: A0A5A7UBS1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13G00110 PE=4 SV=1)

HSP 1 Score: 583.6 bits (1503), Expect = 4.6e-163
Identity = 283/286 (98.95%), Postives = 284/286 (99.30%), Query Frame = 0


Query: 1    MDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI 60
            MDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI
Sbjct: 1188 MDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI 1247

Query: 61   ISDRDARFTSKFWKGLQLGLGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW 120
            ISDRDARFTSKFWKGLQL LGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW
Sbjct: 1248 ISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW 1307

Query: 121  DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQ 180
            DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQ
Sbjct: 1308 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQ 1367

Query: 181  KIRARMLTTQSRQKSYADIRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFE 240
            KIRARMLT QSRQKSYAD+RRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFE
Sbjct: 1368 KIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFE 1427

Query: 241  ILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPL 287
            ILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPL
Sbjct: 1428 ILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPL 1473

[Close]

BLAST of Cmc02g0050691 vs. ExPASy TrEMBL
Match: A0A5A7TEQ2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G00410 PE=4 SV=1)

HSP 1 Score: 583.6 bits (1503), Expect = 4.6e-163
Identity = 283/286 (98.95%), Postives = 284/286 (99.30%), Query Frame = 0


Query: 1    MDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI 60
            MDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI
Sbjct: 1188 MDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI 1247

Query: 61   ISDRDARFTSKFWKGLQLGLGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW 120
            ISDRDARFTSKFWKGLQL LGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW
Sbjct: 1248 ISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW 1307

Query: 121  DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQ 180
            DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQ
Sbjct: 1308 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQ 1367

Query: 181  KIRARMLTTQSRQKSYADIRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFE 240
            KIRARMLT QSRQKSYAD+RRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFE
Sbjct: 1368 KIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFE 1427

Query: 241  ILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPL 287
            ILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPL
Sbjct: 1428 ILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPL 1473

[Close]

BLAST of Cmc02g0050691 vs. ExPASy TrEMBL
Match: A0A5A7TSL0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold191G001340 PE=4 SV=1)

HSP 1 Score: 583.6 bits (1503), Expect = 4.6e-163
Identity = 283/286 (98.95%), Postives = 284/286 (99.30%), Query Frame = 0


Query: 1    MDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI 60
            MDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI
Sbjct: 1188 MDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI 1247

Query: 61   ISDRDARFTSKFWKGLQLGLGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW 120
            ISDRDARFTSKFWKGLQL LGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW
Sbjct: 1248 ISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW 1307

Query: 121  DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQ 180
            DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQ
Sbjct: 1308 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQ 1367

Query: 181  KIRARMLTTQSRQKSYADIRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFE 240
            KIRARMLT QSRQKSYAD+RRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFE
Sbjct: 1368 KIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFE 1427

Query: 241  ILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPL 287
            ILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPL
Sbjct: 1428 ILERIGPVAYRLALPPSFAAVHDVFHISMLRKYVADPTHVVDFEPL 1473

The following BLAST results are available for this feature:

BLAST of Cmc02g0050691 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0036007.1	3.9e-164	100.00	pol protein [Cucumis melo var. makuwa]	[more]
KAA0031437.1	9.5e-163	98.95	pol protein [Cucumis melo var. makuwa]	[more]
KAA0033825.1	9.5e-163	98.95	pol protein [Cucumis melo var. makuwa]	[more]
KAA0025848.1	9.5e-163	98.95	pol protein [Cucumis melo var. makuwa] >KAA0035212.1 pol protein [Cucumis melo v...	[more]
TYK28422.1	9.5e-163	98.95	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc02g0050691 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	2.0e-38	35.51	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	2.0e-38	35.51	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	2.0e-38	35.51	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	2.0e-38	35.51	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	2.0e-38	35.51	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc02g0050691 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T356	1.9e-164	100.00	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4864G00010 P...	[more]
A0A5D3CQB5	4.6e-163	98.95	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A5A7UBS1	4.6e-163	98.95	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13...	[more]
A0A5A7TEQ2	4.6e-163	98.95	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold19...	[more]
A0A5A7TSL0	4.6e-163	98.95	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19...	[more]

BLAST of Cmc02g0050691 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 1..192 e-value: 1.5E-42 score: 147.2
None	No IPR available	PANTHER	PTHR46148:SF18	IPP TRANSFERASE	coord: 105..283
None	No IPR available	PANTHER	PTHR46148	FAMILY NOT NAMED	coord: 105..283
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 1..151 score: 18.068501
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 1..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc02g0050691.1	Cmc02g0050691.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:1901800	positive regulation of proteasomal protein catabolic process
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
cellular_component	GO:0000502	proteasome complex
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0036402	proteasome-activating activity
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008194	UDP-glycosyltransferase activity
molecular_function	GO:0008270	zinc ion binding