Cmc02g0049981 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc02g0049981
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Unknown protein
Location	CMiso1.1chr02: 15890494 .. 15890877 (-)
RNA-Seq Expression	Cmc02g0049981
Synteny	Cmc02g0049981

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCACCAATCTCCTCACTTTCACCCCCGCCGGCATCCGTGCCTGTGCCGCCTCCGCCGACCGCCGCTCCGACCTTAACCGTCGCAAAGCCTCATCCTCTACCAACTGGTGGGCCCCGGTCTTCGGCTGGTCCTCCGAACCCGACTATATTGACTCCGCCGCCAACAAGGCTGAACCTCAGAACCTTGCCGGCGCTGCTTCCAAACCAGATCTGGAGACGAAGTCCGTTAGGGGTCGATTTTCCCCTGGCTGCTTCACGGAAGCGAAGGCTCGACAGCTGCGAATGATGACGACGGAAACAGAGTCGTTTCACGACGTTATGTACCACTCGGCGATCGCATCTCGTCTGGCTTCCGACTTCAAAAGTCGTGGCGATTCTTGA

mRNA sequence

ATGGCCACCAATCTCCTCACTTTCACCCCCGCCGGCATCCGTGCCTGTGCCGCCTCCGCCGACCGCCGCTCCGACCTTAACCGTCGCAAAGCCTCATCCTCTACCAACTGGTGGGCCCCGGTCTTCGGCTGGTCCTCCGAACCCGACTATATTGACTCCGCCGCCAACAAGGCTGAACCTCAGAACCTTGCCGGCGCTGCTTCCAAACCAGATCTGGAGACGAAGTCCGTTAGGGGTCGATTTTCCCCTGGCTGCTTCACGGAAGCGAAGGCTCGACAGCTGCGAATGATGACGACGGAAACAGAGTCGTTTCACGACGTTATGTACCACTCGGCGATCGCATCTCGTCTGGCTTCCGACTTCAAAAGTCGTGGCGATTCTTGA

Coding sequence (CDS)

ATGGCCACCAATCTCCTCACTTTCACCCCCGCCGGCATCCGTGCCTGTGCCGCCTCCGCCGACCGCCGCTCCGACCTTAACCGTCGCAAAGCCTCATCCTCTACCAACTGGTGGGCCCCGGTCTTCGGCTGGTCCTCCGAACCCGACTATATTGACTCCGCCGCCAACAAGGCTGAACCTCAGAACCTTGCCGGCGCTGCTTCCAAACCAGATCTGGAGACGAAGTCCGTTAGGGGTCGATTTTCCCCTGGCTGCTTCACGGAAGCGAAGGCTCGACAGCTGCGAATGATGACGACGGAAACAGAGTCGTTTCACGACGTTATGTACCACTCGGCGATCGCATCTCGTCTGGCTTCCGACTTCAAAAGTCGTGGCGATTCTTGA

Protein sequence

MATNLLTFTPAGIRACAASADRRSDLNRRKASSSTNWWAPVFGWSSEPDYIDSAANKAEPQNLAGAASKPDLETKSVRGRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLASDFKSRGDS

Homology

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BLAST of Cmc02g0049981 vs. NCBI nr
Match: XP_016903293.1 (PREDICTED: uncharacterized protein LOC103502747 [Cucumis melo] >KAA0046733.1 uncharacterized protein E6C27_scaffold216G00140 [Cucumis melo var. makuwa] >TYK14510.1 uncharacterized protein E5676_scaffold15G00250 [Cucumis melo var. makuwa])

HSP 1 Score: 254.6 bits (649), Expect = 4.5e-64
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 1   MATNLLTFTPAGIRACAASADRRSDLNRRKASSSTNWWAPVFGWSSEPDYIDSAANKAEP 60
           MATNLLTFTPAGIRACAASADRRSDLNRRKASSSTNWWAPVFGWSSEPDYIDSAANKAEP
Sbjct: 1   MATNLLTFTPAGIRACAASADRRSDLNRRKASSSTNWWAPVFGWSSEPDYIDSAANKAEP 60

Query: 61  QNLAGAASKPDLETKSVRGRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLASD 120
           QNLAGAASKPDLETKSVRGRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLASD
Sbjct: 61  QNLAGAASKPDLETKSVRGRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLASD 120

Query: 121 FKSRGDS 128
           FKSRGDS
Sbjct: 121 FKSRGDS 127

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BLAST of Cmc02g0049981 vs. NCBI nr
Match: XP_011656185.1 (uncharacterized protein LOC105435656 [Cucumis sativus] >KGN65295.1 hypothetical protein Csa_019984 [Cucumis sativus])

HSP 1 Score: 228.8 bits (582), Expect = 2.6e-56
Identity = 115/127 (90.55%), Postives = 120/127 (94.49%), Query Frame = 0


Query: 1   MATNLLTFTPAGIRACAASADRRSDLNRRKASSSTNWWAPVFGWSSEPDYIDSAANKAEP 60
           MATNLLTF PAGIRACA+SADRRSD +RRK SSS+NWWAPVFGWSSEPDYIDS  NKAEP
Sbjct: 1   MATNLLTFPPAGIRACASSADRRSDHSRRKTSSSSNWWAPVFGWSSEPDYIDS-GNKAEP 60

Query: 61  QNLAGAASKPDLETKSVRGRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLASD 120
           QNLAG +SKPDLETKS+RGRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLASD
Sbjct: 61  QNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLASD 120

Query: 121 FKSRGDS 128
           FKSR DS
Sbjct: 121 FKSREDS 126

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BLAST of Cmc02g0049981 vs. NCBI nr
Match: XP_038880363.1 (uncharacterized protein LOC120072011 [Benincasa hispida])

HSP 1 Score: 223.8 bits (569), Expect = 8.5e-55
Identity = 114/127 (89.76%), Postives = 117/127 (92.13%), Query Frame = 0


Query: 1   MATNLLTFTPAGIRACAASADRRSDLNRRKASSSTNWWAPVFGWSSEPDYIDSAANKAEP 60
           MATNLLTF PAGIRACAASADRRSD NRRK SSS+NWWAPVFGWSSEPDYIDS ANKAEP
Sbjct: 1   MATNLLTFPPAGIRACAASADRRSDHNRRKTSSSSNWWAPVFGWSSEPDYIDS-ANKAEP 60

Query: 61  QNLAGAASKPDLETKSVRGRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLASD 120
           Q+LAG  SK D ETKSVR RFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLASD
Sbjct: 61  QDLAGGVSKSDPETKSVRARFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLASD 120

Query: 121 FKSRGDS 128
           FK+R DS
Sbjct: 121 FKTRADS 126

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BLAST of Cmc02g0049981 vs. NCBI nr
Match: XP_022960569.1 (uncharacterized protein LOC111461308 [Cucurbita moschata])

HSP 1 Score: 189.5 bits (480), Expect = 1.8e-44
Identity = 100/131 (76.34%), Postives = 107/131 (81.68%), Query Frame = 0


Query: 1   MATNLLTFTPAGIRACAASADRRSDLNRRKA----SSSTNWWAPVFGWSSEPDYIDSAAN 60
           MATNL TF P  IRACA+SAD     NRRKA    SSS+NWWAPVFGWSSEPDYIDS  N
Sbjct: 1   MATNLFTFAPTSIRACASSADH----NRRKASSSSSSSSNWWAPVFGWSSEPDYIDS-GN 60

Query: 61  KAEPQNLAGAASKPDLETKSVRGRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASR 120
           K+ P+NLA   SK D ETKS R RFSPGCFTE+KARQLR+MT ETESFHDVMYHSAIASR
Sbjct: 61  KSNPKNLADGVSKSDPETKSSRNRFSPGCFTESKARQLRLMTMETESFHDVMYHSAIASR 120

Query: 121 LASDFKSRGDS 128
           LA+DFKSRGDS
Sbjct: 121 LATDFKSRGDS 126

[Close]

BLAST of Cmc02g0049981 vs. NCBI nr
Match: XP_023516733.1 (uncharacterized protein LOC111780539 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 186.8 bits (473), Expect = 1.2e-43
Identity = 97/127 (76.38%), Postives = 104/127 (81.89%), Query Frame = 0


Query: 1   MATNLLTFTPAGIRACAASADRRSDLNRRKASSSTNWWAPVFGWSSEPDYIDSAANKAEP 60
           MATNL TF P  IRA A+SAD     NRRK  SS+NWWAPVFGWSSEPDYIDS  NK+ P
Sbjct: 1   MATNLFTFAPTSIRARASSADN----NRRKTFSSSNWWAPVFGWSSEPDYIDS-GNKSNP 60

Query: 61  QNLAGAASKPDLETKSVRGRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLASD 120
           +NLA   SK D ETKS R RFSPGCFTE+KARQLR+MT ETESFHDVMYHSAIASRLA+D
Sbjct: 61  KNLADGVSKSDPETKSSRNRFSPGCFTESKARQLRLMTMETESFHDVMYHSAIASRLATD 120

Query: 121 FKSRGDS 128
           FKSRGDS
Sbjct: 121 FKSRGDS 122

[Close]

BLAST of Cmc02g0049981 vs. ExPASy TrEMBL
Match: A0A5D3CSV6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold15G00250 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.2e-64
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 1   MATNLLTFTPAGIRACAASADRRSDLNRRKASSSTNWWAPVFGWSSEPDYIDSAANKAEP 60
           MATNLLTFTPAGIRACAASADRRSDLNRRKASSSTNWWAPVFGWSSEPDYIDSAANKAEP
Sbjct: 1   MATNLLTFTPAGIRACAASADRRSDLNRRKASSSTNWWAPVFGWSSEPDYIDSAANKAEP 60

Query: 61  QNLAGAASKPDLETKSVRGRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLASD 120
           QNLAGAASKPDLETKSVRGRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLASD
Sbjct: 61  QNLAGAASKPDLETKSVRGRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLASD 120

Query: 121 FKSRGDS 128
           FKSRGDS
Sbjct: 121 FKSRGDS 127

[Close]

BLAST of Cmc02g0049981 vs. ExPASy TrEMBL
Match: A0A1S4E4Y4 (uncharacterized protein LOC103502747 OS=Cucumis melo OX=3656 GN=LOC103502747 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.2e-64
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 1   MATNLLTFTPAGIRACAASADRRSDLNRRKASSSTNWWAPVFGWSSEPDYIDSAANKAEP 60
           MATNLLTFTPAGIRACAASADRRSDLNRRKASSSTNWWAPVFGWSSEPDYIDSAANKAEP
Sbjct: 1   MATNLLTFTPAGIRACAASADRRSDLNRRKASSSTNWWAPVFGWSSEPDYIDSAANKAEP 60

Query: 61  QNLAGAASKPDLETKSVRGRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLASD 120
           QNLAGAASKPDLETKSVRGRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLASD
Sbjct: 61  QNLAGAASKPDLETKSVRGRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLASD 120

Query: 121 FKSRGDS 128
           FKSRGDS
Sbjct: 121 FKSRGDS 127

[Close]

BLAST of Cmc02g0049981 vs. ExPASy TrEMBL
Match: A0A0A0LTN7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G303705 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.3e-56
Identity = 115/127 (90.55%), Postives = 120/127 (94.49%), Query Frame = 0


Query: 1   MATNLLTFTPAGIRACAASADRRSDLNRRKASSSTNWWAPVFGWSSEPDYIDSAANKAEP 60
           MATNLLTF PAGIRACA+SADRRSD +RRK SSS+NWWAPVFGWSSEPDYIDS  NKAEP
Sbjct: 1   MATNLLTFPPAGIRACASSADRRSDHSRRKTSSSSNWWAPVFGWSSEPDYIDS-GNKAEP 60

Query: 61  QNLAGAASKPDLETKSVRGRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLASD 120
           QNLAG +SKPDLETKS+RGRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLASD
Sbjct: 61  QNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLASD 120

Query: 121 FKSRGDS 128
           FKSR DS
Sbjct: 121 FKSREDS 126

[Close]

BLAST of Cmc02g0049981 vs. ExPASy TrEMBL
Match: A0A6J1HBD8 (uncharacterized protein LOC111461308 OS=Cucurbita moschata OX=3662 GN=LOC111461308 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 8.6e-45
Identity = 100/131 (76.34%), Postives = 107/131 (81.68%), Query Frame = 0


Query: 1   MATNLLTFTPAGIRACAASADRRSDLNRRKA----SSSTNWWAPVFGWSSEPDYIDSAAN 60
           MATNL TF P  IRACA+SAD     NRRKA    SSS+NWWAPVFGWSSEPDYIDS  N
Sbjct: 1   MATNLFTFAPTSIRACASSADH----NRRKASSSSSSSSNWWAPVFGWSSEPDYIDS-GN 60

Query: 61  KAEPQNLAGAASKPDLETKSVRGRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASR 120
           K+ P+NLA   SK D ETKS R RFSPGCFTE+KARQLR+MT ETESFHDVMYHSAIASR
Sbjct: 61  KSNPKNLADGVSKSDPETKSSRNRFSPGCFTESKARQLRLMTMETESFHDVMYHSAIASR 120

Query: 121 LASDFKSRGDS 128
           LA+DFKSRGDS
Sbjct: 121 LATDFKSRGDS 126

[Close]

BLAST of Cmc02g0049981 vs. ExPASy TrEMBL
Match: A0A6J1JBM9 (uncharacterized protein LOC111485309 OS=Cucurbita maxima OX=3661 GN=LOC111485309 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 5.6e-44
Identity = 98/128 (76.56%), Postives = 106/128 (82.81%), Query Frame = 0


Query: 1   MATNLLTFTPAGIRACAASADRRSDLNRRK-ASSSTNWWAPVFGWSSEPDYIDSAANKAE 60
           MATNL TF P  IRACA+SAD     NRRK +SSS+NWWAPVFGWSSEPDYIDS ANK+ 
Sbjct: 1   MATNLFTFAPTSIRACASSADH----NRRKTSSSSSNWWAPVFGWSSEPDYIDS-ANKSN 60

Query: 61  PQNLAGAASKPDLETKSVRGRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLAS 120
           P+  A   SK D ETKS R RFSPGCFTE+KARQLR+MT ETESFHDVMYHSAIASRLA+
Sbjct: 61  PKTPADGVSKSDPETKSARNRFSPGCFTESKARQLRLMTMETESFHDVMYHSAIASRLAT 120

Query: 121 DFKSRGDS 128
           DFKSRGDS
Sbjct: 121 DFKSRGDS 123

[Close]

BLAST of Cmc02g0049981 vs. TAIR 10
Match: AT1G52720.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15630.1); Has 61 Blast hits to 61 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 93.6 bits (231), Expect = 1.2e-19
Identity = 54/116 (46.55%), Postives = 70/116 (60.34%), Query Frame = 0


Query: 13  IRACAASADRRSDLNRRKASSSTNWWAPVFGWSSEPDY--IDSAANKAEPQ--NLAGAAS 72
           IRA + S     D NR+K+++   WWAP+FG  S+PDY  I+S+ +   P   +++G+  
Sbjct: 13  IRASSGSGSLNPDQNRKKSAA---WWAPLFGLPSDPDYLNIESSCSTVNPDKTDISGSGQ 72

Query: 73  KPDLETKSVRGRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLASDFKSR 125
           K           F  GCFTE KA+QLR  T E  +FHDVMYHSAIASRLASD   R
Sbjct: 73  K-----------FRRGCFTEEKAKQLRRKTAEASTFHDVMYHSAIASRLASDITGR 114

[Close]

BLAST of Cmc02g0049981 vs. TAIR 10
Match: AT3G15630.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52720.1); Has 61 Blast hits to 61 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 90.9 bits (224), Expect = 8.0e-19
Identity = 55/116 (47.41%), Postives = 68/116 (58.62%), Query Frame = 0


Query: 11  AGIRACAA----SADRRSDLNRRKASSSTNWWAPVFGWSSEPDYIDSAANKAEPQNLAGA 70
           A I +C+A     A   SD  R+K  SS +WWAP+FG SSEPDY++   N     + A  
Sbjct: 2   ATIISCSALSSIRASSESDPARKKPVSSVSWWAPLFGMSSEPDYVNKTVNLESDLDKA-- 61

Query: 71  ASKPDLETKSVRGRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLASDFK 123
                 E +S+R      C TE KA+QLR  T E  +FHDVMYHSAIASRLASD +
Sbjct: 62  ------EKRSLR-----CCLTEEKAKQLRRKTAEASTFHDVMYHSAIASRLASDVR 104

The following BLAST results are available for this feature:

BLAST of Cmc02g0049981 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016903293.1	4.5e-64	100.00	PREDICTED: uncharacterized protein LOC103502747 [Cucumis melo] >KAA0046733.1 unc...	[more]
XP_011656185.1	2.6e-56	90.55	uncharacterized protein LOC105435656 [Cucumis sativus] >KGN65295.1 hypothetical ...	[more]
XP_038880363.1	8.5e-55	89.76	uncharacterized protein LOC120072011 [Benincasa hispida]	[more]
XP_022960569.1	1.8e-44	76.34	uncharacterized protein LOC111461308 [Cucurbita moschata]	[more]
XP_023516733.1	1.2e-43	76.38	uncharacterized protein LOC111780539 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cmc02g0049981 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc02g0049981 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CSV6	2.2e-64	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S4E4Y4	2.2e-64	100.00	uncharacterized protein LOC103502747 OS=Cucumis melo OX=3656 GN=LOC103502747 PE=...	[more]
A0A0A0LTN7	1.3e-56	90.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G303705 PE=4 SV=1	[more]
A0A6J1HBD8	8.6e-45	76.34	uncharacterized protein LOC111461308 OS=Cucurbita moschata OX=3662 GN=LOC1114613...	[more]
A0A6J1JBM9	5.6e-44	76.56	uncharacterized protein LOC111485309 OS=Cucurbita maxima OX=3661 GN=LOC111485309...	[more]

BLAST of Cmc02g0049981 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G52720.1	1.2e-19	46.55	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G15630.1	8.0e-19	47.41	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34198:SF18	PROTEIN, PUTATIVE-RELATED	coord: 1..126
None	No IPR available	PANTHER	PTHR34198	OS01G0175100 PROTEIN	coord: 1..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc02g0049981.1	Cmc02g0049981.1	mRNA