Cmc02g0049691 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc02g0049691
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr02: 15388024 .. 15388974 (-)
RNA-Seq Expression	Cmc02g0049691
Synteny	Cmc02g0049691

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCCAATCGAGCTTAAAGAATTGAAGGTGCAGTTACAAGAACTGGTTGACAAGGGATACATCAGGCCTAGTGTATCGCCTTGGGGAGCACCAGTGCTATTTGTGAAAAAGAAAGATGGTACTCTCAGATTATGTATTGACTATAAACAGTTAAACAAGGTTACAATACGTAACAAGTATCCTTTACCACACATCGATGACTTATTTGATCAGCTAAAGGGAGCAACGTTGTTCTCTAAGATTAACTTAAGATCAAGATACCACCAGTTGAAGGTTAGAGAATCGGATATTCCTAAGACAGCATTCAGAACGAGGTATGGGCACTATGAGTTCCGAGTTATGCCATTCGGTTTAACGAATGCGCGAGCGGTTTTCATGGATCTCATGAACAGGATCTTCCATCAGTATTTAGATCAGTTTGTGATCGTGTTCATTGATGATATACTAGTTTACTCGGTTGACAGAAAAGCCCATGAGGAACATCTTAGGATTATTCTACACACTCTATGTGATAAACAGATGTACGCTAAGTTCAGAAAATGTGAGTTCTTGTTGGAACAAGTAGTATTCTTGGGACATGTAGTTTCAGCAAAAGGAGTTAGTGTCGATCCACAAAAAGTAGAAGCGATTGTAAATTGGGAAAGACTAACCAGTGCGACAGAAGTACGTAGTTTCTTGGGTTTGGCAAGATACTATAGGTGTTTTATTAAGGATTTCTCACGATTGGCATTGCCTTTGACAGCTTTAACAAGGAAGAATGCTAAGTTTGAGTGGTCAGATAGATGCGAACAAAGTTTTAAGGAATTGAAAAAGAGATTAGTCACAGCACCTATTCTGGCACTCCCTGTAACAGGGAAGGACTATGTGATTTATTGTGACGCTTCGAGGCAAGGATTAGGTTGTGTTCTTATGCAATATGGGAATGTAATAGCTTATGCTTCAAGATAG

mRNA sequence

ATGGCTCCAATCGAGCTTAAAGAATTGAAGGTGCAGTTACAAGAACTGGTTGACAAGGGATACATCAGGCCTAGTGTATCGCCTTGGGGAGCACCAGTGCTATTTGTGAAAAAGAAAGATGGTACTCTCAGATTATGTATTGACTATAAACAGTTAAACAAGGTTACAATACGTAACAAGTATCCTTTACCACACATCGATGACTTATTTGATCAGCTAAAGGGAGCAACGTTGTTCTCTAAGATTAACTTAAGATCAAGATACCACCAGTTGAAGGTTAGAGAATCGGATATTCCTAAGACAGCATTCAGAACGAGGTATGGGCACTATGAGTTCCGAGTTATGCCATTCGGTTTAACGAATGCGCGAGCGGTTTTCATGGATCTCATGAACAGGATCTTCCATCAGTATTTAGATCAGTTTGTGATCGTGTTCATTGATGATATACTAGTTTACTCGGTTGACAGAAAAGCCCATGAGGAACATCTTAGGATTATTCTACACACTCTATGTGATAAACAGATGTACGCTAAGTTCAGAAAATGTGAGTTCTTGTTGGAACAAGTAGTATTCTTGGGACATGTAGTTTCAGCAAAAGGAGTTAGTGTCGATCCACAAAAAGTAGAAGCGATTGTAAATTGGGAAAGACTAACCAGTGCGACAGAAGTACGTAGTTTCTTGGGTTTGGCAAGATACTATAGGTGTTTTATTAAGGATTTCTCACGATTGGCATTGCCTTTGACAGCTTTAACAAGGAAGAATGCTAAGTTTGAGTGGTCAGATAGATGCGAACAAAGTTTTAAGGAATTGAAAAAGAGATTAGTCACAGCACCTATTCTGGCACTCCCTGTAACAGGGAAGGACTATGTGATTTATTGTGACGCTTCGAGGCAAGGATTAGGTTGTGTTCTTATGCAATATGGGAATGTAATAGCTTATGCTTCAAGATAG

Coding sequence (CDS)

ATGGCTCCAATCGAGCTTAAAGAATTGAAGGTGCAGTTACAAGAACTGGTTGACAAGGGATACATCAGGCCTAGTGTATCGCCTTGGGGAGCACCAGTGCTATTTGTGAAAAAGAAAGATGGTACTCTCAGATTATGTATTGACTATAAACAGTTAAACAAGGTTACAATACGTAACAAGTATCCTTTACCACACATCGATGACTTATTTGATCAGCTAAAGGGAGCAACGTTGTTCTCTAAGATTAACTTAAGATCAAGATACCACCAGTTGAAGGTTAGAGAATCGGATATTCCTAAGACAGCATTCAGAACGAGGTATGGGCACTATGAGTTCCGAGTTATGCCATTCGGTTTAACGAATGCGCGAGCGGTTTTCATGGATCTCATGAACAGGATCTTCCATCAGTATTTAGATCAGTTTGTGATCGTGTTCATTGATGATATACTAGTTTACTCGGTTGACAGAAAAGCCCATGAGGAACATCTTAGGATTATTCTACACACTCTATGTGATAAACAGATGTACGCTAAGTTCAGAAAATGTGAGTTCTTGTTGGAACAAGTAGTATTCTTGGGACATGTAGTTTCAGCAAAAGGAGTTAGTGTCGATCCACAAAAAGTAGAAGCGATTGTAAATTGGGAAAGACTAACCAGTGCGACAGAAGTACGTAGTTTCTTGGGTTTGGCAAGATACTATAGGTGTTTTATTAAGGATTTCTCACGATTGGCATTGCCTTTGACAGCTTTAACAAGGAAGAATGCTAAGTTTGAGTGGTCAGATAGATGCGAACAAAGTTTTAAGGAATTGAAAAAGAGATTAGTCACAGCACCTATTCTGGCACTCCCTGTAACAGGGAAGGACTATGTGATTTATTGTGACGCTTCGAGGCAAGGATTAGGTTGTGTTCTTATGCAATATGGGAATGTAATAGCTTATGCTTCAAGATAG

Protein sequence

MAPIELKELKVQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYKQLNKVTIRNKYPLPHIDDLFDQLKGATLFSKINLRSRYHQLKVRESDIPKTAFRTRYGHYEFRVMPFGLTNARAVFMDLMNRIFHQYLDQFVIVFIDDILVYSVDRKAHEEHLRIILHTLCDKQMYAKFRKCEFLLEQVVFLGHVVSAKGVSVDPQKVEAIVNWERLTSATEVRSFLGLARYYRCFIKDFSRLALPLTALTRKNAKFEWSDRCEQSFKELKKRLVTAPILALPVTGKDYVIYCDASRQGLGCVLMQYGNVIAYASR

Homology

[Close]

BLAST of Cmc02g0049691 vs. NCBI nr
Match: KAA0050527.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 577.4 bits (1487), Expect = 7.5e-161
Identity = 286/316 (90.51%), Postives = 300/316 (94.94%), Query Frame = 0


Query: 1   MAPIELKELKVQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYKQLNKVTIRNK 60
           MAP ELKELK+QLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDY+QLNKVTIRNK
Sbjct: 326 MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 385

Query: 61  YPLPHIDDLFDQLKGATLFSKINLRSRYHQLKVRESDIPKTAFRTRYGHYEFRVMPFGLT 120
           YPLP IDDLFDQL+GATLFSKI+LRS YHQLKVRESDI KTAFRTRYGHYEFRVMPFGLT
Sbjct: 386 YPLPRIDDLFDQLRGATLFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 445

Query: 121 NARAVFMDLMNRIFHQYLDQFVIVFIDDILVYSVDRKAHEEHLRIILHTLCDKQMYAKFR 180
           NA AVFMDLMNRIFH+YLDQFVIVFIDDILVYSVDR++HEEHLRI+L TL +KQ+YAKF 
Sbjct: 446 NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 505

Query: 181 KCEFLLEQVVFLGHVVSAKGVSVDPQKVEAIVNWERLTSATEVRSFLGLARYYRCFIKDF 240
           KCEF LEQVVFLGHVVSAKGVSVDPQKVEA+VNWER  SATEVRSFLGLA YYR FI+DF
Sbjct: 506 KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDF 565

Query: 241 SRLALPLTALTRKNAKFEWSDRCEQSFKELKKRLVTAPILALPVTGKDYVIYCDASRQGL 300
           SRLALPLTALTRKN KFEWSD+CEQSF+ELKKRLVTAPILALPVTGKDYVIYCDASR GL
Sbjct: 566 SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 625

Query: 301 GCVLMQYGNVIAYASR 317
           GCVLMQ GNVIAYASR
Sbjct: 626 GCVLMQDGNVIAYASR 641

[Close]

BLAST of Cmc02g0049691 vs. NCBI nr
Match: KAA0066849.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 577.4 bits (1487), Expect = 7.5e-161
Identity = 286/316 (90.51%), Postives = 300/316 (94.94%), Query Frame = 0


Query: 1   MAPIELKELKVQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYKQLNKVTIRNK 60
           MAP ELKELK+QLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDY+QLNKVTIRNK
Sbjct: 665 MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 724

Query: 61  YPLPHIDDLFDQLKGATLFSKINLRSRYHQLKVRESDIPKTAFRTRYGHYEFRVMPFGLT 120
           YPLP IDDLFDQL+GATLFSKI+LRS YHQLKVRESDI KTAFRTRYGHYEFRVMPFGLT
Sbjct: 725 YPLPRIDDLFDQLRGATLFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 784

Query: 121 NARAVFMDLMNRIFHQYLDQFVIVFIDDILVYSVDRKAHEEHLRIILHTLCDKQMYAKFR 180
           NA AVFMDLMNRIFH+YLDQFVIVFIDDILVYSVDR++HEEHLRI+L TL +KQ+YAKF 
Sbjct: 785 NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 844

Query: 181 KCEFLLEQVVFLGHVVSAKGVSVDPQKVEAIVNWERLTSATEVRSFLGLARYYRCFIKDF 240
           KCEF LEQVVFLGHVVSAKGVSVDPQKVEA+VNWER  SATEVRSFLGLA YYR FI+DF
Sbjct: 845 KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDF 904

Query: 241 SRLALPLTALTRKNAKFEWSDRCEQSFKELKKRLVTAPILALPVTGKDYVIYCDASRQGL 300
           SRLALPLTALTRKN KFEWSD+CEQSF+ELKKRLVTAPILALPVTGKDYVIYCDASR GL
Sbjct: 905 SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 964

Query: 301 GCVLMQYGNVIAYASR 317
           GCVLMQ GNVIAYASR
Sbjct: 965 GCVLMQDGNVIAYASR 980

[Close]

BLAST of Cmc02g0049691 vs. NCBI nr
Match: KAA0062270.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 577.4 bits (1487), Expect = 7.5e-161
Identity = 286/316 (90.51%), Postives = 300/316 (94.94%), Query Frame = 0


Query: 1   MAPIELKELKVQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYKQLNKVTIRNK 60
           MAP ELKELK+QLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDY+QLNKVTIRNK
Sbjct: 563 MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 622

Query: 61  YPLPHIDDLFDQLKGATLFSKINLRSRYHQLKVRESDIPKTAFRTRYGHYEFRVMPFGLT 120
           YPLP IDDLFDQL+GATLFSKI+LRS YHQLKVRESDI KTAFRTRYGHYEFRVMPFGLT
Sbjct: 623 YPLPRIDDLFDQLRGATLFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 682

Query: 121 NARAVFMDLMNRIFHQYLDQFVIVFIDDILVYSVDRKAHEEHLRIILHTLCDKQMYAKFR 180
           NA AVFMDLMNRIFH+YLDQFVIVFIDDILVYSVDR++HEEHLRI+L TL +KQ+YAKF 
Sbjct: 683 NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 742

Query: 181 KCEFLLEQVVFLGHVVSAKGVSVDPQKVEAIVNWERLTSATEVRSFLGLARYYRCFIKDF 240
           KCEF LEQVVFLGHVVSAKGVSVDPQKVEA+VNWER  SATEVRSFLGLA YYR FI+DF
Sbjct: 743 KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDF 802

Query: 241 SRLALPLTALTRKNAKFEWSDRCEQSFKELKKRLVTAPILALPVTGKDYVIYCDASRQGL 300
           SRLALPLTALTRKN KFEWSD+CEQSF+ELKKRLVTAPILALPVTGKDYVIYCDASR GL
Sbjct: 803 SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 862

Query: 301 GCVLMQYGNVIAYASR 317
           GCVLMQ GNVIAYASR
Sbjct: 863 GCVLMQDGNVIAYASR 878

[Close]

BLAST of Cmc02g0049691 vs. NCBI nr
Match: KAA0036676.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 577.4 bits (1487), Expect = 7.5e-161
Identity = 286/316 (90.51%), Postives = 300/316 (94.94%), Query Frame = 0


Query: 1   MAPIELKELKVQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYKQLNKVTIRNK 60
           MAP ELKELK+QLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDY+QLNKVTIRNK
Sbjct: 266 MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 325

Query: 61  YPLPHIDDLFDQLKGATLFSKINLRSRYHQLKVRESDIPKTAFRTRYGHYEFRVMPFGLT 120
           YPLP IDDLFDQL+GATLFSKI+LRS YHQLKVRESDI KTAFRTRYGHYEFRVMPFGLT
Sbjct: 326 YPLPRIDDLFDQLRGATLFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 385

Query: 121 NARAVFMDLMNRIFHQYLDQFVIVFIDDILVYSVDRKAHEEHLRIILHTLCDKQMYAKFR 180
           NA AVFMDLMNRIFH+YLDQFVIVFIDDILVYSVDR++HEEHLRI+L TL +KQ+YAKF 
Sbjct: 386 NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 445

Query: 181 KCEFLLEQVVFLGHVVSAKGVSVDPQKVEAIVNWERLTSATEVRSFLGLARYYRCFIKDF 240
           KCEF LEQVVFLGHVVSAKGVSVDPQKVEA+VNWER  SATEVRSFLGLA YYR FI+DF
Sbjct: 446 KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDF 505

Query: 241 SRLALPLTALTRKNAKFEWSDRCEQSFKELKKRLVTAPILALPVTGKDYVIYCDASRQGL 300
           SRLALPLTALTRKN KFEWSD+CEQSF+ELKKRLVTAPILALPVTGKDYVIYCDASR GL
Sbjct: 506 SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 565

Query: 301 GCVLMQYGNVIAYASR 317
           GCVLMQ GNVIAYASR
Sbjct: 566 GCVLMQDGNVIAYASR 581

[Close]

BLAST of Cmc02g0049691 vs. NCBI nr
Match: TYK06334.1 (putative polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 575.9 bits (1483), Expect = 2.2e-160
Identity = 285/316 (90.19%), Postives = 299/316 (94.62%), Query Frame = 0


Query: 1   MAPIELKELKVQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYKQLNKVTIRNK 60
           MAP ELKELK+QLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDY+QLNKVTIRNK
Sbjct: 627 MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 686

Query: 61  YPLPHIDDLFDQLKGATLFSKINLRSRYHQLKVRESDIPKTAFRTRYGHYEFRVMPFGLT 120
           YPLP IDDLFDQL+GA LFSKI+LRS YHQLKVRESDI KTAFRTRYGHYEFRVMPFGLT
Sbjct: 687 YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 746

Query: 121 NARAVFMDLMNRIFHQYLDQFVIVFIDDILVYSVDRKAHEEHLRIILHTLCDKQMYAKFR 180
           NA AVFMDLMNRIFH+YLDQFVIVFIDDILVYSVDR++HEEHLRI+L TL +KQ+YAKF 
Sbjct: 747 NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 806

Query: 181 KCEFLLEQVVFLGHVVSAKGVSVDPQKVEAIVNWERLTSATEVRSFLGLARYYRCFIKDF 240
           KCEF LEQVVFLGHVVSAKGVSVDPQKVEA+VNWER  SATEVRSFLGLA YYR FI+DF
Sbjct: 807 KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDF 866

Query: 241 SRLALPLTALTRKNAKFEWSDRCEQSFKELKKRLVTAPILALPVTGKDYVIYCDASRQGL 300
           SRLALPLTALTRKN KFEWSD+CEQSF+ELKKRLVTAPILALPVTGKDYVIYCDASR GL
Sbjct: 867 SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 926

Query: 301 GCVLMQYGNVIAYASR 317
           GCVLMQ GNVIAYASR
Sbjct: 927 GCVLMQNGNVIAYASR 942

[Close]

BLAST of Cmc02g0049691 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 7.0e-61
Identity = 121/316 (38.29%), Postives = 197/316 (62.34%), Query Frame = 0


Query: 8   ELKVQLQELVDKGYIRPSVSPWGAPVLFVKKKD-----GTLRLCIDYKQLNKVTIRNKYP 67
           E++ Q+QE++++G IR S SP+ +P   V KK         R+ IDY++LN++TI ++YP
Sbjct: 221 EVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVVIDYRKLNEITIPDRYP 280

Query: 68  LPHIDDLFDQLKGATLFSKINLRSRYHQLKVRESDIPKTAFRTRYGHYEFRVMPFGLTNA 127
           +P++D++  +L     F+ I+L   +HQ+++ E  I KTAF T+ GHYE+  MPFGL NA
Sbjct: 281 IPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKSGHYEYLRMPFGLRNA 340

Query: 128 RAVFMDLMNRIFHQYLDQFVIVFIDDILVYSVDRKAHEEHLRIILHTLCDKQMYAKFRKC 187
            A F   MN I    L++  +V++DDI+++S     H   ++++   L D  +  +  KC
Sbjct: 341 PATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKLADANLKLQLDKC 400

Query: 188 EFLLEQVVFLGHVVSAKGVSVDPQKVEAIVNWERLTSATEVRSFLGLARYYRCFIKDFSR 247
           EFL ++  FLGH+V+  G+  +P KV+AIV++   T   E+R+FLGL  YYR FI +++ 
Sbjct: 401 EFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFLGLTGYYRKFIPNYAD 460

Query: 248 LALPLTALTRKNAKFEWSDRCE--QSFKELKKRLVTAPILALPVTGKDYVIYCDASRQGL 307
           +A P+T+  +K  K + + + E  ++F++LK  ++  PIL LP   K +V+  DAS   L
Sbjct: 461 IAKPMTSCLKKRTKID-TQKLEYIEAFEKLKALIIRDPILQLPDFEKKFVLTTDASNLAL 520

Query: 308 GCVLMQYGNVIAYASR 317
           G VL Q G+ I++ SR
Sbjct: 521 GAVLSQNGHPISFISR 535

[Close]

BLAST of Cmc02g0049691 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 3.5e-60
Identity = 115/316 (36.39%), Postives = 194/316 (61.39%), Query Frame = 0


Query: 7   KELKVQLQELVDKGYIRPSVSPWGAPVLFVKKKDGT-----LRLCIDYKQLNKVTIRNKY 66
           +E++ Q+Q+++++G IR S SP+ +P+  V KK         R+ IDY++LN++T+ +++
Sbjct: 221 QEVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRH 280

Query: 67  PLPHIDDLFDQLKGATLFSKINLRSRYHQLKVRESDIPKTAFRTRYGHYEFRVMPFGLTN 126
           P+P++D++  +L     F+ I+L   +HQ+++    + KTAF T++GHYE+  MPFGL N
Sbjct: 281 PIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKN 340

Query: 127 ARAVFMDLMNRIFHQYLDQFVIVFIDDILVYSVDRKAHEEHLRIILHTLCDKQMYAKFRK 186
           A A F   MN I    L++  +V++DDI+V+S     H + L ++   L    +  +  K
Sbjct: 341 APATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLDK 400

Query: 187 CEFLLEQVVFLGHVVSAKGVSVDPQKVEAIVNWERLTSATEVRSFLGLARYYRCFIKDFS 246
           CEFL ++  FLGHV++  G+  +P+K+EAI  +   T   E+++FLGL  YYR FI +F+
Sbjct: 401 CEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPNFA 460

Query: 247 RLALPLTALTRKNAKFEWSD-RCEQSFKELKKRLVTAPILALPVTGKDYVIYCDASRQGL 306
            +A P+T   +KN K + ++   + +FK+LK  +   PIL +P   K + +  DAS   L
Sbjct: 461 DIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLTTDASDVAL 520

Query: 307 GCVLMQYGNVIAYASR 317
           G VL Q G+ ++Y SR
Sbjct: 521 GAVLSQDGHPLSYISR 536

[Close]

BLAST of Cmc02g0049691 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 1.3e-59
Identity = 133/335 (39.70%), Postives = 196/335 (58.51%), Query Frame = 0


Query: 3   PIELK-ELKVQLQELVDKGYIRPSVSPWGAPVLFVKKK-----DGTLRLCIDYKQLNKVT 62
           P+ ++ E++ Q+ EL+  G IRPS SP+ +P+  V KK     +   R+ +D+K+LN VT
Sbjct: 132 PVNMRGEVERQIDELLQDGIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVT 191

Query: 63  IRNKYPLPHIDDLFDQLKGATLFSKINLRSRYHQLKVRESDIPKTAFRTRYGHYEFRVMP 122
           I + YP+P I+     L  A  F+ ++L S +HQ+ ++ESDIPKTAF T  G YEF  +P
Sbjct: 192 IPDTYPIPDINATLASLGNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLP 251

Query: 123 FGLTNARAVFMDLMNRIFHQYLDQFVIVFIDDILVYSVDRKAHEEHLRIILHTLCDKQMY 182
           FGL NA A+F  +++ I  +++ +   V+IDDI+V+S D   H ++LR++L +L    + 
Sbjct: 252 FGLKNAPAIFQRMIDDILREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQ 311

Query: 183 AKFRKCEFLLEQVVFLGHVVSAKGVSVDPQKVEAIVNWERLTSATEVRSFLGLARYYRCF 242
               K  FL  QV FLG++V+A G+  DP+KV AI      TS  E++ FLG+  YYR F
Sbjct: 312 VNLEKSHFLDTQVEFLGYIVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYYRKF 371

Query: 243 IKDFSRLALPLTALTR---KNAKFEWSDRCE--------QSFKELKKRLVTAPILALPVT 302
           I+D++++A PLT LTR    N K   S +          QSF +LK  L ++ ILA P  
Sbjct: 372 IQDYAKVAKPLTNLTRGLYANIKSSQSSKVPITLDETALQSFNDLKSILCSSEILAFPCF 431

Query: 303 GKDYVIYCDASRQGLGCVLMQ----YGNVIAYASR 317
            K + +  DAS   +G VL Q        IAY SR
Sbjct: 432 TKPFHLTTDASNWAIGAVLSQDDQGRDRPIAYISR 466

[Close]

BLAST of Cmc02g0049691 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 212.2 bits (539), Expect = 8.3e-54
Identity = 116/317 (36.59%), Postives = 187/317 (58.99%), Query Frame = 0


Query: 7   KELKVQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYKQLNKVTIRNKYPLPHI 66
           +E+   +Q+L+D  +I PS SP  +PV+ V KKDGT RLC+DY+ LNK TI + +PLP I
Sbjct: 636 QEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRI 695

Query: 67  DDLFDQLKGATLFSKINLRSRYHQLKVRESDIPKTAFRTRYGHYEFRVMPFGLTNARAVF 126
           D+L  ++  A +F+ ++L S YHQ+ +   D  KTAF T  G YE+ VMPFGL NA + F
Sbjct: 696 DNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTF 755

Query: 127 MDLMNRIFHQYLDQFVIVFIDDILVYSVDRKAHEEHLRIILHTLCDKQMYAKFRKCEFLL 186
              M   F     +FV V++DDIL++S   + H +HL  +L  L ++ +  K +KC+F  
Sbjct: 756 ARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFAS 815

Query: 187 EQVVFLGHVVSAKGVSVDPQKVEAIVNWERLTSATEVRSFLGLARYYRCFIKDFSRLALP 246
           E+  FLG+ +  + ++    K  AI ++    +  + + FLG+  YYR FI + S++A P
Sbjct: 816 EETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQP 875

Query: 247 LTALTRKNAKFEWSDRCEQSFKELKKRLVTAPILALPVTGK-DYVIYCDASRQGLGCVLM 306
           +        K +W+++ +++ ++LK  L  +P+L +P   K +Y +  DAS+ G+G VL 
Sbjct: 876 IQLFICD--KSQWTEKQDKAIEKLKAALCNSPVL-VPFNNKANYRLTTDASKDGIGAVLE 935

Query: 307 QYGN------VIAYASR 317
           +  N      V+ Y S+
Sbjct: 936 EVDNKNKLVGVVGYFSK 947

[Close]

BLAST of Cmc02g0049691 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 211.5 bits (537), Expect = 1.4e-53
Identity = 116/317 (36.59%), Postives = 186/317 (58.68%), Query Frame = 0


Query: 7   KELKVQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYKQLNKVTIRNKYPLPHI 66
           +E+   +Q+L+D  +I PS SP  +PV+ V KKDGT RLC+DY+ LNK TI + +PLP I
Sbjct: 610 QEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRI 669

Query: 67  DDLFDQLKGATLFSKINLRSRYHQLKVRESDIPKTAFRTRYGHYEFRVMPFGLTNARAVF 126
           D+L  ++  A +F+ ++L S YHQ+ +   D  KTAF T  G YE+ VMPFGL NA + F
Sbjct: 670 DNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTF 729

Query: 127 MDLMNRIFHQYLDQFVIVFIDDILVYSVDRKAHEEHLRIILHTLCDKQMYAKFRKCEFLL 186
              M   F     +FV V++DDIL++S   + H +HL  +L  L ++ +  K +KC+F  
Sbjct: 730 ARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFAS 789

Query: 187 EQVVFLGHVVSAKGVSVDPQKVEAIVNWERLTSATEVRSFLGLARYYRCFIKDFSRLALP 246
           E+  FLG+ +  + ++    K  AI ++    +  + + FLG+  YYR FI + S++A P
Sbjct: 790 EETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQP 849

Query: 247 LTALTRKNAKFEWSDRCEQSFKELKKRLVTAPILALPVTGK-DYVIYCDASRQGLGCVLM 306
           +        K +W+++ +++  +LK  L  +P+L +P   K +Y +  DAS+ G+G VL 
Sbjct: 850 IQLFICD--KSQWTEKQDKAIDKLKDALCNSPVL-VPFNNKANYRLTTDASKDGIGAVLE 909

Query: 307 QYGN------VIAYASR 317
           +  N      V+ Y S+
Sbjct: 910 EVDNKNKLVGVVGYFSK 921

[Close]

BLAST of Cmc02g0049691 vs. ExPASy TrEMBL
Match: A0A5A7T3K4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold510G00170 PE=4 SV=1)

HSP 1 Score: 577.4 bits (1487), Expect = 3.6e-161
Identity = 286/316 (90.51%), Postives = 300/316 (94.94%), Query Frame = 0


Query: 1   MAPIELKELKVQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYKQLNKVTIRNK 60
           MAP ELKELK+QLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDY+QLNKVTIRNK
Sbjct: 266 MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 325

Query: 61  YPLPHIDDLFDQLKGATLFSKINLRSRYHQLKVRESDIPKTAFRTRYGHYEFRVMPFGLT 120
           YPLP IDDLFDQL+GATLFSKI+LRS YHQLKVRESDI KTAFRTRYGHYEFRVMPFGLT
Sbjct: 326 YPLPRIDDLFDQLRGATLFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 385

Query: 121 NARAVFMDLMNRIFHQYLDQFVIVFIDDILVYSVDRKAHEEHLRIILHTLCDKQMYAKFR 180
           NA AVFMDLMNRIFH+YLDQFVIVFIDDILVYSVDR++HEEHLRI+L TL +KQ+YAKF 
Sbjct: 386 NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 445

Query: 181 KCEFLLEQVVFLGHVVSAKGVSVDPQKVEAIVNWERLTSATEVRSFLGLARYYRCFIKDF 240
           KCEF LEQVVFLGHVVSAKGVSVDPQKVEA+VNWER  SATEVRSFLGLA YYR FI+DF
Sbjct: 446 KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDF 505

Query: 241 SRLALPLTALTRKNAKFEWSDRCEQSFKELKKRLVTAPILALPVTGKDYVIYCDASRQGL 300
           SRLALPLTALTRKN KFEWSD+CEQSF+ELKKRLVTAPILALPVTGKDYVIYCDASR GL
Sbjct: 506 SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 565

Query: 301 GCVLMQYGNVIAYASR 317
           GCVLMQ GNVIAYASR
Sbjct: 566 GCVLMQDGNVIAYASR 581

[Close]

BLAST of Cmc02g0049691 vs. ExPASy TrEMBL
Match: A0A5A7U819 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G001730 PE=4 SV=1)

HSP 1 Score: 577.4 bits (1487), Expect = 3.6e-161
Identity = 286/316 (90.51%), Postives = 300/316 (94.94%), Query Frame = 0


Query: 1   MAPIELKELKVQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYKQLNKVTIRNK 60
           MAP ELKELK+QLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDY+QLNKVTIRNK
Sbjct: 326 MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 385

Query: 61  YPLPHIDDLFDQLKGATLFSKINLRSRYHQLKVRESDIPKTAFRTRYGHYEFRVMPFGLT 120
           YPLP IDDLFDQL+GATLFSKI+LRS YHQLKVRESDI KTAFRTRYGHYEFRVMPFGLT
Sbjct: 386 YPLPRIDDLFDQLRGATLFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 445

Query: 121 NARAVFMDLMNRIFHQYLDQFVIVFIDDILVYSVDRKAHEEHLRIILHTLCDKQMYAKFR 180
           NA AVFMDLMNRIFH+YLDQFVIVFIDDILVYSVDR++HEEHLRI+L TL +KQ+YAKF 
Sbjct: 446 NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 505

Query: 181 KCEFLLEQVVFLGHVVSAKGVSVDPQKVEAIVNWERLTSATEVRSFLGLARYYRCFIKDF 240
           KCEF LEQVVFLGHVVSAKGVSVDPQKVEA+VNWER  SATEVRSFLGLA YYR FI+DF
Sbjct: 506 KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDF 565

Query: 241 SRLALPLTALTRKNAKFEWSDRCEQSFKELKKRLVTAPILALPVTGKDYVIYCDASRQGL 300
           SRLALPLTALTRKN KFEWSD+CEQSF+ELKKRLVTAPILALPVTGKDYVIYCDASR GL
Sbjct: 566 SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 625

Query: 301 GCVLMQYGNVIAYASR 317
           GCVLMQ GNVIAYASR
Sbjct: 626 GCVLMQDGNVIAYASR 641

[Close]

BLAST of Cmc02g0049691 vs. ExPASy TrEMBL
Match: A0A5A7VNK4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold271G002190 PE=4 SV=1)

HSP 1 Score: 577.4 bits (1487), Expect = 3.6e-161
Identity = 286/316 (90.51%), Postives = 300/316 (94.94%), Query Frame = 0


Query: 1   MAPIELKELKVQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYKQLNKVTIRNK 60
           MAP ELKELK+QLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDY+QLNKVTIRNK
Sbjct: 665 MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 724

Query: 61  YPLPHIDDLFDQLKGATLFSKINLRSRYHQLKVRESDIPKTAFRTRYGHYEFRVMPFGLT 120
           YPLP IDDLFDQL+GATLFSKI+LRS YHQLKVRESDI KTAFRTRYGHYEFRVMPFGLT
Sbjct: 725 YPLPRIDDLFDQLRGATLFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 784

Query: 121 NARAVFMDLMNRIFHQYLDQFVIVFIDDILVYSVDRKAHEEHLRIILHTLCDKQMYAKFR 180
           NA AVFMDLMNRIFH+YLDQFVIVFIDDILVYSVDR++HEEHLRI+L TL +KQ+YAKF 
Sbjct: 785 NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 844

Query: 181 KCEFLLEQVVFLGHVVSAKGVSVDPQKVEAIVNWERLTSATEVRSFLGLARYYRCFIKDF 240
           KCEF LEQVVFLGHVVSAKGVSVDPQKVEA+VNWER  SATEVRSFLGLA YYR FI+DF
Sbjct: 845 KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDF 904

Query: 241 SRLALPLTALTRKNAKFEWSDRCEQSFKELKKRLVTAPILALPVTGKDYVIYCDASRQGL 300
           SRLALPLTALTRKN KFEWSD+CEQSF+ELKKRLVTAPILALPVTGKDYVIYCDASR GL
Sbjct: 905 SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 964

Query: 301 GCVLMQYGNVIAYASR 317
           GCVLMQ GNVIAYASR
Sbjct: 965 GCVLMQDGNVIAYASR 980

[Close]

BLAST of Cmc02g0049691 vs. ExPASy TrEMBL
Match: A0A5A7V4W9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold679G00400 PE=4 SV=1)

HSP 1 Score: 577.4 bits (1487), Expect = 3.6e-161
Identity = 286/316 (90.51%), Postives = 300/316 (94.94%), Query Frame = 0


Query: 1   MAPIELKELKVQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYKQLNKVTIRNK 60
           MAP ELKELK+QLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDY+QLNKVTIRNK
Sbjct: 563 MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 622

Query: 61  YPLPHIDDLFDQLKGATLFSKINLRSRYHQLKVRESDIPKTAFRTRYGHYEFRVMPFGLT 120
           YPLP IDDLFDQL+GATLFSKI+LRS YHQLKVRESDI KTAFRTRYGHYEFRVMPFGLT
Sbjct: 623 YPLPRIDDLFDQLRGATLFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 682

Query: 121 NARAVFMDLMNRIFHQYLDQFVIVFIDDILVYSVDRKAHEEHLRIILHTLCDKQMYAKFR 180
           NA AVFMDLMNRIFH+YLDQFVIVFIDDILVYSVDR++HEEHLRI+L TL +KQ+YAKF 
Sbjct: 683 NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 742

Query: 181 KCEFLLEQVVFLGHVVSAKGVSVDPQKVEAIVNWERLTSATEVRSFLGLARYYRCFIKDF 240
           KCEF LEQVVFLGHVVSAKGVSVDPQKVEA+VNWER  SATEVRSFLGLA YYR FI+DF
Sbjct: 743 KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDF 802

Query: 241 SRLALPLTALTRKNAKFEWSDRCEQSFKELKKRLVTAPILALPVTGKDYVIYCDASRQGL 300
           SRLALPLTALTRKN KFEWSD+CEQSF+ELKKRLVTAPILALPVTGKDYVIYCDASR GL
Sbjct: 803 SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 862

Query: 301 GCVLMQYGNVIAYASR 317
           GCVLMQ GNVIAYASR
Sbjct: 863 GCVLMQDGNVIAYASR 878

[Close]

BLAST of Cmc02g0049691 vs. ExPASy TrEMBL
Match: A0A5D3BS67 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold509G00050 PE=4 SV=1)

HSP 1 Score: 575.9 bits (1483), Expect = 1.1e-160
Identity = 285/316 (90.19%), Postives = 299/316 (94.62%), Query Frame = 0


Query: 1   MAPIELKELKVQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYKQLNKVTIRNK 60
           MAP ELKELK+QLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDY+QLNKVTIRNK
Sbjct: 665 MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 724

Query: 61  YPLPHIDDLFDQLKGATLFSKINLRSRYHQLKVRESDIPKTAFRTRYGHYEFRVMPFGLT 120
           YPLP IDDLFDQL+GA LFSKI+LRS YHQLKVRESDI KTAFRTRYGHYEFRVMPFGLT
Sbjct: 725 YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 784

Query: 121 NARAVFMDLMNRIFHQYLDQFVIVFIDDILVYSVDRKAHEEHLRIILHTLCDKQMYAKFR 180
           NA AVFMDLMNRIFH+YLDQFVIVFIDDILVYSVDR++HEEHLRI+L TL +KQ+YAKF 
Sbjct: 785 NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 844

Query: 181 KCEFLLEQVVFLGHVVSAKGVSVDPQKVEAIVNWERLTSATEVRSFLGLARYYRCFIKDF 240
           KCEF LEQVVFLGHVVSAKGVSVDPQKVEA+VNWER  SATEVRSFLGLA YYR FI+DF
Sbjct: 845 KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDF 904

Query: 241 SRLALPLTALTRKNAKFEWSDRCEQSFKELKKRLVTAPILALPVTGKDYVIYCDASRQGL 300
           SRLALPLTALTRKN KFEWSD+CEQSF+ELKKRLVTAPILALPVTGKDYVIYCDASR GL
Sbjct: 905 SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 964

Query: 301 GCVLMQYGNVIAYASR 317
           GCVLMQ GNVIAYASR
Sbjct: 965 GCVLMQNGNVIAYASR 980

[Close]

BLAST of Cmc02g0049691 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 108.6 bits (270), Expect = 9.2e-24
Identity = 53/124 (42.74%), Postives = 78/124 (62.90%), Query Frame = 0


Query: 162 HLRIILHTLCDKQMYAKFRKCEFLLEQVVFLG--HVVSAKGVSVDPQKVEAIVNWERLTS 221
           HL ++L      Q YA  +KC F   Q+ +LG  H++S +GVS DP K+EA+V W    +
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 222 ATEVRSFLGLARYYRCFIKDFSRLALPLTALTRKNAKFEWSDRCEQSFKELKKRLVTAPI 281
            TE+R FLGL  YYR F+K++ ++  PLT L +KN+  +W++    +FK LK  + T P+
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS-LKWTEMAALAFKALKGAVTTLPV 122

Query: 282 LALP 284
           LALP
Sbjct: 123 LALP 125

The following BLAST results are available for this feature:

BLAST of Cmc02g0049691 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0050527.1	7.5e-161	90.51	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0066849.1	7.5e-161	90.51	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0062270.1	7.5e-161	90.51	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0036676.1	7.5e-161	90.51	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
TYK06334.1	2.2e-160	90.19	putative polyprotein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc02g0049691 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P20825	7.0e-61	38.29	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P04323	3.5e-60	36.39	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
Q8I7P9	1.3e-59	39.70	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]
Q7LHG5	8.3e-54	36.59	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q99315	1.4e-53	36.59	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]

BLAST of Cmc02g0049691 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T3K4	3.6e-161	90.51	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold51...	[more]
A0A5A7U819	3.6e-161	90.51	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17...	[more]
A0A5A7VNK4	3.6e-161	90.51	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold27...	[more]
A0A5A7V4W9	3.6e-161	90.51	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67...	[more]
A0A5D3BS67	1.1e-160	90.19	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold50...	[more]

BLAST of Cmc02g0049691 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	9.2e-24	42.74	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 36..195 e-value: 1.4E-22 score: 80.3
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 17..196 score: 11.458491
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 206..291 e-value: 8.6E-30 score: 104.6
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 61..196 e-value: 1.6E-79 score: 268.2
IPR041577	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	PFAM	PF17919	RT_RNaseH_2	coord: 259..316 e-value: 8.6E-16 score: 57.8
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 2..121 e-value: 1.6E-79 score: 268.2
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 11..309
None	No IPR available	PANTHER	PTHR24559:SF324	TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 11..309
None	No IPR available	CDD	cd01647	RT_LTR	coord: 20..196 e-value: 6.87842E-86 score: 254.057
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..316

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc02g0049691.1	Cmc02g0049691.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding