Cmc02g0049541 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc02g0049541
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Gag/pol protein
Location	CMiso1.1chr02: 15220837 .. 15221784 (+)
RNA-Seq Expression	Cmc02g0049541
Synteny	Cmc02g0049541

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGCATAAGTCTGAAGCTCTTGAAAAGTTCAAGGAGTACAAGACTGAAGTTGAAAATCTATTAAGTAAAAAGATTAAAATACTTCGGTCTGATCGAGGTGGAGAGTACATGGATTTGAGATTCCAGGACTATATGATAGAACATGGAATCCAATCCCAACTCTCAGCACCTGGTACACCTCAACAAAATGGTGTATCAAAAAGGAGAAATAAAACCTTGTTAGACATGGTTCGTTCAATGATGAGTTATGCTCAATTGCCTAGCTCGTTTTGGGGGTATGCAGTAGAGACTGTAGTTCATATCTTGAATAATGTTCCTTCAAAGAGTGTTTCTGAAACACCTTCAAAGTTATGGAGAGGACGTAAGCCTAGTTTAAGTCATTTCAAAATTTGGGGCTGTCCAACACACATGTTAGTGACAAACCCCAAGAACTTGGAACCTCGTTCAAGGTTATGCCAATTAGTTGGTTACCCTAAAGAGACGAGATGTAGTATATTCTTCGATCCACAAGAAAATAGAGTGTTTGTATCGACAAATGCTACTTTCTTGGAAGAAGACCACATGAGAGATCATAAACCACGAAGCAAATTAATATTAAATGAAGCTACTGATGAATCAACAAGGGTTTTTGATGAAGTTGGTCCCTCGTCAAGAGTTGATGAAACCACCACATCAGGTCAATCTCATCCTTCTCAATTGTTGAGAATGCCTCGACGCAGTGGGAGGGTTGTATCACGACCTAACCATTATTTGGGTTTAACTGAAACTCAGGTTGTCATACCAGATGATGGTATTGAGGATCCATTATACTTTAAACAGGCAATGAATGATGTAGATAAGGACCAATGGGTCAAAGCCATGGACCTTGAAATGAAGTCTATGTACTTCAATTCAATGTGGGAGCTTGTAGATCTACCTGAAGGGGTAAAACCTATAGAGTGTTAA

mRNA sequence

ATGAAGCATAAGTCTGAAGCTCTTGAAAAGTTCAAGGAGTACAAGACTGAAGTTGAAAATCTATTAAGTAAAAAGATTAAAATACTTCGGTCTGATCGAGGTGGAGAGTACATGGATTTGAGATTCCAGGACTATATGATAGAACATGGAATCCAATCCCAACTCTCAGCACCTGGTACACCTCAACAAAATGGTGTATCAAAAAGGAGAAATAAAACCTTGTTAGACATGGTTCGTTCAATGATGAGTTATGCTCAATTGCCTAGCTCGTTTTGGGGGTATGCAGTAGAGACTGTAGTTCATATCTTGAATAATGTTCCTTCAAAGAGTGTTTCTGAAACACCTTCAAAGTTATGGAGAGGACGTAAGCCTAGTTTAAGTCATTTCAAAATTTGGGGCTGTCCAACACACATGTTAGTGACAAACCCCAAGAACTTGGAACCTCGTTCAAGGTTATGCCAATTAGTTGGTTACCCTAAAGAGACGAGATGTAGTATATTCTTCGATCCACAAGAAAATAGAGTGTTTGTATCGACAAATGCTACTTTCTTGGAAGAAGACCACATGAGAGATCATAAACCACGAAGCAAATTAATATTAAATGAAGCTACTGATGAATCAACAAGGGTTTTTGATGAAGTTGGTCCCTCGTCAAGAGTTGATGAAACCACCACATCAGGTCAATCTCATCCTTCTCAATTGTTGAGAATGCCTCGACGCAGTGGGAGGGTTGTATCACGACCTAACCATTATTTGGGTTTAACTGAAACTCAGGTTGTCATACCAGATGATGGTATTGAGGATCCATTATACTTTAAACAGGCAATGAATGATGTAGATAAGGACCAATGGGTCAAAGCCATGGACCTTGAAATGAAGTCTATGTACTTCAATTCAATGTGGGAGCTTGTAGATCTACCTGAAGGGGTAAAACCTATAGAGTGTTAA

Coding sequence (CDS)

ATGAAGCATAAGTCTGAAGCTCTTGAAAAGTTCAAGGAGTACAAGACTGAAGTTGAAAATCTATTAAGTAAAAAGATTAAAATACTTCGGTCTGATCGAGGTGGAGAGTACATGGATTTGAGATTCCAGGACTATATGATAGAACATGGAATCCAATCCCAACTCTCAGCACCTGGTACACCTCAACAAAATGGTGTATCAAAAAGGAGAAATAAAACCTTGTTAGACATGGTTCGTTCAATGATGAGTTATGCTCAATTGCCTAGCTCGTTTTGGGGGTATGCAGTAGAGACTGTAGTTCATATCTTGAATAATGTTCCTTCAAAGAGTGTTTCTGAAACACCTTCAAAGTTATGGAGAGGACGTAAGCCTAGTTTAAGTCATTTCAAAATTTGGGGCTGTCCAACACACATGTTAGTGACAAACCCCAAGAACTTGGAACCTCGTTCAAGGTTATGCCAATTAGTTGGTTACCCTAAAGAGACGAGATGTAGTATATTCTTCGATCCACAAGAAAATAGAGTGTTTGTATCGACAAATGCTACTTTCTTGGAAGAAGACCACATGAGAGATCATAAACCACGAAGCAAATTAATATTAAATGAAGCTACTGATGAATCAACAAGGGTTTTTGATGAAGTTGGTCCCTCGTCAAGAGTTGATGAAACCACCACATCAGGTCAATCTCATCCTTCTCAATTGTTGAGAATGCCTCGACGCAGTGGGAGGGTTGTATCACGACCTAACCATTATTTGGGTTTAACTGAAACTCAGGTTGTCATACCAGATGATGGTATTGAGGATCCATTATACTTTAAACAGGCAATGAATGATGTAGATAAGGACCAATGGGTCAAAGCCATGGACCTTGAAATGAAGTCTATGTACTTCAATTCAATGTGGGAGCTTGTAGATCTACCTGAAGGGGTAAAACCTATAGAGTGTTAA

Protein sequence

MKHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSKRRNKTLLDMVRSMMSYAQLPSSFWGYAVETVVHILNNVPSKSVSETPSKLWRGRKPSLSHFKIWGCPTHMLVTNPKNLEPRSRLCQLVGYPKETRCSIFFDPQENRVFVSTNATFLEEDHMRDHKPRSKLILNEATDESTRVFDEVGPSSRVDETTTSGQSHPSQLLRMPRRSGRVVSRPNHYLGLTETQVVIPDDGIEDPLYFKQAMNDVDKDQWVKAMDLEMKSMYFNSMWELVDLPEGVKPIEC

Homology

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BLAST of Cmc02g0049541 vs. NCBI nr
Match: KAA0046800.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 631.7 bits (1628), Expect = 3.4e-177
Identity = 309/311 (99.36%), Postives = 311/311 (100.00%), Query Frame = 0


Query: 1   MKHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT 60
           MKHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT
Sbjct: 1   MKHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT 60

Query: 61  PQQNGVSKRRNKTLLDMVRSMMSYAQLPSSFWGYAVETVVHILNNVPSKSVSETPSKLWR 120
           PQQNGVSKRRNKTLLDMVRSMMSYAQLPSSFWGYAVETVVHILNNVPSKSVSETPSKLWR
Sbjct: 61  PQQNGVSKRRNKTLLDMVRSMMSYAQLPSSFWGYAVETVVHILNNVPSKSVSETPSKLWR 120

Query: 121 GRKPSLSHFKIWGCPTHMLVTNPKNLEPRSRLCQLVGYPKETRCSIFFDPQENRVFVSTN 180
           GRKPSLSHFKIWGCPTHMLVTNPKNLEPRSRLCQLVGYPKETRCSIFFDPQENRVFVSTN
Sbjct: 121 GRKPSLSHFKIWGCPTHMLVTNPKNLEPRSRLCQLVGYPKETRCSIFFDPQENRVFVSTN 180

Query: 181 ATFLEEDHMRDHKPRSKLILNEATDESTRVFDEVGPSSRVDETTTSGQSHPSQLLRMPRR 240
           ATFLEEDHMRDHKPRSKLILNEATDESTRVFDEVGPSSRVDETTTSGQSHPSQLLRMPRR
Sbjct: 181 ATFLEEDHMRDHKPRSKLILNEATDESTRVFDEVGPSSRVDETTTSGQSHPSQLLRMPRR 240

Query: 241 SGRVVSRPNHYLGLTETQVVIPDDGIEDPLYFKQAMNDVDKDQWVKAMDLEMKSMYFNSM 300
           SGRVVSRPNHYLGLTETQVVIPDDGIEDPLYFKQAMNDVDKDQWVKAMDLEMKSMYFNSM
Sbjct: 241 SGRVVSRPNHYLGLTETQVVIPDDGIEDPLYFKQAMNDVDKDQWVKAMDLEMKSMYFNSM 300

Query: 301 WELVDLPEGVK 312
           WELVDLPEG++
Sbjct: 301 WELVDLPEGLE 311

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BLAST of Cmc02g0049541 vs. NCBI nr
Match: KAA0025945.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0035786.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0040492.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0041262.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 594.7 bits (1532), Expect = 4.5e-166
Identity = 288/315 (91.43%), Postives = 303/315 (96.19%), Query Frame = 0


Query: 1   MKHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT 60
           M+HKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT
Sbjct: 445 MEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT 504

Query: 61  PQQNGVSKRRNKTLLDMVRSMMSYAQLPSSFWGYAVETVVHILNNVPSKSVSETPSKLWR 120
           PQQNGVS+RRN+TLLDMVRSMMSYAQLPSSFWGYAVET VHILNNVPSKSVSETP +LWR
Sbjct: 505 PQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWR 564

Query: 121 GRKPSLSHFKIWGCPTHMLVTNPKNLEPRSRLCQLVGYPKETRCSIFFDPQENRVFVSTN 180
           GRKPSLSHF+IWGCP H+LVTNPK LEPRSRLCQ VGYPKETR  +FFDPQENRVFVSTN
Sbjct: 565 GRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTN 624

Query: 181 ATFLEEDHMRDHKPRSKLILNEATDESTRVFDEVGPSSRVDETTTSGQSHPSQLLRMPRR 240
           ATFLEEDHMR+HKPRSKL+L+EATDESTRV DEVGPSSRVDETTTSGQSHPSQ LRMPRR
Sbjct: 625 ATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRR 684

Query: 241 SGRVVSRPNHYLGLTETQVVIPDDGIEDPLYFKQAMNDVDKDQWVKAMDLEMKSMYFNSM 300
           SGRVVS+PN YLGLTETQVVIPDDG+EDPL +KQAMNDVDKDQWVKAMDLEM+SMYFNS+
Sbjct: 685 SGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSV 744

Query: 301 WELVDLPEGVKPIEC 316
           WELVDLPEGVKPI C
Sbjct: 745 WELVDLPEGVKPIGC 759

[Close]

BLAST of Cmc02g0049541 vs. NCBI nr
Match: KAA0059226.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 594.7 bits (1532), Expect = 4.5e-166
Identity = 288/315 (91.43%), Postives = 303/315 (96.19%), Query Frame = 0


Query: 1   MKHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT 60
           M+HKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT
Sbjct: 319 MEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT 378

Query: 61  PQQNGVSKRRNKTLLDMVRSMMSYAQLPSSFWGYAVETVVHILNNVPSKSVSETPSKLWR 120
           PQQNGVS+RRN+TLLDMVRSMMSYAQLPSSFWGYAVET VHILNNVPSKSVSETP +LWR
Sbjct: 379 PQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWR 438

Query: 121 GRKPSLSHFKIWGCPTHMLVTNPKNLEPRSRLCQLVGYPKETRCSIFFDPQENRVFVSTN 180
           GRKPSLSHF+IWGCP H+LVTNPK LEPRSRLCQ VGYPKETR  +FFDPQENRVFVSTN
Sbjct: 439 GRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTN 498

Query: 181 ATFLEEDHMRDHKPRSKLILNEATDESTRVFDEVGPSSRVDETTTSGQSHPSQLLRMPRR 240
           ATFLEEDHMR+HKPRSKL+L+EATDESTRV DEVGPSSRVDETTTSGQSHPSQ LRMPRR
Sbjct: 499 ATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRR 558

Query: 241 SGRVVSRPNHYLGLTETQVVIPDDGIEDPLYFKQAMNDVDKDQWVKAMDLEMKSMYFNSM 300
           SGRVVS+PN YLGLTETQVVIPDDG+EDPL +KQAMNDVDKDQWVKAMDLEM+SMYFNS+
Sbjct: 559 SGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSV 618

Query: 301 WELVDLPEGVKPIEC 316
           WELVDLPEGVKPI C
Sbjct: 619 WELVDLPEGVKPIGC 633

[Close]

BLAST of Cmc02g0049541 vs. NCBI nr
Match: TYK02840.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 594.7 bits (1532), Expect = 4.5e-166
Identity = 288/315 (91.43%), Postives = 303/315 (96.19%), Query Frame = 0


Query: 1   MKHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT 60
           M+HKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT
Sbjct: 319 MEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT 378

Query: 61  PQQNGVSKRRNKTLLDMVRSMMSYAQLPSSFWGYAVETVVHILNNVPSKSVSETPSKLWR 120
           PQQNGVS+RRN+TLLDMVRSMMSYAQLPSSFWGYAVET VHILNNVPSKSVSETP +LWR
Sbjct: 379 PQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWR 438

Query: 121 GRKPSLSHFKIWGCPTHMLVTNPKNLEPRSRLCQLVGYPKETRCSIFFDPQENRVFVSTN 180
           GRKPSLSHF+IWGCP H+LVTNPK LEPRSRLCQ VGYPKETR  +FFDPQENRVFVSTN
Sbjct: 439 GRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTN 498

Query: 181 ATFLEEDHMRDHKPRSKLILNEATDESTRVFDEVGPSSRVDETTTSGQSHPSQLLRMPRR 240
           ATFLEEDHMR+HKPRSKL+L+EATDESTRV DEVGPSSRVDETTTSGQSHPSQ LRMPRR
Sbjct: 499 ATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRR 558

Query: 241 SGRVVSRPNHYLGLTETQVVIPDDGIEDPLYFKQAMNDVDKDQWVKAMDLEMKSMYFNSM 300
           SGRVVS+PN YLGLTETQVVIPDDG+EDPL +KQAMNDVDKDQWVKAMDLEM+SMYFNS+
Sbjct: 559 SGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSV 618

Query: 301 WELVDLPEGVKPIEC 316
           WELVDLPEGVKPI C
Sbjct: 619 WELVDLPEGVKPIGC 633

[Close]

BLAST of Cmc02g0049541 vs. NCBI nr
Match: KAA0035907.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 588.6 bits (1516), Expect = 3.3e-164
Identity = 285/315 (90.48%), Postives = 301/315 (95.56%), Query Frame = 0


Query: 1   MKHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT 60
           M+HKSEALEKFKEYKTEVENLLSKKIKI RSDRGGEYMDL FQDYMIEHGIQSQLSAPGT
Sbjct: 445 MEHKSEALEKFKEYKTEVENLLSKKIKIFRSDRGGEYMDLIFQDYMIEHGIQSQLSAPGT 504

Query: 61  PQQNGVSKRRNKTLLDMVRSMMSYAQLPSSFWGYAVETVVHILNNVPSKSVSETPSKLWR 120
           PQQNGVS+RRN+TLLDMVRSMMSYAQLPSSFWGYAVET VHILNNVPSKSVSETP +LWR
Sbjct: 505 PQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWR 564

Query: 121 GRKPSLSHFKIWGCPTHMLVTNPKNLEPRSRLCQLVGYPKETRCSIFFDPQENRVFVSTN 180
           GRKPSLSHF+IWGCP H+LVTNPK LEPRSRLCQ VGYPKETR  +FFDP+ENRVFVSTN
Sbjct: 565 GRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPKENRVFVSTN 624

Query: 181 ATFLEEDHMRDHKPRSKLILNEATDESTRVFDEVGPSSRVDETTTSGQSHPSQLLRMPRR 240
           ATFLEEDHMR+HKPRSKL+L+EATDESTRV DEVGPSSRVDETTTSGQSHPSQ LRMPRR
Sbjct: 625 ATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRR 684

Query: 241 SGRVVSRPNHYLGLTETQVVIPDDGIEDPLYFKQAMNDVDKDQWVKAMDLEMKSMYFNSM 300
           SGRVVS+PN YLGLTETQVVIPDDG+EDPL +KQAMNDVDKDQWVKAMDLEM+SMYFNS+
Sbjct: 685 SGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSV 744

Query: 301 WELVDLPEGVKPIEC 316
           WELVDLPEGVKPI C
Sbjct: 745 WELVDLPEGVKPIGC 759

[Close]

BLAST of Cmc02g0049541 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 2.8e-41
Identity = 110/344 (31.98%), Postives = 178/344 (51.74%), Query Frame = 0


Query: 1   MKHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT 60
           +K K +  + F+++   VE    +K+K LRSD GGEY    F++Y   HGI+ + + PGT
Sbjct: 519 LKTKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGT 578

Query: 61  PQQNGVSKRRNKTLLDMVRSMMSYAQLPSSFWGYAVETVVHILNNVPSKSVS-ETPSKLW 120
           PQ NGV++R N+T+++ VRSM+  A+LP SFWG AV+T  +++N  PS  ++ E P ++W
Sbjct: 579 PQHNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVW 638

Query: 121 RGRKPSLSHFKIWGCP--THMLVTNPKNLEPRSRLCQLVGYPKETRCSIFFDPQENRVFV 180
             ++ S SH K++GC    H+       L+ +S  C  +GY  E      +DP + +V  
Sbjct: 639 TNKEVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIR 698

Query: 181 STNATFLEEDHM----RDHKPRSKLILNEATDESTRVFDEVGPSSRVDETTTSGQ----- 240
           S +  F E +         K ++ +I N  T  ST   +     S  DE +  G+     
Sbjct: 699 SRDVVFRESEVRTAADMSEKVKNGIIPNFVTIPSTS-NNPTSAESTTDEVSEQGEQPGEV 758

Query: 241 --------------SHPSQ---LLRMPRRSGRVVSRPNHYLGLTETQVVIPDDGIEDPLY 300
                          HP+Q     +  RRS R       Y   +   V+I DD   +P  
Sbjct: 759 IEQGEQLDEGVEEVEHPTQGEEQHQPLRRSERPRVESRRY--PSTEYVLISDD--REPES 818

Query: 301 FKQAMNDVDKDQWVKAMDLEMKSMYFNSMWELVDLPEGVKPIEC 316
            K+ ++  +K+Q +KAM  EM+S+  N  ++LV+LP+G +P++C
Sbjct: 819 LKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKC 857

[Close]

BLAST of Cmc02g0049541 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 107.8 bits (268), Expect = 2.2e-22
Identity = 53/162 (32.72%), Postives = 95/162 (58.64%), Query Frame = 0


Query: 1   MKHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT 60
           +K+KS+    F+++  + E   + K+  L  D G EY+    + + ++ GI   L+ P T
Sbjct: 519 IKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHT 578

Query: 61  PQQNGVSKRRNKTLLDMVRSMMSYAQLPSSFWGYAVETVVHILNNVPSKSV---SETPSK 120
           PQ NGVS+R  +T+ +  R+M+S A+L  SFWG AV T  +++N +PS+++   S+TP +
Sbjct: 579 PQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYE 638

Query: 121 LWRGRKPSLSHFKIWGCPTHMLVTNPK-NLEPRSRLCQLVGY 159
           +W  +KP L H +++G   ++ + N +   + +S     VGY
Sbjct: 639 MWHNKKPYLKHLRVFGATVYVHIKNKQGKFDDKSFKSIFVGY 680

[Close]

BLAST of Cmc02g0049541 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 2.2e-22
Identity = 57/188 (30.32%), Postives = 105/188 (55.85%), Query Frame = 0


Query: 1   MKHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT 60
           +K KS+  + F  +K+ VEN    +I  L SD GGE++ LR  DY+ +HGI    S P T
Sbjct: 540 LKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVVLR--DYLSQHGISHFTSPPHT 599

Query: 61  PQQNGVSKRRNKTLLDMVRSMMSYAQLPSSFWGYAVETVVHILNNVPSKSVS-ETPSKLW 120
           P+ NG+S+R+++ +++M  +++S+A +P ++W YA    V+++N +P+  +  ++P +  
Sbjct: 600 PEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKL 659

Query: 121 RGRKPSLSHFKIWGCPTH--MLVTNPKNLEPRSRLCQLVGYPKETRCSIFFDPQENRVFV 180
            G+ P+    K++GC  +  +   N   LE +S+ C  +GY       +       R++ 
Sbjct: 660 FGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYT 719

Query: 181 STNATFLE 186
           S +  F E
Sbjct: 720 SRHVQFDE 725

[Close]

BLAST of Cmc02g0049541 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 4.2e-21
Identity = 54/188 (28.72%), Postives = 102/188 (54.26%), Query Frame = 0


Query: 1   MKHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT 60
           +K KS+  E F  +K  +EN    +I    SD GGE++ L   +Y  +HGI    S P T
Sbjct: 561 LKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEFVAL--WEYFSQHGISHLTSPPHT 620

Query: 61  PQQNGVSKRRNKTLLDMVRSMMSYAQLPSSFWGYAVETVVHILNNVPSKSVS-ETPSKLW 120
           P+ NG+S+R+++ +++   +++S+A +P ++W YA    V+++N +P+  +  E+P +  
Sbjct: 621 PEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQLESPFQKL 680

Query: 121 RGRKPSLSHFKIWGCPTH--MLVTNPKNLEPRSRLCQLVGYPKETRCSIFFDPQENRVFV 180
            G  P+    +++GC  +  +   N   L+ +SR C  +GY       +    Q +R+++
Sbjct: 681 FGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYI 740

Query: 181 STNATFLE 186
           S +  F E
Sbjct: 741 SRHVRFDE 746

[Close]

BLAST of Cmc02g0049541 vs. ExPASy Swiss-Prot
Match: P47024 (Transposon Ty4-J Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY4B-J PE=3 SV=3)

HSP 1 Score: 63.5 bits (153), Expect = 4.8e-09
Identity = 53/215 (24.65%), Postives = 99/215 (46.05%), Query Frame = 0


Query: 2   KHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTP 61
           K+    L + ++    VE    +K++ + SDRG E+ + + ++Y I  GI   L++    
Sbjct: 666 KNAETILAQVRKNIQYVETQFDRKVREINSDRGTEFTNDQIEEYFISKGIHHILTSTQDH 725

Query: 62  QQNGVSKRRNKTLLDMVRSMMSYAQLPSSFWGYAVETVVHILNNVPSKSVSETPSKLWRG 121
             NG ++R  +T++    +++  + L   FW YAV +  +I N +  KS  + P K    
Sbjct: 726 AANGRAERYIRTIITDATTLLRQSNLRVKFWEYAVTSATNIRNYLEHKSTGKLPLKA-IS 785

Query: 122 RKP---SLSHFKIWGCPTHMLVTNPKNLEPRSRLCQLVGYPKETRCSIFFDPQENRVFVS 181
           R+P    L  F  +G    +   N K L+P      ++     +    FF P +N++  S
Sbjct: 786 RQPVTVRLMSFLPFGEKGIIWNHNHKKLKPSGLPSIILCKDPNSYGYKFFIPSKNKIVTS 845

Query: 182 TNATFLEEDHMRDHKPRSKLILNEATDESTRVFDE 214
            N T    ++  D + R+   +N++   S+   DE
Sbjct: 846 DNYTI--PNYTMDGRVRNTQNINKSHQFSSDNDDE 877

[Close]

BLAST of Cmc02g0049541 vs. ExPASy TrEMBL
Match: A0A5A7TUI8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold216G00920 PE=4 SV=1)

HSP 1 Score: 631.7 bits (1628), Expect = 1.6e-177
Identity = 309/311 (99.36%), Postives = 311/311 (100.00%), Query Frame = 0


Query: 1   MKHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT 60
           MKHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT
Sbjct: 1   MKHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT 60

Query: 61  PQQNGVSKRRNKTLLDMVRSMMSYAQLPSSFWGYAVETVVHILNNVPSKSVSETPSKLWR 120
           PQQNGVSKRRNKTLLDMVRSMMSYAQLPSSFWGYAVETVVHILNNVPSKSVSETPSKLWR
Sbjct: 61  PQQNGVSKRRNKTLLDMVRSMMSYAQLPSSFWGYAVETVVHILNNVPSKSVSETPSKLWR 120

Query: 121 GRKPSLSHFKIWGCPTHMLVTNPKNLEPRSRLCQLVGYPKETRCSIFFDPQENRVFVSTN 180
           GRKPSLSHFKIWGCPTHMLVTNPKNLEPRSRLCQLVGYPKETRCSIFFDPQENRVFVSTN
Sbjct: 121 GRKPSLSHFKIWGCPTHMLVTNPKNLEPRSRLCQLVGYPKETRCSIFFDPQENRVFVSTN 180

Query: 181 ATFLEEDHMRDHKPRSKLILNEATDESTRVFDEVGPSSRVDETTTSGQSHPSQLLRMPRR 240
           ATFLEEDHMRDHKPRSKLILNEATDESTRVFDEVGPSSRVDETTTSGQSHPSQLLRMPRR
Sbjct: 181 ATFLEEDHMRDHKPRSKLILNEATDESTRVFDEVGPSSRVDETTTSGQSHPSQLLRMPRR 240

Query: 241 SGRVVSRPNHYLGLTETQVVIPDDGIEDPLYFKQAMNDVDKDQWVKAMDLEMKSMYFNSM 300
           SGRVVSRPNHYLGLTETQVVIPDDGIEDPLYFKQAMNDVDKDQWVKAMDLEMKSMYFNSM
Sbjct: 241 SGRVVSRPNHYLGLTETQVVIPDDGIEDPLYFKQAMNDVDKDQWVKAMDLEMKSMYFNSM 300

Query: 301 WELVDLPEGVK 312
           WELVDLPEG++
Sbjct: 301 WELVDLPEGLE 311

[Close]

BLAST of Cmc02g0049541 vs. ExPASy TrEMBL
Match: A0A5A7TZD0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00090 PE=4 SV=1)

HSP 1 Score: 594.7 bits (1532), Expect = 2.2e-166
Identity = 288/315 (91.43%), Postives = 303/315 (96.19%), Query Frame = 0


Query: 1   MKHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT 60
           M+HKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT
Sbjct: 445 MEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT 504

Query: 61  PQQNGVSKRRNKTLLDMVRSMMSYAQLPSSFWGYAVETVVHILNNVPSKSVSETPSKLWR 120
           PQQNGVS+RRN+TLLDMVRSMMSYAQLPSSFWGYAVET VHILNNVPSKSVSETP +LWR
Sbjct: 505 PQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWR 564

Query: 121 GRKPSLSHFKIWGCPTHMLVTNPKNLEPRSRLCQLVGYPKETRCSIFFDPQENRVFVSTN 180
           GRKPSLSHF+IWGCP H+LVTNPK LEPRSRLCQ VGYPKETR  +FFDPQENRVFVSTN
Sbjct: 565 GRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTN 624

Query: 181 ATFLEEDHMRDHKPRSKLILNEATDESTRVFDEVGPSSRVDETTTSGQSHPSQLLRMPRR 240
           ATFLEEDHMR+HKPRSKL+L+EATDESTRV DEVGPSSRVDETTTSGQSHPSQ LRMPRR
Sbjct: 625 ATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRR 684

Query: 241 SGRVVSRPNHYLGLTETQVVIPDDGIEDPLYFKQAMNDVDKDQWVKAMDLEMKSMYFNSM 300
           SGRVVS+PN YLGLTETQVVIPDDG+EDPL +KQAMNDVDKDQWVKAMDLEM+SMYFNS+
Sbjct: 685 SGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSV 744

Query: 301 WELVDLPEGVKPIEC 316
           WELVDLPEGVKPI C
Sbjct: 745 WELVDLPEGVKPIGC 759

[Close]

BLAST of Cmc02g0049541 vs. ExPASy TrEMBL
Match: A0A5D3BUN8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold218G00360 PE=4 SV=1)

HSP 1 Score: 594.7 bits (1532), Expect = 2.2e-166
Identity = 288/315 (91.43%), Postives = 303/315 (96.19%), Query Frame = 0


Query: 1   MKHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT 60
           M+HKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT
Sbjct: 319 MEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT 378

Query: 61  PQQNGVSKRRNKTLLDMVRSMMSYAQLPSSFWGYAVETVVHILNNVPSKSVSETPSKLWR 120
           PQQNGVS+RRN+TLLDMVRSMMSYAQLPSSFWGYAVET VHILNNVPSKSVSETP +LWR
Sbjct: 379 PQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWR 438

Query: 121 GRKPSLSHFKIWGCPTHMLVTNPKNLEPRSRLCQLVGYPKETRCSIFFDPQENRVFVSTN 180
           GRKPSLSHF+IWGCP H+LVTNPK LEPRSRLCQ VGYPKETR  +FFDPQENRVFVSTN
Sbjct: 439 GRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTN 498

Query: 181 ATFLEEDHMRDHKPRSKLILNEATDESTRVFDEVGPSSRVDETTTSGQSHPSQLLRMPRR 240
           ATFLEEDHMR+HKPRSKL+L+EATDESTRV DEVGPSSRVDETTTSGQSHPSQ LRMPRR
Sbjct: 499 ATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRR 558

Query: 241 SGRVVSRPNHYLGLTETQVVIPDDGIEDPLYFKQAMNDVDKDQWVKAMDLEMKSMYFNSM 300
           SGRVVS+PN YLGLTETQVVIPDDG+EDPL +KQAMNDVDKDQWVKAMDLEM+SMYFNS+
Sbjct: 559 SGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSV 618

Query: 301 WELVDLPEGVKPIEC 316
           WELVDLPEGVKPI C
Sbjct: 619 WELVDLPEGVKPIGC 633

[Close]

BLAST of Cmc02g0049541 vs. ExPASy TrEMBL
Match: A0A5A7UYE8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001570 PE=4 SV=1)

HSP 1 Score: 594.7 bits (1532), Expect = 2.2e-166
Identity = 288/315 (91.43%), Postives = 303/315 (96.19%), Query Frame = 0


Query: 1   MKHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT 60
           M+HKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT
Sbjct: 319 MEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT 378

Query: 61  PQQNGVSKRRNKTLLDMVRSMMSYAQLPSSFWGYAVETVVHILNNVPSKSVSETPSKLWR 120
           PQQNGVS+RRN+TLLDMVRSMMSYAQLPSSFWGYAVET VHILNNVPSKSVSETP +LWR
Sbjct: 379 PQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWR 438

Query: 121 GRKPSLSHFKIWGCPTHMLVTNPKNLEPRSRLCQLVGYPKETRCSIFFDPQENRVFVSTN 180
           GRKPSLSHF+IWGCP H+LVTNPK LEPRSRLCQ VGYPKETR  +FFDPQENRVFVSTN
Sbjct: 439 GRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTN 498

Query: 181 ATFLEEDHMRDHKPRSKLILNEATDESTRVFDEVGPSSRVDETTTSGQSHPSQLLRMPRR 240
           ATFLEEDHMR+HKPRSKL+L+EATDESTRV DEVGPSSRVDETTTSGQSHPSQ LRMPRR
Sbjct: 499 ATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRR 558

Query: 241 SGRVVSRPNHYLGLTETQVVIPDDGIEDPLYFKQAMNDVDKDQWVKAMDLEMKSMYFNSM 300
           SGRVVS+PN YLGLTETQVVIPDDG+EDPL +KQAMNDVDKDQWVKAMDLEM+SMYFNS+
Sbjct: 559 SGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSV 618

Query: 301 WELVDLPEGVKPIEC 316
           WELVDLPEGVKPI C
Sbjct: 619 WELVDLPEGVKPIGC 633

[Close]

BLAST of Cmc02g0049541 vs. ExPASy TrEMBL
Match: A0A5A7T2V9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760 PE=4 SV=1)

HSP 1 Score: 588.6 bits (1516), Expect = 1.6e-164
Identity = 285/315 (90.48%), Postives = 301/315 (95.56%), Query Frame = 0


Query: 1   MKHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGT 60
           M+HKSEALEKFKEYKTEVENLLSKKIKI RSDRGGEYMDL FQDYMIEHGIQSQLSAPGT
Sbjct: 445 MEHKSEALEKFKEYKTEVENLLSKKIKIFRSDRGGEYMDLIFQDYMIEHGIQSQLSAPGT 504

Query: 61  PQQNGVSKRRNKTLLDMVRSMMSYAQLPSSFWGYAVETVVHILNNVPSKSVSETPSKLWR 120
           PQQNGVS+RRN+TLLDMVRSMMSYAQLPSSFWGYAVET VHILNNVPSKSVSETP +LWR
Sbjct: 505 PQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWR 564

Query: 121 GRKPSLSHFKIWGCPTHMLVTNPKNLEPRSRLCQLVGYPKETRCSIFFDPQENRVFVSTN 180
           GRKPSLSHF+IWGCP H+LVTNPK LEPRSRLCQ VGYPKETR  +FFDP+ENRVFVSTN
Sbjct: 565 GRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPKENRVFVSTN 624

Query: 181 ATFLEEDHMRDHKPRSKLILNEATDESTRVFDEVGPSSRVDETTTSGQSHPSQLLRMPRR 240
           ATFLEEDHMR+HKPRSKL+L+EATDESTRV DEVGPSSRVDETTTSGQSHPSQ LRMPRR
Sbjct: 625 ATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRR 684

Query: 241 SGRVVSRPNHYLGLTETQVVIPDDGIEDPLYFKQAMNDVDKDQWVKAMDLEMKSMYFNSM 300
           SGRVVS+PN YLGLTETQVVIPDDG+EDPL +KQAMNDVDKDQWVKAMDLEM+SMYFNS+
Sbjct: 685 SGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSV 744

Query: 301 WELVDLPEGVKPIEC 316
           WELVDLPEGVKPI C
Sbjct: 745 WELVDLPEGVKPIGC 759

[Close]

BLAST of Cmc02g0049541 vs. TAIR 10
Match: ATMG00710.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 55.8 bits (133), Expect = 7.1e-08
Identity = 27/82 (32.93%), Postives = 48/82 (58.54%), Query Frame = 0


Query: 71  NKTLLDMVRSMMSYAQLPSSFWGYAVETVVHILNNVPSKSVS-ETPSKLWRGRKPSLSHF 130
           N+T+++ VRSM+    LP +F   A  T VHI+N  PS +++   P ++W    P+ S+ 
Sbjct: 2   NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61

Query: 131 KIWGCPTHMLVTNPKNLEPRSR 152
           + +GC  ++     K L+PR++
Sbjct: 62  RRFGCVAYIHCDEGK-LKPRAK 82

The following BLAST results are available for this feature:

BLAST of Cmc02g0049541 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0046800.1	3.4e-177	99.36	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0025945.1	4.5e-166	91.43	gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumi...	[more]
KAA0059226.1	4.5e-166	91.43	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYK02840.1	4.5e-166	91.43	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0035907.1	3.3e-164	90.48	gag/pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc02g0049541 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	2.8e-41	31.98	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	2.2e-22	32.72	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q9ZT94	2.2e-22	30.32	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	4.2e-21	28.72	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P47024	4.8e-09	24.65	Transposon Ty4-J Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]

BLAST of Cmc02g0049541 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TUI8	1.6e-177	99.36	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold216G0092...	[more]
A0A5A7TZD0	2.2e-166	91.43	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G000...	[more]
A0A5D3BUN8	2.2e-166	91.43	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold218G0036...	[more]
A0A5A7UYE8	2.2e-166	91.43	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G0015...	[more]
A0A5A7T2V9	1.6e-164	90.48	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760...	[more]

BLAST of Cmc02g0049541 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00710.1	7.1e-08	32.93	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 4..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 213..240
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 218..235
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 4..311
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 1..136 e-value: 1.4E-25 score: 91.8
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 1..123 score: 16.977318
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 3..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc02g0049541.1	Cmc02g0049541.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding