Cmc02g0048591 (gene) Melon (Charmono) v1.1

Overview
NameCmc02g0048591
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTransport membrane protein
LocationCMiso1.1chr02: 14102325 .. 14102537 (-)
RNA-Seq ExpressionCmc02g0048591
SyntenyCmc02g0048591
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAACACAATCTCTTCCTCTATTTAAGTGGTTCTCGCTTCTCCTTATTCCTCTTCCTAACTCTTGCCCGGGTAGTTCCTAATGTTTGGCACTATCCATACTTTGTGGGTGCAAAATCAACAAATTTTCTCATGATCAAGTTACAACCTAAGATCTATGACCATATTATGTTAACAGTTTGTATTTCGTTCATTCTACAGGTATGCTCCTAG

mRNA sequence

ATGAAACACAATCTCTTCCTCTATTTAAGTGGTTCTCGCTTCTCCTTATTCCTCTTCCTAACTCTTGCCCGGGTAGTTCCTAATGTTTGGCACTATCCATACTTTGTGGGTGCAAAATCAACAAATTTTCTCATGATCAAGTTACAACCTAAGATCTATGACCATATTATGTTAACAGTTTGTATTTCGTTCATTCTACAGGTATGCTCCTAG

Coding sequence (CDS)

ATGAAACACAATCTCTTCCTCTATTTAAGTGGTTCTCGCTTCTCCTTATTCCTCTTCCTAACTCTTGCCCGGGTAGTTCCTAATGTTTGGCACTATCCATACTTTGTGGGTGCAAAATCAACAAATTTTCTCATGATCAAGTTACAACCTAAGATCTATGACCATATTATGTTAACAGTTTGTATTTCGTTCATTCTACAGGTATGCTCCTAG

Protein sequence

MKHNLFLYLSGSRFSLFLFLTLARVVPNVWHYPYFVGAKSTNFLMIKLQPKIYDHIMLTVCISFILQVCS
Homology
[Close]
BLAST of Cmc02g0048591 vs. NCBI nr
Match: KAA0059749.1 (transport membrane protein [Cucumis melo var. makuwa])

HSP 1 Score: 124.4 bits (311), Expect = 3.9e-25
Identity = 62/69 (89.86%), Postives = 64/69 (92.75%), Query Frame = 0 

Query: 2   KHNLFLYLSGSRFSLFLFLTLARVVPNVWHYPYFVGAKSTNFLMIKLQPKIYDHIMLTVC 61
           K+NLFLYLSGSRFSLFLFLTL RVVPNVWH+PYFVGA STN LMIKLQPKIYDHIMLTV 
Sbjct: 241 KYNLFLYLSGSRFSLFLFLTLPRVVPNVWHFPYFVGATSTNSLMIKLQPKIYDHIMLTVR 300

Query: 62  ISFILQVCS 71
           ISFIL VCS
Sbjct: 301 ISFILSVCS 309

[Close]
BLAST of Cmc02g0048591 vs. NCBI nr
Match: AEN56110.1 (transport membrane protein [Cucumis melo subsp. melo] >AZP40289.1 transport membrane protein [Cucumis melo var. momordica])

HSP 1 Score: 124.4 bits (311), Expect = 3.9e-25
Identity = 62/69 (89.86%), Postives = 64/69 (92.75%), Query Frame = 0 

Query: 2   KHNLFLYLSGSRFSLFLFLTLARVVPNVWHYPYFVGAKSTNFLMIKLQPKIYDHIMLTVC 61
           K+NLFLYLSGSRFSLFLFLTL RVVPNVWH+PYFVGA STN LMIKLQPKIYDHIMLTV 
Sbjct: 132 KYNLFLYLSGSRFSLFLFLTLPRVVPNVWHFPYFVGATSTNSLMIKLQPKIYDHIMLTVR 191

Query: 62  ISFILQVCS 71
           ISFIL VCS
Sbjct: 192 ISFILSVCS 200

[Close]
BLAST of Cmc02g0048591 vs. NCBI nr
Match: YP_004849338.1 (transport membrane protein, partial [Cucumis sativus] >ADZ10765.1 transport membrane protein, partial [Cucumis sativus])

HSP 1 Score: 122.9 bits (307), Expect = 1.1e-24
Identity = 61/69 (88.41%), Postives = 64/69 (92.75%), Query Frame = 0 

Query: 2   KHNLFLYLSGSRFSLFLFLTLARVVPNVWHYPYFVGAKSTNFLMIKLQPKIYDHIMLTVC 61
           K+NLFLYLSGSRFSLFLFL+L RVVPNVWH+PYFVGA STN LMIKLQPKIYDHIMLTV 
Sbjct: 113 KYNLFLYLSGSRFSLFLFLSLPRVVPNVWHFPYFVGATSTNSLMIKLQPKIYDHIMLTVR 172

Query: 62  ISFILQVCS 71
           ISFIL VCS
Sbjct: 173 ISFILSVCS 181

[Close]
BLAST of Cmc02g0048591 vs. NCBI nr
Match: YP_009913637.1 (transport membrane protein [Luffa acutangula] >QLJ93011.1 transport membrane protein [Luffa acutangula])

HSP 1 Score: 122.1 bits (305), Expect = 1.9e-24
Identity = 61/69 (88.41%), Postives = 63/69 (91.30%), Query Frame = 0 

Query: 2   KHNLFLYLSGSRFSLFLFLTLARVVPNVWHYPYFVGAKSTNFLMIKLQPKIYDHIMLTVC 61
           K+N FLYLSGSRFSLFLFLTL RVVPNVWH+PYFVGA STN LMIKLQPKIYDHIMLTV 
Sbjct: 122 KYNRFLYLSGSRFSLFLFLTLPRVVPNVWHFPYFVGATSTNSLMIKLQPKIYDHIMLTVR 181

Query: 62  ISFILQVCS 71
           ISFIL VCS
Sbjct: 182 ISFILSVCS 190

[Close]
BLAST of Cmc02g0048591 vs. NCBI nr
Match: YP_009543635.1 (SecY-independent transporter protein, partial [Eucalyptus grandis] >AYV63011.1 SecY-independent transporter protein, partial [Eucalyptus grandis])

HSP 1 Score: 117.9 bits (294), Expect = 3.6e-23
Identity = 59/69 (85.51%), Postives = 61/69 (88.41%), Query Frame = 0 

Query: 2   KHNLFLYLSGSRFSLFLFLTLARVVPNVWHYPYFVGAKSTNFLMIKLQPKIYDHIMLTVC 61
           K+N F YLSGSRFSLFLFLT  RVVPNVWH+PYFVGA STN LMIKLQPKIYDHIMLTV 
Sbjct: 108 KYNRFFYLSGSRFSLFLFLTPPRVVPNVWHFPYFVGATSTNSLMIKLQPKIYDHIMLTVR 167

Query: 62  ISFILQVCS 71
           ISFIL VCS
Sbjct: 168 ISFILSVCS 176

[Close]
BLAST of Cmc02g0048591 vs. ExPASy Swiss-Prot
Match: P93312 (Uncharacterized tatC-like protein ymf16 OS=Arabidopsis thaliana OX=3702 GN=YMF16 PE=2 SV=2)

HSP 1 Score: 102.1 bits (253), Expect = 2.7e-21
Identity = 53/69 (76.81%), Postives = 57/69 (82.61%), Query Frame = 0 

Query: 2   KHNLFLYLSGSRFSLFLFLTLARVVPNVWHYPYFVGAKSTNFLMIKLQPKIYDHIMLTVC 61
           K+N F YLSG  F LFLFLTL+ VVPNVWH+ YFVGA STN LMIKLQPKIYD+IMLTV 
Sbjct: 110 KYNRFFYLSGFCFFLFLFLTLSWVVPNVWHFLYFVGATSTNSLMIKLQPKIYDYIMLTVR 169

Query: 62  ISFILQVCS 71
           ISFI  VCS
Sbjct: 170 ISFISSVCS 178

[Close]
BLAST of Cmc02g0048591 vs. ExPASy Swiss-Prot
Match: P38459 (Uncharacterized tatC-like protein ymf16 OS=Marchantia polymorpha OX=3197 GN=YMF16 PE=3 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 4.9e-15
Identity = 40/69 (57.97%), Postives = 49/69 (71.01%), Query Frame = 0 

Query: 2   KHNLFLYLSGSRFSLFLFLTLARVVPNVWHYPYFVGAKSTNFLMIKLQPKIYDHIMLTVC 61
           K+N   YLSG  F LF F+T   +VPNVWH+ Y +   STN L+IKLQPKI+D+IMLTV 
Sbjct: 102 KYNKLFYLSGFCFFLFFFVTFVWIVPNVWHFLYKLSTTSTNLLIIKLQPKIFDYIMLTVR 161

Query: 62  ISFILQVCS 71
           I FI  +CS
Sbjct: 162 ILFISSICS 170

[Close]
BLAST of Cmc02g0048591 vs. ExPASy TrEMBL
Match: A0A5A7V1T2 (Transport membrane protein (Mitochondrion) OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold45385G00120 PE=3 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.9e-25
Identity = 62/69 (89.86%), Postives = 64/69 (92.75%), Query Frame = 0 

Query: 2   KHNLFLYLSGSRFSLFLFLTLARVVPNVWHYPYFVGAKSTNFLMIKLQPKIYDHIMLTVC 61
           K+NLFLYLSGSRFSLFLFLTL RVVPNVWH+PYFVGA STN LMIKLQPKIYDHIMLTV 
Sbjct: 241 KYNLFLYLSGSRFSLFLFLTLPRVVPNVWHFPYFVGATSTNSLMIKLQPKIYDHIMLTVR 300

Query: 62  ISFILQVCS 71
           ISFIL VCS
Sbjct: 301 ISFILSVCS 309

[Close]
BLAST of Cmc02g0048591 vs. ExPASy TrEMBL
Match: G3EU26 (Transport membrane protein OS=Cucumis melo subsp. melo OX=412675 GN=mttB PE=3 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.9e-25
Identity = 62/69 (89.86%), Postives = 64/69 (92.75%), Query Frame = 0 

Query: 2   KHNLFLYLSGSRFSLFLFLTLARVVPNVWHYPYFVGAKSTNFLMIKLQPKIYDHIMLTVC 61
           K+NLFLYLSGSRFSLFLFLTL RVVPNVWH+PYFVGA STN LMIKLQPKIYDHIMLTV 
Sbjct: 132 KYNLFLYLSGSRFSLFLFLTLPRVVPNVWHFPYFVGATSTNSLMIKLQPKIYDHIMLTVR 191

Query: 62  ISFILQVCS 71
           ISFIL VCS
Sbjct: 192 ISFILSVCS 200

[Close]
BLAST of Cmc02g0048591 vs. ExPASy TrEMBL
Match: A0A3S9JIG7 (Transport membrane protein OS=Cucumis melo var. momordica OX=2034244 GN=mttB PE=3 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.9e-25
Identity = 62/69 (89.86%), Postives = 64/69 (92.75%), Query Frame = 0 

Query: 2   KHNLFLYLSGSRFSLFLFLTLARVVPNVWHYPYFVGAKSTNFLMIKLQPKIYDHIMLTVC 61
           K+NLFLYLSGSRFSLFLFLTL RVVPNVWH+PYFVGA STN LMIKLQPKIYDHIMLTV 
Sbjct: 132 KYNLFLYLSGSRFSLFLFLTLPRVVPNVWHFPYFVGATSTNSLMIKLQPKIYDHIMLTVR 191

Query: 62  ISFILQVCS 71
           ISFIL VCS
Sbjct: 192 ISFILSVCS 200

[Close]
BLAST of Cmc02g0048591 vs. ExPASy TrEMBL
Match: G3EIZ0 (Transport membrane protein (Fragment) OS=Cucumis sativus OX=3659 GN=mttB PE=3 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 5.4e-25
Identity = 61/69 (88.41%), Postives = 64/69 (92.75%), Query Frame = 0 

Query: 2   KHNLFLYLSGSRFSLFLFLTLARVVPNVWHYPYFVGAKSTNFLMIKLQPKIYDHIMLTVC 61
           K+NLFLYLSGSRFSLFLFL+L RVVPNVWH+PYFVGA STN LMIKLQPKIYDHIMLTV 
Sbjct: 113 KYNLFLYLSGSRFSLFLFLSLPRVVPNVWHFPYFVGATSTNSLMIKLQPKIYDHIMLTVR 172

Query: 62  ISFILQVCS 71
           ISFIL VCS
Sbjct: 173 ISFILSVCS 181

[Close]
BLAST of Cmc02g0048591 vs. ExPASy TrEMBL
Match: A0A7D6C8B1 (Transport membrane protein OS=Luffa acutangula OX=56866 GN=mttB PE=3 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 9.3e-25
Identity = 61/69 (88.41%), Postives = 63/69 (91.30%), Query Frame = 0 

Query: 2   KHNLFLYLSGSRFSLFLFLTLARVVPNVWHYPYFVGAKSTNFLMIKLQPKIYDHIMLTVC 61
           K+N FLYLSGSRFSLFLFLTL RVVPNVWH+PYFVGA STN LMIKLQPKIYDHIMLTV 
Sbjct: 122 KYNRFLYLSGSRFSLFLFLTLPRVVPNVWHFPYFVGATSTNSLMIKLQPKIYDHIMLTVR 181

Query: 62  ISFILQVCS 71
           ISFIL VCS
Sbjct: 182 ISFILSVCS 190

[Close]
BLAST of Cmc02g0048591 vs. TAIR 10
Match: ATMG00570.1 (Sec-independent periplasmic protein translocase )

HSP 1 Score: 112.5 bits (280), Expect = 1.4e-25
Identity = 57/69 (82.61%), Postives = 60/69 (86.96%), Query Frame = 0 

Query: 2   KHNLFLYLSGSRFSLFLFLTLARVVPNVWHYPYFVGAKSTNFLMIKLQPKIYDHIMLTVC 61
           K+N FL+LSGSRF LFLFLT  RVVPNVWH+PYFVGA STN LMIKLQPKIYDHIMLTV 
Sbjct: 116 KYNRFLHLSGSRFFLFLFLTPPRVVPNVWHFPYFVGATSTNSLMIKLQPKIYDHIMLTVR 175

Query: 62  ISFILQVCS 71
           ISFI  VCS
Sbjct: 176 ISFIPSVCS 184

The following BLAST results are available for this feature:
BLAST of Cmc02g0048591 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0059749.13.9e-2589.86transport membrane protein [Cucumis melo var. makuwa][more]
AEN56110.13.9e-2589.86transport membrane protein [Cucumis melo subsp. melo] >AZP40289.1 transport memb... [more]
YP_004849338.11.1e-2488.41transport membrane protein, partial [Cucumis sativus] >ADZ10765.1 transport memb... [more]
YP_009913637.11.9e-2488.41transport membrane protein [Luffa acutangula] >QLJ93011.1 transport membrane pro... [more]
YP_009543635.13.6e-2385.51SecY-independent transporter protein, partial [Eucalyptus grandis] >AYV63011.1 S... [more]
BLAST of Cmc02g0048591 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P933122.7e-2176.81Uncharacterized tatC-like protein ymf16 OS=Arabidopsis thaliana OX=3702 GN=YMF16... [more]
P384594.9e-1557.97Uncharacterized tatC-like protein ymf16 OS=Marchantia polymorpha OX=3197 GN=YMF1... [more]
BLAST of Cmc02g0048591 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7V1T21.9e-2589.86Transport membrane protein (Mitochondrion) OS=Cucumis melo var. makuwa OX=119469... [more]
G3EU261.9e-2589.86Transport membrane protein OS=Cucumis melo subsp. melo OX=412675 GN=mttB PE=3 SV... [more]
A0A3S9JIG71.9e-2589.86Transport membrane protein OS=Cucumis melo var. momordica OX=2034244 GN=mttB PE=... [more]
G3EIZ05.4e-2588.41Transport membrane protein (Fragment) OS=Cucumis sativus OX=3659 GN=mttB PE=3 SV... [more]
A0A7D6C8B19.3e-2588.41Transport membrane protein OS=Luffa acutangula OX=56866 GN=mttB PE=3 SV=1[more]
BLAST of Cmc02g0048591 vs. TAIR 10
Match NameE-valueIdentityDescription
ATMG00570.11.4e-2582.61Sec-independent periplasmic protein translocase [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc02g0048591.1Cmc02g0048591.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane
cellular_component GO:0005739 mitochondrion