Cmc02g0048501 (gene) Melon (Charmono) v1.1

Overview
NameCmc02g0048501
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionDUF4283 domain-containing protein
LocationCMiso1.1chr02: 14001901 .. 14004119 (-)
RNA-Seq ExpressionCmc02g0048501
SyntenyCmc02g0048501
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGCGACTCTTCACCTAAAAAATGATGATTTCAATTAGAAAGCATTTACTCTCAACAACCACTAGTTAACTTCAACTGGAACATTTCATTAACTCTCCTCCATCCAAAAAAAGGTACCTTTCTTATTTTCCTCTCATAGTTTCTTTCATACTTCATCACTCTCCTCTCTGCTTCCCTCTGGTTTTCTTGGCAAAATGGCTTTCATGAACCAACTTCCCCATTTCTGCACTGTTGAGAAAAAAGAATTTGTAATCTCACTTGACAAAAGATCAAAGGATCTTAACATGCTTATTACTTAGGTGGGCCCCTACAAATCTTTTTCCATTGCTATCACTGTGGAATCTCTTGAATGGCTGAACACTCCCCAAACAACCAAATTCTTCCAAGAAAAGAGGTATGTTGATTTCTGTCTATGGGTTCAGAAAACTTATAATAGGAAAGGGTATATTGCGAAGATTTATAAGGTGGACGACAAGGGACGCAGATGTTGTATTTTTGTCCCTGAAGGTATGGAAAAATCTGGCTGGGCCCATTTATCTGATATATGTTTACTTGAAAAAAAGAAATAGAGAGAAGACCTTTCTTGACCATTACCTCAAACAGAGAAAAAAAATCAAAGAACACTAAGCATCATCCTTTGACTAAGACTCCTCTAGAAGGTCATATGCTGAAGTTGTTCTTAGTTTAGCCACATCTGAATCAGATAACCCAAATGCAACCAAATGTGTCCAACAAATAAAGAACACTTCAATTGAAAAGAATGCAGACAAGAAGGAAGTGTTTGATTGGAGCAAGGTGGTTGTCCTAACAACATGAAATTTTCATGATGACTGGGACAAAATCACAGACAAGGTTAAAGAACAGTCTGGATAGACATTTCATTATAGACCCTTCCATGCTGAAAATGCCCTGTTTTTTTTTCAAAGATCCTAGTTTGGCAAAAATGATTTGCAAAAACAGAGGTTGAAATACAGTTGGGACTTTTTATGTAAAGTTTGAAATATGGTTAAAAGAGTTGCACACTAAACCAAAGCTCATCCCAAGCTATGGTAGATGGATCAGAATCAGAGGCATCCCCTTTCATGCCTTGAATATGTTTGCTTTCACTCAGATAGGGGAAGCCCGTGGAGGCTTTATTGAAGCGACTAGAGAAGCTGTTGATAAAATGGAATTGATTAAAGCTTTGATTAATGTCCAAGATAACTATACTGGTTTCATTTCAGCAAACATTAGAATCTTTGATGAAGAAGAATGTGAATACAATGTTCATACGGTCATCAACACAGAGGGCAAGTGGTTAAGGGAAAGAAACCCCAGAATTCACGGTTCATTTACTAGAAAAGCCGCTGAAAACTTCGATGAGTTCAATCTCCAAGCTGAGCAATTCACTTTTAAGGGGAATATAGCTGTAGTTGATAAAAAGCATCGCCGGAAACCTCCAAGAACAGAAAAATGAAGGTGAACTCTCGTAGGAAATTTGAACCCATCAAAATGAATAAAAAAATCAACCTAACAACAAAATTTTTGGATTGGAATTATGATGGGGACAATGATAATAGTAACAAAACTGAGGTTGAGAAAAGTGTTAGTGAAGTAAAAATCAAAAGCATTGAACAGAGCAAAGAAAAGAAAGTTTATCGGGTGAAAAGTGAAAAAGCCAAAAGTGAGAGCACCGGTGATGAAAACTAGAAATCAAAAGAAAAAGAAGATCTTAAAGAGATAAGTCTGGTACTGGTAGATTTTGGTCATTTATCTTCTTTATCAGAAACAAATATCTCTAGCCCAAAAGAATCCATGTACACTCCTTCTCCCCTTTCAGCAACAGAATCTGAGATAGTCAAGGATAGTCTGGGGAATATGGTCATGAGTGACTAAGAAGATTGGGGAACCCTGAACACTGAGAAGCAAGAAGATCAAAACGAAGAAGAAAGGAGCTTAAAAAAAAATTGACAGTGTGGCTCAAAGACAATAGTTTAAAATTGATTGCTGAATTTAATAGTGAATGCTTTGTTGTTGTTAATTTAGTGCAAAATGTAAATTCTATTGTTGATAAAGAAAATGTGAATGATGATGAGAATGAAGGTGAGAACCAGAATATTATTGGGCAGATTGTTTCCTCATGAAGATAATCTCATGGAATGTAAGAGGGCTAAGCTCGCCCAATAAAAGAGCTCAAATAAAATCCCCTATACTTGCCTACGACCTTGACTTTGTGATATT

mRNA sequence

TGCGACTCTTCACCTAAAAAATGATGATTTCAATTAGAAAGCATTTACTCTCAACAACCACTAGTTAACTTCAACTGGAACATTTCATTAACTCTCCTCCATCCAAAAAAAGGTGGGCCCCTACAAATCTTTTTCCATTGCTATCACTGTGGAATCTCTTGAATGGCTGAACACTCCCCAAACAACCAAATTCTTCCAAGAAAAGAGGTATGTTGATTTCTGTCTATGGGTTCAGAAAACTTATAATAGGAAAGGGTATATTGCGAAGATTTATAAGGTGGACGACAAGGGACGCAGATGTTGTATTTTTGTCCCTGAAGGTATGGAAAAATCTGGCTGGGCCCATTTATCTGATATATGTTTACTTGAAAAAAAGAAATAGAGAGAAGACCTTTCTTGACCATTACCTCAAACAGAGAAAAAAAATCAAAGAACACTAAGCATCATCCTTTGACTAAGACTCCTCTAGAAGGTCATATGCTGAAGTTGTTCTTAGTTTAGCCACATCTGAATCAGATAACCCAAATGCAACCAAATGTGTCCAACAAATAAAGAACACTTCAATTGAAAAGAATGCAGACAAGAAGGAAGTGTTTGATTGGAGCAAGGTGGTTGTCCTAACAACATGAAATTTTCATGATGACTGGGACAAAATCACAGACAAGGTTAAAGAACAGTCTGGATAGACATTTCATTATAGACCCTTCCATGCTGAAAATGCCCTGTTTTTTTTTCAAAGATCCTAGTTTGGCAAAAATGATTTGCAAAAACAGAGGTTGAAATACAGTTGGGACTTTTTATGTAAAGTTTGAAATATGGTTAAAAGAGTTGCACACTAAACCAAAGCTCATCCCAAGCTATGGTAGATGGATCAGAATCAGAGGCATCCCCTTTCATGCCTTGAATATGTTTGCTTTCACTCAGATAGGGGAAGCCCGTGGAGGCTTTATTGAAGCGACTAGAGAAGCTGTTGATAAAATGGAATTGATTAAAGCTTTGATTAATGTCCAAGATAACTATACTGGTTTCATTTCAGCAAACATTAGAATCTTTGATGAAGAAGAATGTGAATACAATGTTCATACGGTCATCAACACAGAGGGCAAGTGGTTAAGGGAAAGAAACCCCAGAATTCACGGTTCATTTACTAGAAAAGCCGCTGAAAACTTCGATGAGTTCAATCTCCAAGCTGAGCAATTCACTTTTAAGGGGAATATAGCTGTAGTTGATAAAAAGCATCGCCGGAAACCTCCAAGAACAGAAAAATGAAGGTGAACTCTCGTAGGAAATTTGAACCCATCAAAATGAATAAAAAAATCAACCTAACAACAAAATTTTTGGATTGGAATTATGATGGGGACAATGATAATAGTAACAAAACTGAGGTTGAGAAAAGTGTTAGTGAAGTAAAAATCAAAAGCATTGAACAGAGCAAAGAAAAGAAAGTTTATCGGGTGAAAAGTGAAAAAGCCAAAAGTGAGAGCACCGGTGATGAAAACTAGAAATCAAAAGAAAAAGAAGATCTTAAAGAGATAAGTCTGGTACTGGTAGATTTTGGTCATTTATCTTCTTTATCAGAAACAAATATCTCTAGCCCAAAAGAATCCATGTACACTCCTTCTCCCCTTTCAGCAACAGAATCTGAGATAGTCAAGGATAGTCTGGGGAATATGGTCATGAGTGACTAAGAAGATTGGGGAACCCTGAACACTGAGAAGCAAGAAGATCAAAACGAAGAAGAAAGGAGCTTAAAAAAAAATTGACAGTGTGGCTCAAAGACAATAGTTTAAAATTGATTGCTGAATTTAATAGTGAATGCTTTGTTGTTGTTAATTTAGTGCAAAATGTAAATTCTATTGTTGATAAAGAAAATGTGAATGATGATGAGAATGAAGGTGAGAACCAGAATATTATTGGGCAGATTGTTTCCTCATGAAGATAATCTCATGGAATGTAAGAGGGCTAAGCTCGCCCAATAAAAGAGCTCAAATAAAATCCCCTATACTTGCCTACGACCTTGACTTTGTGATATT

Coding sequence (CDS)

ATGTTTGCTTTCACTCAGATAGGGGAAGCCCGTGGAGGCTTTATTGAAGCGACTAGAGAAGCTGTTGATAAAATGGAATTGATTAAAGCTTTGATTAATGTCCAAGATAACTATACTGGTTTCATTTCAGCAAACATTAGAATCTTTGATGAAGAAGAATGTGAATACAATGTTCATACGGTCATCAACACAGAGGGCAAGTGGTTAAGGGAAAGAAACCCCAGAATTCACGGTTCATTTACTAGAAAAGCCGCTGAAAACTTCGATGAGTTCAATCTCCAAGCTGAGCAATTCACTTTTAAGGGGAATATAGCTGTAGTTGATAAAAAGCATCGCCGGAAACCTCCAAGAACAGAAAAATGA

Protein sequence

MFAFTQIGEARGGFIEATREAVDKMELIKALINVQDNYTGFISANIRIFDEEECEYNVHTVINTEGKWLRERNPRIHGSFTRKAAENFDEFNLQAEQFTFKGNIAVVDKKHRRKPPRTEK
Homology
BLAST of Cmc02g0048501 vs. NCBI nr
Match: TYK10331.1 (hypothetical protein E5676_scaffold367G00030 [Cucumis melo var. makuwa])

HSP 1 Score: 232.6 bits (592), Expect = 1.7e-57
Identity = 113/115 (98.26%), Postives = 115/115 (100.00%), Query Frame = 0

Query: 6   QIGEARGGFIEATREAVDKMELIKALINVQDNYTGFISANIRIFDEEECEYNVHTVINTE 65
           +IGEARGGFIEATREAVDKMELIKALINVQDNYTGFISANIRIFDEEECEYNVHTVINTE
Sbjct: 15  EIGEARGGFIEATREAVDKMELIKALINVQDNYTGFISANIRIFDEEECEYNVHTVINTE 74

Query: 66  GKWLRERNPRIHGSFTRKAAENFDEFNLQAEQFTFKGNIAVVDKKHRRKPPRTEK 121
           GKWLRERNPRIHGSFTRKAAENFDEFNLQAEQFTFKGNIAVVDKKHR+KPPRTEK
Sbjct: 75  GKWLRERNPRIHGSFTRKAAENFDEFNLQAEQFTFKGNIAVVDKKHRQKPPRTEK 129

BLAST of Cmc02g0048501 vs. NCBI nr
Match: KAA0050075.1 (hypothetical protein E6C27_scaffold675G00580 [Cucumis melo var. makuwa])

HSP 1 Score: 228.4 bits (581), Expect = 3.3e-56
Identity = 112/120 (93.33%), Postives = 117/120 (97.50%), Query Frame = 0

Query: 1   MFAFTQIGEARGGFIEATREAVDKMELIKALINVQDNYTGFISANIRIFDEEECEYNVHT 60
           +F +++IGEARGGFIEATREAVDKMELIKALINVQDNYTGFISANIRIFDEEECEY VHT
Sbjct: 155 VFDWSKIGEARGGFIEATREAVDKMELIKALINVQDNYTGFISANIRIFDEEECEYIVHT 214

Query: 61  VINTEGKWLRERNPRIHGSFTRKAAENFDEFNLQAEQFTFKGNIAVVDKKHRRKPPRTEK 120
           VINTEGKWLRERNPRIHGSFTRKAAENFDEFNLQAEQFTFKGNIAVVD+KHR KPPRTEK
Sbjct: 215 VINTEGKWLRERNPRIHGSFTRKAAENFDEFNLQAEQFTFKGNIAVVDEKHRWKPPRTEK 274

BLAST of Cmc02g0048501 vs. NCBI nr
Match: KAA0044449.1 (hypothetical protein E6C27_scaffold46G001820 [Cucumis melo var. makuwa])

HSP 1 Score: 136.3 bits (342), Expect = 1.7e-28
Identity = 65/106 (61.32%), Postives = 85/106 (80.19%), Query Frame = 0

Query: 4   FTQIGEARGGFIEATREAVDKMELIKALINVQDNYTGFISANIRIFDEEECEYNVHTVIN 63
           F QIGEA GGFI+A  E+V+K+EL +ALI V++NYTGF+ A I+I DEE  ++ + TV +
Sbjct: 297 FIQIGEAYGGFIDAAPESVNKLELTEALIKVKENYTGFLPAFIQIHDEEGHDFIIQTVTH 356

Query: 64  TEGKWLRERNPRIHGSFTRKAAENFDEFNLQAEQFTFKGNIAVVDK 110
            +GKWLRERNP IHGSFT+ AAENF+EFN  AEQ+TF+ N+AV+ K
Sbjct: 357 PKGKWLRERNPSIHGSFTKTAAENFNEFNPYAEQYTFRRNLAVIAK 402

BLAST of Cmc02g0048501 vs. NCBI nr
Match: KAA0044557.1 (hypothetical protein E6C27_scaffold46G003060 [Cucumis melo var. makuwa])

HSP 1 Score: 136.3 bits (342), Expect = 1.7e-28
Identity = 66/106 (62.26%), Postives = 84/106 (79.25%), Query Frame = 0

Query: 4   FTQIGEARGGFIEATREAVDKMELIKALINVQDNYTGFISANIRIFDEEECEYNVHTVIN 63
           F QIGEA GGFI+A  E+V+K+EL +ALI V++NYTGF+ A I+I DEE   + + TV +
Sbjct: 299 FIQIGEACGGFIDAAPESVNKIELTEALIKVKENYTGFLPAFIQIHDEEGHVFIIQTVTH 358

Query: 64  TEGKWLRERNPRIHGSFTRKAAENFDEFNLQAEQFTFKGNIAVVDK 110
            EG+WLRERNP IHGSFT+ AAENF+EFN  AEQFTF+ N+AV+ K
Sbjct: 359 PEGRWLRERNPSIHGSFTKTAAENFNEFNPYAEQFTFRRNLAVISK 404

BLAST of Cmc02g0048501 vs. NCBI nr
Match: TYK29576.1 (hypothetical protein E5676_scaffold655G001820 [Cucumis melo var. makuwa])

HSP 1 Score: 136.3 bits (342), Expect = 1.7e-28
Identity = 65/106 (61.32%), Postives = 85/106 (80.19%), Query Frame = 0

Query: 4   FTQIGEARGGFIEATREAVDKMELIKALINVQDNYTGFISANIRIFDEEECEYNVHTVIN 63
           F QIGEA GGFI+A  E+V+K+EL +ALI V++NYTGF+ A I+I DEE  ++ + TV +
Sbjct: 297 FIQIGEAYGGFIDAAPESVNKLELTEALIKVKENYTGFLPAFIQIHDEEGHDFIIQTVTH 356

Query: 64  TEGKWLRERNPRIHGSFTRKAAENFDEFNLQAEQFTFKGNIAVVDK 110
            +GKWLRERNP IHGSFT+ AAENF+EFN  AEQ+TF+ N+AV+ K
Sbjct: 357 PKGKWLRERNPSIHGSFTKTAAENFNEFNPYAEQYTFRRNLAVIAK 402

BLAST of Cmc02g0048501 vs. ExPASy TrEMBL
Match: A0A5D3CEY1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00030 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 8.4e-58
Identity = 113/115 (98.26%), Postives = 115/115 (100.00%), Query Frame = 0

Query: 6   QIGEARGGFIEATREAVDKMELIKALINVQDNYTGFISANIRIFDEEECEYNVHTVINTE 65
           +IGEARGGFIEATREAVDKMELIKALINVQDNYTGFISANIRIFDEEECEYNVHTVINTE
Sbjct: 15  EIGEARGGFIEATREAVDKMELIKALINVQDNYTGFISANIRIFDEEECEYNVHTVINTE 74

Query: 66  GKWLRERNPRIHGSFTRKAAENFDEFNLQAEQFTFKGNIAVVDKKHRRKPPRTEK 121
           GKWLRERNPRIHGSFTRKAAENFDEFNLQAEQFTFKGNIAVVDKKHR+KPPRTEK
Sbjct: 75  GKWLRERNPRIHGSFTRKAAENFDEFNLQAEQFTFKGNIAVVDKKHRQKPPRTEK 129

BLAST of Cmc02g0048501 vs. ExPASy TrEMBL
Match: A0A5A7U8Z5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00580 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 1.6e-56
Identity = 112/120 (93.33%), Postives = 117/120 (97.50%), Query Frame = 0

Query: 1   MFAFTQIGEARGGFIEATREAVDKMELIKALINVQDNYTGFISANIRIFDEEECEYNVHT 60
           +F +++IGEARGGFIEATREAVDKMELIKALINVQDNYTGFISANIRIFDEEECEY VHT
Sbjct: 155 VFDWSKIGEARGGFIEATREAVDKMELIKALINVQDNYTGFISANIRIFDEEECEYIVHT 214

Query: 61  VINTEGKWLRERNPRIHGSFTRKAAENFDEFNLQAEQFTFKGNIAVVDKKHRRKPPRTEK 120
           VINTEGKWLRERNPRIHGSFTRKAAENFDEFNLQAEQFTFKGNIAVVD+KHR KPPRTEK
Sbjct: 215 VINTEGKWLRERNPRIHGSFTRKAAENFDEFNLQAEQFTFKGNIAVVDEKHRWKPPRTEK 274

BLAST of Cmc02g0048501 vs. ExPASy TrEMBL
Match: A0A5D3E0Y8 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001820 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 8.2e-29
Identity = 65/106 (61.32%), Postives = 85/106 (80.19%), Query Frame = 0

Query: 4   FTQIGEARGGFIEATREAVDKMELIKALINVQDNYTGFISANIRIFDEEECEYNVHTVIN 63
           F QIGEA GGFI+A  E+V+K+EL +ALI V++NYTGF+ A I+I DEE  ++ + TV +
Sbjct: 297 FIQIGEAYGGFIDAAPESVNKLELTEALIKVKENYTGFLPAFIQIHDEEGHDFIIQTVTH 356

Query: 64  TEGKWLRERNPRIHGSFTRKAAENFDEFNLQAEQFTFKGNIAVVDK 110
            +GKWLRERNP IHGSFT+ AAENF+EFN  AEQ+TF+ N+AV+ K
Sbjct: 357 PKGKWLRERNPSIHGSFTKTAAENFNEFNPYAEQYTFRRNLAVIAK 402

BLAST of Cmc02g0048501 vs. ExPASy TrEMBL
Match: A0A5A7TTA1 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G001820 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 8.2e-29
Identity = 65/106 (61.32%), Postives = 85/106 (80.19%), Query Frame = 0

Query: 4   FTQIGEARGGFIEATREAVDKMELIKALINVQDNYTGFISANIRIFDEEECEYNVHTVIN 63
           F QIGEA GGFI+A  E+V+K+EL +ALI V++NYTGF+ A I+I DEE  ++ + TV +
Sbjct: 297 FIQIGEAYGGFIDAAPESVNKLELTEALIKVKENYTGFLPAFIQIHDEEGHDFIIQTVTH 356

Query: 64  TEGKWLRERNPRIHGSFTRKAAENFDEFNLQAEQFTFKGNIAVVDK 110
            +GKWLRERNP IHGSFT+ AAENF+EFN  AEQ+TF+ N+AV+ K
Sbjct: 357 PKGKWLRERNPSIHGSFTKTAAENFNEFNPYAEQYTFRRNLAVIAK 402

BLAST of Cmc02g0048501 vs. ExPASy TrEMBL
Match: A0A5A7TRS9 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G003060 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 8.2e-29
Identity = 66/106 (62.26%), Postives = 84/106 (79.25%), Query Frame = 0

Query: 4   FTQIGEARGGFIEATREAVDKMELIKALINVQDNYTGFISANIRIFDEEECEYNVHTVIN 63
           F QIGEA GGFI+A  E+V+K+EL +ALI V++NYTGF+ A I+I DEE   + + TV +
Sbjct: 299 FIQIGEACGGFIDAAPESVNKIELTEALIKVKENYTGFLPAFIQIHDEEGHVFIIQTVTH 358

Query: 64  TEGKWLRERNPRIHGSFTRKAAENFDEFNLQAEQFTFKGNIAVVDK 110
            EG+WLRERNP IHGSFT+ AAENF+EFN  AEQFTF+ N+AV+ K
Sbjct: 359 PEGRWLRERNPSIHGSFTKTAAENFNEFNPYAEQFTFRRNLAVISK 404

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TYK10331.11.7e-5798.26hypothetical protein E5676_scaffold367G00030 [Cucumis melo var. makuwa][more]
KAA0050075.13.3e-5693.33hypothetical protein E6C27_scaffold675G00580 [Cucumis melo var. makuwa][more]
KAA0044449.11.7e-2861.32hypothetical protein E6C27_scaffold46G001820 [Cucumis melo var. makuwa][more]
KAA0044557.11.7e-2862.26hypothetical protein E6C27_scaffold46G003060 [Cucumis melo var. makuwa][more]
TYK29576.11.7e-2861.32hypothetical protein E5676_scaffold655G001820 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3CEY18.4e-5898.26Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7U8Z51.6e-5693.33Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3E0Y88.2e-2961.32DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5A7TTA18.2e-2961.32DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5A7TRS98.2e-2962.26DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc02g0048501.1Cmc02g0048501.1mRNA