Cmc02g0047021 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc02g0047021
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr02: 12694622 .. 12696211 (+)
RNA-Seq Expression	Cmc02g0047021
Synteny	Cmc02g0047021

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCCCGCAGAGCTGAAAGAACTGAAGGTTCAGTTACAAGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTATTTGTTAAGAAGAATGATGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTTAAGAACAGATATCCCCTGCCCAGGATCGACGATCTATTTGACCAGTTACAGGGAGCTACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATATCATCAACTGAGGATTAAGGATGGTGATGTACCGAAGACAGCATTTCATTCTAGATATGGACACTATGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATTGATGATATCTTGATATACTCCAAGACGGAGGCCGAACATGCGGAGCATTTACGGATAGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTAGGCCATGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGAACCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGATTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACTAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCTAGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAACAAGGTAAGGTGGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTACTTATATGGTGAAAAGATACAGATCTTCACGGATCATAAGATCTTGAAATACTTCTTTACTCAGAAGGAATTGAATATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGATAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCAAGATCTTGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTCACTATACAGTTAGCCCAGTTGACGGTACAGCCGTCTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATTTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCGGTTGAGTTCTCCATATCCTCTGATGGTGGACTGTTGTTTGAGAGACGCCTTCGTGTGCCATCAGATAGTACGGTTAAAACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGA

mRNA sequence

ATGGCCCCCGCAGAGCTGAAAGAACTGAAGGTTCAGTTACAAGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTATTTGTTAAGAAGAATGATGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTTAAGAACAGATATCCCCTGCCCAGGATCGACGATCTATTTGACCAGTTACAGGGAGCTACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATATCATCAACTGAGGATTAAGGATGGTGATGTACCGAAGACAGCATTTCATTCTAGATATGGACACTATGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATTGATGATATCTTGATATACTCCAAGACGGAGGCCGAACATGCGGAGCATTTACGGATAGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTAGGCCATGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGAACCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGATTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACTAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCTAGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAACAAGGTAAGGTGGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTACTTATATGGTGAAAAGATACAGATCTTCACGGATCATAAGATCTTGAAATACTTCTTTACTCAGAAGGAATTGAATATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGATAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCAAGATCTTGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTCACTATACAGTTAGCCCAGTTGACGGTACAGCCGTCTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATTTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCGGTTGAGTTCTCCATATCCTCTGATGGTGGACTGTTGTTTGAGAGACGCCTTCGTGTGCCATCAGATAGTACGGTTAAAACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGA

Coding sequence (CDS)

ATGGCCCCCGCAGAGCTGAAAGAACTGAAGGTTCAGTTACAAGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTATTTGTTAAGAAGAATGATGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTTAAGAACAGATATCCCCTGCCCAGGATCGACGATCTATTTGACCAGTTACAGGGAGCTACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATATCATCAACTGAGGATTAAGGATGGTGATGTACCGAAGACAGCATTTCATTCTAGATATGGACACTATGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATTGATGATATCTTGATATACTCCAAGACGGAGGCCGAACATGCGGAGCATTTACGGATAGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTAGGCCATGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGAACCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGATTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACTAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCTAGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAACAAGGTAAGGTGGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTACTTATATGGTGAAAAGATACAGATCTTCACGGATCATAAGATCTTGAAATACTTCTTTACTCAGAAGGAATTGAATATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGATAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCAAGATCTTGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTCACTATACAGTTAGCCCAGTTGACGGTACAGCCGTCTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATTTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCGGTTGAGTTCTCCATATCCTCTGATGGTGGACTGTTGTTTGAGAGACGCCTTCGTGTGCCATCAGATAGTACGGTTAAAACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGA

Protein sequence

MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKNDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHAEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWNRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSSSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKILKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKINVVADALSRKVSHSAALITRQAPLHQDLERAEIAVSVGAVTIQLAQLTVQPSLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLRVPSDSTVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYW

Homology

[Close]

BLAST of Cmc02g0047021 vs. NCBI nr
Match: KAA0035137.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 1029.2 bits (2660), Expect = 1.2e-296
Identity = 515/516 (99.81%), Postives = 516/516 (100.00%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKNDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKNDGSMRLCIDYRELNKVTVKNR
Sbjct: 742  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKNDGSMRLCIDYRELNKVTVKNR 801

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFHSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFHSRYGHYEFIVMSFGLT
Sbjct: 802  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFHSRYGHYEFIVMSFGLT 861

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHAEHLRIVLQTLRDNKLYAKFS 180
            NAPAVF+DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHAEHLRIVLQTLRDNKLYAKFS
Sbjct: 862  NAPAVFIDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHAEHLRIVLQTLRDNKLYAKFS 921

Query: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWNRPSTVSEVRSFLGLAGYYRRFVENF 240
            KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWNRPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 922  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWNRPSTVSEVRSFLGLAGYYRRFVENF 981

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSSSFVIYSDASKKGL 300
            SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSSSFVIYSDASKKGL
Sbjct: 982  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSSSFVIYSDASKKGL 1041

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKIL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKIL
Sbjct: 1042 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKIL 1101

Query: 361  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKINVVADALSRKVSHSAALITRQAPLHQ 420
            KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKINVVADALSRKVSHSAALITRQAPLHQ
Sbjct: 1102 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKINVVADALSRKVSHSAALITRQAPLHQ 1161

Query: 421  DLERAEIAVSVGAVTIQLAQLTVQPSLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISS 480
            DLERAEIAVSVGAVTIQLAQLTVQPSLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISS
Sbjct: 1162 DLERAEIAVSVGAVTIQLAQLTVQPSLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISS 1221

Query: 481  DGGLLFERRLRVPSDSTVKTELLSEAHSSPFSMHPG 517
            DGGLLFERRLRVPSDSTVKTELLSEAHSSPFSMHPG
Sbjct: 1222 DGGLLFERRLRVPSDSTVKTELLSEAHSSPFSMHPG 1257

[Close]

BLAST of Cmc02g0047021 vs. NCBI nr
Match: KAA0048687.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1027.3 bits (2655), Expect = 4.6e-296
Identity = 512/529 (96.79%), Postives = 519/529 (98.11%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKNDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKK DGSMRLCIDYRELNKVTVKNR
Sbjct: 580  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 639

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFHSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAF SRYGHYEFIVMSFGLT
Sbjct: 640  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 699

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHAEHLRIVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEH EHLR+VLQTLRDNKLYAKFS
Sbjct: 700  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 759

Query: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWNRPSTVSEVRSFLGLAGYYRRFVENF 240
            KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW RPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 760  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 819

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSSSFVIYSDASKKGL 300
            SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGS SFVIYSDASKKGL
Sbjct: 820  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 879

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKIL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHK L
Sbjct: 880  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 939

Query: 361  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKINVVADALSRKVSHSAALITRQAPLHQ 420
            KYFFTQKELNMRQRRWLELVKDYDCEILYHPGK NVVADALSRKVSHSAALITRQAPLH+
Sbjct: 940  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 999

Query: 421  DLERAEIAVSVGAVTIQLAQLTVQPSLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISS 480
            DLERAEIAVSVGAVT+QLAQLTVQP+LRQRIIDAQSNDPYLVEKRGLAEAGQAVEFS+SS
Sbjct: 1000 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSS 1059

Query: 481  DGGLLFERRLRVPSDSTVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYW 530
            DGGLLFERRL VPSDS VKTELLSEAHSSPFSMHPGSTKMY+D+KRVYW
Sbjct: 1060 DGGLLFERRLCVPSDSVVKTELLSEAHSSPFSMHPGSTKMYRDVKRVYW 1108

[Close]

BLAST of Cmc02g0047021 vs. NCBI nr
Match: KAA0040689.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1025.4 bits (2650), Expect = 1.7e-295
Identity = 511/529 (96.60%), Postives = 517/529 (97.73%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKNDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPS+SPWGAPVLFVKK DGSMRLCIDYRELNKVTVKNR
Sbjct: 738  MAPAELKELKVQLQELLDKGFIRPSMSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 797

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFHSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAF SRYGHYEFIVMSFGLT
Sbjct: 798  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 857

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHAEHLRIVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEH EHLR+VLQTLRDNKLYAKFS
Sbjct: 858  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 917

Query: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWNRPSTVSEVRSFLGLAGYYRRFVENF 240
            KCEFWLKQVSFLGHVVSKAGVSVDP KIEAVTGW RPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 918  KCEFWLKQVSFLGHVVSKAGVSVDPVKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 977

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSSSFVIYSDASKKGL 300
            SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVL VPDGS SFVIYSDASKKGL
Sbjct: 978  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLIVPDGSGSFVIYSDASKKGL 1037

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKIL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHK L
Sbjct: 1038 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 1097

Query: 361  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKINVVADALSRKVSHSAALITRQAPLHQ 420
            KYFFTQKELNMRQRRWLELVKDYDCEILYHPGK NVVADALSRKVSHSAALITRQAPLH+
Sbjct: 1098 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 1157

Query: 421  DLERAEIAVSVGAVTIQLAQLTVQPSLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISS 480
            DLERAEIAVSVGAVT+QLAQLTVQP+LRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISS
Sbjct: 1158 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISS 1217

Query: 481  DGGLLFERRLRVPSDSTVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYW 530
            DGGLLFERRL VPSDS +KTELLSEAHSSPFSMHPGSTKMYQDLKRVYW
Sbjct: 1218 DGGLLFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYW 1266

[Close]

BLAST of Cmc02g0047021 vs. NCBI nr
Match: TYK01613.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1024.6 bits (2648), Expect = 3.0e-295
Identity = 511/529 (96.60%), Postives = 516/529 (97.54%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKNDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKK DGSMRLCIDYRELNKVTVKNR
Sbjct: 834  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 893

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFHSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAF SRYGHYEFIVMSFGLT
Sbjct: 894  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 953

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHAEHLRIVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEH EHLR+VLQTLRDNKLYAKFS
Sbjct: 954  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 1013

Query: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWNRPSTVSEVRSFLGLAGYYRRFVENF 240
            KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW RPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 1014 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 1073

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSSSFVIYSDASKKGL 300
            SRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGS SFVIYSDASKKGL
Sbjct: 1074 SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 1133

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKIL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHK L
Sbjct: 1134 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 1193

Query: 361  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKINVVADALSRKVSHSAALITRQAPLHQ 420
            KYFFTQKELNMRQRRWLELVKDYDCEILYHPGK NVVADALSRKVSHSAALITRQAPLH+
Sbjct: 1194 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 1253

Query: 421  DLERAEIAVSVGAVTIQLAQLTVQPSLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISS 480
            DLERAEIAVSVGAVT+QLAQLTVQP+LRQRIIDAQSNDPYLVEKRGLAEAGQ  EFS+SS
Sbjct: 1254 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSS 1313

Query: 481  DGGLLFERRLRVPSDSTVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYW 530
            DGGLLFERRL VPSDS VKTELLSEAHSSPFSMHPGSTKMYQDLKRVYW
Sbjct: 1314 DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYW 1362

[Close]

BLAST of Cmc02g0047021 vs. NCBI nr
Match: KAA0037244.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 1024.2 bits (2647), Expect = 3.9e-295
Identity = 510/529 (96.41%), Postives = 516/529 (97.54%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKNDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKK DGSMRLCIDYRELNKVTVKNR
Sbjct: 614  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 673

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFHSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAF SRYGHYEFIVMSFGLT
Sbjct: 674  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 733

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHAEHLRIVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTE EH EHLR+VLQTLRDNKLYAKF 
Sbjct: 734  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLQTLRDNKLYAKFL 793

Query: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWNRPSTVSEVRSFLGLAGYYRRFVENF 240
            KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW RPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 794  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 853

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSSSFVIYSDASKKGL 300
            SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGS SFVIYSDASKKGL
Sbjct: 854  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 913

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKIL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHK L
Sbjct: 914  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 973

Query: 361  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKINVVADALSRKVSHSAALITRQAPLHQ 420
            KYFFTQKELNMRQRRWLELVKDYDCEILYHPGK NVVADALSRKVSHSAALITRQAPLH+
Sbjct: 974  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 1033

Query: 421  DLERAEIAVSVGAVTIQLAQLTVQPSLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISS 480
            DLERAEIAVSVGAVT+QLAQLTVQP+LRQRIIDAQSNDPYLVEKRGLAE GQAVEFS+SS
Sbjct: 1034 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEVGQAVEFSLSS 1093

Query: 481  DGGLLFERRLRVPSDSTVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYW 530
            DGGLLFERRL VPSDS +KTELLSEAHSSPFSMHPGSTKMYQDLKRVYW
Sbjct: 1094 DGGLLFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYW 1142

[Close]

BLAST of Cmc02g0047021 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 5.1e-88
Identity = 164/403 (40.69%), Postives = 251/403 (62.28%), Query Frame = 0


Query: 7   KELKVQLQELLDKGFIRPSVSPWGAPVLFV-KKNDGS----MRLCIDYRELNKVTVKNRY 66
           +E++ Q+Q++L++G IR S SP+ +P+  V KK D S     R+ IDYR+LN++TV +R+
Sbjct: 221 QEVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRH 280

Query: 67  PLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFHSRYGHYEFIVMSFGLTN 126
           P+P +D++  +L     F+ IDL  G+HQ+ +    V KTAF +++GHYE++ M FGL N
Sbjct: 281 PIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKN 340

Query: 127 APAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHAEHLRIVLQTLRDNKLYAKFSK 186
           APA F   MN + R  L+   +V++DDI+++S +  EH + L +V + L    L  +  K
Sbjct: 341 APATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLDK 400

Query: 187 CEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWNRPSTVSEVRSFLGLAGYYRRFVENFS 246
           CEF  ++ +FLGHV++  G+  +P KIEA+  +  P+   E+++FLGL GYYR+F+ NF+
Sbjct: 401 CEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPNFA 460

Query: 247 RIATPLTQLTRKGAPFVWSKACEDS-FQNLKQKLVTAPVLTVPDGSSSFVIYSDASKKGL 306
            IA P+T+  +K      +    DS F+ LK  +   P+L VPD +  F + +DAS   L
Sbjct: 461 DIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLTTDASDVAL 520

Query: 307 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKIL 366
           G VL Q G  ++Y SR L  HE NY T + EL A+V+A K +RHYL G   +I +DH+ L
Sbjct: 521 GAVLSQDGHPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGRHFEISSDHQPL 580

Query: 367 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKINVVADALSR 404
            + +  K+ N +  RW   + ++D +I Y  GK N VADALSR
Sbjct: 581 SWLYRMKDPNSKLTRWRVKLSEFDFDIKYIKGKENCVADALSR 623

[Close]

BLAST of Cmc02g0047021 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 7.3e-87
Identity = 161/402 (40.05%), Postives = 246/402 (61.19%), Query Frame = 0


Query: 8   ELKVQLQELLDKGFIRPSVSPWGAPVLFV-KKNDGS----MRLCIDYRELNKVTVKNRYP 67
           E++ Q+QE+L++G IR S SP+ +P   V KK D S     R+ IDYR+LN++T+ +RYP
Sbjct: 221 EVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVVIDYRKLNEITIPDRYP 280

Query: 68  LPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFHSRYGHYEFIVMSFGLTNA 127
           +P +D++  +L     F+ IDL  G+HQ+ + +  + KTAF ++ GHYE++ M FGL NA
Sbjct: 281 IPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKSGHYEYLRMPFGLRNA 340

Query: 128 PAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHAEHLRIVLQTLRDNKLYAKFSKC 187
           PA F   MN + R  L+   +V++DDI+I+S +  EH   +++V   L D  L  +  KC
Sbjct: 341 PATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKLADANLKLQLDKC 400

Query: 188 EFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWNRPSTVSEVRSFLGLAGYYRRFVENFSR 247
           EF  K+ +FLGH+V+  G+  +P K++A+  +  P+   E+R+FLGL GYYR+F+ N++ 
Sbjct: 401 EFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFLGLTGYYRKFIPNYAD 460

Query: 248 IATPLTQLTRKGAPFVWSK-ACEDSFQNLKQKLVTAPVLTVPDGSSSFVIYSDASKKGLG 307
           IA P+T   +K       K    ++F+ LK  ++  P+L +PD    FV+ +DAS   LG
Sbjct: 461 IAKPMTSCLKKRTKIDTQKLEYIEAFEKLKALIIRDPILQLPDFEKKFVLTTDASNLALG 520

Query: 308 CVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKILK 367
            VL Q G  +++ SR L  HE NY   + EL A+V+A K +RHYL G +  I +DH+ L+
Sbjct: 521 AVLSQNGHPISFISRTLNDHELNYSAIEKELLAIVWATKTFRHYLLGRQFLIASDHQPLR 580

Query: 368 YFFTQKELNMRQRRWLELVKDYDCEILYHPGKINVVADALSR 404
           +    KE   +  RW   + +Y  +I Y  GK N VADALSR
Sbjct: 581 WLHNLKEPGAKLERWRVRLSEYQFKIDYIKGKENSVADALSR 622

[Close]

BLAST of Cmc02g0047021 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 2.9e-83
Identity = 174/527 (33.02%), Postives = 288/527 (54.65%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKNDGSMRLCIDYRELNKVTVKNR 60
           + P +++ +  ++ + L  G IR S +    PV+FV K +G++R+ +DY+ LNK    N 
Sbjct: 420 LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFHSRYGHYEFIVMSFGLT 120
           YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K AF    G +E++VM +G++
Sbjct: 480 YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHAEHLRIVLQTLRDNKLYAKFS 180
            APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +
Sbjct: 540 TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWNRPSTVSEVRSFLGLAGYYRRFVENF 240
           KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+   
Sbjct: 600 KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSSSFVIYSDASKKGL 300
           S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Sbjct: 660 SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301 GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQI 360
           G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I
Sbjct: 720 GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

Query: 361 FTDHKILKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKINVVADALSRKVSHSAAL 420
            TDH+ L    T +    N R  RW   ++D++ EI Y PG  N +ADALSR       +
Sbjct: 780 LTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------I 839

Query: 421 ITRQAPLHQDLERAEIAVSVGAVTIQLAQLTVQPSLRQRIIDAQSNDPYLVEKRGLAEAG 480
           +    P+ +D E   I          + Q+++    + +++   +ND  L+    L    
Sbjct: 840 VDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNED 899

Query: 481 QAVEFSISSDGGLLFERR--LRVPSDSTVKTELLSEAHSSPFSMHPG 517
           + VE +I    GLL   +  + +P+D+ +   ++ + H     +HPG
Sbjct: 900 KRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPG 929

[Close]

BLAST of Cmc02g0047021 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 2.9e-83
Identity = 174/527 (33.02%), Postives = 288/527 (54.65%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKNDGSMRLCIDYRELNKVTVKNR 60
           + P +++ +  ++ + L  G IR S +    PV+FV K +G++R+ +DY+ LNK    N 
Sbjct: 420 LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFHSRYGHYEFIVMSFGLT 120
           YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K AF    G +E++VM +G++
Sbjct: 480 YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHAEHLRIVLQTLRDNKLYAKFS 180
            APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +
Sbjct: 540 TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWNRPSTVSEVRSFLGLAGYYRRFVENF 240
           KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+   
Sbjct: 600 KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSSSFVIYSDASKKGL 300
           S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Sbjct: 660 SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301 GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQI 360
           G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I
Sbjct: 720 GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

Query: 361 FTDHKILKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKINVVADALSRKVSHSAAL 420
            TDH+ L    T +    N R  RW   ++D++ EI Y PG  N +ADALSR       +
Sbjct: 780 LTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------I 839

Query: 421 ITRQAPLHQDLERAEIAVSVGAVTIQLAQLTVQPSLRQRIIDAQSNDPYLVEKRGLAEAG 480
           +    P+ +D E   I          + Q+++    + +++   +ND  L+    L    
Sbjct: 840 VDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNED 899

Query: 481 QAVEFSISSDGGLLFERR--LRVPSDSTVKTELLSEAHSSPFSMHPG 517
           + VE +I    GLL   +  + +P+D+ +   ++ + H     +HPG
Sbjct: 900 KRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPG 929

[Close]

BLAST of Cmc02g0047021 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 2.9e-83
Identity = 174/527 (33.02%), Postives = 288/527 (54.65%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKNDGSMRLCIDYRELNKVTVKNR 60
           + P +++ +  ++ + L  G IR S +    PV+FV K +G++R+ +DY+ LNK    N 
Sbjct: 420 LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFHSRYGHYEFIVMSFGLT 120
           YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K AF    G +E++VM +G++
Sbjct: 480 YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHAEHLRIVLQTLRDNKLYAKFS 180
            APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +
Sbjct: 540 TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWNRPSTVSEVRSFLGLAGYYRRFVENF 240
           KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+   
Sbjct: 600 KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSSSFVIYSDASKKGL 300
           S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +
Sbjct: 660 SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301 GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQI 360
           G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I
Sbjct: 720 GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

Query: 361 FTDHKILKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKINVVADALSRKVSHSAAL 420
            TDH+ L    T +    N R  RW   ++D++ EI Y PG  N +ADALSR       +
Sbjct: 780 LTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------I 839

Query: 421 ITRQAPLHQDLERAEIAVSVGAVTIQLAQLTVQPSLRQRIIDAQSNDPYLVEKRGLAEAG 480
           +    P+ +D E   I          + Q+++    + +++   +ND  L+    L    
Sbjct: 840 VDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNED 899

Query: 481 QAVEFSISSDGGLLFERR--LRVPSDSTVKTELLSEAHSSPFSMHPG 517
           + VE +I    GLL   +  + +P+D+ +   ++ + H     +HPG
Sbjct: 900 KRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPG 929

[Close]

BLAST of Cmc02g0047021 vs. ExPASy TrEMBL
Match: A0A5A7T0M7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G002220 PE=4 SV=1)

HSP 1 Score: 1029.2 bits (2660), Expect = 5.9e-297
Identity = 515/516 (99.81%), Postives = 516/516 (100.00%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKNDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKNDGSMRLCIDYRELNKVTVKNR
Sbjct: 742  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKNDGSMRLCIDYRELNKVTVKNR 801

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFHSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFHSRYGHYEFIVMSFGLT
Sbjct: 802  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFHSRYGHYEFIVMSFGLT 861

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHAEHLRIVLQTLRDNKLYAKFS 180
            NAPAVF+DLMNRVFREFLDTFVIVFIDDILIYSKTEAEHAEHLRIVLQTLRDNKLYAKFS
Sbjct: 862  NAPAVFIDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHAEHLRIVLQTLRDNKLYAKFS 921

Query: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWNRPSTVSEVRSFLGLAGYYRRFVENF 240
            KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWNRPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 922  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWNRPSTVSEVRSFLGLAGYYRRFVENF 981

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSSSFVIYSDASKKGL 300
            SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSSSFVIYSDASKKGL
Sbjct: 982  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSSSFVIYSDASKKGL 1041

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKIL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKIL
Sbjct: 1042 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKIL 1101

Query: 361  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKINVVADALSRKVSHSAALITRQAPLHQ 420
            KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKINVVADALSRKVSHSAALITRQAPLHQ
Sbjct: 1102 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKINVVADALSRKVSHSAALITRQAPLHQ 1161

Query: 421  DLERAEIAVSVGAVTIQLAQLTVQPSLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISS 480
            DLERAEIAVSVGAVTIQLAQLTVQPSLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISS
Sbjct: 1162 DLERAEIAVSVGAVTIQLAQLTVQPSLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISS 1221

Query: 481  DGGLLFERRLRVPSDSTVKTELLSEAHSSPFSMHPG 517
            DGGLLFERRLRVPSDSTVKTELLSEAHSSPFSMHPG
Sbjct: 1222 DGGLLFERRLRVPSDSTVKTELLSEAHSSPFSMHPG 1257

[Close]

BLAST of Cmc02g0047021 vs. ExPASy TrEMBL
Match: A0A5A7U330 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00040 PE=4 SV=1)

HSP 1 Score: 1027.3 bits (2655), Expect = 2.2e-296
Identity = 512/529 (96.79%), Postives = 519/529 (98.11%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKNDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKK DGSMRLCIDYRELNKVTVKNR
Sbjct: 580  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 639

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFHSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAF SRYGHYEFIVMSFGLT
Sbjct: 640  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 699

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHAEHLRIVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEH EHLR+VLQTLRDNKLYAKFS
Sbjct: 700  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 759

Query: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWNRPSTVSEVRSFLGLAGYYRRFVENF 240
            KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW RPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 760  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 819

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSSSFVIYSDASKKGL 300
            SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGS SFVIYSDASKKGL
Sbjct: 820  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 879

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKIL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHK L
Sbjct: 880  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 939

Query: 361  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKINVVADALSRKVSHSAALITRQAPLHQ 420
            KYFFTQKELNMRQRRWLELVKDYDCEILYHPGK NVVADALSRKVSHSAALITRQAPLH+
Sbjct: 940  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 999

Query: 421  DLERAEIAVSVGAVTIQLAQLTVQPSLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISS 480
            DLERAEIAVSVGAVT+QLAQLTVQP+LRQRIIDAQSNDPYLVEKRGLAEAGQAVEFS+SS
Sbjct: 1000 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSS 1059

Query: 481  DGGLLFERRLRVPSDSTVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYW 530
            DGGLLFERRL VPSDS VKTELLSEAHSSPFSMHPGSTKMY+D+KRVYW
Sbjct: 1060 DGGLLFERRLCVPSDSVVKTELLSEAHSSPFSMHPGSTKMYRDVKRVYW 1108

[Close]

BLAST of Cmc02g0047021 vs. ExPASy TrEMBL
Match: A0A5A7THE6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold529G00030 PE=4 SV=1)

HSP 1 Score: 1025.4 bits (2650), Expect = 8.5e-296
Identity = 511/529 (96.60%), Postives = 517/529 (97.73%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKNDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPS+SPWGAPVLFVKK DGSMRLCIDYRELNKVTVKNR
Sbjct: 738  MAPAELKELKVQLQELLDKGFIRPSMSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 797

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFHSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAF SRYGHYEFIVMSFGLT
Sbjct: 798  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 857

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHAEHLRIVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEH EHLR+VLQTLRDNKLYAKFS
Sbjct: 858  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 917

Query: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWNRPSTVSEVRSFLGLAGYYRRFVENF 240
            KCEFWLKQVSFLGHVVSKAGVSVDP KIEAVTGW RPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 918  KCEFWLKQVSFLGHVVSKAGVSVDPVKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 977

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSSSFVIYSDASKKGL 300
            SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVL VPDGS SFVIYSDASKKGL
Sbjct: 978  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLIVPDGSGSFVIYSDASKKGL 1037

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKIL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHK L
Sbjct: 1038 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 1097

Query: 361  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKINVVADALSRKVSHSAALITRQAPLHQ 420
            KYFFTQKELNMRQRRWLELVKDYDCEILYHPGK NVVADALSRKVSHSAALITRQAPLH+
Sbjct: 1098 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 1157

Query: 421  DLERAEIAVSVGAVTIQLAQLTVQPSLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISS 480
            DLERAEIAVSVGAVT+QLAQLTVQP+LRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISS
Sbjct: 1158 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISS 1217

Query: 481  DGGLLFERRLRVPSDSTVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYW 530
            DGGLLFERRL VPSDS +KTELLSEAHSSPFSMHPGSTKMYQDLKRVYW
Sbjct: 1218 DGGLLFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYW 1266

[Close]

BLAST of Cmc02g0047021 vs. ExPASy TrEMBL
Match: A0A5D3BPI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G002120 PE=4 SV=1)

HSP 1 Score: 1024.6 bits (2648), Expect = 1.4e-295
Identity = 511/529 (96.60%), Postives = 516/529 (97.54%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKNDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKK DGSMRLCIDYRELNKVTVKNR
Sbjct: 834  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 893

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFHSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAF SRYGHYEFIVMSFGLT
Sbjct: 894  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 953

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHAEHLRIVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEH EHLR+VLQTLRDNKLYAKFS
Sbjct: 954  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 1013

Query: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWNRPSTVSEVRSFLGLAGYYRRFVENF 240
            KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW RPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 1014 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 1073

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSSSFVIYSDASKKGL 300
            SRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGS SFVIYSDASKKGL
Sbjct: 1074 SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 1133

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKIL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHK L
Sbjct: 1134 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 1193

Query: 361  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKINVVADALSRKVSHSAALITRQAPLHQ 420
            KYFFTQKELNMRQRRWLELVKDYDCEILYHPGK NVVADALSRKVSHSAALITRQAPLH+
Sbjct: 1194 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 1253

Query: 421  DLERAEIAVSVGAVTIQLAQLTVQPSLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISS 480
            DLERAEIAVSVGAVT+QLAQLTVQP+LRQRIIDAQSNDPYLVEKRGLAEAGQ  EFS+SS
Sbjct: 1254 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSS 1313

Query: 481  DGGLLFERRLRVPSDSTVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYW 530
            DGGLLFERRL VPSDS VKTELLSEAHSSPFSMHPGSTKMYQDLKRVYW
Sbjct: 1314 DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYW 1362

[Close]

BLAST of Cmc02g0047021 vs. ExPASy TrEMBL
Match: A0A5A7T190 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold379G001700 PE=4 SV=1)

HSP 1 Score: 1024.2 bits (2647), Expect = 1.9e-295
Identity = 510/529 (96.41%), Postives = 516/529 (97.54%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKNDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKK DGSMRLCIDYRELNKVTVKNR
Sbjct: 614  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 673

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFHSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAF SRYGHYEFIVMSFGLT
Sbjct: 674  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 733

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHAEHLRIVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTE EH EHLR+VLQTLRDNKLYAKF 
Sbjct: 734  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLQTLRDNKLYAKFL 793

Query: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWNRPSTVSEVRSFLGLAGYYRRFVENF 240
            KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW RPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 794  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 853

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSSSFVIYSDASKKGL 300
            SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGS SFVIYSDASKKGL
Sbjct: 854  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 913

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKIL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHK L
Sbjct: 914  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 973

Query: 361  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKINVVADALSRKVSHSAALITRQAPLHQ 420
            KYFFTQKELNMRQRRWLELVKDYDCEILYHPGK NVVADALSRKVSHSAALITRQAPLH+
Sbjct: 974  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 1033

Query: 421  DLERAEIAVSVGAVTIQLAQLTVQPSLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISS 480
            DLERAEIAVSVGAVT+QLAQLTVQP+LRQRIIDAQSNDPYLVEKRGLAE GQAVEFS+SS
Sbjct: 1034 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEVGQAVEFSLSS 1093

Query: 481  DGGLLFERRLRVPSDSTVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYW 530
            DGGLLFERRL VPSDS +KTELLSEAHSSPFSMHPGSTKMYQDLKRVYW
Sbjct: 1094 DGGLLFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYW 1142

[Close]

BLAST of Cmc02g0047021 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 121.3 bits (303), Expect = 2.3e-27
Identity = 59/131 (45.04%), Postives = 83/131 (63.36%), Query Frame = 0


Query: 162 HLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTGWNRPST 221
           HL +VLQ    ++ YA   KC F   Q+++LG  H++S  GVS DPAK+EA+ GW  P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 222 VSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPV 281
            +E+R FLGL GYYRRFV+N+ +I  PLT+L +K +   W++    +F+ LK  + T PV
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS-LKWTEMAALAFKALKGAVTTLPV 122

Query: 282 LTVPDGSSSFV 291
           L +PD    FV
Sbjct: 123 LALPDLKLPFV 132

The following BLAST results are available for this feature:

BLAST of Cmc02g0047021 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0035137.1	1.2e-296	99.81	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0048687.1	4.6e-296	96.79	pol protein [Cucumis melo var. makuwa]	[more]
KAA0040689.1	1.7e-295	96.60	pol protein [Cucumis melo var. makuwa]	[more]
TYK01613.1	3.0e-295	96.60	pol protein [Cucumis melo var. makuwa]	[more]
KAA0037244.1	3.9e-295	96.41	reverse transcriptase [Cucumis melo var. makuwa]	[more]

BLAST of Cmc02g0047021 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P04323	5.1e-88	40.69	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P20825	7.3e-87	40.05	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P0CT41	2.9e-83	33.02	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	2.9e-83	33.02	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	2.9e-83	33.02	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc02g0047021 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T0M7	5.9e-297	99.81	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57...	[more]
A0A5A7U330	2.2e-296	96.79	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43...	[more]
A0A5A7THE6	8.5e-296	96.60	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold52...	[more]
A0A5D3BPI1	1.4e-295	96.60	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45...	[more]
A0A5A7T190	1.9e-295	96.41	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37...	[more]

BLAST of Cmc02g0047021 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	2.3e-27	45.04	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 36..195 e-value: 3.5E-28 score: 98.6
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 17..196 score: 10.310547
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 1..121 e-value: 1.1E-86 score: 291.5
None	No IPR available	PANTHER	PTHR24559:SF324	TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 2..401
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 2..401
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 290..405 e-value: 1.29436E-57 score: 185.774
None	No IPR available	CDD	cd01647	RT_LTR	coord: 20..196 e-value: 4.20242E-97 score: 289.881
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 286..383 e-value: 4.6E-34 score: 116.9
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 206..295 e-value: 4.9E-31 score: 108.6
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 61..196 e-value: 1.1E-86 score: 291.5
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..389

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc02g0047021.1	Cmc02g0047021.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding