Cmc02g0046701 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc02g0046701
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Gag-pol polyprotein
Location	CMiso1.1chr02: 12009901 .. 12010806 (-)
RNA-Seq Expression	Cmc02g0046701
Synteny	Cmc02g0046701

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTGCTGATTTATGTTATGTGTCAGCAATAGAACCCACATTTGTTGAAAATGCTCTCAAGGATGAATACTGGATAAATACCATGCAAGAAGAGTTACTACAGTTCAAGCGTAACGACGTATGGACTTTGGTTCCTAAACCTGATGGGGCAAACATCATAGGAACTAAGTGGATCTTTAAAAATAAAACTGATGAATCTGGGTGTGTAATAAGGAACAAGGCCCGTTTGGTAGCTCAAGGTTATGCACAGGTAGAAGGTGTTGATTTTGATGAAACGTTTGCACCTGTGGCTAGGCTTGAAGCTATTCGCTTTTTGCTCAGTGTATCCTGTTTTCGAAAATTTAAATTGTATCAAATGGATGTTAAAAGTGCTTTCTTGAATGGATACTTGAATGAGAAAGTCTATGTAGCACAACTTAAAGGGTTTGTTGATTCTGAATTTCCTCAGTATGTTTACAAGCTTAATAATGCTCTATATGGATTAAAGCAAGCACCTAGGACTTGGTATGAACGTTTAACAATGTATCTGGGTAAGAAAGGATATTCCAGGGGAGAAACTGTCAAGACACTGTTTATTAATAGAACCAACACTTATCTCACTGTAGCTCAAATTTATGTTGATGATATTATCTTTGGTGGATTTCCTAAAACACTTGTTAATAACTTCATTGATATAATGAAATCAGAATTCGAAATGAGCTTAGTAGGTGAACTGTCTTACTTTTTGGGGTTGCAGATCAAACAGAGAAGTGAAGGTATATTTATATCGCAAGAAAGGTATGCCAAGAACATAGTCAAGAAGTTTGATCTGGATCATAAACTGTACAGGAGCATGATTGGGAGCCTCTTATATTTAACGGCAAGTAGACCAGATATTGCCTATGCTGTTGGAATATGTGCTTGA

mRNA sequence

ATGATTGCTGATTTATGTTATGTGTCAGCAATAGAACCCACATTTGTTGAAAATGCTCTCAAGGATGAATACTGGATAAATACCATGCAAGAAGAGTTACTACAGTTCAAGCGTAACGACGTATGGACTTTGGTTCCTAAACCTGATGGGGCAAACATCATAGGAACTAAGTGGATCTTTAAAAATAAAACTGATGAATCTGGGTGTGTAATAAGGAACAAGGCCCGTTTGGTAGCTCAAGGTTATGCACAGGTAGAAGGTGTTGATTTTGATGAAACGTTTGCACCTGTGGCTAGGCTTGAAGCTATTCGCTTTTTGCTCAGTGTATCCTGTTTTCGAAAATTTAAATTGTATCAAATGGATGTTAAAAGTGCTTTCTTGAATGGATACTTGAATGAGAAAGTCTATGTAGCACAACTTAAAGGGTTTGTTGATTCTGAATTTCCTCAGTATGTTTACAAGCTTAATAATGCTCTATATGGATTAAAGCAAGCACCTAGGACTTGGTATGAACGTTTAACAATGTATCTGGGTAAGAAAGGATATTCCAGGGGAGAAACTGTCAAGACACTGTTTATTAATAGAACCAACACTTATCTCACTGTAGCTCAAATTTATGTTGATGATATTATCTTTGGTGGATTTCCTAAAACACTTGTTAATAACTTCATTGATATAATGAAATCAGAATTCGAAATGAGCTTAGTAGGTGAACTGTCTTACTTTTTGGGGTTGCAGATCAAACAGAGAAGTGAAGGTATATTTATATCGCAAGAAAGGTATGCCAAGAACATAGTCAAGAAGTTTGATCTGGATCATAAACTGTACAGGAGCATGATTGGGAGCCTCTTATATTTAACGGCAAGTAGACCAGATATTGCCTATGCTGTTGGAATATGTGCTTGA

Coding sequence (CDS)

ATGATTGCTGATTTATGTTATGTGTCAGCAATAGAACCCACATTTGTTGAAAATGCTCTCAAGGATGAATACTGGATAAATACCATGCAAGAAGAGTTACTACAGTTCAAGCGTAACGACGTATGGACTTTGGTTCCTAAACCTGATGGGGCAAACATCATAGGAACTAAGTGGATCTTTAAAAATAAAACTGATGAATCTGGGTGTGTAATAAGGAACAAGGCCCGTTTGGTAGCTCAAGGTTATGCACAGGTAGAAGGTGTTGATTTTGATGAAACGTTTGCACCTGTGGCTAGGCTTGAAGCTATTCGCTTTTTGCTCAGTGTATCCTGTTTTCGAAAATTTAAATTGTATCAAATGGATGTTAAAAGTGCTTTCTTGAATGGATACTTGAATGAGAAAGTCTATGTAGCACAACTTAAAGGGTTTGTTGATTCTGAATTTCCTCAGTATGTTTACAAGCTTAATAATGCTCTATATGGATTAAAGCAAGCACCTAGGACTTGGTATGAACGTTTAACAATGTATCTGGGTAAGAAAGGATATTCCAGGGGAGAAACTGTCAAGACACTGTTTATTAATAGAACCAACACTTATCTCACTGTAGCTCAAATTTATGTTGATGATATTATCTTTGGTGGATTTCCTAAAACACTTGTTAATAACTTCATTGATATAATGAAATCAGAATTCGAAATGAGCTTAGTAGGTGAACTGTCTTACTTTTTGGGGTTGCAGATCAAACAGAGAAGTGAAGGTATATTTATATCGCAAGAAAGGTATGCCAAGAACATAGTCAAGAAGTTTGATCTGGATCATAAACTGTACAGGAGCATGATTGGGAGCCTCTTATATTTAACGGCAAGTAGACCAGATATTGCCTATGCTGTTGGAATATGTGCTTGA

Protein sequence

MIADLCYVSAIEPTFVENALKDEYWINTMQEELLQFKRNDVWTLVPKPDGANIIGTKWIFKNKTDESGCVIRNKARLVAQGYAQVEGVDFDETFAPVARLEAIRFLLSVSCFRKFKLYQMDVKSAFLNGYLNEKVYVAQLKGFVDSEFPQYVYKLNNALYGLKQAPRTWYERLTMYLGKKGYSRGETVKTLFINRTNTYLTVAQIYVDDIIFGGFPKTLVNNFIDIMKSEFEMSLVGELSYFLGLQIKQRSEGIFISQERYAKNIVKKFDLDHKLYRSMIGSLLYLTASRPDIAYAVGICA

Homology

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BLAST of Cmc02g0046701 vs. NCBI nr
Match: KAA0038418.1 (gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 606.3 bits (1562), Expect = 1.4e-169
Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 0


Query: 1   MIADLCYVSAIEPTFVENALKDEYWINTMQEELLQFKRNDVWTLVPKPDGANIIGTKWIF 60
           MIADLCYVSAIEPTFVENALKDEYWINTMQEELLQFKRNDVWTLVPKPDGANIIGTKWIF
Sbjct: 48  MIADLCYVSAIEPTFVENALKDEYWINTMQEELLQFKRNDVWTLVPKPDGANIIGTKWIF 107

Query: 61  KNKTDESGCVIRNKARLVAQGYAQVEGVDFDETFAPVARLEAIRFLLSVSCFRKFKLYQM 120
           KNKTDESGCVIRNKARLVAQGYAQVEGVDFDETFAPVARLEAIRFLLSVSCFRKFKLYQM
Sbjct: 108 KNKTDESGCVIRNKARLVAQGYAQVEGVDFDETFAPVARLEAIRFLLSVSCFRKFKLYQM 167

Query: 121 DVKSAFLNGYLNEKVYVAQLKGFVDSEFPQYVYKLNNALYGLKQAPRTWYERLTMYLGKK 180
           DVKSAFLNGYLNEKVYVAQLKGFVDSEFPQYVYKLNNALYGLKQAPRTWYERLTMYLGKK
Sbjct: 168 DVKSAFLNGYLNEKVYVAQLKGFVDSEFPQYVYKLNNALYGLKQAPRTWYERLTMYLGKK 227

Query: 181 GYSRGETVKTLFINRTNTYLTVAQIYVDDIIFGGFPKTLVNNFIDIMKSEFEMSLVGELS 240
           GYSRGETVKTLFINRTNTYLTVAQIYVDDIIFGGFPKTLVNNFIDIMKSEFEMSLVGELS
Sbjct: 228 GYSRGETVKTLFINRTNTYLTVAQIYVDDIIFGGFPKTLVNNFIDIMKSEFEMSLVGELS 287

Query: 241 YFLGLQIKQRSEGIFISQERYAKNIVKKFDLDHKLYRSMIGSLLYLTASRPDIAYAVGIC 300
           YFLGLQIKQRSEGIFISQERYAKNIVKKFDLDHKLYRSMIGSLLYLTASRPDIAYAVGIC
Sbjct: 288 YFLGLQIKQRSEGIFISQERYAKNIVKKFDLDHKLYRSMIGSLLYLTASRPDIAYAVGIC 347

Query: 301 A 302
           A
Sbjct: 348 A 348

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BLAST of Cmc02g0046701 vs. NCBI nr
Match: TYJ96974.1 (gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 592.0 bits (1525), Expect = 2.8e-165
Identity = 295/300 (98.33%), Postives = 297/300 (99.00%), Query Frame = 0


Query: 2   IADLCYVSAIEPTFVENALKDEYWINTMQEELLQFKRNDVWTLVPKPDGANIIGTKWIFK 61
           IADLCYVSAIEPTFVENALKDEYWINTMQEELLQFKRNDVWTLVPKPDG NIIGTKWIFK
Sbjct: 49  IADLCYVSAIEPTFVENALKDEYWINTMQEELLQFKRNDVWTLVPKPDGGNIIGTKWIFK 108

Query: 62  NKTDESGCVIRNKARLVAQGYAQVEGVDFDETFAPVARLEAIRFLLSVSCFRKFKLYQMD 121
           NKTDESGCVIRNKARLVAQGYAQVEGVDFDETFAPVARLEAIRFLLSVSCFRKFKLYQ+D
Sbjct: 109 NKTDESGCVIRNKARLVAQGYAQVEGVDFDETFAPVARLEAIRFLLSVSCFRKFKLYQID 168

Query: 122 VKSAFLNGYLNEKVYVAQLKGFVDSEFPQYVYKLNNALYGLKQAPRTWYERLTMYLGKKG 181
           VKSAFLNGYLNEKVYVAQLKGFVDSEFPQYVYKLNNALYGLKQAPRT YERLTMYLGKKG
Sbjct: 169 VKSAFLNGYLNEKVYVAQLKGFVDSEFPQYVYKLNNALYGLKQAPRTCYERLTMYLGKKG 228

Query: 182 YSRGETVKTLFINRTNTYLTVAQIYVDDIIFGGFPKTLVNNFIDIMKSEFEMSLVGELSY 241
           YSRGETVKTLFINRTNTYLTVAQIYVDDIIFGGFPKTLVNNFIDIMKSEFEMSLVGELSY
Sbjct: 229 YSRGETVKTLFINRTNTYLTVAQIYVDDIIFGGFPKTLVNNFIDIMKSEFEMSLVGELSY 288

Query: 242 FLGLQIKQRSEGIFISQERYAKNIVKKFDLDHKLYRSMIGSLLYLTASRPDIAYAVGICA 301
           FLGLQIKQRSEGIFISQE YAKNIVKKFDLDHKLYRSMIGSLLYLTASRP+IAYAVGICA
Sbjct: 289 FLGLQIKQRSEGIFISQESYAKNIVKKFDLDHKLYRSMIGSLLYLTASRPNIAYAVGICA 348

[Close]

BLAST of Cmc02g0046701 vs. NCBI nr
Match: KAA0035705.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK30841.1 gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 515.8 bits (1327), Expect = 2.6e-142
Identity = 264/319 (82.76%), Postives = 275/319 (86.21%), Query Frame = 0


Query: 8   VSAIEPTFVENALKDEYWINTMQEELLQFKRNDVWTLVPKPDGANIIGTKWIFKNKTDES 67
           + AI+PT VENALKDEYWIN MQEELLQFKRNDVWTLVPKPDGANIIGTKWIF+NKTDES
Sbjct: 59  IIAIKPTSVENALKDEYWINVMQEELLQFKRNDVWTLVPKPDGANIIGTKWIFRNKTDES 118

Query: 68  GCVIRNKARLVAQGYAQVEGVDFDETFAPVARLEAIRFLLSVSCFRKFKLYQMDVKSAFL 127
           GCVIRN+ARLVAQGYAQVEGV FDETFAPVARLEAI  LLSVS FRKFKLYQMD+KSAFL
Sbjct: 119 GCVIRNRARLVAQGYAQVEGVGFDETFAPVARLEAILLLLSVSYFRKFKLYQMDIKSAFL 178

Query: 128 NGYLNEKVYVAQLKGFVDSEFPQYVYKLNNALYGLKQAPRTWYERLTMYLGKKGYSRGET 187
           NGYLNE+VYVAQ KGF+DSEFPQYVYKLN ALYGLKQAPR WYE LTMYLGKKGYS+GET
Sbjct: 179 NGYLNEEVYVAQPKGFIDSEFPQYVYKLNKALYGLKQAPRAWYECLTMYLGKKGYSKGET 238

Query: 188 VKTLFINRTNTYLTVAQIYVDDIIFGGFPKTLVNNFIDIMKSEFEMSLVGELSYFLGLQI 247
            KTLFIN+TN  L VAQIYVDDIIFGGFPK LVNNFIDI+KSEFEMSLVGELSYFLGLQI
Sbjct: 239 DKTLFINKTNIDLIVAQIYVDDIIFGGFPKILVNNFIDIIKSEFEMSLVGELSYFLGLQI 298

Query: 248 KQRSEGIFISQERYAKNIVKKFDL-------------------------DHKLYRSMIGS 302
           KQRSEGIFISQE+YAKNIVKKF L                         DHKLYRSMIGS
Sbjct: 299 KQRSEGIFISQEKYAKNIVKKFCLDQSQDKRTPAATHAKITKDSIGTAVDHKLYRSMIGS 358

[Close]

BLAST of Cmc02g0046701 vs. NCBI nr
Match: TYJ98295.1 (gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 489.6 bits (1259), Expect = 2.0e-134
Identity = 246/306 (80.39%), Postives = 266/306 (86.93%), Query Frame = 0


Query: 21  KDEYWINTMQEELLQFKRNDVWTLVPKPDGANIIGTKWIFKNKTDESGCVIRNKARLVAQ 80
           KDEYWIN MQEELLQFK N+VWTLVPKPDGANIIGTKWIFKNKTDESG V+RNKA LVAQ
Sbjct: 434 KDEYWINVMQEELLQFKHNNVWTLVPKPDGANIIGTKWIFKNKTDESGSVVRNKACLVAQ 493

Query: 81  GYAQVEGVDFDETFAPVARLEAIRFLLSVSCFRKFKLYQMDVKSAFLNGYLNEKVYVAQL 140
           GYAQVEGVDFDETFAPVARLEAIR LL +SCFRKFKL+QMDVKSAFLNGYLNE+VYVAQ 
Sbjct: 494 GYAQVEGVDFDETFAPVARLEAIRLLLRISCFRKFKLFQMDVKSAFLNGYLNEEVYVAQP 553

Query: 141 KGFVDSEFPQYVYKLNNALYGLKQAPRTWYERLTMYLGKKGYSRGETVKTLFINRTNTYL 200
           KGF+DSEFPQYVYK+N ALYGLKQAPR WYERL +YL ++GYS+GET KTLFINRT+T L
Sbjct: 554 KGFIDSEFPQYVYKINKALYGLKQAPRAWYERLIIYLDERGYSKGETDKTLFINRTSTDL 613

Query: 201 TVAQIYVDDIIFGGFPKTLVNNFIDIMKSEFEMSLVGELSYFLGLQIKQRSEGIFISQER 260
            VAQIYVDDIIFGGFPKTLVNNFI+I+KSEFE+SLVG+LSYFLGLQIKQRS+G+FISQE+
Sbjct: 614 IVAQIYVDDIIFGGFPKTLVNNFINIIKSEFEISLVGKLSYFLGLQIKQRSKGMFISQEK 673

Query: 261 YAKNIVKKFDL-------------------------DHKLYRSMIGSLLYLTASRPDIAY 302
           YAKN+VKKF L                         DHKLYRSMIGSLLYLTASRPDIAY
Sbjct: 674 YAKNLVKKFGLDQSQYKRTLAATHVKITKDTVGTAIDHKLYRSMIGSLLYLTASRPDIAY 733

[Close]

BLAST of Cmc02g0046701 vs. NCBI nr
Match: KAA0042206.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK26777.1 gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 487.3 bits (1253), Expect = 9.8e-134
Identity = 248/310 (80.00%), Postives = 266/310 (85.81%), Query Frame = 0


Query: 17   ENALKDEYWINTMQEELLQFKRNDVWTLVPKPDGANIIGTKWIFKNKTDESGCVIRNKAR 76
            +NALKDEYWIN MQEELLQFKRN++WTLVPKPD ANIIGTKWIFKNKTDES  VIRN+AR
Sbjct: 755  KNALKDEYWINVMQEELLQFKRNNIWTLVPKPDVANIIGTKWIFKNKTDESESVIRNEAR 814

Query: 77   LVAQGYAQVEGVDFDETFAPVARLEAIRFLLSVSCFRKFKLYQMDVKSAFLNGYLNEKVY 136
            LVAQGYAQV+GVDF++TFAPVARLEAIR LLS+SCFRKFKL+QMDVKSAFLNGYLNE+VY
Sbjct: 815  LVAQGYAQVKGVDFNKTFAPVARLEAIRLLLSISCFRKFKLFQMDVKSAFLNGYLNEEVY 874

Query: 137  VAQLKGFVDSEFPQYVYKLNNALYGLKQAPRTWYERLTMYLGKKGYSRGETVKTLFINRT 196
            VAQLK FVDSEFPQYVYK N ALYGLKQAPR WYE+LTMYL ++GYSRGE  KTLFINRT
Sbjct: 875  VAQLKRFVDSEFPQYVYKQNKALYGLKQAPRAWYEQLTMYLSERGYSRGENDKTLFINRT 934

Query: 197  NTYLTVAQIYVDDIIFGGFPKTLVNNFIDIMKSEFEMSLVGELSYFLGLQIKQRSEGIFI 256
            +T L VAQIYVDDIIFGGFPKTLVNNFI+IMKSEFEMSLVGELS FL LQIKQR+EGIFI
Sbjct: 935  STCLIVAQIYVDDIIFGGFPKTLVNNFINIMKSEFEMSLVGELSCFLALQIKQRNEGIFI 994

Query: 257  SQERYAKNIVKKFDL-------------------------DHKLYRSMIGSLLYLTASRP 302
            SQE+Y KN+VKKF L                         DHKLYRSMIGSLLYLTASRP
Sbjct: 995  SQEKYVKNLVKKFGLDHSQHKRIPAATHAKIIKDTVDNAVDHKLYRSMIGSLLYLTASRP 1054

[Close]

BLAST of Cmc02g0046701 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 7.2e-55
Identity = 121/312 (38.78%), Postives = 171/312 (54.81%), Query Frame = 0


Query: 12   EPTFVENALKDEYWINTMQEELLQFKRNDVWTLVPKPDG-ANIIGTKWIFKNKTDESGCV 71
            EP     ALKDE W N M  E+     N  W LVP P     I+G +WIF  K +  G +
Sbjct: 955  EPRTAIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSL 1014

Query: 72   IRNKARLVAQGYAQVEGVDFDETFAPVARLEAIRFLLSVSCFRKFKLYQMDVKSAFLNGY 131
             R KARLVA+GY Q  G+D+ ETF+PV +  +IR +L V+  R + + Q+DV +AFL G 
Sbjct: 1015 NRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGT 1074

Query: 132  LNEKVYVAQLKGFVDSEFPQYVYKLNNALYGLKQAPRTWYERLTMYLGKKGYSRGETVKT 191
            L + VY++Q  GF+D + P YV KL  ALYGLKQAPR WY  L  YL   G+    +  +
Sbjct: 1075 LTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTS 1134

Query: 192  LFINRTNTYLTVAQIYVDDIIFGGFPKTLVNNFIDIMKSEFEMSLVGELSYFLGLQIKQR 251
            LF+ +    +    +YVDDI+  G   TL++N +D +   F +    EL YFLG++ K+ 
Sbjct: 1135 LFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRV 1194

Query: 252  SEGIFISQERYAKNIVKKFDL-------------------------DHKLYRSMIGSLLY 298
              G+ +SQ RY  +++ + ++                         D   YR ++GSL Y
Sbjct: 1195 PTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQY 1254

[Close]

BLAST of Cmc02g0046701 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 2.6e-52
Identity = 113/312 (36.22%), Postives = 170/312 (54.49%), Query Frame = 0


Query: 12   EPTFVENALKDEYWINTMQEELLQFKRNDVWTLV-PKPDGANIIGTKWIFKNKTDESGCV 71
            EP     A+KD+ W   M  E+     N  W LV P P    I+G +WIF  K +  G +
Sbjct: 938  EPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSL 997

Query: 72   IRNKARLVAQGYAQVEGVDFDETFAPVARLEAIRFLLSVSCFRKFKLYQMDVKSAFLNGY 131
             R KARLVA+GY Q  G+D+ ETF+PV +  +IR +L V+  R + + Q+DV +AFL G 
Sbjct: 998  NRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGT 1057

Query: 132  LNEKVYVAQLKGFVDSEFPQYVYKLNNALYGLKQAPRTWYERLTMYLGKKGYSRGETVKT 191
            L ++VY++Q  GFVD + P YV +L  A+YGLKQAPR WY  L  YL   G+    +  +
Sbjct: 1058 LTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTS 1117

Query: 192  LFINRTNTYLTVAQIYVDDIIFGGFPKTLVNNFIDIMKSEFEMSLVGELSYFLGLQIKQR 251
            LF+ +    +    +YVDDI+  G    L+ + +D +   F +    +L YFLG++ K+ 
Sbjct: 1118 LFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRV 1177

Query: 252  SEGIFISQERYAKNIVKKFDL-------------------------DHKLYRSMIGSLLY 298
             +G+ +SQ RY  +++ + ++                         D   YR ++GSL Y
Sbjct: 1178 PQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQY 1237

[Close]

BLAST of Cmc02g0046701 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 183.0 bits (463), Expect = 5.2e-45
Identity = 106/303 (34.98%), Postives = 168/303 (55.45%), Query Frame = 0


Query: 25   WINTMQEELLQFKRNDVWTLVPKPDGANIIGTKWIFKNKTDESGCVIRNKARLVAQGYAQ 84
            W   +  EL   K N+ WT+  +P+  NI+ ++W+F  K +E G  IR KARLVA+G+ Q
Sbjct: 906  WEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQ 965

Query: 85   VEGVDFDETFAPVARLEAIRFLLSVSCFRKFKLYQMDVKSAFLNGYLNEKVYVAQLKGFV 144
               +D++ETFAPVAR+ + RF+LS+      K++QMDVK+AFLNG L E++Y+   +G  
Sbjct: 966  KYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGI- 1025

Query: 145  DSEFPQYVYKLNNALYGLKQAPRTWYERLTMYLGKKGYSRGETVKTLFI---NRTNTYLT 204
             S     V KLN A+YGLKQA R W+E     L +  +      + ++I      N  + 
Sbjct: 1026 -SCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIY 1085

Query: 205  VAQIYVDDIIFGGFPKTLVNNFIDIMKSEFEMSLVGELSYFLGLQIKQRSEGIFISQERY 264
            V  +YVDD++      T +NNF   +  +F M+ + E+ +F+G++I+ + + I++SQ  Y
Sbjct: 1086 VL-LYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAY 1145

Query: 265  AKNIVKKFDLD------------------------HKLYRSMIGSLLY-LTASRPDIAYA 300
             K I+ KF+++                        +   RS+IG L+Y +  +RPD+  A
Sbjct: 1146 VKKILSKFNMENCNAVSTPLPSKINYELLNSDEDCNTPCRSLIGCLMYIMLCTRPDLTTA 1205

[Close]

BLAST of Cmc02g0046701 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.1e-42
Identity = 101/309 (32.69%), Postives = 171/309 (55.34%), Query Frame = 0


Query: 26   INTMQEELLQFKRNDVWTLVPKPDGANIIGTKWIFKNKTDESGCVIRNKARLVAQGYAQV 85
            +  MQEE+   ++N  + LV  P G   +  KW+FK K D    ++R KARLV +G+ Q 
Sbjct: 827  MKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQK 886

Query: 86   EGVDFDETFAPVARLEAIRFLLSVSCFRKFKLYQMDVKSAFLNGYLNEKVYVAQLKGFVD 145
            +G+DFDE F+PV ++ +IR +LS++     ++ Q+DVK+AFL+G L E++Y+ Q +GF  
Sbjct: 887  KGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEV 946

Query: 146  SEFPQYVYKLNNALYGLKQAPRTWYERLTMYLGKKGYSRGETVKTLFINR-TNTYLTVAQ 205
            +     V KLN +LYGLKQAPR WY +   ++  + Y +  +   ++  R +     +  
Sbjct: 947  AGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILL 1006

Query: 206  IYVDDIIFGGFPKTLVNNFIDIMKSEFEMSLVGELSYFLGLQI--KQRSEGIFISQERYA 265
            +YVDD++  G  K L+      +   F+M  +G     LG++I  ++ S  +++SQE+Y 
Sbjct: 1007 LYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYI 1066

Query: 266  KNIVKKFDLDH------------KL-------------------YRSMIGSLLY-LTASR 300
            + ++++F++ +            KL                   Y S +GSL+Y +  +R
Sbjct: 1067 ERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTR 1126

[Close]

BLAST of Cmc02g0046701 vs. ExPASy Swiss-Prot
Match: P92520 (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 GN=AtMg00820 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 4.4e-20
Identity = 50/99 (50.51%), Postives = 61/99 (61.62%), Query Frame = 0


Query: 12  EPTFVENALKDEYWINTMQEELLQFKRNDVWTLVPKPDGANIIGTKWIFKNKTDESGCVI 71
           EP  V  ALKD  W   MQEEL    RN  W LVP P   NI+G KW+FK K    G + 
Sbjct: 27  EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLD 86

Query: 72  RNKARLVAQGYAQVEGVDFDETFAPVARLEAIRFLLSVS 111
           R KARLVA+G+ Q EG+ F ET++PV R   IR +L+V+
Sbjct: 87  RLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125

[Close]

BLAST of Cmc02g0046701 vs. ExPASy TrEMBL
Match: A0A5A7T6D6 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G003170 PE=4 SV=1)

HSP 1 Score: 606.3 bits (1562), Expect = 7.0e-170
Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 0


Query: 1   MIADLCYVSAIEPTFVENALKDEYWINTMQEELLQFKRNDVWTLVPKPDGANIIGTKWIF 60
           MIADLCYVSAIEPTFVENALKDEYWINTMQEELLQFKRNDVWTLVPKPDGANIIGTKWIF
Sbjct: 48  MIADLCYVSAIEPTFVENALKDEYWINTMQEELLQFKRNDVWTLVPKPDGANIIGTKWIF 107

Query: 61  KNKTDESGCVIRNKARLVAQGYAQVEGVDFDETFAPVARLEAIRFLLSVSCFRKFKLYQM 120
           KNKTDESGCVIRNKARLVAQGYAQVEGVDFDETFAPVARLEAIRFLLSVSCFRKFKLYQM
Sbjct: 108 KNKTDESGCVIRNKARLVAQGYAQVEGVDFDETFAPVARLEAIRFLLSVSCFRKFKLYQM 167

Query: 121 DVKSAFLNGYLNEKVYVAQLKGFVDSEFPQYVYKLNNALYGLKQAPRTWYERLTMYLGKK 180
           DVKSAFLNGYLNEKVYVAQLKGFVDSEFPQYVYKLNNALYGLKQAPRTWYERLTMYLGKK
Sbjct: 168 DVKSAFLNGYLNEKVYVAQLKGFVDSEFPQYVYKLNNALYGLKQAPRTWYERLTMYLGKK 227

Query: 181 GYSRGETVKTLFINRTNTYLTVAQIYVDDIIFGGFPKTLVNNFIDIMKSEFEMSLVGELS 240
           GYSRGETVKTLFINRTNTYLTVAQIYVDDIIFGGFPKTLVNNFIDIMKSEFEMSLVGELS
Sbjct: 228 GYSRGETVKTLFINRTNTYLTVAQIYVDDIIFGGFPKTLVNNFIDIMKSEFEMSLVGELS 287

Query: 241 YFLGLQIKQRSEGIFISQERYAKNIVKKFDLDHKLYRSMIGSLLYLTASRPDIAYAVGIC 300
           YFLGLQIKQRSEGIFISQERYAKNIVKKFDLDHKLYRSMIGSLLYLTASRPDIAYAVGIC
Sbjct: 288 YFLGLQIKQRSEGIFISQERYAKNIVKKFDLDHKLYRSMIGSLLYLTASRPDIAYAVGIC 347

Query: 301 A 302
           A
Sbjct: 348 A 348

[Close]

BLAST of Cmc02g0046701 vs. ExPASy TrEMBL
Match: A0A5D3BD92 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold506G00180 PE=4 SV=1)

HSP 1 Score: 592.0 bits (1525), Expect = 1.4e-165
Identity = 295/300 (98.33%), Postives = 297/300 (99.00%), Query Frame = 0


Query: 2   IADLCYVSAIEPTFVENALKDEYWINTMQEELLQFKRNDVWTLVPKPDGANIIGTKWIFK 61
           IADLCYVSAIEPTFVENALKDEYWINTMQEELLQFKRNDVWTLVPKPDG NIIGTKWIFK
Sbjct: 49  IADLCYVSAIEPTFVENALKDEYWINTMQEELLQFKRNDVWTLVPKPDGGNIIGTKWIFK 108

Query: 62  NKTDESGCVIRNKARLVAQGYAQVEGVDFDETFAPVARLEAIRFLLSVSCFRKFKLYQMD 121
           NKTDESGCVIRNKARLVAQGYAQVEGVDFDETFAPVARLEAIRFLLSVSCFRKFKLYQ+D
Sbjct: 109 NKTDESGCVIRNKARLVAQGYAQVEGVDFDETFAPVARLEAIRFLLSVSCFRKFKLYQID 168

Query: 122 VKSAFLNGYLNEKVYVAQLKGFVDSEFPQYVYKLNNALYGLKQAPRTWYERLTMYLGKKG 181
           VKSAFLNGYLNEKVYVAQLKGFVDSEFPQYVYKLNNALYGLKQAPRT YERLTMYLGKKG
Sbjct: 169 VKSAFLNGYLNEKVYVAQLKGFVDSEFPQYVYKLNNALYGLKQAPRTCYERLTMYLGKKG 228

Query: 182 YSRGETVKTLFINRTNTYLTVAQIYVDDIIFGGFPKTLVNNFIDIMKSEFEMSLVGELSY 241
           YSRGETVKTLFINRTNTYLTVAQIYVDDIIFGGFPKTLVNNFIDIMKSEFEMSLVGELSY
Sbjct: 229 YSRGETVKTLFINRTNTYLTVAQIYVDDIIFGGFPKTLVNNFIDIMKSEFEMSLVGELSY 288

Query: 242 FLGLQIKQRSEGIFISQERYAKNIVKKFDLDHKLYRSMIGSLLYLTASRPDIAYAVGICA 301
           FLGLQIKQRSEGIFISQE YAKNIVKKFDLDHKLYRSMIGSLLYLTASRP+IAYAVGICA
Sbjct: 289 FLGLQIKQRSEGIFISQESYAKNIVKKFDLDHKLYRSMIGSLLYLTASRPNIAYAVGICA 348

[Close]

BLAST of Cmc02g0046701 vs. ExPASy TrEMBL
Match: A0A5A7T2M1 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G00360 PE=4 SV=1)

HSP 1 Score: 515.8 bits (1327), Expect = 1.2e-142
Identity = 264/319 (82.76%), Postives = 275/319 (86.21%), Query Frame = 0


Query: 8   VSAIEPTFVENALKDEYWINTMQEELLQFKRNDVWTLVPKPDGANIIGTKWIFKNKTDES 67
           + AI+PT VENALKDEYWIN MQEELLQFKRNDVWTLVPKPDGANIIGTKWIF+NKTDES
Sbjct: 59  IIAIKPTSVENALKDEYWINVMQEELLQFKRNDVWTLVPKPDGANIIGTKWIFRNKTDES 118

Query: 68  GCVIRNKARLVAQGYAQVEGVDFDETFAPVARLEAIRFLLSVSCFRKFKLYQMDVKSAFL 127
           GCVIRN+ARLVAQGYAQVEGV FDETFAPVARLEAI  LLSVS FRKFKLYQMD+KSAFL
Sbjct: 119 GCVIRNRARLVAQGYAQVEGVGFDETFAPVARLEAILLLLSVSYFRKFKLYQMDIKSAFL 178

Query: 128 NGYLNEKVYVAQLKGFVDSEFPQYVYKLNNALYGLKQAPRTWYERLTMYLGKKGYSRGET 187
           NGYLNE+VYVAQ KGF+DSEFPQYVYKLN ALYGLKQAPR WYE LTMYLGKKGYS+GET
Sbjct: 179 NGYLNEEVYVAQPKGFIDSEFPQYVYKLNKALYGLKQAPRAWYECLTMYLGKKGYSKGET 238

Query: 188 VKTLFINRTNTYLTVAQIYVDDIIFGGFPKTLVNNFIDIMKSEFEMSLVGELSYFLGLQI 247
            KTLFIN+TN  L VAQIYVDDIIFGGFPK LVNNFIDI+KSEFEMSLVGELSYFLGLQI
Sbjct: 239 DKTLFINKTNIDLIVAQIYVDDIIFGGFPKILVNNFIDIIKSEFEMSLVGELSYFLGLQI 298

Query: 248 KQRSEGIFISQERYAKNIVKKFDL-------------------------DHKLYRSMIGS 302
           KQRSEGIFISQE+YAKNIVKKF L                         DHKLYRSMIGS
Sbjct: 299 KQRSEGIFISQEKYAKNIVKKFCLDQSQDKRTPAATHAKITKDSIGTAVDHKLYRSMIGS 358

[Close]

BLAST of Cmc02g0046701 vs. ExPASy TrEMBL
Match: A0A5D3BIP9 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold232G00070 PE=4 SV=1)

HSP 1 Score: 489.6 bits (1259), Expect = 9.5e-135
Identity = 246/306 (80.39%), Postives = 266/306 (86.93%), Query Frame = 0


Query: 21  KDEYWINTMQEELLQFKRNDVWTLVPKPDGANIIGTKWIFKNKTDESGCVIRNKARLVAQ 80
           KDEYWIN MQEELLQFK N+VWTLVPKPDGANIIGTKWIFKNKTDESG V+RNKA LVAQ
Sbjct: 434 KDEYWINVMQEELLQFKHNNVWTLVPKPDGANIIGTKWIFKNKTDESGSVVRNKACLVAQ 493

Query: 81  GYAQVEGVDFDETFAPVARLEAIRFLLSVSCFRKFKLYQMDVKSAFLNGYLNEKVYVAQL 140
           GYAQVEGVDFDETFAPVARLEAIR LL +SCFRKFKL+QMDVKSAFLNGYLNE+VYVAQ 
Sbjct: 494 GYAQVEGVDFDETFAPVARLEAIRLLLRISCFRKFKLFQMDVKSAFLNGYLNEEVYVAQP 553

Query: 141 KGFVDSEFPQYVYKLNNALYGLKQAPRTWYERLTMYLGKKGYSRGETVKTLFINRTNTYL 200
           KGF+DSEFPQYVYK+N ALYGLKQAPR WYERL +YL ++GYS+GET KTLFINRT+T L
Sbjct: 554 KGFIDSEFPQYVYKINKALYGLKQAPRAWYERLIIYLDERGYSKGETDKTLFINRTSTDL 613

Query: 201 TVAQIYVDDIIFGGFPKTLVNNFIDIMKSEFEMSLVGELSYFLGLQIKQRSEGIFISQER 260
            VAQIYVDDIIFGGFPKTLVNNFI+I+KSEFE+SLVG+LSYFLGLQIKQRS+G+FISQE+
Sbjct: 614 IVAQIYVDDIIFGGFPKTLVNNFINIIKSEFEISLVGKLSYFLGLQIKQRSKGMFISQEK 673

Query: 261 YAKNIVKKFDL-------------------------DHKLYRSMIGSLLYLTASRPDIAY 302
           YAKN+VKKF L                         DHKLYRSMIGSLLYLTASRPDIAY
Sbjct: 674 YAKNLVKKFGLDQSQYKRTLAATHVKITKDTVGTAIDHKLYRSMIGSLLYLTASRPDIAY 733

[Close]

BLAST of Cmc02g0046701 vs. ExPASy TrEMBL
Match: A0A5D3DSN1 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold124G00770 PE=4 SV=1)

HSP 1 Score: 487.3 bits (1253), Expect = 4.7e-134
Identity = 248/310 (80.00%), Postives = 266/310 (85.81%), Query Frame = 0


Query: 17   ENALKDEYWINTMQEELLQFKRNDVWTLVPKPDGANIIGTKWIFKNKTDESGCVIRNKAR 76
            +NALKDEYWIN MQEELLQFKRN++WTLVPKPD ANIIGTKWIFKNKTDES  VIRN+AR
Sbjct: 755  KNALKDEYWINVMQEELLQFKRNNIWTLVPKPDVANIIGTKWIFKNKTDESESVIRNEAR 814

Query: 77   LVAQGYAQVEGVDFDETFAPVARLEAIRFLLSVSCFRKFKLYQMDVKSAFLNGYLNEKVY 136
            LVAQGYAQV+GVDF++TFAPVARLEAIR LLS+SCFRKFKL+QMDVKSAFLNGYLNE+VY
Sbjct: 815  LVAQGYAQVKGVDFNKTFAPVARLEAIRLLLSISCFRKFKLFQMDVKSAFLNGYLNEEVY 874

Query: 137  VAQLKGFVDSEFPQYVYKLNNALYGLKQAPRTWYERLTMYLGKKGYSRGETVKTLFINRT 196
            VAQLK FVDSEFPQYVYK N ALYGLKQAPR WYE+LTMYL ++GYSRGE  KTLFINRT
Sbjct: 875  VAQLKRFVDSEFPQYVYKQNKALYGLKQAPRAWYEQLTMYLSERGYSRGENDKTLFINRT 934

Query: 197  NTYLTVAQIYVDDIIFGGFPKTLVNNFIDIMKSEFEMSLVGELSYFLGLQIKQRSEGIFI 256
            +T L VAQIYVDDIIFGGFPKTLVNNFI+IMKSEFEMSLVGELS FL LQIKQR+EGIFI
Sbjct: 935  STCLIVAQIYVDDIIFGGFPKTLVNNFINIMKSEFEMSLVGELSCFLALQIKQRNEGIFI 994

Query: 257  SQERYAKNIVKKFDL-------------------------DHKLYRSMIGSLLYLTASRP 302
            SQE+Y KN+VKKF L                         DHKLYRSMIGSLLYLTASRP
Sbjct: 995  SQEKYVKNLVKKFGLDHSQHKRIPAATHAKIIKDTVDNAVDHKLYRSMIGSLLYLTASRP 1054

[Close]

BLAST of Cmc02g0046701 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 191.0 bits (484), Expect = 1.3e-48
Identity = 110/322 (34.16%), Postives = 169/322 (52.48%), Query Frame = 0


Query: 5   LCYVSAIEPTFVENALKDEYWINTMQEELLQFKRNDVWTLVPKPDGANIIGTKWIFKNKT 64
           +C   A EP+    A +   W   M +E+   +    W +   P     IG KW++K K 
Sbjct: 78  VCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKY 137

Query: 65  DESGCVIRNKARLVAQGYAQVEGVDFDETFAPVARLEAIRFLLSVSCFRKFKLYQMDVKS 124
           +  G + R KARLVA+GY Q EG+DF ETF+PV +L +++ +L++S    F L+Q+D+ +
Sbjct: 138 NSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISN 197

Query: 125 AFLNGYLNEKVYVAQLKGFV----DSEFPQYVYKLNNALYGLKQAPRTWYERLTMYLGKK 184
           AFLNG L+E++Y+    G+     DS  P  V  L  ++YGLKQA R W+ + ++ L   
Sbjct: 198 AFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGF 257

Query: 185 GYSRGETVKTLFINRTNTYLTVAQIYVDDIIFGGFPKTLVNNFIDIMKSEFEMSLVGELS 244
           G+ +  +  T F+  T T      +YVDDII        V+     +KS F++  +G L 
Sbjct: 258 GFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLK 317

Query: 245 YFLGLQIKQRSEGIFISQERYAKNIVKKFDL-------------------------DHKL 298
           YFLGL+I + + GI I Q +YA +++ +  L                         D K 
Sbjct: 318 YFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKA 377

[Close]

BLAST of Cmc02g0046701 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 100.1 bits (248), Expect = 3.1e-21
Identity = 50/99 (50.51%), Postives = 61/99 (61.62%), Query Frame = 0


Query: 12  EPTFVENALKDEYWINTMQEELLQFKRNDVWTLVPKPDGANIIGTKWIFKNKTDESGCVI 71
           EP  V  ALKD  W   MQEEL    RN  W LVP P   NI+G KW+FK K    G + 
Sbjct: 27  EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLD 86

Query: 72  RNKARLVAQGYAQVEGVDFDETFAPVARLEAIRFLLSVS 111
           R KARLVA+G+ Q EG+ F ET++PV R   IR +L+V+
Sbjct: 87  RLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125

[Close]

BLAST of Cmc02g0046701 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 76.3 bits (186), Expect = 4.8e-14
Identity = 44/119 (36.97%), Postives = 63/119 (52.94%), Query Frame = 0


Query: 205 IYVDDIIFGGFPKTLVNNFIDIMKSEFEMSLVGELSYFLGLQIKQRSEGIFISQERYAKN 264
           +YVDDI+  G   TL+N  I  + S F M  +G + YFLG+QIK    G+F+SQ +YA+ 
Sbjct: 5   LYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQ 64

Query: 265 IVKKFDL------------------------DHKLYRSMIGSLLYLTASRPDIAYAVGI 300
           I+    +                        D   +RS++G+L YLT +RPDI+YAV I
Sbjct: 65  ILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNI 123

The following BLAST results are available for this feature:

BLAST of Cmc02g0046701 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0038418.1	1.4e-169	100.00	gag-pol polyprotein [Cucumis melo var. makuwa]	[more]
TYJ96974.1	2.8e-165	98.33	gag-pol polyprotein [Cucumis melo var. makuwa]	[more]
KAA0035705.1	2.6e-142	82.76	gag-pol polyprotein [Cucumis melo var. makuwa] >TYK30841.1 gag-pol polyprotein [...	[more]
TYJ98295.1	2.0e-134	80.39	gag-pol polyprotein [Cucumis melo var. makuwa]	[more]
KAA0042206.1	9.8e-134	80.00	gag-pol polyprotein [Cucumis melo var. makuwa] >TYK26777.1 gag-pol polyprotein [...	[more]

BLAST of Cmc02g0046701 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	7.2e-55	38.78	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	2.6e-52	36.22	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P04146	5.2e-45	34.98	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P10978	1.1e-42	32.69	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P92520	4.4e-20	50.51	Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Cmc02g0046701 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T6D6	7.0e-170	100.00	Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G...	[more]
A0A5D3BD92	1.4e-165	98.33	Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold506G...	[more]
A0A5A7T2M1	1.2e-142	82.76	Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G...	[more]
A0A5D3BIP9	9.5e-135	80.39	Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold232G...	[more]
A0A5D3DSN1	4.7e-134	80.00	Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold124G...	[more]

BLAST of Cmc02g0046701 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	1.3e-48	34.16	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00820.1	3.1e-21	50.51	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]
ATMG00810.1	4.8e-14	36.97	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 39..272 e-value: 1.3E-67 score: 228.0
None	No IPR available	PANTHER	PTHR11439:SF351	CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 8	coord: 27..270
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 27..270
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 38..295

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc02g0046701.1	Cmc02g0046701.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding