Cmc02g0046191 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc02g0046191
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Ty3-gypsy retrotransposon protein
Location	CMiso1.1chr02: 10937433 .. 10938188 (+)
RNA-Seq Expression	Cmc02g0046191
Synteny	Cmc02g0046191

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACCTGAAATCGCTGAGTTGAGGACTGCAGAAGTACAACCGCACGCCACAGCTTGTGTAGAATTATCAATTAACTCGATGATTGGATTGAATGACCCGGGAACAATGAAAGTCAGGGGATCATTACAAGGCAGAGAGGTTGTGATATTAATTGACTGTAGCGCCACACACAACTTTGTATCTGAAAAATTAATCGCTTCATTACAACTACCGGTTAAAGAAACTGCCCATTATGGAGTAATCCTCGGATCCGGGACAGCGATACAGGGGAAGGGAATTTGTGAATCGCTAGAAGTTCAAATGAAGAACTGGACAGTGAAGGAGGATTTTCTGCCATTAGAGCTTGGAGGAGTCGATGTGATCCTCGGTATGCAATGGCTATATTCGTTAGGAGTGACGATATGTGATTGGAAGAATCTGACATTGACATTCTACGACAGTGAGAAACAGATCTGTATCAAGGGAGACCCGAGCCTCACTAAAGCAAGGGTAAGCTTGAAGAACTTAGTGAAGACTTGGGAAGAGCATGATCATGGTTATTTGATCGAATGCAGATCCATTGAAGTTGCTGAGTTGAAGGAATTGATGACTTCTCATAAGGAAGAAAAGGAAGAAACGGAAGAAAAGCTGATTCCAATATTGAATCAGTTTAGTGATATATTTGAATGGCCCGAGAAGCTACCGCCACGAAGAATTATAGAACATCACATACATCTTAAGGAGGGCACAAATCCGATTAATGTCAGGCCATAA

mRNA sequence

ATGGAACCTGAAATCGCTGAGTTGAGGACTGCAGAAGTACAACCGCACGCCACAGCTTGTGTAGAATTATCAATTAACTCGATGATTGGATTGAATGACCCGGGAACAATGAAAGTCAGGGGATCATTACAAGGCAGAGAGGTTGTGATATTAATTGACTGTAGCGCCACACACAACTTTGTATCTGAAAAATTAATCGCTTCATTACAACTACCGGTTAAAGAAACTGCCCATTATGGAGTAATCCTCGGATCCGGGACAGCGATACAGGGGAAGGGAATTTGTGAATCGCTAGAAGTTCAAATGAAGAACTGGACAGTGAAGGAGGATTTTCTGCCATTAGAGCTTGGAGGAGTCGATGTGATCCTCGGTATGCAATGGCTATATTCGTTAGGAGTGACGATATGTGATTGGAAGAATCTGACATTGACATTCTACGACAGTGAGAAACAGATCTGTATCAAGGGAGACCCGAGCCTCACTAAAGCAAGGGTAAGCTTGAAGAACTTAGTGAAGACTTGGGAAGAGCATGATCATGGTTATTTGATCGAATGCAGATCCATTGAAGTTGCTGAGTTGAAGGAATTGATGACTTCTCATAAGGAAGAAAAGGAAGAAACGGAAGAAAAGCTGATTCCAATATTGAATCAGTTTAGTGATATATTTGAATGGCCCGAGAAGCTACCGCCACGAAGAATTATAGAACATCACATACATCTTAAGGAGGGCACAAATCCGATTAATGTCAGGCCATAA

Coding sequence (CDS)

ATGGAACCTGAAATCGCTGAGTTGAGGACTGCAGAAGTACAACCGCACGCCACAGCTTGTGTAGAATTATCAATTAACTCGATGATTGGATTGAATGACCCGGGAACAATGAAAGTCAGGGGATCATTACAAGGCAGAGAGGTTGTGATATTAATTGACTGTAGCGCCACACACAACTTTGTATCTGAAAAATTAATCGCTTCATTACAACTACCGGTTAAAGAAACTGCCCATTATGGAGTAATCCTCGGATCCGGGACAGCGATACAGGGGAAGGGAATTTGTGAATCGCTAGAAGTTCAAATGAAGAACTGGACAGTGAAGGAGGATTTTCTGCCATTAGAGCTTGGAGGAGTCGATGTGATCCTCGGTATGCAATGGCTATATTCGTTAGGAGTGACGATATGTGATTGGAAGAATCTGACATTGACATTCTACGACAGTGAGAAACAGATCTGTATCAAGGGAGACCCGAGCCTCACTAAAGCAAGGGTAAGCTTGAAGAACTTAGTGAAGACTTGGGAAGAGCATGATCATGGTTATTTGATCGAATGCAGATCCATTGAAGTTGCTGAGTTGAAGGAATTGATGACTTCTCATAAGGAAGAAAAGGAAGAAACGGAAGAAAAGCTGATTCCAATATTGAATCAGTTTAGTGATATATTTGAATGGCCCGAGAAGCTACCGCCACGAAGAATTATAGAACATCACATACATCTTAAGGAGGGCACAAATCCGATTAATGTCAGGCCATAA

Protein sequence

MEPEIAELRTAEVQPHATACVELSINSMIGLNDPGTMKVRGSLQGREVVILIDCSATHNFVSEKLIASLQLPVKETAHYGVILGSGTAIQGKGICESLEVQMKNWTVKEDFLPLELGGVDVILGMQWLYSLGVTICDWKNLTLTFYDSEKQICIKGDPSLTKARVSLKNLVKTWEEHDHGYLIECRSIEVAELKELMTSHKEEKEETEEKLIPILNQFSDIFEWPEKLPPRRIIEHHIHLKEGTNPINVRP

Homology

[Close]

BLAST of Cmc02g0046191 vs. NCBI nr
Match: KAA0038305.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 512.7 bits (1319), Expect = 1.8e-141
Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 0


Query: 1   MEPEIAELRTAEVQPHATACVELSINSMIGLNDPGTMKVRGSLQGREVVILIDCSATHNF 60
           MEPEIAELRTAEVQPHATACVELSINSMIGLNDPGTMKVRGSLQGREVVILIDCSATHNF
Sbjct: 206 MEPEIAELRTAEVQPHATACVELSINSMIGLNDPGTMKVRGSLQGREVVILIDCSATHNF 265

Query: 61  VSEKLIASLQLPVKETAHYGVILGSGTAIQGKGICESLEVQMKNWTVKEDFLPLELGGVD 120
           VSEKLIASLQLPVKETAHYGVILGSGTAIQGKGICESLEVQMKNWTVKEDFLPLELGGVD
Sbjct: 266 VSEKLIASLQLPVKETAHYGVILGSGTAIQGKGICESLEVQMKNWTVKEDFLPLELGGVD 325

Query: 121 VILGMQWLYSLGVTICDWKNLTLTFYDSEKQICIKGDPSLTKARVSLKNLVKTWEEHDHG 180
           VILGMQWLYSLGVTICDWKNLTLTFYDSEKQICIKGDPSLTKARVSLKNLVKTWEEHDHG
Sbjct: 326 VILGMQWLYSLGVTICDWKNLTLTFYDSEKQICIKGDPSLTKARVSLKNLVKTWEEHDHG 385

Query: 181 YLIECRSIEVAELKELMTSHKEEKEETEEKLIPILNQFSDIFEWPEKLPPRRIIEHHIHL 240
           YLIECRSIEVAELKELMTSHKEEKEETEEKLIPILNQFSDIFEWPEKLPPRRIIEHHIHL
Sbjct: 386 YLIECRSIEVAELKELMTSHKEEKEETEEKLIPILNQFSDIFEWPEKLPPRRIIEHHIHL 445

Query: 241 KEGTNPINVRP 252
           KEGTNPINVRP
Sbjct: 446 KEGTNPINVRP 456

[Close]

BLAST of Cmc02g0046191 vs. NCBI nr
Match: TYK19859.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 500.4 bits (1287), Expect = 9.3e-138
Identity = 244/251 (97.21%), Postives = 246/251 (98.01%), Query Frame = 0


Query: 1   MEPEIAELRTAEVQPHATACVELSINSMIGLNDPGTMKVRGSLQGREVVILIDCSATHNF 60
           MEPEIAE RTAEVQPHATACVELSINSMIGLNDPGTMKVRGSLQGREVVILIDCSATHNF
Sbjct: 236 MEPEIAESRTAEVQPHATACVELSINSMIGLNDPGTMKVRGSLQGREVVILIDCSATHNF 295

Query: 61  VSEKLIASLQLPVKETAHYGVILGSGTAIQGKGICESLEVQMKNWTVKEDFLPLELGGVD 120
           VSEKL+ASLQLPVKETAHYGVILGSGTAIQGKGICESLEVQMKNWTVKEDFLPLELGGVD
Sbjct: 296 VSEKLVASLQLPVKETAHYGVILGSGTAIQGKGICESLEVQMKNWTVKEDFLPLELGGVD 355

Query: 121 VILGMQWLYSLGVTICDWKNLTLTFYDSEKQICIKGDPSLTKARVSLKNLVKTWEEHDHG 180
           VILGMQWLYSLGVT+CDWKNLTLTFYDSEKQICIKGDPSLTKARVSLK L KTWEEHDHG
Sbjct: 356 VILGMQWLYSLGVTVCDWKNLTLTFYDSEKQICIKGDPSLTKARVSLKKLAKTWEEHDHG 415

Query: 181 YLIECRSIEVAELKELMTSHKEEKEETEEKLIPILNQFSDIFEWPEKLPPRRIIEHHIHL 240
           YLIECRSIEVAELKELMTSHKEEKEETEEKLI ILNQFSDIFEWPEKLPPRR IEHHIHL
Sbjct: 416 YLIECRSIEVAELKELMTSHKEEKEETEEKLIQILNQFSDIFEWPEKLPPRRSIEHHIHL 475

Query: 241 KEGTNPINVRP 252
           KEGTNPINVRP
Sbjct: 476 KEGTNPINVRP 486

[Close]

BLAST of Cmc02g0046191 vs. NCBI nr
Match: KAA0063463.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 463.4 bits (1191), Expect = 1.3e-126
Identity = 221/250 (88.40%), Postives = 237/250 (94.80%), Query Frame = 0


Query: 2   EPEIAELRTAEVQPHATACVELSINSMIGLNDPGTMKVRGSLQGREVVILIDCSATHNFV 61
           E E AE+R AEVQPH T  VELSINS++GLNDPGTMKV+GSLQG+EVVILIDC ATHNFV
Sbjct: 382 EAENAEMRVAEVQPHTTTYVELSINSVVGLNDPGTMKVKGSLQGKEVVILIDCGATHNFV 441

Query: 62  SEKLIASLQLPVKETAHYGVILGSGTAIQGKGICESLEVQMKNWTVKEDFLPLELGGVDV 121
           SEK++ SLQLP+KETAHYGVILGSGTAIQGKGICES+E+QMKNWTVKEDFLPLELGGVDV
Sbjct: 442 SEKIVTSLQLPIKETAHYGVILGSGTAIQGKGICESVEIQMKNWTVKEDFLPLELGGVDV 501

Query: 122 ILGMQWLYSLGVTICDWKNLTLTFYDSEKQICIKGDPSLTKARVSLKNLVKTWEEHDHGY 181
           ILGMQWLYSLGVTICDWKNLTLTFYD+EKQICIKGDPSLTKARVSLKNLVKTWEEHDHGY
Sbjct: 502 ILGMQWLYSLGVTICDWKNLTLTFYDNEKQICIKGDPSLTKARVSLKNLVKTWEEHDHGY 561

Query: 182 LIECRSIEVAELKELMTSHKEEKEETEEKLIPILNQFSDIFEWPEKLPPRRIIEHHIHLK 241
           LIECRS+EVAELK   TSHKEEKEET++KLIPILNQFSD+FEWPEKLPPRR IEH IHLK
Sbjct: 562 LIECRSVEVAELK---TSHKEEKEETKKKLIPILNQFSDVFEWPEKLPPRRSIEHQIHLK 621

Query: 242 EGTNPINVRP 252
           EGTNP+NVRP
Sbjct: 622 EGTNPVNVRP 628

[Close]

BLAST of Cmc02g0046191 vs. NCBI nr
Match: TYK30083.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 463.4 bits (1191), Expect = 1.3e-126
Identity = 221/250 (88.40%), Postives = 237/250 (94.80%), Query Frame = 0


Query: 2   EPEIAELRTAEVQPHATACVELSINSMIGLNDPGTMKVRGSLQGREVVILIDCSATHNFV 61
           E E AE+R AEVQPH T  VELSINS++GLNDPGTMKV+GSLQG+EVVILIDC ATHNFV
Sbjct: 391 EAENAEMRVAEVQPHTTTYVELSINSVVGLNDPGTMKVKGSLQGKEVVILIDCGATHNFV 450

Query: 62  SEKLIASLQLPVKETAHYGVILGSGTAIQGKGICESLEVQMKNWTVKEDFLPLELGGVDV 121
           SEK++ SLQLP+KETAHYGVILGSGTAIQGKGICES+E+QMKNWTVKEDFLPLELGGVDV
Sbjct: 451 SEKIVTSLQLPIKETAHYGVILGSGTAIQGKGICESVEIQMKNWTVKEDFLPLELGGVDV 510

Query: 122 ILGMQWLYSLGVTICDWKNLTLTFYDSEKQICIKGDPSLTKARVSLKNLVKTWEEHDHGY 181
           ILGMQWLYSLGVTICDWKNLTLTFYD+EKQICIKGDPSLTKARVSLKNLVKTWEEHDHGY
Sbjct: 511 ILGMQWLYSLGVTICDWKNLTLTFYDNEKQICIKGDPSLTKARVSLKNLVKTWEEHDHGY 570

Query: 182 LIECRSIEVAELKELMTSHKEEKEETEEKLIPILNQFSDIFEWPEKLPPRRIIEHHIHLK 241
           LIECRS+EVAELK   TSHKEEKEET++KLIPILNQFSD+FEWPEKLPPRR IEH IHLK
Sbjct: 571 LIECRSVEVAELK---TSHKEEKEETKKKLIPILNQFSDVFEWPEKLPPRRSIEHQIHLK 630

Query: 242 EGTNPINVRP 252
           EGTNP+NVRP
Sbjct: 631 EGTNPVNVRP 637

[Close]

BLAST of Cmc02g0046191 vs. NCBI nr
Match: TYK22240.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 463.4 bits (1191), Expect = 1.3e-126
Identity = 221/250 (88.40%), Postives = 237/250 (94.80%), Query Frame = 0


Query: 2   EPEIAELRTAEVQPHATACVELSINSMIGLNDPGTMKVRGSLQGREVVILIDCSATHNFV 61
           E E AE+R AEVQPH T  VELSINS++GLNDPGTMKV+GSLQG+EVVILIDC ATHNFV
Sbjct: 391 EAENAEMRVAEVQPHTTTYVELSINSVVGLNDPGTMKVKGSLQGKEVVILIDCGATHNFV 450

Query: 62  SEKLIASLQLPVKETAHYGVILGSGTAIQGKGICESLEVQMKNWTVKEDFLPLELGGVDV 121
           SEK++ SLQLP+KETAHYGVILGSGTAIQGKGICES+E+QMKNWTVKEDFLPLELGGVDV
Sbjct: 451 SEKIVTSLQLPIKETAHYGVILGSGTAIQGKGICESVEIQMKNWTVKEDFLPLELGGVDV 510

Query: 122 ILGMQWLYSLGVTICDWKNLTLTFYDSEKQICIKGDPSLTKARVSLKNLVKTWEEHDHGY 181
           ILGMQWLYSLGVTICDWKNLTLTFYD+EKQICIKGDPSLTKARVSLKNLVKTWEEHDHGY
Sbjct: 511 ILGMQWLYSLGVTICDWKNLTLTFYDNEKQICIKGDPSLTKARVSLKNLVKTWEEHDHGY 570

Query: 182 LIECRSIEVAELKELMTSHKEEKEETEEKLIPILNQFSDIFEWPEKLPPRRIIEHHIHLK 241
           LIECRS+EVAELK   TSHKEEKEET++KLIPILNQFSD+FEWPEKLPPRR IEH IHLK
Sbjct: 571 LIECRSVEVAELK---TSHKEEKEETKKKLIPILNQFSDVFEWPEKLPPRRSIEHQIHLK 630

Query: 242 EGTNPINVRP 252
           EGTNP+NVRP
Sbjct: 631 EGTNPVNVRP 637

[Close]

BLAST of Cmc02g0046191 vs. ExPASy TrEMBL
Match: A0A5A7TA96 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G001740 PE=4 SV=1)

HSP 1 Score: 512.7 bits (1319), Expect = 8.8e-142
Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 0


Query: 1   MEPEIAELRTAEVQPHATACVELSINSMIGLNDPGTMKVRGSLQGREVVILIDCSATHNF 60
           MEPEIAELRTAEVQPHATACVELSINSMIGLNDPGTMKVRGSLQGREVVILIDCSATHNF
Sbjct: 206 MEPEIAELRTAEVQPHATACVELSINSMIGLNDPGTMKVRGSLQGREVVILIDCSATHNF 265

Query: 61  VSEKLIASLQLPVKETAHYGVILGSGTAIQGKGICESLEVQMKNWTVKEDFLPLELGGVD 120
           VSEKLIASLQLPVKETAHYGVILGSGTAIQGKGICESLEVQMKNWTVKEDFLPLELGGVD
Sbjct: 266 VSEKLIASLQLPVKETAHYGVILGSGTAIQGKGICESLEVQMKNWTVKEDFLPLELGGVD 325

Query: 121 VILGMQWLYSLGVTICDWKNLTLTFYDSEKQICIKGDPSLTKARVSLKNLVKTWEEHDHG 180
           VILGMQWLYSLGVTICDWKNLTLTFYDSEKQICIKGDPSLTKARVSLKNLVKTWEEHDHG
Sbjct: 326 VILGMQWLYSLGVTICDWKNLTLTFYDSEKQICIKGDPSLTKARVSLKNLVKTWEEHDHG 385

Query: 181 YLIECRSIEVAELKELMTSHKEEKEETEEKLIPILNQFSDIFEWPEKLPPRRIIEHHIHL 240
           YLIECRSIEVAELKELMTSHKEEKEETEEKLIPILNQFSDIFEWPEKLPPRRIIEHHIHL
Sbjct: 386 YLIECRSIEVAELKELMTSHKEEKEETEEKLIPILNQFSDIFEWPEKLPPRRIIEHHIHL 445

Query: 241 KEGTNPINVRP 252
           KEGTNPINVRP
Sbjct: 446 KEGTNPINVRP 456

[Close]

BLAST of Cmc02g0046191 vs. ExPASy TrEMBL
Match: A0A5D3D8R4 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold811G00720 PE=4 SV=1)

HSP 1 Score: 500.4 bits (1287), Expect = 4.5e-138
Identity = 244/251 (97.21%), Postives = 246/251 (98.01%), Query Frame = 0


Query: 1   MEPEIAELRTAEVQPHATACVELSINSMIGLNDPGTMKVRGSLQGREVVILIDCSATHNF 60
           MEPEIAE RTAEVQPHATACVELSINSMIGLNDPGTMKVRGSLQGREVVILIDCSATHNF
Sbjct: 236 MEPEIAESRTAEVQPHATACVELSINSMIGLNDPGTMKVRGSLQGREVVILIDCSATHNF 295

Query: 61  VSEKLIASLQLPVKETAHYGVILGSGTAIQGKGICESLEVQMKNWTVKEDFLPLELGGVD 120
           VSEKL+ASLQLPVKETAHYGVILGSGTAIQGKGICESLEVQMKNWTVKEDFLPLELGGVD
Sbjct: 296 VSEKLVASLQLPVKETAHYGVILGSGTAIQGKGICESLEVQMKNWTVKEDFLPLELGGVD 355

Query: 121 VILGMQWLYSLGVTICDWKNLTLTFYDSEKQICIKGDPSLTKARVSLKNLVKTWEEHDHG 180
           VILGMQWLYSLGVT+CDWKNLTLTFYDSEKQICIKGDPSLTKARVSLK L KTWEEHDHG
Sbjct: 356 VILGMQWLYSLGVTVCDWKNLTLTFYDSEKQICIKGDPSLTKARVSLKKLAKTWEEHDHG 415

Query: 181 YLIECRSIEVAELKELMTSHKEEKEETEEKLIPILNQFSDIFEWPEKLPPRRIIEHHIHL 240
           YLIECRSIEVAELKELMTSHKEEKEETEEKLI ILNQFSDIFEWPEKLPPRR IEHHIHL
Sbjct: 416 YLIECRSIEVAELKELMTSHKEEKEETEEKLIQILNQFSDIFEWPEKLPPRRSIEHHIHL 475

Query: 241 KEGTNPINVRP 252
           KEGTNPINVRP
Sbjct: 476 KEGTNPINVRP 486

[Close]

BLAST of Cmc02g0046191 vs. ExPASy TrEMBL
Match: A0A5A7V5U6 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold977G00490 PE=4 SV=1)

HSP 1 Score: 463.4 bits (1191), Expect = 6.1e-127
Identity = 221/250 (88.40%), Postives = 237/250 (94.80%), Query Frame = 0


Query: 2   EPEIAELRTAEVQPHATACVELSINSMIGLNDPGTMKVRGSLQGREVVILIDCSATHNFV 61
           E E AE+R AEVQPH T  VELSINS++GLNDPGTMKV+GSLQG+EVVILIDC ATHNFV
Sbjct: 382 EAENAEMRVAEVQPHTTTYVELSINSVVGLNDPGTMKVKGSLQGKEVVILIDCGATHNFV 441

Query: 62  SEKLIASLQLPVKETAHYGVILGSGTAIQGKGICESLEVQMKNWTVKEDFLPLELGGVDV 121
           SEK++ SLQLP+KETAHYGVILGSGTAIQGKGICES+E+QMKNWTVKEDFLPLELGGVDV
Sbjct: 442 SEKIVTSLQLPIKETAHYGVILGSGTAIQGKGICESVEIQMKNWTVKEDFLPLELGGVDV 501

Query: 122 ILGMQWLYSLGVTICDWKNLTLTFYDSEKQICIKGDPSLTKARVSLKNLVKTWEEHDHGY 181
           ILGMQWLYSLGVTICDWKNLTLTFYD+EKQICIKGDPSLTKARVSLKNLVKTWEEHDHGY
Sbjct: 502 ILGMQWLYSLGVTICDWKNLTLTFYDNEKQICIKGDPSLTKARVSLKNLVKTWEEHDHGY 561

Query: 182 LIECRSIEVAELKELMTSHKEEKEETEEKLIPILNQFSDIFEWPEKLPPRRIIEHHIHLK 241
           LIECRS+EVAELK   TSHKEEKEET++KLIPILNQFSD+FEWPEKLPPRR IEH IHLK
Sbjct: 562 LIECRSVEVAELK---TSHKEEKEETKKKLIPILNQFSDVFEWPEKLPPRRSIEHQIHLK 621

Query: 242 EGTNPINVRP 252
           EGTNP+NVRP
Sbjct: 622 EGTNPVNVRP 628

[Close]

BLAST of Cmc02g0046191 vs. ExPASy TrEMBL
Match: A0A5D3E1V9 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00560 PE=4 SV=1)

HSP 1 Score: 463.4 bits (1191), Expect = 6.1e-127
Identity = 221/250 (88.40%), Postives = 237/250 (94.80%), Query Frame = 0


Query: 2   EPEIAELRTAEVQPHATACVELSINSMIGLNDPGTMKVRGSLQGREVVILIDCSATHNFV 61
           E E AE+R AEVQPH T  VELSINS++GLNDPGTMKV+GSLQG+EVVILIDC ATHNFV
Sbjct: 391 EAENAEMRVAEVQPHTTTYVELSINSVVGLNDPGTMKVKGSLQGKEVVILIDCGATHNFV 450

Query: 62  SEKLIASLQLPVKETAHYGVILGSGTAIQGKGICESLEVQMKNWTVKEDFLPLELGGVDV 121
           SEK++ SLQLP+KETAHYGVILGSGTAIQGKGICES+E+QMKNWTVKEDFLPLELGGVDV
Sbjct: 451 SEKIVTSLQLPIKETAHYGVILGSGTAIQGKGICESVEIQMKNWTVKEDFLPLELGGVDV 510

Query: 122 ILGMQWLYSLGVTICDWKNLTLTFYDSEKQICIKGDPSLTKARVSLKNLVKTWEEHDHGY 181
           ILGMQWLYSLGVTICDWKNLTLTFYD+EKQICIKGDPSLTKARVSLKNLVKTWEEHDHGY
Sbjct: 511 ILGMQWLYSLGVTICDWKNLTLTFYDNEKQICIKGDPSLTKARVSLKNLVKTWEEHDHGY 570

Query: 182 LIECRSIEVAELKELMTSHKEEKEETEEKLIPILNQFSDIFEWPEKLPPRRIIEHHIHLK 241
           LIECRS+EVAELK   TSHKEEKEET++KLIPILNQFSD+FEWPEKLPPRR IEH IHLK
Sbjct: 571 LIECRSVEVAELK---TSHKEEKEETKKKLIPILNQFSDVFEWPEKLPPRRSIEHQIHLK 630

Query: 242 EGTNPINVRP 252
           EGTNP+NVRP
Sbjct: 631 EGTNPVNVRP 637

[Close]

BLAST of Cmc02g0046191 vs. ExPASy TrEMBL
Match: A0A5D3DFT1 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold333G001370 PE=4 SV=1)

HSP 1 Score: 463.4 bits (1191), Expect = 6.1e-127
Identity = 221/250 (88.40%), Postives = 237/250 (94.80%), Query Frame = 0


Query: 2   EPEIAELRTAEVQPHATACVELSINSMIGLNDPGTMKVRGSLQGREVVILIDCSATHNFV 61
           E E AE+R AEVQPH T  VELSINS++GLNDPGTMKV+GSLQG+EVVILIDC ATHNFV
Sbjct: 391 EAENAEMRVAEVQPHTTTYVELSINSVVGLNDPGTMKVKGSLQGKEVVILIDCGATHNFV 450

Query: 62  SEKLIASLQLPVKETAHYGVILGSGTAIQGKGICESLEVQMKNWTVKEDFLPLELGGVDV 121
           SEK++ SLQLP+KETAHYGVILGSGTAIQGKGICES+E+QMKNWTVKEDFLPLELGGVDV
Sbjct: 451 SEKIVTSLQLPIKETAHYGVILGSGTAIQGKGICESVEIQMKNWTVKEDFLPLELGGVDV 510

Query: 122 ILGMQWLYSLGVTICDWKNLTLTFYDSEKQICIKGDPSLTKARVSLKNLVKTWEEHDHGY 181
           ILGMQWLYSLGVTICDWKNLTLTFYD+EKQICIKGDPSLTKARVSLKNLVKTWEEHDHGY
Sbjct: 511 ILGMQWLYSLGVTICDWKNLTLTFYDNEKQICIKGDPSLTKARVSLKNLVKTWEEHDHGY 570

Query: 182 LIECRSIEVAELKELMTSHKEEKEETEEKLIPILNQFSDIFEWPEKLPPRRIIEHHIHLK 241
           LIECRS+EVAELK   TSHKEEKEET++KLIPILNQFSD+FEWPEKLPPRR IEH IHLK
Sbjct: 571 LIECRSVEVAELK---TSHKEEKEETKKKLIPILNQFSDVFEWPEKLPPRRSIEHQIHLK 630

Query: 242 EGTNPINVRP 252
           EGTNP+NVRP
Sbjct: 631 EGTNPVNVRP 637

[Close]

BLAST of Cmc02g0046191 vs. TAIR 10
Match: AT3G29750.1 (Eukaryotic aspartyl protease family protein )

HSP 1 Score: 80.9 bits (198), Expect = 1.6e-15
Identity = 53/175 (30.29%), Postives = 89/175 (50.86%), Query Frame = 0


Query: 37  MKVRGSLQGREVVILIDCSATHNFVSEKLIASLQLPVKETAHYGVILGSGTAIQGKGICE 96
           M+  G +   +VV+ ID  AT NF+  +L  SL+LP   T    V+LG    IQ  G C 
Sbjct: 124 MRFYGFILDHKVVVAIDSGATDNFILVELAFSLKLPTSITNQASVLLGQRQCIQSVGTCL 183

Query: 97  SLEVQMKNWTVKEDFLPLELG--GVDVILGMQWLYSLGVTICDWKNLTLTFYDSEKQICI 156
            + + ++   + E+FL L+L    VDVILG +WL  LG T+ +W+N   +F  +++ I +
Sbjct: 184 GIRLWVQEVEITENFLLLDLAKTDVDVILGYEWLSKLGETMVNWQNQDFSFSHNQQWITL 243

Query: 157 KGDPS-----LTKARVSLKNLVKTWEEHDHGYLIECRSIEVAELKELMTSHKEEK 205
             +        TK ++  +N  +  EE  +    +   + V+ L++ +T   E K
Sbjct: 244 CAEHEELEQVTTKVKMKSENEQEDIEEQRNN---DGEMLVVSYLEDKVTLKGESK 295

[Close]

BLAST of Cmc02g0046191 vs. TAIR 10
Match: AT3G30770.1 (Eukaryotic aspartyl protease family protein )

HSP 1 Score: 68.6 bits (166), Expect = 8.4e-12
Identity = 46/150 (30.67%), Postives = 75/150 (50.00%), Query Frame = 0


Query: 37  MKVRGSLQGREVVILIDCSATHNFVSEKLIASLQLPVKETAHYGVILGSGTAIQGKGICE 96
           M+  G +   +VV++ID  AT+NF+S++L   L+LP   T    V+LG    IQ  G C 
Sbjct: 284 MRFYGFISCHKVVVVIDSGATNNFISDELALVLKLPTSTTNQASVLLGQRQCIQTIGTCF 343

Query: 97  SLEVQMKNWTVKEDFLPLEL--GGVDVILGMQWLYSLGVTICDWKNLTLTFYDSEK--QI 156
            + + ++   + E+FL L+L    VDVILG     +L      W N   +F+ +++   +
Sbjct: 344 GINLLVQEVEINENFLLLDLTKTDVDVILGYGGSQNLERQWLIWLNQDFSFFHNQQWVTL 403

Query: 157 CIKGDPSLTKARVSLKNLVKTWEEHDHGYL 183
           C K D  L +    +K   +  +E    YL
Sbjct: 404 CAK-DKELEQVTTKVKMKSEYEQEKIDHYL 432

[Close]

BLAST of Cmc02g0046191 vs. TAIR 10
Match: AT3G42723.1 (aminoacyl-tRNA ligases;ATP binding;nucleotide binding )

HSP 1 Score: 42.7 bits (99), Expect = 4.9e-04
Identity = 30/124 (24.19%), Postives = 54/124 (43.55%), Query Frame = 0


Query: 33  DPGTMKVRGSLQGREVVILIDCSATHNFVSEKLIASLQLPVKETAHYGVILGSGTAIQGK 92
           D GT+K    L G EV            + +++  S +L                A   K
Sbjct: 460 DTGTLKQEHELPGTEVATCRGMRFYGYILQQEVSFSYRL----------------ASDVK 519

Query: 93  GICESLEVQMKNWTVKEDFL--PLELGGVDVILGMQWLYSLGVTICDWKNLTLTFYDSEK 152
             C+ + +++ +  + ED+    L+   VDVILG +WL  LG T  +W+N + +F  ++ 
Sbjct: 520 RSCQEISLRINDIDIVEDYCVWDLKRDVVDVILGYEWLSKLGETEVNWQNQSFSFIHNQD 567

Query: 153 QICI 155
            + +
Sbjct: 580 WVTL 567

The following BLAST results are available for this feature:

BLAST of Cmc02g0046191 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0038305.1	1.8e-141	100.00	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK19859.1	9.3e-138	97.21	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0063463.1	1.3e-126	88.40	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK30083.1	1.3e-126	88.40	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK22240.1	1.3e-126	88.40	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc02g0046191 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc02g0046191 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TA96	8.8e-142	100.00	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3D8R4	4.5e-138	97.21	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7V5U6	6.1e-127	88.40	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3E1V9	6.1e-127	88.40	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3DFT1	6.1e-127	88.40	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of Cmc02g0046191 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G29750.1	1.6e-15	30.29	Eukaryotic aspartyl protease family protein	[more]
AT3G30770.1	8.4e-12	30.67	Eukaryotic aspartyl protease family protein	[more]
AT3G42723.1	4.9e-04	24.19	aminoacyl-tRNA ligases;ATP binding;nucleotide binding	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 190..210
None	No IPR available	PFAM	PF08284	RVP_2	coord: 48..143 e-value: 7.3E-14 score: 51.7
None	No IPR available	PANTHER	PTHR34482	DNA DAMAGE-INDUCIBLE PROTEIN 1-LIKE	coord: 12..251
None	No IPR available	PANTHER	PTHR34482:SF20	SUBFAMILY NOT NAMED	coord: 12..251
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 39..128 e-value: 2.39329E-19 score: 78.1471
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 26..155 e-value: 3.3E-20 score: 74.2
IPR021109	Aspartic peptidase domain superfamily	SUPERFAMILY	50630	Acid proteases	coord: 36..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc02g0046191.1	Cmc02g0046191.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding