Cmc02g0045281 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc02g0045281
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Gag/pol protein
Location	CMiso1.1chr02: 8904723 .. 8905109 (-)
RNA-Seq Expression	Cmc02g0045281
Synteny	Cmc02g0045281

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAACTCTCTCCCGTTGTTATGCTGAAGTCGATTAGAATACTTTTATCCATCGACACTTTTTATGATTATGAAATTTGGCAGATGGATGTCAAGACAACCTTTTTAAATTTCAATCTTGAAGAGAGTATCTATATGACCCGACTAGAGGGATTTATAGAACAGGGACAAGAACAAAAGGTTTGTAAGCTTCAAAAATCTATTGATGGATTAAAGCATTCATTTATAGCCTGGAATATAAGATTTGATACTGCAATCAAATTTTATGGTTTTGAGCAAAATGCTGACGAACCTTATGTTTACAAAAGGATCGTCAATTCCATTGTAGCATTCTTAGTTTTATATGTCGATGATATCCTACTCATTGGGAATGATGTAGGTTAA

mRNA sequence

ATGGAGAAACTCTCTCCCGTTGTTATGCTGAAGTCGATTAGAATACTTTTATCCATCGACACTTTTTATGATTATGAAATTTGGCAGATGGATGTCAAGACAACCTTTTTAAATTTCAATCTTGAAGAGAGTATCTATATGACCCGACTAGAGGGATTTATAGAACAGGGACAAGAACAAAAGGTTTGTAAGCTTCAAAAATCTATTGATGGATTAAAGCATTCATTTATAGCCTGGAATATAAGATTTGATACTGCAATCAAATTTTATGGTTTTGAGCAAAATGCTGACGAACCTTATGTTTACAAAAGGATCGTCAATTCCATTGTAGCATTCTTAGTTTTATATGTCGATGATATCCTACTCATTGGGAATGATGTAGGTTAA

Coding sequence (CDS)

ATGGAGAAACTCTCTCCCGTTGTTATGCTGAAGTCGATTAGAATACTTTTATCCATCGACACTTTTTATGATTATGAAATTTGGCAGATGGATGTCAAGACAACCTTTTTAAATTTCAATCTTGAAGAGAGTATCTATATGACCCGACTAGAGGGATTTATAGAACAGGGACAAGAACAAAAGGTTTGTAAGCTTCAAAAATCTATTGATGGATTAAAGCATTCATTTATAGCCTGGAATATAAGATTTGATACTGCAATCAAATTTTATGGTTTTGAGCAAAATGCTGACGAACCTTATGTTTACAAAAGGATCGTCAATTCCATTGTAGCATTCTTAGTTTTATATGTCGATGATATCCTACTCATTGGGAATGATGTAGGTTAA

Protein sequence

MEKLSPVVMLKSIRILLSIDTFYDYEIWQMDVKTTFLNFNLEESIYMTRLEGFIEQGQEQKVCKLQKSIDGLKHSFIAWNIRFDTAIKFYGFEQNADEPYVYKRIVNSIVAFLVLYVDDILLIGNDVG

Homology

[Close]

BLAST of Cmc02g0045281 vs. NCBI nr
Match: ADJ18449.1 (gag/pol protein, partial [Bryonia dioica])

HSP 1 Score: 200.7 bits (509), Expect = 7.8e-48
Identity = 102/126 (80.95%), Postives = 109/126 (86.51%), Query Frame = 0


Query: 2    EKLSPVVMLKSIRILLSIDTFYDYEIWQMDVKTTFLNFNLEESIYMTRLEGFIEQGQEQK 61
            E  SPV MLKSIRILLSI TFY+YEIWQMDVKT FLN NLEESIYM + EGFI Q QEQK
Sbjct: 887  ETFSPVAMLKSIRILLSIATFYNYEIWQMDVKTAFLNGNLEESIYMVQPEGFIAQDQEQK 946

Query: 62   VCKLQKSIDGLKHSFIAWNIRFDTAIKFYGFEQNADEPYVYKRIVNSIVAFLVLYVDDIL 121
            VCKLQKSI GLK +  +WNIRFDTAIK YGFEQN DEP VYK+IVNS+VAFL+LYVDDIL
Sbjct: 947  VCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKKIVNSVVAFLILYVDDIL 1006

Query: 122  LIGNDV 128
            LIGNDV
Sbjct: 1007 LIGNDV 1012

[Close]

BLAST of Cmc02g0045281 vs. NCBI nr
Match: KAA0045356.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 200.3 bits (508), Expect = 1.0e-47
Identity = 100/126 (79.37%), Postives = 109/126 (86.51%), Query Frame = 0


Query: 2   EKLSPVVMLKSIRILLSIDTFYDYEIWQMDVKTTFLNFNLEESIYMTRLEGFIEQGQEQK 61
           E  SP+ M+KSIRILLSI TFYDYEIWQMDVKT FLN NLEESIYM + EGFI++GQEQK
Sbjct: 217 ETFSPIAMIKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVQPEGFIQKGQEQK 276

Query: 62  VCKLQKSIDGLKHSFIAWNIRFDTAIKFYGFEQNADEPYVYKRIVNSIVAFLVLYVDDIL 121
           VCKLQKSI GLK +  +WNIRFDT IK YGFEQN DEP VYKRI+NS VAFLVLYVDDIL
Sbjct: 277 VCKLQKSIYGLKQASRSWNIRFDTGIKSYGFEQNVDEPCVYKRIINSTVAFLVLYVDDIL 336

Query: 122 LIGNDV 128
           LIGN+V
Sbjct: 337 LIGNEV 342

[Close]

BLAST of Cmc02g0045281 vs. NCBI nr
Match: TYK09500.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 194.9 bits (494), Expect = 4.3e-46
Identity = 96/120 (80.00%), Postives = 107/120 (89.17%), Query Frame = 0


Query: 9   MLKSIRILLSIDTFYDYEIWQMDVKTTFLNFNLEESIYMTRLEGFIEQGQEQKVCKLQKS 68
           MLKSIRILLSI TFYDYEIWQ+DVKT FLN NLEESIYM + EGFI++GQEQK+CK QKS
Sbjct: 1   MLKSIRILLSIATFYDYEIWQIDVKTAFLNGNLEESIYMAQPEGFIKKGQEQKICKFQKS 60

Query: 69  IDGLKHSFIAWNIRFDTAIKFYGFEQNADEPYVYKRIVNSIVAFLVLYVDDILLIGNDVG 128
           I GLK +  +WNIRFDTAIK YGFEQN D+P VYK++VNSIVAFLVLYVDDILL+GNDVG
Sbjct: 61  IYGLKQASRSWNIRFDTAIKSYGFEQNVDKPCVYKKVVNSIVAFLVLYVDDILLVGNDVG 120

[Close]

BLAST of Cmc02g0045281 vs. NCBI nr
Match: TYK15984.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 194.1 bits (492), Expect = 7.3e-46
Identity = 99/127 (77.95%), Postives = 107/127 (84.25%), Query Frame = 0


Query: 2   EKLSPVVMLKSIRILLSIDTFYDYEIWQMDVKTTFLNFNLEESIYMTRLEGFIEQGQEQK 61
           E  SPV MLKSIRILLSI TFYDYEIWQMDVKT FLN NLEESI+M++ EGFI QGQEQK
Sbjct: 405 ETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQK 464

Query: 62  VCKLQKSIDGLKHSFIAWNIRFDTAIKFYGFEQNADEPYVYKRIVNSIVAFLVLYVDDIL 121
           VCKL +SI GLK +  +WNIRFDTAIK YGF+QN DEP VYK+I    VAFLVLYVDDIL
Sbjct: 465 VCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDIL 524

Query: 122 LIGNDVG 129
           LIGNDVG
Sbjct: 525 LIGNDVG 531

[Close]

BLAST of Cmc02g0045281 vs. NCBI nr
Match: KAA0025945.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0035786.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0040492.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0041262.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 194.1 bits (492), Expect = 7.3e-46
Identity = 99/127 (77.95%), Postives = 107/127 (84.25%), Query Frame = 0


Query: 2   EKLSPVVMLKSIRILLSIDTFYDYEIWQMDVKTTFLNFNLEESIYMTRLEGFIEQGQEQK 61
           E  SPV MLKSIRILLSI TFYDYEIWQMDVKT FLN NLEESI+M++ EGFI QGQEQK
Sbjct: 795 ETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQK 854

Query: 62  VCKLQKSIDGLKHSFIAWNIRFDTAIKFYGFEQNADEPYVYKRIVNSIVAFLVLYVDDIL 121
           VCKL +SI GLK +  +WNIRFDTAIK YGF+QN DEP VYK+I    VAFLVLYVDDIL
Sbjct: 855 VCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDIL 914

Query: 122 LIGNDVG 129
           LIGNDVG
Sbjct: 915 LIGNDVG 921

[Close]

BLAST of Cmc02g0045281 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.2e-21
Identity = 57/128 (44.53%), Postives = 81/128 (63.28%), Query Frame = 0


Query: 2    EKLSPVVMLKSIRILLSIDTFYDYEIWQMDVKTTFLNFNLEESIYMTRLEGFIEQGQEQK 61
            E  SPVV + SIR +LS+    D E+ Q+DVKT FL+ +LEE IYM + EGF   G++  
Sbjct: 893  EIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHM 952

Query: 62   VCKLQKSIDGLKHSFIAWNIRFDTAIKFYGFEQNADEPYVY-KRIVNSIVAFLVLYVDDI 121
            VCKL KS+ GLK +   W ++FD+ +K   + +   +P VY KR   +    L+LYVDD+
Sbjct: 953  VCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDM 1012

Query: 122  LLIGNDVG 129
            L++G D G
Sbjct: 1013 LIVGKDKG 1020

[Close]

BLAST of Cmc02g0045281 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 6.9e-15
Identity = 42/125 (33.60%), Postives = 70/125 (56.00%), Query Frame = 0


Query: 2    EKLSPVVMLKSIRILLSIDTFYDYEIWQMDVKTTFLNFNLEESIYMTRLEGFIEQGQEQK 61
            E  SPV+   SIRI+L +     + I Q+DV   FL   L + +YM++  GFI++ +   
Sbjct: 1036 ETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNY 1095

Query: 62   VCKLQKSIDGLKHSFIAWNIRFDTAIKFYGFEQNADEPYVYKRIVNSIVAFLVLYVDDIL 121
            VCKL+K++ GLK +  AW +     +   GF  +  +  ++       + ++++YVDDIL
Sbjct: 1096 VCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYMLVYVDDIL 1155

Query: 122  LIGND 127
            + GND
Sbjct: 1156 ITGND 1160

[Close]

BLAST of Cmc02g0045281 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 6.9e-15
Identity = 42/125 (33.60%), Postives = 71/125 (56.80%), Query Frame = 0


Query: 2    EKLSPVVMLKSIRILLSIDTFYDYEIWQMDVKTTFLNFNLEESIYMTRLEGFIEQGQEQK 61
            E  SPV+   SIRI+L +     + I Q+DV   FL   L + +YM++  GF+++ +   
Sbjct: 1019 ETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDY 1078

Query: 62   VCKLQKSIDGLKHSFIAWNIRFDTAIKFYGFEQNADEPYVYKRIVNSIVAFLVLYVDDIL 121
            VC+L+K+I GLK +  AW +   T +   GF  +  +  ++       + ++++YVDDIL
Sbjct: 1079 VCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDIL 1138

Query: 122  LIGND 127
            + GND
Sbjct: 1139 ITGND 1143

[Close]

BLAST of Cmc02g0045281 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 73.6 bits (179), Expect = 1.9e-12
Identity = 46/129 (35.66%), Postives = 72/129 (55.81%), Query Frame = 0


Query: 2    EKLSPVVMLKSIRILLSIDTFYDYEIWQMDVKTTFLNFNLEESIYMTRLEGFIEQGQEQK 61
            E  +PV  + S R +LS+   Y+ ++ QMDVKT FLN  L+E IYM   +G         
Sbjct: 973  ETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGI--SCNSDN 1032

Query: 62   VCKLQKSIDGLKHSFIAWNIRFDTAIKFYGFEQNADEPYVY---KRIVNSIVAFLVLYVD 121
            VCKL K+I GLK +   W   F+ A+K   F  ++ +  +Y   K  +N  + +++LYVD
Sbjct: 1033 VCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENI-YVLLYVD 1092

Query: 122  DILLIGNDV 128
            D+++   D+
Sbjct: 1093 DVVIATGDM 1098

[Close]

BLAST of Cmc02g0045281 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 58.2 bits (139), Expect = 8.2e-08
Identity = 30/93 (32.26%), Postives = 51/93 (54.84%), Query Frame = 0


Query: 30  MDVKTTFLNFNLEESIYMTRLEGFIEQGQEQKVCKLQKSIDGLKHSFIAWNIRFDTAIKF 89
           MDV T FLN  ++E IY+ +  GF+ +     V +L   + GLK + + WN   +  +K 
Sbjct: 1   MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60

Query: 90  YGFEQNADEPYVYKRIVNSIVAFLVLYVDDILL 123
            GF ++  E  +Y R  +    ++ +YVDD+L+
Sbjct: 61  IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLV 93

[Close]

BLAST of Cmc02g0045281 vs. ExPASy TrEMBL
Match: E2GK51 (Gag/pol protein (Fragment) OS=Bryonia dioica OX=3652 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 3.8e-48
Identity = 102/126 (80.95%), Postives = 109/126 (86.51%), Query Frame = 0


Query: 2    EKLSPVVMLKSIRILLSIDTFYDYEIWQMDVKTTFLNFNLEESIYMTRLEGFIEQGQEQK 61
            E  SPV MLKSIRILLSI TFY+YEIWQMDVKT FLN NLEESIYM + EGFI Q QEQK
Sbjct: 887  ETFSPVAMLKSIRILLSIATFYNYEIWQMDVKTAFLNGNLEESIYMVQPEGFIAQDQEQK 946

Query: 62   VCKLQKSIDGLKHSFIAWNIRFDTAIKFYGFEQNADEPYVYKRIVNSIVAFLVLYVDDIL 121
            VCKLQKSI GLK +  +WNIRFDTAIK YGFEQN DEP VYK+IVNS+VAFL+LYVDDIL
Sbjct: 947  VCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKKIVNSVVAFLILYVDDIL 1006

Query: 122  LIGNDV 128
            LIGNDV
Sbjct: 1007 LIGNDV 1012

[Close]

BLAST of Cmc02g0045281 vs. ExPASy TrEMBL
Match: A0A5A7TTA2 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G001350 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 4.9e-48
Identity = 100/126 (79.37%), Postives = 109/126 (86.51%), Query Frame = 0


Query: 2   EKLSPVVMLKSIRILLSIDTFYDYEIWQMDVKTTFLNFNLEESIYMTRLEGFIEQGQEQK 61
           E  SP+ M+KSIRILLSI TFYDYEIWQMDVKT FLN NLEESIYM + EGFI++GQEQK
Sbjct: 217 ETFSPIAMIKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMVQPEGFIQKGQEQK 276

Query: 62  VCKLQKSIDGLKHSFIAWNIRFDTAIKFYGFEQNADEPYVYKRIVNSIVAFLVLYVDDIL 121
           VCKLQKSI GLK +  +WNIRFDT IK YGFEQN DEP VYKRI+NS VAFLVLYVDDIL
Sbjct: 277 VCKLQKSIYGLKQASRSWNIRFDTGIKSYGFEQNVDEPCVYKRIINSTVAFLVLYVDDIL 336

Query: 122 LIGNDV 128
           LIGN+V
Sbjct: 337 LIGNEV 342

[Close]

BLAST of Cmc02g0045281 vs. ExPASy TrEMBL
Match: A0A5D3CDT9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold499G001020 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 2.1e-46
Identity = 96/120 (80.00%), Postives = 107/120 (89.17%), Query Frame = 0


Query: 9   MLKSIRILLSIDTFYDYEIWQMDVKTTFLNFNLEESIYMTRLEGFIEQGQEQKVCKLQKS 68
           MLKSIRILLSI TFYDYEIWQ+DVKT FLN NLEESIYM + EGFI++GQEQK+CK QKS
Sbjct: 1   MLKSIRILLSIATFYDYEIWQIDVKTAFLNGNLEESIYMAQPEGFIKKGQEQKICKFQKS 60

Query: 69  IDGLKHSFIAWNIRFDTAIKFYGFEQNADEPYVYKRIVNSIVAFLVLYVDDILLIGNDVG 128
           I GLK +  +WNIRFDTAIK YGFEQN D+P VYK++VNSIVAFLVLYVDDILL+GNDVG
Sbjct: 61  IYGLKQASRSWNIRFDTAIKSYGFEQNVDKPCVYKKVVNSIVAFLVLYVDDILLVGNDVG 120

[Close]

BLAST of Cmc02g0045281 vs. ExPASy TrEMBL
Match: A0A5A7TZD0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00090 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 3.5e-46
Identity = 99/127 (77.95%), Postives = 107/127 (84.25%), Query Frame = 0


Query: 2   EKLSPVVMLKSIRILLSIDTFYDYEIWQMDVKTTFLNFNLEESIYMTRLEGFIEQGQEQK 61
           E  SPV MLKSIRILLSI TFYDYEIWQMDVKT FLN NLEESI+M++ EGFI QGQEQK
Sbjct: 795 ETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQK 854

Query: 62  VCKLQKSIDGLKHSFIAWNIRFDTAIKFYGFEQNADEPYVYKRIVNSIVAFLVLYVDDIL 121
           VCKL +SI GLK +  +WNIRFDTAIK YGF+QN DEP VYK+I    VAFLVLYVDDIL
Sbjct: 855 VCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDIL 914

Query: 122 LIGNDVG 129
           LIGNDVG
Sbjct: 915 LIGNDVG 921

[Close]

BLAST of Cmc02g0045281 vs. ExPASy TrEMBL
Match: A0A5D3CYF4 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94G001110 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 3.5e-46
Identity = 99/127 (77.95%), Postives = 107/127 (84.25%), Query Frame = 0


Query: 2   EKLSPVVMLKSIRILLSIDTFYDYEIWQMDVKTTFLNFNLEESIYMTRLEGFIEQGQEQK 61
           E  SPV MLKSIRILLSI TFYDYEIWQMDVKT FLN NLEESI+M++ EGFI QGQEQK
Sbjct: 405 ETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQK 464

Query: 62  VCKLQKSIDGLKHSFIAWNIRFDTAIKFYGFEQNADEPYVYKRIVNSIVAFLVLYVDDIL 121
           VCKL +SI GLK +  +WNIRFDTAIK YGF+QN DEP VYK+I    VAFLVLYVDDIL
Sbjct: 465 VCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDIL 524

Query: 122 LIGNDVG 129
           LIGNDVG
Sbjct: 525 LIGNDVG 531

[Close]

BLAST of Cmc02g0045281 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 80.9 bits (198), Expect = 8.3e-16
Identity = 43/130 (33.08%), Postives = 75/130 (57.69%), Query Frame = 0


Query: 1   MEKLSPVVMLKSIRILLSIDTFYDYEIWQMDVKTTFLNFNLEESIYMTRLEGF-IEQGQE 60
           +E  SPV  L S++++L+I   Y++ + Q+D+   FLN +L+E IYM    G+   QG  
Sbjct: 164 IETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDS 223

Query: 61  ---QKVCKLQKSIDGLKHSFIAWNIRFDTAIKFYGFEQNADEPYVYKRIVNSIVAFLVLY 120
                VC L+KSI GLK +   W ++F   +  +GF Q+  +   + +I  ++   +++Y
Sbjct: 224 LPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVY 283

Query: 121 VDDILLIGND 127
           VDDI++  N+
Sbjct: 284 VDDIIICSNN 293

The following BLAST results are available for this feature:

BLAST of Cmc02g0045281 vs. NCBI nr


Match Name	E-value	Identity	Description
ADJ18449.1	7.8e-48	80.95	gag/pol protein, partial [Bryonia dioica]	[more]
KAA0045356.1	1.0e-47	79.37	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYK09500.1	4.3e-46	80.00	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYK15984.1	7.3e-46	77.95	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0025945.1	7.3e-46	77.95	gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumi...	[more]

BLAST of Cmc02g0045281 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	2.2e-21	44.53	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
Q94HW2	6.9e-15	33.60	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	6.9e-15	33.60	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P04146	1.9e-12	35.66	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P25600	8.2e-08	32.26	Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT...	[more]

BLAST of Cmc02g0045281 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
E2GK51	3.8e-48	80.95	Gag/pol protein (Fragment) OS=Bryonia dioica OX=3652 PE=4 SV=1	[more]
A0A5A7TTA2	4.9e-48	79.37	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G0013...	[more]
A0A5D3CDT9	2.1e-46	80.00	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold499G0010...	[more]
A0A5A7TZD0	3.5e-46	77.95	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G000...	[more]
A0A5D3CYF4	3.5e-46	77.95	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94G00111...	[more]

BLAST of Cmc02g0045281 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	8.3e-16	33.08	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 3..127 e-value: 7.4E-29 score: 101.0
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 2..123

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc02g0045281.1	Cmc02g0045281.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding