Cmc02g0044771 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc02g0044771
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	CMiso1.1chr02: 7989840 .. 7991183 (+)
RNA-Seq Expression	Cmc02g0044771
Synteny	Cmc02g0044771

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCACAACACAACCACTCATTCCAATCTTCAAAGGAGAAGGCTACGAGTTTTGGAGTATTCGTATGAAGACTCTTCTCATATCTCAAGACTTATGGGACTTAGTAGAACAAGGCTATACAGATCCTGACGACGAAGGCAAGTTGCAGGAGAACAGGGAGAAAGACCCAAAGGCATTGGTGATTGTTCAACAAGCAGTCCATGACAATGTTTTTTCGCGGATTGCTGCAGCAACAACGTCAAAACAAGCGTGGCTGATTTTGCAAAAGGCATTTCAAGGAGATTCAAGAGTACTCGTGGTTAAATTGCAATCACTTAAACGAGACTTTGAGACCTTGATGATGAAAAATGGAGAATCAATTGCTGATTTTTTGTCACGGGCAACGACAATTATTAGTCAGATGCAAACATACGGCGAGACGATTACGGATCAAACTATAGTGGAGAAAGTATTAAGAAGCTTGACTCCGAAGTTTGATCATGTTGTGGCTGCAATAGAAGAATCAAAGGATCTGTCCACTTTCACATTTATTGAATTAATGGGATCTCTTCAAGCACATGAGTCGAGAATCAATATATCGATGGAAAAAAACAAAGAAAAAGCGTTTAAGGTAAAGGATGTAGTTCCAAAGTATAATGACAGTGATTGTGTGATGACTCAAGGCCAAGGAAGTGGAGGATATCGTAGTCGAGGTCGTGGTACCGGAAAAGGATGTAACCAAAATGAAGAACAAAGGCAGTTCGGAGTGCAATCAAGCAACAAAGCTAATATTCAATGCTACCATTGCAAGAAGTTTGGTCATGTAAAGGCAGACTGTTGGTACAAAAATCAGAGAGCCAATTTCACAGAACAAAATGAAGCATCTGAGAATAATGGAAAGGGTGAAAATAAGCTTTTTATGATAAACATACCCAGTGATCAAAAGACAACGGAGGTGTGGTTCATTGATAGCGGTCATTTGAATCACATGACAGGTTTGAAGCCTGTATTCAAGGAGCTTAACGAAGGAGAAAAGTTGAAGGTGGAGCTCGGAAACAGCAAGGAGCTACAAGTAGAAGGCAAAAGAATGATGGGAATTGAAACTCACAATGGAAATAGAATTCTCACAAATGTTCAGTATGTGCCCGATATTGGATATAATTTGCTGAGTGTTGGACAACTAATGGAGAGTGGGCATTCTATCTTGTTTGATGATGGTGCGTGCCTGATAAAAAATAAGCAAACAGGACGAGTTTTGGCGAAAGTAAAGATGACCCAAAGGAAGTTTCAAATGTGGAAAATTTTGCTCTTACTGCTACTGCAACTAATACAACAAAGAACAACTCGGAGTTATGGCATTTAA

mRNA sequence

ATGGGCACAACACAACCACTCATTCCAATCTTCAAAGGAGAAGGCTACGAGTTTTGGAGTATTCGTATGAAGACTCTTCTCATATCTCAAGACTTATGGGACTTAGTAGAACAAGGCTATACAGATCCTGACGACGAAGGCAAGTTGCAGGAGAACAGGGAGAAAGACCCAAAGGCATTGGTGATTGTTCAACAAGCAGTCCATGACAATGTTTTTTCGCGGATTGCTGCAGCAACAACGTCAAAACAAGCGTGGCTGATTTTGCAAAAGGCATTTCAAGGAGATTCAAGAGTACTCGTGGTTAAATTGCAATCACTTAAACGAGACTTTGAGACCTTGATGATGAAAAATGGAGAATCAATTGCTGATTTTTTGTCACGGGCAACGACAATTATTAGTCAGATGCAAACATACGGCGAGACGATTACGGATCAAACTATAGTGGAGAAAGTATTAAGAAGCTTGACTCCGAAGTTTGATCATGTTGTGGCTGCAATAGAAGAATCAAAGGATCTGTCCACTTTCACATTTATTGAATTAATGGGATCTCTTCAAGCACATGAGTCGAGAATCAATATATCGATGGAAAAAAACAAAGAAAAAGCGTTTAAGGTAAAGGATGTAGTTCCAAAGTATAATGACAGTGATTGTGTGATGACTCAAGGCCAAGGAAGTGGAGGATATCGTAGTCGAGGTCGTGGTACCGGAAAAGGATGTAACCAAAATGAAGAACAAAGGCAGTTCGGAGTGCAATCAAGCAACAAAGCTAATATTCAATGCTACCATTGCAAGAAGTTTGGTCATGTAAAGGCAGACTGTTGGTACAAAAATCAGAGAGCCAATTTCACAGAACAAAATGAAGCATCTGAGAATAATGGAAAGGGTGAAAATAAGCTTTTTATGATAAACATACCCAGTGATCAAAAGACAACGGAGGTGTGGTTCATTGATAGCGGTCATTTGAATCACATGACAGGTTTGAAGCCTGTATTCAAGGAGCTTAACGAAGGAGAAAAGTTGAAGGTGGAGCTCGGAAACAGCAAGGAGCTACAAGTAGAAGGCAAAAGAATGATGGGAATTGAAACTCACAATGGAAATAGAATTCTCACAAATGTTCAGTATGTGCCCGATATTGGATATAATTTGCTGAGTGTTGGACAACTAATGGAGAGTGGGCATTCTATCTTGTTTGATGATGGTGCGTGCCTGATAAAAAATAAGCAAACAGGACGAGTTTTGGCGAAAGTAAAGATGACCCAAAGGAAGTTTCAAATGTGGAAAATTTTGCTCTTACTGCTACTGCAACTAATACAACAAAGAACAACTCGGAGTTATGGCATTTAA

Coding sequence (CDS)

ATGGGCACAACACAACCACTCATTCCAATCTTCAAAGGAGAAGGCTACGAGTTTTGGAGTATTCGTATGAAGACTCTTCTCATATCTCAAGACTTATGGGACTTAGTAGAACAAGGCTATACAGATCCTGACGACGAAGGCAAGTTGCAGGAGAACAGGGAGAAAGACCCAAAGGCATTGGTGATTGTTCAACAAGCAGTCCATGACAATGTTTTTTCGCGGATTGCTGCAGCAACAACGTCAAAACAAGCGTGGCTGATTTTGCAAAAGGCATTTCAAGGAGATTCAAGAGTACTCGTGGTTAAATTGCAATCACTTAAACGAGACTTTGAGACCTTGATGATGAAAAATGGAGAATCAATTGCTGATTTTTTGTCACGGGCAACGACAATTATTAGTCAGATGCAAACATACGGCGAGACGATTACGGATCAAACTATAGTGGAGAAAGTATTAAGAAGCTTGACTCCGAAGTTTGATCATGTTGTGGCTGCAATAGAAGAATCAAAGGATCTGTCCACTTTCACATTTATTGAATTAATGGGATCTCTTCAAGCACATGAGTCGAGAATCAATATATCGATGGAAAAAAACAAAGAAAAAGCGTTTAAGGTAAAGGATGTAGTTCCAAAGTATAATGACAGTGATTGTGTGATGACTCAAGGCCAAGGAAGTGGAGGATATCGTAGTCGAGGTCGTGGTACCGGAAAAGGATGTAACCAAAATGAAGAACAAAGGCAGTTCGGAGTGCAATCAAGCAACAAAGCTAATATTCAATGCTACCATTGCAAGAAGTTTGGTCATGTAAAGGCAGACTGTTGGTACAAAAATCAGAGAGCCAATTTCACAGAACAAAATGAAGCATCTGAGAATAATGGAAAGGGTGAAAATAAGCTTTTTATGATAAACATACCCAGTGATCAAAAGACAACGGAGGTGTGGTTCATTGATAGCGGTCATTTGAATCACATGACAGGTTTGAAGCCTGTATTCAAGGAGCTTAACGAAGGAGAAAAGTTGAAGGTGGAGCTCGGAAACAGCAAGGAGCTACAAGTAGAAGGCAAAAGAATGATGGGAATTGAAACTCACAATGGAAATAGAATTCTCACAAATGTTCAGTATGTGCCCGATATTGGATATAATTTGCTGAGTGTTGGACAACTAATGGAGAGTGGGCATTCTATCTTGTTTGATGATGGTGCGTGCCTGATAAAAAATAAGCAAACAGGACGAGTTTTGGCGAAAGTAAAGATGACCCAAAGGAAGTTTCAAATGTGGAAAATTTTGCTCTTACTGCTACTGCAACTAATACAACAAAGAACAACTCGGAGTTATGGCATTTAA

Protein sequence

MGTTQPLIPIFKGEGYEFWSIRMKTLLISQDLWDLVEQGYTDPDDEGKLQENREKDPKALVIVQQAVHDNVFSRIAAATTSKQAWLILQKAFQGDSRVLVVKLQSLKRDFETLMMKNGESIADFLSRATTIISQMQTYGETITDQTIVEKVLRSLTPKFDHVVAAIEESKDLSTFTFIELMGSLQAHESRINISMEKNKEKAFKVKDVVPKYNDSDCVMTQGQGSGGYRSRGRGTGKGCNQNEEQRQFGVQSSNKANIQCYHCKKFGHVKADCWYKNQRANFTEQNEASENNGKGENKLFMINIPSDQKTTEVWFIDSGHLNHMTGLKPVFKELNEGEKLKVELGNSKELQVEGKRMMGIETHNGNRILTNVQYVPDIGYNLLSVGQLMESGHSILFDDGACLIKNKQTGRVLAKVKMTQRKFQMWKILLLLLLQLIQQRTTRSYGI

Homology

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BLAST of Cmc02g0044771 vs. NCBI nr
Match: TYK28117.1 (putative gag-pol polyprotein, identical [Cucumis melo var. makuwa])

HSP 1 Score: 751.1 bits (1938), Expect = 5.4e-213
Identity = 383/422 (90.76%), Postives = 385/422 (91.23%), Query Frame = 0


Query: 1   MGTTQPLIPIFKGEGYEFWSIRMKTLLISQDLWDLVEQGYTDPDDEGKLQENREKDPKAL 60
           MGT QPLIPIFKGEGYEFWSIRMKTLLISQDLWDLVEQGYTDPDDEGKLQENREKD KAL
Sbjct: 8   MGTAQPLIPIFKGEGYEFWSIRMKTLLISQDLWDLVEQGYTDPDDEGKLQENREKDSKAL 67

Query: 61  VIVQQAVHDNVFSRIAAATTSKQAWLILQKAFQGDSRVLVVKLQSLKRDFETLMMKNGES 120
           VI+QQAVHDNVFSRIAAATT                           RDFETLMMKNGES
Sbjct: 68  VIIQQAVHDNVFSRIAAATT---------------------------RDFETLMMKNGES 127

Query: 121 IADFLSRATTIISQMQTYGETITDQTIVEKVLRSLTPKFDHVVAAIEESKDLSTFTFIEL 180
           IADFLSRATTIISQMQTYGETITDQTIVEKVLRSLTPKFDHVV AIEESKDLSTFTFIEL
Sbjct: 128 IADFLSRATTIISQMQTYGETITDQTIVEKVLRSLTPKFDHVVVAIEESKDLSTFTFIEL 187

Query: 181 MGSLQAHESRINISMEKNKEKAFKVKDVVPKYNDSDCVMTQGQGSGGYRSRGRGTGKGCN 240
           MGSLQAHESRINISMEKN+EKAFKVKDVVPKYNDSDCVMTQGQGSGGYRSRGRGTGKGCN
Sbjct: 188 MGSLQAHESRINISMEKNEEKAFKVKDVVPKYNDSDCVMTQGQGSGGYRSRGRGTGKGCN 247

Query: 241 QNEEQRQFGVQSSNKANIQCYHCKKFGHVKADCWYKNQRANFTEQNEASENNGKGENKLF 300
           QNEEQRQFGVQSSNKANIQCYHCKKFGHVKADCWYKN RANFTEQNEASENNG GENKLF
Sbjct: 248 QNEEQRQFGVQSSNKANIQCYHCKKFGHVKADCWYKNHRANFTEQNEASENNGNGENKLF 307

Query: 301 MINIPSDQKTTEVWFIDSGHLNHMTGLKPVFKELNEGEKLKVELGNSKELQVEGKRMMGI 360
           M NIPSDQKTTEVWFIDSGHLNHMT LKPVFKELNEGEKLKVELGN KELQVEGKR MGI
Sbjct: 308 MTNIPSDQKTTEVWFIDSGHLNHMTDLKPVFKELNEGEKLKVELGNGKELQVEGKRTMGI 367

Query: 361 ETHNGNRILTNVQYVPDIGYNLLSVGQLMESGHSILFDDGACLIKNKQTGRVLAKVKMTQ 420
           ETHNGNRILTNVQYVPDIGYNLLSVGQLMESGHSILFDDGACLIKNKQTGRVLAKVKMTQ
Sbjct: 368 ETHNGNRILTNVQYVPDIGYNLLSVGQLMESGHSILFDDGACLIKNKQTGRVLAKVKMTQ 402

Query: 421 RK 423
            K
Sbjct: 428 SK 402

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BLAST of Cmc02g0044771 vs. NCBI nr
Match: KAA0055915.1 (copia protein [Cucumis melo var. makuwa])

HSP 1 Score: 741.1 bits (1912), Expect = 5.6e-210
Identity = 373/373 (100.00%), Postives = 373/373 (100.00%), Query Frame = 0


Query: 1   MGTTQPLIPIFKGEGYEFWSIRMKTLLISQDLWDLVEQGYTDPDDEGKLQENREKDPKAL 60
           MGTTQPLIPIFKGEGYEFWSIRMKTLLISQDLWDLVEQGYTDPDDEGKLQENREKDPKAL
Sbjct: 8   MGTTQPLIPIFKGEGYEFWSIRMKTLLISQDLWDLVEQGYTDPDDEGKLQENREKDPKAL 67

Query: 61  VIVQQAVHDNVFSRIAAATTSKQAWLILQKAFQGDSRVLVVKLQSLKRDFETLMMKNGES 120
           VIVQQAVHDNVFSRIAAATTSKQAWLILQKAFQGDSRVLVVKLQSLKRDFETLMMKNGES
Sbjct: 68  VIVQQAVHDNVFSRIAAATTSKQAWLILQKAFQGDSRVLVVKLQSLKRDFETLMMKNGES 127

Query: 121 IADFLSRATTIISQMQTYGETITDQTIVEKVLRSLTPKFDHVVAAIEESKDLSTFTFIEL 180
           IADFLSRATTIISQMQTYGETITDQTIVEKVLRSLTPKFDHVVAAIEESKDLSTFTFIEL
Sbjct: 128 IADFLSRATTIISQMQTYGETITDQTIVEKVLRSLTPKFDHVVAAIEESKDLSTFTFIEL 187

Query: 181 MGSLQAHESRINISMEKNKEKAFKVKDVVPKYNDSDCVMTQGQGSGGYRSRGRGTGKGCN 240
           MGSLQAHESRINISMEKNKEKAFKVKDVVPKYNDSDCVMTQGQGSGGYRSRGRGTGKGCN
Sbjct: 188 MGSLQAHESRINISMEKNKEKAFKVKDVVPKYNDSDCVMTQGQGSGGYRSRGRGTGKGCN 247

Query: 241 QNEEQRQFGVQSSNKANIQCYHCKKFGHVKADCWYKNQRANFTEQNEASENNGKGENKLF 300
           QNEEQRQFGVQSSNKANIQCYHCKKFGHVKADCWYKNQRANFTEQNEASENNGKGENKLF
Sbjct: 248 QNEEQRQFGVQSSNKANIQCYHCKKFGHVKADCWYKNQRANFTEQNEASENNGKGENKLF 307

Query: 301 MINIPSDQKTTEVWFIDSGHLNHMTGLKPVFKELNEGEKLKVELGNSKELQVEGKRMMGI 360
           MINIPSDQKTTEVWFIDSGHLNHMTGLKPVFKELNEGEKLKVELGNSKELQVEGKRMMGI
Sbjct: 308 MINIPSDQKTTEVWFIDSGHLNHMTGLKPVFKELNEGEKLKVELGNSKELQVEGKRMMGI 367

Query: 361 ETHNGNRILTNVQ 374
           ETHNGNRILTNVQ
Sbjct: 368 ETHNGNRILTNVQ 380

[Close]

BLAST of Cmc02g0044771 vs. NCBI nr
Match: TYK27735.1 (putative gag-pol polyprotein, identical [Cucumis melo var. makuwa])

HSP 1 Score: 688.7 bits (1776), Expect = 3.3e-194
Identity = 351/400 (87.75%), Postives = 371/400 (92.75%), Query Frame = 0


Query: 23  MKTLLISQDLWDLVEQGYTDPDDEGKLQENREKDPKALVIVQQAVHDNVFSRIAAATTSK 82
           +KTLL SQDLWDLVEQGY DPDDEGKL+ENR+KD KALVI+QQAVHD+VFSRIA ATTSK
Sbjct: 117 VKTLLRSQDLWDLVEQGYVDPDDEGKLRENRKKDSKALVIIQQAVHDSVFSRIATATTSK 176

Query: 83  QAWLILQKAFQGDSRVLVVKLQSLKRDFETLMMKNGESIADFLSRATTIISQMQTYGETI 142
           QAWLILQKAFQGDSRVL+VKLQSL+RDFETLMMKNGESIADFLSRATTIISQMQTYGETI
Sbjct: 177 QAWLILQKAFQGDSRVLMVKLQSLRRDFETLMMKNGESIADFLSRATTIISQMQTYGETI 236

Query: 143 TDQTIVEKVLRSLTPKFDHVVAAIEESKDLSTFTFIELMGSLQAHESRINISMEKNKEKA 202
            DQTIVEKVLRSLTPKFDHVVAAIEESK+L TFTFIELMGSL+AHESRIN SME+N+EKA
Sbjct: 237 KDQTIVEKVLRSLTPKFDHVVAAIEESKNLFTFTFIELMGSLEAHESRINRSMERNEEKA 296

Query: 203 FKVKDVVPKYNDSDCVMTQGQGSGGYRSRGRGTGKGCNQNEEQRQFGVQSSNKANIQCYH 262
           F+VKD VPKYNDSD VMT+G+G GGYR RG GT KGCN+NE QRQFGVQSSNKANIQCYH
Sbjct: 297 FQVKDAVPKYNDSDRVMTRGRGRGGYRGRGHGTEKGCNRNEAQRQFGVQSSNKANIQCYH 356

Query: 263 CKKFGHVKADCWYKNQRANFTEQNEASENNGKGENKLFMINIPSDQKTTEVWFIDSGHLN 322
           CKKFGHVKADCWYKNQRANF  +NEASENNG  ENKLFM NIPSDQKT EVWFIDS   N
Sbjct: 357 CKKFGHVKADCWYKNQRANFAAENEASENNGNCENKLFMTNIPSDQKTAEVWFIDSSCSN 416

Query: 323 HMTGLKPVFKELNEGEKLKVELGNSKELQVEGKRMMGIETHNGNRILTNVQYVPDIGYNL 382
           HMTGLKPVFKELNEGEKLKV+L N KELQVEGK  + IETH+GNRILTNVQYVPDIGYNL
Sbjct: 417 HMTGLKPVFKELNEGEKLKVKLRNGKELQVEGKGTVVIETHHGNRILTNVQYVPDIGYNL 476

Query: 383 LSVGQLMESGHSILFDDGACLIKNKQTGRVLAKVKMTQRK 423
           LSVGQLMESG+SILFDDGACLIKNKQTGRVLAKVKMTQ K
Sbjct: 477 LSVGQLMESGYSILFDDGACLIKNKQTGRVLAKVKMTQSK 516

[Close]

BLAST of Cmc02g0044771 vs. NCBI nr
Match: KAE8650579.1 (hypothetical protein Csa_010963 [Cucumis sativus])

HSP 1 Score: 610.9 bits (1574), Expect = 8.7e-171
Identity = 321/409 (78.48%), Postives = 343/409 (83.86%), Query Frame = 0


Query: 1   MGTTQPLIPIFKGEGYEFWSIRMKTLLISQDLWDLVEQGYTDPDDEGKLQENREKDPKAL 60
           MGTTQPLI IFKGEGYEFWS+RMKTLL SQDLWDLVE  Y DPDDEGKL+E R KD KAL
Sbjct: 8   MGTTQPLILIFKGEGYEFWSMRMKTLLRSQDLWDLVEHNYADPDDEGKLREKRRKDSKAL 67

Query: 61  VIVQQAVHDNVFSRIAAATTSKQAWLILQKAFQGDSRVLVVKLQSLKRDFETLMMKNGES 120
           VI+QQAVHD+ FSRI   TTSK+AWLILQKAF+GD RVLVVKLQSL+++FETLMMKN ES
Sbjct: 68  VIIQQAVHDSGFSRIGTTTTSKEAWLILQKAFRGDLRVLVVKLQSLRKEFETLMMKNRES 127

Query: 121 IADFLSRATTIISQMQTYGETITDQTIVEKVLRSLTPKFDHVVAAIEESKDLSTFTFIEL 180
           IA+FLSRATTIISQMQTYGETITDQTIVEKVLRSLT KFD VVAAIEESKDLSTFTFIEL
Sbjct: 128 IANFLSRATTIISQMQTYGETITDQTIVEKVLRSLTLKFDQVVAAIEESKDLSTFTFIEL 187

Query: 181 MGSLQAHESRINISMEKNKEKAFKVKDVVPKYNDSDCVMTQGQGSGGYRSRGRGTGKGCN 240
           MGSLQAHESRIN SME+N+EKAF+VKDVVPKYN+SD VMT+G+G GGYR +GRGT KGC 
Sbjct: 188 MGSLQAHESRINRSMERNEEKAFQVKDVVPKYNNSDRVMTRGRGRGGYRGQGRGTEKGCK 247

Query: 241 QNEEQRQFGVQSSNKANIQCYHCKKFGHVKADCWYKNQRANFTEQNEASENNGKGENKLF 300
           QNEE+ QF VQSSNKANIQCYH KKFGHVKADC                           
Sbjct: 248 QNEEKGQFRVQSSNKANIQCYHGKKFGHVKADC--------------------------- 307

Query: 301 MINIPSDQKTTEVWFIDSGHLNHMTGLKPVFKELNEGEKLKVELGNSKELQVEGKRMMGI 360
                 DQKT EV FIDSG  NHMTGLKP+F ELNEGEKLKVELGN+KELQVE K  +GI
Sbjct: 308 -----CDQKTAEVCFIDSGCSNHMTGLKPIFNELNEGEKLKVELGNNKELQVERKGTVGI 367

Query: 361 ETHNGNRILTNVQYVPDIGYNLLSVGQLMESGHSILFDDGACLIKNKQT 410
           ETH+GNRILTNVQYVPDIGYNLLSVGQLMESGHSILFDDGACLIKNKQT
Sbjct: 368 ETHHGNRILTNVQYVPDIGYNLLSVGQLMESGHSILFDDGACLIKNKQT 384

[Close]

BLAST of Cmc02g0044771 vs. NCBI nr
Match: KAA8538296.1 (hypothetical protein F0562_027881 [Nyssa sinensis])

HSP 1 Score: 545.0 bits (1403), Expect = 5.9e-151
Identity = 276/441 (62.59%), Postives = 355/441 (80.50%), Query Frame = 0


Query: 1   MGTTQPLIPIFKGEGYEFWSIRMKTLLISQDLWDLVEQGYTDPDDEGKLQENREKDPKAL 60
           M   QPLI +FKGEGY FWSIRM TL  SQ+LWDLVEQGY DPD+E +L+EN++KD KAL
Sbjct: 8   MSAAQPLILVFKGEGYGFWSIRMMTLFKSQELWDLVEQGYADPDEETRLKENKKKDSKAL 67

Query: 61  VIVQQAVHDNVFSRIAAATTSKQAWLILQKAFQGDSRVLVVKLQSLKRDFETLMMKNGES 120
           +I+QQAVHD++FSRIAAATTSKQAW  LQK FQGDS+V+VVKLQSL+RDFETL MK+GES
Sbjct: 68  MIIQQAVHDSIFSRIAAATTSKQAWSTLQKEFQGDSKVIVVKLQSLRRDFETLYMKSGES 127

Query: 121 IADFLSRATTIISQMQTYGETITDQTIVEKVLRSLTPKFDHVVAAIEESKDLSTFTFIEL 180
           IADFLSR TTI+SQM++YGE I+D+T+V KVLRSLTPKFDHVVAAIEESKDLS F+F EL
Sbjct: 128 IADFLSRVTTIVSQMRSYGEKISDETVVAKVLRSLTPKFDHVVAAIEESKDLSVFSFDEL 187

Query: 181 MGSLQAHESRINISMEKNKEKAFKVKDVVPKYNDSDCVMTQGQGSGGYRSRGRGTGKGCN 240
           MGSLQAHE+RI+ S+E+N+EKAF+VKD+V K  +SD  +++G+G GG+R RGRG G+G  
Sbjct: 188 MGSLQAHETRIDRSLEQNEEKAFQVKDIVTKAAESDSSISRGRGRGGFRGRGRGRGRGNG 247

Query: 241 QN----EEQRQFGVQSSNKANIQCYHCKKFGHVKADCWYKNQRANFTEQNEASENNGKGE 300
           +     + QRQ G Q +NK  +QCYHCKK+G++KADCWYK+Q+ N+  +      NG+  
Sbjct: 248 RGRGRFDGQRQSGEQRNNKNGVQCYHCKKYGYIKADCWYKDQQVNYAAE------NGEES 307

Query: 301 NKLFMINIPSDQKTTEVWFIDSGHLNHMTGLKPVFKELNEGEKLKVELGNSKELQVEGKR 360
           +KLFMI+   + K+++VWF+DSG  NHMTG+K +FKEL+E +KLKV+LGN+KE+QVEGK 
Sbjct: 308 SKLFMIHFDPNNKSSDVWFVDSGCSNHMTGMKSLFKELDEMQKLKVQLGNAKEMQVEGKG 367

Query: 361 MMGIETHNGN-RILTNVQYVPDIGYNLLSVGQLMESGHSILFDDGACLIKNKQTGRVL-- 420
            +GIET +GN ++L NVQ+VPD+GYNLLSVGQLM +G+SILFD+ AC+IK+K  G     
Sbjct: 368 TVGIETTHGNVKLLYNVQFVPDLGYNLLSVGQLMAAGYSILFDNDACVIKDKHLGHTFLC 427

Query: 421 ----AKVKMTQRKFQMWKILL 431
                ++K+  +  Q+  +LL
Sbjct: 428 PLESLQMKVKSQLLQVHPVLL 442

[Close]

BLAST of Cmc02g0044771 vs. ExPASy TrEMBL
Match: A0A5D3DWC7 (Putative gag-pol polyprotein, identical OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold289G00230 PE=4 SV=1)

HSP 1 Score: 751.1 bits (1938), Expect = 2.6e-213
Identity = 383/422 (90.76%), Postives = 385/422 (91.23%), Query Frame = 0


Query: 1   MGTTQPLIPIFKGEGYEFWSIRMKTLLISQDLWDLVEQGYTDPDDEGKLQENREKDPKAL 60
           MGT QPLIPIFKGEGYEFWSIRMKTLLISQDLWDLVEQGYTDPDDEGKLQENREKD KAL
Sbjct: 8   MGTAQPLIPIFKGEGYEFWSIRMKTLLISQDLWDLVEQGYTDPDDEGKLQENREKDSKAL 67

Query: 61  VIVQQAVHDNVFSRIAAATTSKQAWLILQKAFQGDSRVLVVKLQSLKRDFETLMMKNGES 120
           VI+QQAVHDNVFSRIAAATT                           RDFETLMMKNGES
Sbjct: 68  VIIQQAVHDNVFSRIAAATT---------------------------RDFETLMMKNGES 127

Query: 121 IADFLSRATTIISQMQTYGETITDQTIVEKVLRSLTPKFDHVVAAIEESKDLSTFTFIEL 180
           IADFLSRATTIISQMQTYGETITDQTIVEKVLRSLTPKFDHVV AIEESKDLSTFTFIEL
Sbjct: 128 IADFLSRATTIISQMQTYGETITDQTIVEKVLRSLTPKFDHVVVAIEESKDLSTFTFIEL 187

Query: 181 MGSLQAHESRINISMEKNKEKAFKVKDVVPKYNDSDCVMTQGQGSGGYRSRGRGTGKGCN 240
           MGSLQAHESRINISMEKN+EKAFKVKDVVPKYNDSDCVMTQGQGSGGYRSRGRGTGKGCN
Sbjct: 188 MGSLQAHESRINISMEKNEEKAFKVKDVVPKYNDSDCVMTQGQGSGGYRSRGRGTGKGCN 247

Query: 241 QNEEQRQFGVQSSNKANIQCYHCKKFGHVKADCWYKNQRANFTEQNEASENNGKGENKLF 300
           QNEEQRQFGVQSSNKANIQCYHCKKFGHVKADCWYKN RANFTEQNEASENNG GENKLF
Sbjct: 248 QNEEQRQFGVQSSNKANIQCYHCKKFGHVKADCWYKNHRANFTEQNEASENNGNGENKLF 307

Query: 301 MINIPSDQKTTEVWFIDSGHLNHMTGLKPVFKELNEGEKLKVELGNSKELQVEGKRMMGI 360
           M NIPSDQKTTEVWFIDSGHLNHMT LKPVFKELNEGEKLKVELGN KELQVEGKR MGI
Sbjct: 308 MTNIPSDQKTTEVWFIDSGHLNHMTDLKPVFKELNEGEKLKVELGNGKELQVEGKRTMGI 367

Query: 361 ETHNGNRILTNVQYVPDIGYNLLSVGQLMESGHSILFDDGACLIKNKQTGRVLAKVKMTQ 420
           ETHNGNRILTNVQYVPDIGYNLLSVGQLMESGHSILFDDGACLIKNKQTGRVLAKVKMTQ
Sbjct: 368 ETHNGNRILTNVQYVPDIGYNLLSVGQLMESGHSILFDDGACLIKNKQTGRVLAKVKMTQ 402

Query: 421 RK 423
            K
Sbjct: 428 SK 402

[Close]

BLAST of Cmc02g0044771 vs. ExPASy TrEMBL
Match: A0A5A7UQM0 (Copia protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold319G00340 PE=4 SV=1)

HSP 1 Score: 741.1 bits (1912), Expect = 2.7e-210
Identity = 373/373 (100.00%), Postives = 373/373 (100.00%), Query Frame = 0


Query: 1   MGTTQPLIPIFKGEGYEFWSIRMKTLLISQDLWDLVEQGYTDPDDEGKLQENREKDPKAL 60
           MGTTQPLIPIFKGEGYEFWSIRMKTLLISQDLWDLVEQGYTDPDDEGKLQENREKDPKAL
Sbjct: 8   MGTTQPLIPIFKGEGYEFWSIRMKTLLISQDLWDLVEQGYTDPDDEGKLQENREKDPKAL 67

Query: 61  VIVQQAVHDNVFSRIAAATTSKQAWLILQKAFQGDSRVLVVKLQSLKRDFETLMMKNGES 120
           VIVQQAVHDNVFSRIAAATTSKQAWLILQKAFQGDSRVLVVKLQSLKRDFETLMMKNGES
Sbjct: 68  VIVQQAVHDNVFSRIAAATTSKQAWLILQKAFQGDSRVLVVKLQSLKRDFETLMMKNGES 127

Query: 121 IADFLSRATTIISQMQTYGETITDQTIVEKVLRSLTPKFDHVVAAIEESKDLSTFTFIEL 180
           IADFLSRATTIISQMQTYGETITDQTIVEKVLRSLTPKFDHVVAAIEESKDLSTFTFIEL
Sbjct: 128 IADFLSRATTIISQMQTYGETITDQTIVEKVLRSLTPKFDHVVAAIEESKDLSTFTFIEL 187

Query: 181 MGSLQAHESRINISMEKNKEKAFKVKDVVPKYNDSDCVMTQGQGSGGYRSRGRGTGKGCN 240
           MGSLQAHESRINISMEKNKEKAFKVKDVVPKYNDSDCVMTQGQGSGGYRSRGRGTGKGCN
Sbjct: 188 MGSLQAHESRINISMEKNKEKAFKVKDVVPKYNDSDCVMTQGQGSGGYRSRGRGTGKGCN 247

Query: 241 QNEEQRQFGVQSSNKANIQCYHCKKFGHVKADCWYKNQRANFTEQNEASENNGKGENKLF 300
           QNEEQRQFGVQSSNKANIQCYHCKKFGHVKADCWYKNQRANFTEQNEASENNGKGENKLF
Sbjct: 248 QNEEQRQFGVQSSNKANIQCYHCKKFGHVKADCWYKNQRANFTEQNEASENNGKGENKLF 307

Query: 301 MINIPSDQKTTEVWFIDSGHLNHMTGLKPVFKELNEGEKLKVELGNSKELQVEGKRMMGI 360
           MINIPSDQKTTEVWFIDSGHLNHMTGLKPVFKELNEGEKLKVELGNSKELQVEGKRMMGI
Sbjct: 308 MINIPSDQKTTEVWFIDSGHLNHMTGLKPVFKELNEGEKLKVELGNSKELQVEGKRMMGI 367

Query: 361 ETHNGNRILTNVQ 374
           ETHNGNRILTNVQ
Sbjct: 368 ETHNGNRILTNVQ 380

[Close]

BLAST of Cmc02g0044771 vs. ExPASy TrEMBL
Match: A0A5D3DWP2 (Putative gag-pol polyprotein, identical OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold225G00850 PE=4 SV=1)

HSP 1 Score: 688.7 bits (1776), Expect = 1.6e-194
Identity = 351/400 (87.75%), Postives = 371/400 (92.75%), Query Frame = 0


Query: 23  MKTLLISQDLWDLVEQGYTDPDDEGKLQENREKDPKALVIVQQAVHDNVFSRIAAATTSK 82
           +KTLL SQDLWDLVEQGY DPDDEGKL+ENR+KD KALVI+QQAVHD+VFSRIA ATTSK
Sbjct: 117 VKTLLRSQDLWDLVEQGYVDPDDEGKLRENRKKDSKALVIIQQAVHDSVFSRIATATTSK 176

Query: 83  QAWLILQKAFQGDSRVLVVKLQSLKRDFETLMMKNGESIADFLSRATTIISQMQTYGETI 142
           QAWLILQKAFQGDSRVL+VKLQSL+RDFETLMMKNGESIADFLSRATTIISQMQTYGETI
Sbjct: 177 QAWLILQKAFQGDSRVLMVKLQSLRRDFETLMMKNGESIADFLSRATTIISQMQTYGETI 236

Query: 143 TDQTIVEKVLRSLTPKFDHVVAAIEESKDLSTFTFIELMGSLQAHESRINISMEKNKEKA 202
            DQTIVEKVLRSLTPKFDHVVAAIEESK+L TFTFIELMGSL+AHESRIN SME+N+EKA
Sbjct: 237 KDQTIVEKVLRSLTPKFDHVVAAIEESKNLFTFTFIELMGSLEAHESRINRSMERNEEKA 296

Query: 203 FKVKDVVPKYNDSDCVMTQGQGSGGYRSRGRGTGKGCNQNEEQRQFGVQSSNKANIQCYH 262
           F+VKD VPKYNDSD VMT+G+G GGYR RG GT KGCN+NE QRQFGVQSSNKANIQCYH
Sbjct: 297 FQVKDAVPKYNDSDRVMTRGRGRGGYRGRGHGTEKGCNRNEAQRQFGVQSSNKANIQCYH 356

Query: 263 CKKFGHVKADCWYKNQRANFTEQNEASENNGKGENKLFMINIPSDQKTTEVWFIDSGHLN 322
           CKKFGHVKADCWYKNQRANF  +NEASENNG  ENKLFM NIPSDQKT EVWFIDS   N
Sbjct: 357 CKKFGHVKADCWYKNQRANFAAENEASENNGNCENKLFMTNIPSDQKTAEVWFIDSSCSN 416

Query: 323 HMTGLKPVFKELNEGEKLKVELGNSKELQVEGKRMMGIETHNGNRILTNVQYVPDIGYNL 382
           HMTGLKPVFKELNEGEKLKV+L N KELQVEGK  + IETH+GNRILTNVQYVPDIGYNL
Sbjct: 417 HMTGLKPVFKELNEGEKLKVKLRNGKELQVEGKGTVVIETHHGNRILTNVQYVPDIGYNL 476

Query: 383 LSVGQLMESGHSILFDDGACLIKNKQTGRVLAKVKMTQRK 423
           LSVGQLMESG+SILFDDGACLIKNKQTGRVLAKVKMTQ K
Sbjct: 477 LSVGQLMESGYSILFDDGACLIKNKQTGRVLAKVKMTQSK 516

[Close]

BLAST of Cmc02g0044771 vs. ExPASy TrEMBL
Match: A0A5J5B7G1 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_027881 PE=4 SV=1)

HSP 1 Score: 545.0 bits (1403), Expect = 2.8e-151
Identity = 276/441 (62.59%), Postives = 355/441 (80.50%), Query Frame = 0


Query: 1   MGTTQPLIPIFKGEGYEFWSIRMKTLLISQDLWDLVEQGYTDPDDEGKLQENREKDPKAL 60
           M   QPLI +FKGEGY FWSIRM TL  SQ+LWDLVEQGY DPD+E +L+EN++KD KAL
Sbjct: 8   MSAAQPLILVFKGEGYGFWSIRMMTLFKSQELWDLVEQGYADPDEETRLKENKKKDSKAL 67

Query: 61  VIVQQAVHDNVFSRIAAATTSKQAWLILQKAFQGDSRVLVVKLQSLKRDFETLMMKNGES 120
           +I+QQAVHD++FSRIAAATTSKQAW  LQK FQGDS+V+VVKLQSL+RDFETL MK+GES
Sbjct: 68  MIIQQAVHDSIFSRIAAATTSKQAWSTLQKEFQGDSKVIVVKLQSLRRDFETLYMKSGES 127

Query: 121 IADFLSRATTIISQMQTYGETITDQTIVEKVLRSLTPKFDHVVAAIEESKDLSTFTFIEL 180
           IADFLSR TTI+SQM++YGE I+D+T+V KVLRSLTPKFDHVVAAIEESKDLS F+F EL
Sbjct: 128 IADFLSRVTTIVSQMRSYGEKISDETVVAKVLRSLTPKFDHVVAAIEESKDLSVFSFDEL 187

Query: 181 MGSLQAHESRINISMEKNKEKAFKVKDVVPKYNDSDCVMTQGQGSGGYRSRGRGTGKGCN 240
           MGSLQAHE+RI+ S+E+N+EKAF+VKD+V K  +SD  +++G+G GG+R RGRG G+G  
Sbjct: 188 MGSLQAHETRIDRSLEQNEEKAFQVKDIVTKAAESDSSISRGRGRGGFRGRGRGRGRGNG 247

Query: 241 QN----EEQRQFGVQSSNKANIQCYHCKKFGHVKADCWYKNQRANFTEQNEASENNGKGE 300
           +     + QRQ G Q +NK  +QCYHCKK+G++KADCWYK+Q+ N+  +      NG+  
Sbjct: 248 RGRGRFDGQRQSGEQRNNKNGVQCYHCKKYGYIKADCWYKDQQVNYAAE------NGEES 307

Query: 301 NKLFMINIPSDQKTTEVWFIDSGHLNHMTGLKPVFKELNEGEKLKVELGNSKELQVEGKR 360
           +KLFMI+   + K+++VWF+DSG  NHMTG+K +FKEL+E +KLKV+LGN+KE+QVEGK 
Sbjct: 308 SKLFMIHFDPNNKSSDVWFVDSGCSNHMTGMKSLFKELDEMQKLKVQLGNAKEMQVEGKG 367

Query: 361 MMGIETHNGN-RILTNVQYVPDIGYNLLSVGQLMESGHSILFDDGACLIKNKQTGRVL-- 420
            +GIET +GN ++L NVQ+VPD+GYNLLSVGQLM +G+SILFD+ AC+IK+K  G     
Sbjct: 368 TVGIETTHGNVKLLYNVQFVPDLGYNLLSVGQLMAAGYSILFDNDACVIKDKHLGHTFLC 427

Query: 421 ----AKVKMTQRKFQMWKILL 431
                ++K+  +  Q+  +LL
Sbjct: 428 PLESLQMKVKSQLLQVHPVLL 442

[Close]

BLAST of Cmc02g0044771 vs. ExPASy TrEMBL
Match: A0A0V0IV83 (Putative ovule protein (Fragment) OS=Solanum chacoense OX=4108 PE=4 SV=1)

HSP 1 Score: 520.0 bits (1338), Expect = 9.8e-144
Identity = 262/427 (61.36%), Postives = 339/427 (79.39%), Query Frame = 0


Query: 1   MGTTQPLIPIFKGEGYEFWSIRMKTLLISQDLWDLVEQGYTDPDDEGKLQENREKDPKAL 60
           +   QPLIP+FKGE YEFWSIRMKT+L SQDLWDLVE+GYTDPD+E +L++N++KD KAL
Sbjct: 8   LSVAQPLIPVFKGESYEFWSIRMKTILKSQDLWDLVERGYTDPDEENRLRDNKKKDAKAL 67

Query: 61  VIVQQAVHDNVFSRIAAATTSKQAWLILQKAFQGDSRVLVVKLQSLKRDFETLMMKNGES 120
           V +QQAVHD++FSRIA ATTSKQAW ILQK FQGDS+V+VV+LQSL+RDFETLMMK+GES
Sbjct: 68  VFIQQAVHDSIFSRIAXATTSKQAWSILQKXFQGDSKVIVVRLQSLRRDFETLMMKSGES 127

Query: 121 IADFLSRATTIISQMQTYGETITDQTIVEKVLRSLTPKFDHVVAAIEESKDLSTFTFIEL 180
           IA FLSRA TI+SQ+++YGE +TDQ IVEKVLRSL PKFDHVVAAIEESKDLS F+F EL
Sbjct: 128 IASFLSRAMTIVSQIRSYGEKVTDQIIVEKVLRSLNPKFDHVVAAIEESKDLSVFSFDEL 187

Query: 181 MGSLQAHESRINISMEKNKEKAFKVKDVVPKYNDSDCVMTQGQGSGGYR-SRGRGTGKGC 240
           MGSLQAHE+R N S+EKN+EKAF+VKD   KY D++   ++G+G GG+R  RGRG G+G 
Sbjct: 188 MGSLQAHEARRNRSVEKNEEKAFQVKDATTKYGDNNGPASRGRGRGGFRGGRGRGFGRGR 247

Query: 241 NQNEEQRQFGVQSSNKANIQCYHCKKFGHVKADCWYKNQRANFTEQNEASENNGKGENKL 300
            +N   RQ   Q + K  +QC+HC ++GH+KADCW+K+Q+ NF     A+E N K EN L
Sbjct: 248 GRNNGHRQSNEQGNTKNGVQCHHCHRYGHIKADCWFKDQKMNF-----AAEENEK-ENYL 307

Query: 301 FMINIPSDQKTTEVWFIDSGHLNHMTGLKPVFKELNEGEKLKVELGNSKELQVEGKRMMG 360
           FM  I ++ K +++WF+DSG  NHMTG K +F++L+E +K KV+LGN+KE+QVEGK  + 
Sbjct: 308 FMACIDANHKPSDIWFVDSGCSNHMTGAKSMFRDLDEKQKKKVQLGNTKEMQVEGKGKVV 367

Query: 361 IET-HNGNRILTNVQYVPDIGYNLLSVGQLMESGHSILFDDGACLIKNKQTGRVLAKVKM 420
           ++T H+  ++L +VQ+VPD+G+NLLSVGQLM  G+S+LFDD A  I NK++G+ +   K 
Sbjct: 368 VDTSHDKVKMLDDVQFVPDLGFNLLSVGQLMADGYSLLFDDDAYXITNKKSGKKVHITKT 427

Query: 421 TQRKFQM 426
               F +
Sbjct: 428 PNNMFPL 428

[Close]

BLAST of Cmc02g0044771 vs. TAIR 10
Match: AT3G21000.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 80.5 bits (197), Expect = 3.8e-15
Identity = 96/427 (22.48%), Postives = 175/427 (40.98%), Query Frame = 0


Query: 16  YEFWSIRMKTLLISQDLWDLVEQGY-------------TDPDDEGKLQENREKDPKALVI 75
           YE W+   K+ LI Q LWD+V  G                P++  K ++   KD KAL I
Sbjct: 17  YEIWAPITKSTLIEQGLWDVVVNGVPQDPSKNPELAATIQPEELSKWRDFVVKDAKALQI 76

Query: 76  VQQAVHDNVFSRIAAATTSKQAWLILQKAFQGDS--RVLVVKLQSLKRDFETLMMKNGES 135
           +Q ++ D+VF +  +A+++K  W +L+K  +  +  R+  V ++ L++  E L M + ES
Sbjct: 77  LQSSLTDSVFRKTLSASSAKDVWDLLRKGNEQATIRRLEQVTIRRLEKQLEDLKMVDKES 136

Query: 136 IADFLSRATTIISQMQTYGETITDQTIVEKVLRSLTPKFDHVVAAIEESKDLSTFTFIEL 195
            + +L +A  I+ ++       +D  I + V  +L+  FD + + +EE  D+   T   L
Sbjct: 137 GSSYLDKALEILERLGRAKLEKSDYEICKNVFTTLSGSFDGLDSMLEELIDVHKMTSKSL 196

Query: 196 MGSL--QAHESRINISMEKNKEKAFKVKDVVPKYNDSDCVMTQGQGSGGYRSRGRGTGKG 255
           +     + HES                                                 
Sbjct: 197 VEYFYYRVHES------------------------------------------------- 256

Query: 256 CNQNEEQRQFG----VQSSNKANIQCYHCKKFGHVKADCWYKNQRANFTEQNEASENNGK 315
              + E+  FG    ++  +K+   C  C K  H + DC ++      T++ E  +    
Sbjct: 257 ---STEEAIFGLLKDLRLKSKSEKWCGLCYKNNHNQEDCKFRIH----TDKEEKEDEIVV 316

Query: 316 GENKLFMINIPSDQKTTEVWFIDSGHLNHMTGLKPVFKELNEGEKLKVELGNSKELQVEG 375
                 + N+ +     ++W I      +MT     F  L+   K  V   +   L VEG
Sbjct: 317 DYRLETVPNLGAKTYDDDIWIIHKMAPINMTPYVKYFTTLDRTFKATVGTVDGTVLLVEG 376

Query: 376 KRMMGIETHNG-NRILTNVQYVPDIGYNLLSVGQLMESGHSILFD-DGACLIKNKQTGRV 420
           K  + I    G  + + NV +VP +  N+LS G+++   +SI     G C++ ++   ++
Sbjct: 377 KGDVKIRMKEGKKKTIRNVIFVPGLNRNVLSFGKMVSKRYSISTGMQGECIVCDRGENKL 387

[Close]

BLAST of Cmc02g0044771 vs. TAIR 10
Match: AT1G48720.1 (unknown protein; Has 229 Blast hits to 229 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 228; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 68.6 bits (166), Expect = 1.5e-11
Identity = 27/83 (32.53%), Postives = 55/83 (66.27%), Query Frame = 0


Query: 8  IPIFKGEGYEFWSIRMKTLLISQDLWDLVEQGYTDPDDEGK--------LQENREKDPKA 67
          +P+     Y+ WS+RMK +L + D+W++VE+G+ +P++EG         L+++R++D KA
Sbjct: 10 VPVLTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKRDKKA 69

Query: 68 LVIVQQAVHDNVFSRIAAATTSK 83
          L ++ Q + ++ F ++  AT++K
Sbjct: 70 LCLIYQGLDEDTFEKVVEATSAK 92

[Close]

BLAST of Cmc02g0044771 vs. TAIR 10
Match: AT3G20980.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 58.2 bits (139), Expect = 2.0e-08
Identity = 39/117 (33.33%), Postives = 57/117 (48.72%), Query Frame = 0


Query: 313 VWFIDSGHLNHMTGLKPVFKELNEGEKLKVEL--GNSKE---LQVEGKRMMGIETHNGNR 372
           +W I S + NHMT     F  L+   K KV+   G+  E     VEG   +   T+ GN+
Sbjct: 268 IWLISSTNSNHMTPHVKFFTTLDRSRKCKVKFISGDKSETTVAMVEGIGDVTFITNEGNK 327

Query: 373 ILTNVQYVPDIGYNLLSVGQLMESGHSILFD-DGACLIKNKQTGRVLAKVKMTQRKF 424
            + NV YVP I  N LSV QL  +G  +  +    C + ++ TG++  K    +R F
Sbjct: 328 TIKNVLYVPGIEGNALSVSQLKRNGFEVSMERRTGCFVWDRTTGKMFGKNMWEKRGF 384

The following BLAST results are available for this feature:

BLAST of Cmc02g0044771 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK28117.1	5.4e-213	90.76	putative gag-pol polyprotein, identical [Cucumis melo var. makuwa]	[more]
KAA0055915.1	5.6e-210	100.00	copia protein [Cucumis melo var. makuwa]	[more]
TYK27735.1	3.3e-194	87.75	putative gag-pol polyprotein, identical [Cucumis melo var. makuwa]	[more]
KAE8650579.1	8.7e-171	78.48	hypothetical protein Csa_010963 [Cucumis sativus]	[more]
KAA8538296.1	5.9e-151	62.59	hypothetical protein F0562_027881 [Nyssa sinensis]	[more]

BLAST of Cmc02g0044771 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc02g0044771 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DWC7	2.6e-213	90.76	Putative gag-pol polyprotein, identical OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5A7UQM0	2.7e-210	100.00	Copia protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold319G00340 ...	[more]
A0A5D3DWP2	1.6e-194	87.75	Putative gag-pol polyprotein, identical OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5J5B7G1	2.8e-151	62.59	Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_027881 PE=4 SV=1	[more]
A0A0V0IV83	9.8e-144	61.36	Putative ovule protein (Fragment) OS=Solanum chacoense OX=4108 PE=4 SV=1	[more]

BLAST of Cmc02g0044771 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G21000.1	3.8e-15	22.48	Gag-Pol-related retrotransposon family protein	[more]
AT1G48720.1	1.5e-11	32.53	unknown protein; Has 229 Blast hits to 229 proteins in 10 species: Archae - 0; B...	[more]
AT3G20980.1	2.0e-08	33.33	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 54..190 e-value: 5.5E-25 score: 87.7
None	No IPR available	GENE3D	4.10.60.10		coord: 220..288 e-value: 3.2E-5 score: 25.7
None	No IPR available	PANTHER	PTHR34222	FAMILY NOT NAMED	coord: 22..355
None	No IPR available	PANTHER	PTHR34222:SF30	SUBFAMILY NOT NAMED	coord: 22..355
IPR025314	Domain of unknown function DUF4219	PFAM	PF13961	DUF4219	coord: 13..37 e-value: 2.0E-6 score: 27.4
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 260..273 score: 8.976924
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 251..276

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc02g0044771.1	Cmc02g0044771.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding