Cmc02g0044681 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc02g0044681
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Integrase
Location	CMiso1.1chr02: 7905353 .. 7906141 (-)
RNA-Seq Expression	Cmc02g0044681
Synteny	Cmc02g0044681

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGTTCCAACAAACAAACAAGCTCTTGGAGTAAAATGGGTGTACAGAACAAAGTTGAAGTCAGATGGTAATGTTGAAAAATACAAGGCAAGACTTGTTGTAAAAGGCTACAAGCAGGAATATGGTGTGGATTATGAAGACATATTTGCCCCTGTGACAAAAATTGAGACCATTCGATTGATTTTGTTATTAGCTGCTCAAAATGGATGGAAAGTTTATCAAATGGATGTAAAATCCGCTTTTTTGAATGGACACTTGAAGGAAGAGATATTTGTTGCACAACCTTTGGGCTATGTGCAAAGGGGAGAAGAAGAAAAAGTGTACAAGTTGAAAAAAGCCTTGTATGGATTGAAGCAAGCTCCGCGAGCTTGGTACAGTCGTATCGACAGTTTTTTTCTAAAGACAGGATTTCGAAGGTGTCCATATGAGCATGCACTCTATGTCAAAGAAGACAAGTATGGCAAATTTCTCATTGTTTCTCTTTACGTTGATGATTTACTTTTTACTAGAAATGATAAATTTTTGTGTGATGATTTTAAGAATTCCATGAAAAAGGAATTCGAGATGAGTGATATGGGTCTCATCCACTACTTTCTCGGAATTGAAGTTAATCAAAATGAAGGAGAAATTGTCATTTCACAACAAAAATATGCTCATGATTTACTAAAAAAATTTCGGATGGAAAATGCTTCACCTTGCAACACTCCCATGGATACAAATTTGAAATTGTGCAAGGATGATATTGGAGAAGCAGTCGATCCAAGTTTATATCGAAGCTTAGTTTGA

mRNA sequence

ATGGAGGTTCCAACAAACAAACAAGCTCTTGGAGTAAAATGGGTGTACAGAACAAAGTTGAAGTCAGATGGTAATGTTGAAAAATACAAGGCAAGACTTGTTGTAAAAGGCTACAAGCAGGAATATGGTGTGGATTATGAAGACATATTTGCCCCTGTGACAAAAATTGAGACCATTCGATTGATTTTGTTATTAGCTGCTCAAAATGGATGGAAAGTTTATCAAATGGATGTAAAATCCGCTTTTTTGAATGGACACTTGAAGGAAGAGATATTTGTTGCACAACCTTTGGGCTATGTGCAAAGGGGAGAAGAAGAAAAAGTGTACAAGTTGAAAAAAGCCTTGTATGGATTGAAGCAAGCTCCGCGAGCTTGGTACAGTCGTATCGACAGTTTTTTTCTAAAGACAGGATTTCGAAGGTGTCCATATGAGCATGCACTCTATGTCAAAGAAGACAAGTATGGCAAATTTCTCATTGTTTCTCTTTACGTTGATGATTTACTTTTTACTAGAAATGATAAATTTTTGTGTGATGATTTTAAGAATTCCATGAAAAAGGAATTCGAGATGAGTGATATGGGTCTCATCCACTACTTTCTCGGAATTGAAGTTAATCAAAATGAAGGAGAAATTGTCATTTCACAACAAAAATATGCTCATGATTTACTAAAAAAATTTCGGATGGAAAATGCTTCACCTTGCAACACTCCCATGGATACAAATTTGAAATTGTGCAAGGATGATATTGGAGAAGCAGTCGATCCAAGTTTATATCGAAGCTTAGTTTGA

Coding sequence (CDS)

ATGGAGGTTCCAACAAACAAACAAGCTCTTGGAGTAAAATGGGTGTACAGAACAAAGTTGAAGTCAGATGGTAATGTTGAAAAATACAAGGCAAGACTTGTTGTAAAAGGCTACAAGCAGGAATATGGTGTGGATTATGAAGACATATTTGCCCCTGTGACAAAAATTGAGACCATTCGATTGATTTTGTTATTAGCTGCTCAAAATGGATGGAAAGTTTATCAAATGGATGTAAAATCCGCTTTTTTGAATGGACACTTGAAGGAAGAGATATTTGTTGCACAACCTTTGGGCTATGTGCAAAGGGGAGAAGAAGAAAAAGTGTACAAGTTGAAAAAAGCCTTGTATGGATTGAAGCAAGCTCCGCGAGCTTGGTACAGTCGTATCGACAGTTTTTTTCTAAAGACAGGATTTCGAAGGTGTCCATATGAGCATGCACTCTATGTCAAAGAAGACAAGTATGGCAAATTTCTCATTGTTTCTCTTTACGTTGATGATTTACTTTTTACTAGAAATGATAAATTTTTGTGTGATGATTTTAAGAATTCCATGAAAAAGGAATTCGAGATGAGTGATATGGGTCTCATCCACTACTTTCTCGGAATTGAAGTTAATCAAAATGAAGGAGAAATTGTCATTTCACAACAAAAATATGCTCATGATTTACTAAAAAAATTTCGGATGGAAAATGCTTCACCTTGCAACACTCCCATGGATACAAATTTGAAATTGTGCAAGGATGATATTGGAGAAGCAGTCGATCCAAGTTTATATCGAAGCTTAGTTTGA

Protein sequence

MEVPTNKQALGVKWVYRTKLKSDGNVEKYKARLVVKGYKQEYGVDYEDIFAPVTKIETIRLILLLAAQNGWKVYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLLFTRNDKFLCDDFKNSMKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFRMENASPCNTPMDTNLKLCKDDIGEAVDPSLYRSLV

Homology

[Close]

BLAST of Cmc02g0044681 vs. NCBI nr
Match: KAA0055928.1 (integrase [Cucumis melo var. makuwa])

HSP 1 Score: 536.6 bits (1381), Expect = 1.2e-148
Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 0


Query: 1    MEVPTNKQALGVKWVYRTKLKSDGNVEKYKARLVVKGYKQEYGVDYEDIFAPVTKIETIR 60
            MEVPTNKQALGVKWVYRTKLKSDGNVEKYKARLVVKGYKQEYGVDYEDIFAPVTKIETIR
Sbjct: 783  MEVPTNKQALGVKWVYRTKLKSDGNVEKYKARLVVKGYKQEYGVDYEDIFAPVTKIETIR 842

Query: 61   LILLLAAQNGWKVYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQ 120
            LILLLAAQNGWKVYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQ
Sbjct: 843  LILLLAAQNGWKVYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQ 902

Query: 121  APRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLLFTRNDKFLCDDF 180
            APRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLLFTRNDKFLCDDF
Sbjct: 903  APRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLLFTRNDKFLCDDF 962

Query: 181  KNSMKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFRMENASPCNTPMDT 240
            KNSMKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFRMENASPCNTPMDT
Sbjct: 963  KNSMKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFRMENASPCNTPMDT 1022

Query: 241  NLKLCKDDIGEAVDPSLYRSLV 263
            NLKLCKDDIGEAVDPSLYRSLV
Sbjct: 1023 NLKLCKDDIGEAVDPSLYRSLV 1044

[Close]

BLAST of Cmc02g0044681 vs. NCBI nr
Match: TYK28134.1 (integrase [Cucumis melo var. makuwa])

HSP 1 Score: 526.6 bits (1355), Expect = 1.3e-145
Identity = 257/262 (98.09%), Postives = 258/262 (98.47%), Query Frame = 0


Query: 1   MEVPTNKQALGVKWVYRTKLKSDGNVEKYKARLVVKGYKQEYGVDYEDIFAPVTKIETIR 60
           MEVPTNKQALGVKWVYRTKLKSDGNVEKYKARLVVKGYKQEYGVDYEDIFAPVT+IETIR
Sbjct: 176 MEVPTNKQALGVKWVYRTKLKSDGNVEKYKARLVVKGYKQEYGVDYEDIFAPVTRIETIR 235

Query: 61  LILLLAAQNGWKVYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQ 120
           LIL LAAQNGWKVYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQ
Sbjct: 236 LILSLAAQNGWKVYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQ 295

Query: 121 APRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLLFTRNDKFLCDDF 180
           APRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLLFT NDKFLCDDF
Sbjct: 296 APRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLLFTGNDKFLCDDF 355

Query: 181 KNSMKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFRMENASPCNTPMDT 240
           KNSMK EFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFRMENASPCNTPMD 
Sbjct: 356 KNSMKNEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFRMENASPCNTPMDA 415

Query: 241 NLKLCKDDIGEAVDPSLYRSLV 263
           NLKLCKDDIGEAVDPSLYRSLV
Sbjct: 416 NLKLCKDDIGEAVDPSLYRSLV 437

[Close]

BLAST of Cmc02g0044681 vs. NCBI nr
Match: TYK30104.1 (integrase [Cucumis melo var. makuwa])

HSP 1 Score: 524.2 bits (1349), Expect = 6.3e-145
Identity = 255/262 (97.33%), Postives = 259/262 (98.85%), Query Frame = 0


Query: 1    MEVPTNKQALGVKWVYRTKLKSDGNVEKYKARLVVKGYKQEYGVDYEDIFAPVTKIETIR 60
            ME+PTNKQALGVKWVYRTKLKSDGNVEKYKARLVVKGYKQEYGVDYE+IFAPVT+IETIR
Sbjct: 873  MELPTNKQALGVKWVYRTKLKSDGNVEKYKARLVVKGYKQEYGVDYEEIFAPVTRIETIR 932

Query: 61   LILLLAAQNGWKVYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQ 120
            LIL LAAQNGWKVYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQ
Sbjct: 933  LILSLAAQNGWKVYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQ 992

Query: 121  APRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLLFTRNDKFLCDDF 180
            APRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLLFT NDKFLCDDF
Sbjct: 993  APRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLLFTGNDKFLCDDF 1052

Query: 181  KNSMKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFRMENASPCNTPMDT 240
            KNSMKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFRMENASPCNTPMD 
Sbjct: 1053 KNSMKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFRMENASPCNTPMDA 1112

Query: 241  NLKLCKDDIGEAVDPSLYRSLV 263
            NL+LCKDDIGEAVDPSLYRSLV
Sbjct: 1113 NLELCKDDIGEAVDPSLYRSLV 1134

[Close]

BLAST of Cmc02g0044681 vs. NCBI nr
Match: TYJ95504.1 (integrase [Cucumis melo var. makuwa] >TYK08522.1 integrase [Cucumis melo var. makuwa] >TYK12883.1 integrase [Cucumis melo var. makuwa] >TYK20599.1 integrase [Cucumis melo var. makuwa])

HSP 1 Score: 523.9 bits (1348), Expect = 8.2e-145
Identity = 255/262 (97.33%), Postives = 258/262 (98.47%), Query Frame = 0


Query: 1    MEVPTNKQALGVKWVYRTKLKSDGNVEKYKARLVVKGYKQEYGVDYEDIFAPVTKIETIR 60
            ME+PTNKQALGVKWVYRTKLKSDGNVEKYKARLVVKGYKQEYGVDYE+IFAPVT+IETIR
Sbjct: 873  MELPTNKQALGVKWVYRTKLKSDGNVEKYKARLVVKGYKQEYGVDYEEIFAPVTRIETIR 932

Query: 61   LILLLAAQNGWKVYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQ 120
            LIL LAAQNGWKVYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQ
Sbjct: 933  LILSLAAQNGWKVYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQ 992

Query: 121  APRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLLFTRNDKFLCDDF 180
            APRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLLFT NDKFLCDDF
Sbjct: 993  APRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLLFTGNDKFLCDDF 1052

Query: 181  KNSMKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFRMENASPCNTPMDT 240
            KNSMK EFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFRMENASPCNTPMD 
Sbjct: 1053 KNSMKNEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFRMENASPCNTPMDA 1112

Query: 241  NLKLCKDDIGEAVDPSLYRSLV 263
            NLKLCKDDIGEAVDPSLYRSLV
Sbjct: 1113 NLKLCKDDIGEAVDPSLYRSLV 1134

[Close]

BLAST of Cmc02g0044681 vs. NCBI nr
Match: KAA0060377.1 (integrase [Cucumis melo var. makuwa])

HSP 1 Score: 523.9 bits (1348), Expect = 8.2e-145
Identity = 255/262 (97.33%), Postives = 258/262 (98.47%), Query Frame = 0


Query: 1    MEVPTNKQALGVKWVYRTKLKSDGNVEKYKARLVVKGYKQEYGVDYEDIFAPVTKIETIR 60
            ME+PTNKQALGVKWVYRTKLKSDGNVEKYKARLVVKGYKQEYGVDYE+IFAPVT+IETIR
Sbjct: 873  MELPTNKQALGVKWVYRTKLKSDGNVEKYKARLVVKGYKQEYGVDYEEIFAPVTRIETIR 932

Query: 61   LILLLAAQNGWKVYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQ 120
            LIL LAAQNGWKVYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQ
Sbjct: 933  LILSLAAQNGWKVYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQ 992

Query: 121  APRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLLFTRNDKFLCDDF 180
            APRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLLFT NDKFLCDDF
Sbjct: 993  APRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLLFTGNDKFLCDDF 1052

Query: 181  KNSMKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFRMENASPCNTPMDT 240
            KNSMK EFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFRMENASPCNTPMD 
Sbjct: 1053 KNSMKNEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFRMENASPCNTPMDA 1112

Query: 241  NLKLCKDDIGEAVDPSLYRSLV 263
            NLKLCKDDIGEAVDPSLYRSLV
Sbjct: 1113 NLKLCKDDIGEAVDPSLYRSLV 1134

[Close]

BLAST of Cmc02g0044681 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 7.6e-53
Identity = 105/248 (42.34%), Postives = 159/248 (64.11%), Query Frame = 0


Query: 1    MEVPTNKQALGVKWVYRTKLKSDGNVEKYKARLVVKGYKQEYGVDYEDIFAPVTKIETIR 60
            +E+P  K+ L  KWV++ K   D  + +YKARLVVKG++Q+ G+D+++IF+PV K+ +IR
Sbjct: 846  VELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIR 905

Query: 61   LILLLAAQNGWKVYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQ 120
             IL LAA    +V Q+DVK+AFL+G L+EEI++ QP G+   G++  V KL K+LYGLKQ
Sbjct: 906  TILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQ 965

Query: 121  APRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLLFTRNDKFLCDDF 180
            APR WY + DSF     + +   +  +Y K      F+I+ LYVDD+L    DK L    
Sbjct: 966  APRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKL 1025

Query: 181  KNSMKKEFEMSDMGLIHYFLGIEV--NQNEGEIVISQQKYAHDLLKKFRMENASPCNTPM 240
            K  + K F+M D+G     LG+++   +   ++ +SQ+KY   +L++F M+NA P +TP+
Sbjct: 1026 KGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPL 1085

Query: 241  DTNLKLCK 247
              +LKL K
Sbjct: 1086 AGHLKLSK 1093

[Close]

BLAST of Cmc02g0044681 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 2.1e-50
Identity = 102/260 (39.23%), Postives = 158/260 (60.77%), Query Frame = 0


Query: 4    PTNKQALGVKWVYRTKLKSDGNVEKYKARLVVKGYKQEYGVDYEDIFAPVTKIETIRLIL 63
            P++   +G +W++  K  SDG++ +YKARLV KGY Q  G+DY + F+PV K  +IR++L
Sbjct: 992  PSHVTIVGCRWIFTKKYNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVL 1051

Query: 64   LLAAQNGWKVYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPR 123
             +A    W + Q+DV +AFL G L ++++++QP G++ +     V KL+KALYGLKQAPR
Sbjct: 1052 GVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPR 1111

Query: 124  AWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSL-YVDDLLFTRNDKFLCDDFKN 183
            AWY  + ++ L  GF     + +L+V +   GK ++  L YVDD+L T ND  L  +  +
Sbjct: 1112 AWYVELRNYLLTIGFVNSVSDTSLFVLQ--RGKSIVYMLVYVDDILITGNDPTLLHNTLD 1171

Query: 184  SMKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFRMENASPCNTPMDTNL 243
            ++ + F + D   +HYFLGIE  +    + +SQ++Y  DLL +  M  A P  TPM  + 
Sbjct: 1172 NLSQRFSVKDHEELHYFLGIEAKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSP 1231

Query: 244  KLCKDDIGEAVDPSLYRSLV 263
            KL      +  DP+ YR +V
Sbjct: 1232 KLSLYSGTKLTDPTEYRGIV 1249

[Close]

BLAST of Cmc02g0044681 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 4.6e-50
Identity = 102/260 (39.23%), Postives = 158/260 (60.77%), Query Frame = 0


Query: 4    PTNKQALGVKWVYRTKLKSDGNVEKYKARLVVKGYKQEYGVDYEDIFAPVTKIETIRLIL 63
            P +   +G +W++  K  SDG++ +YKARLV KGY Q  G+DY + F+PV K  +IR++L
Sbjct: 975  PPSVTIVGCRWIFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVL 1034

Query: 64   LLAAQNGWKVYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPR 123
             +A    W + Q+DV +AFL G L +E++++QP G+V +   + V +L+KA+YGLKQAPR
Sbjct: 1035 GVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPR 1094

Query: 124  AWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSL-YVDDLLFTRNDKFLCDDFKN 183
            AWY  + ++ L  GF     + +L+V +   G+ +I  L YVDD+L T ND  L     +
Sbjct: 1095 AWYVELRTYLLTVGFVNSISDTSLFVLQ--RGRSIIYMLVYVDDILITGNDTVLLKHTLD 1154

Query: 184  SMKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFRMENASPCNTPMDTNL 243
            ++ + F + +   +HYFLGIE  +    + +SQ++Y  DLL +  M  A P  TPM T+ 
Sbjct: 1155 ALSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSP 1214

Query: 244  KLCKDDIGEAVDPSLYRSLV 263
            KL      +  DP+ YR +V
Sbjct: 1215 KLTLHSGTKLPDPTEYRGIV 1232

[Close]

BLAST of Cmc02g0044681 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 182.2 bits (461), Expect = 7.7e-45
Identity = 93/240 (38.75%), Postives = 139/240 (57.92%), Query Frame = 0


Query: 4    PTNKQALGVKWVYRTKLKSDGNVEKYKARLVVKGYKQEYGVDYEDIFAPVTKIETIRLIL 63
            P NK  +  +WV+  K    GN  +YKARLV +G+ Q+Y +DYE+ FAPV +I + R IL
Sbjct: 929  PENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFIL 988

Query: 64   LLAAQNGWKVYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPR 123
             L  Q   KV+QMDVK+AFLNG LKEEI++  P G       + V KL KA+YGLKQA R
Sbjct: 989  SLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGI--SCNSDNVCKLNKAIYGLKQAAR 1048

Query: 124  AWYSRIDSFFLKTGFRRCPYEHALYV-KEDKYGKFLIVSLYVDDLLFTRNDKFLCDDFKN 183
             W+   +    +  F     +  +Y+  +    + + V LYVDD++    D    ++FK 
Sbjct: 1049 CWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKR 1108

Query: 184  SMKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFRMENASPCNTPMDTNL 243
             + ++F M+D+  I +F+GI +   E +I +SQ  Y   +L KF MEN +  +TP+ + +
Sbjct: 1109 YLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKI 1166

[Close]

BLAST of Cmc02g0044681 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 106.7 bits (265), Expect = 4.1e-22
Identity = 62/188 (32.98%), Postives = 96/188 (51.06%), Query Frame = 0


Query: 76  MDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQAPRAWYSRIDSFFLK 135
           MDV +AFLN  + E I+V QP G+V     + V++L   +YGLKQAP  W   I++   K
Sbjct: 1   MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60

Query: 136 TGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLLFTRNDKFLCDDFKNSMKKEFEMSDMGL 195
            GF R   EH LY +    G  + +++YVDDLL       + D  K  + K + M D+G 
Sbjct: 61  IGFCRHEGEHGLYFRSTSDGP-IYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGK 120

Query: 196 IHYFLGIEVNQ-NEGEIVISQQKYAHDLLKKFRMENASPCNTPMDTNLKLCKDDIGEAVD 255
           +  FLG+ ++Q + G+I +S Q Y      +  +       TP+  +  L +       D
Sbjct: 121 VDKFLGLNIHQSSNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHLKD 180

Query: 256 PSLYRSLV 263
            + Y+S+V
Sbjct: 181 ITPYQSIV 187

[Close]

BLAST of Cmc02g0044681 vs. ExPASy TrEMBL
Match: A0A5A7ULH0 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold319G00480 PE=4 SV=1)

HSP 1 Score: 536.6 bits (1381), Expect = 5.9e-149
Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 0


Query: 1    MEVPTNKQALGVKWVYRTKLKSDGNVEKYKARLVVKGYKQEYGVDYEDIFAPVTKIETIR 60
            MEVPTNKQALGVKWVYRTKLKSDGNVEKYKARLVVKGYKQEYGVDYEDIFAPVTKIETIR
Sbjct: 783  MEVPTNKQALGVKWVYRTKLKSDGNVEKYKARLVVKGYKQEYGVDYEDIFAPVTKIETIR 842

Query: 61   LILLLAAQNGWKVYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQ 120
            LILLLAAQNGWKVYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQ
Sbjct: 843  LILLLAAQNGWKVYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQ 902

Query: 121  APRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLLFTRNDKFLCDDF 180
            APRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLLFTRNDKFLCDDF
Sbjct: 903  APRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLLFTRNDKFLCDDF 962

Query: 181  KNSMKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFRMENASPCNTPMDT 240
            KNSMKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFRMENASPCNTPMDT
Sbjct: 963  KNSMKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFRMENASPCNTPMDT 1022

Query: 241  NLKLCKDDIGEAVDPSLYRSLV 263
            NLKLCKDDIGEAVDPSLYRSLV
Sbjct: 1023 NLKLCKDDIGEAVDPSLYRSLV 1044

[Close]

BLAST of Cmc02g0044681 vs. ExPASy TrEMBL
Match: A0A5D3DX80 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold289G00410 PE=4 SV=1)

HSP 1 Score: 526.6 bits (1355), Expect = 6.1e-146
Identity = 257/262 (98.09%), Postives = 258/262 (98.47%), Query Frame = 0


Query: 1   MEVPTNKQALGVKWVYRTKLKSDGNVEKYKARLVVKGYKQEYGVDYEDIFAPVTKIETIR 60
           MEVPTNKQALGVKWVYRTKLKSDGNVEKYKARLVVKGYKQEYGVDYEDIFAPVT+IETIR
Sbjct: 176 MEVPTNKQALGVKWVYRTKLKSDGNVEKYKARLVVKGYKQEYGVDYEDIFAPVTRIETIR 235

Query: 61  LILLLAAQNGWKVYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQ 120
           LIL LAAQNGWKVYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQ
Sbjct: 236 LILSLAAQNGWKVYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQ 295

Query: 121 APRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLLFTRNDKFLCDDF 180
           APRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLLFT NDKFLCDDF
Sbjct: 296 APRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLLFTGNDKFLCDDF 355

Query: 181 KNSMKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFRMENASPCNTPMDT 240
           KNSMK EFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFRMENASPCNTPMD 
Sbjct: 356 KNSMKNEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFRMENASPCNTPMDA 415

Query: 241 NLKLCKDDIGEAVDPSLYRSLV 263
           NLKLCKDDIGEAVDPSLYRSLV
Sbjct: 416 NLKLCKDDIGEAVDPSLYRSLV 437

[Close]

BLAST of Cmc02g0044681 vs. ExPASy TrEMBL
Match: A0A5D3E2J1 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00840 PE=4 SV=1)

HSP 1 Score: 524.2 bits (1349), Expect = 3.0e-145
Identity = 255/262 (97.33%), Postives = 259/262 (98.85%), Query Frame = 0


Query: 1    MEVPTNKQALGVKWVYRTKLKSDGNVEKYKARLVVKGYKQEYGVDYEDIFAPVTKIETIR 60
            ME+PTNKQALGVKWVYRTKLKSDGNVEKYKARLVVKGYKQEYGVDYE+IFAPVT+IETIR
Sbjct: 873  MELPTNKQALGVKWVYRTKLKSDGNVEKYKARLVVKGYKQEYGVDYEEIFAPVTRIETIR 932

Query: 61   LILLLAAQNGWKVYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQ 120
            LIL LAAQNGWKVYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQ
Sbjct: 933  LILSLAAQNGWKVYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQ 992

Query: 121  APRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLLFTRNDKFLCDDF 180
            APRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLLFT NDKFLCDDF
Sbjct: 993  APRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLLFTGNDKFLCDDF 1052

Query: 181  KNSMKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFRMENASPCNTPMDT 240
            KNSMKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFRMENASPCNTPMD 
Sbjct: 1053 KNSMKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFRMENASPCNTPMDA 1112

Query: 241  NLKLCKDDIGEAVDPSLYRSLV 263
            NL+LCKDDIGEAVDPSLYRSLV
Sbjct: 1113 NLELCKDDIGEAVDPSLYRSLV 1134

[Close]

BLAST of Cmc02g0044681 vs. ExPASy TrEMBL
Match: A0A5D3CLV1 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold132G00180 PE=4 SV=1)

HSP 1 Score: 523.9 bits (1348), Expect = 4.0e-145
Identity = 255/262 (97.33%), Postives = 258/262 (98.47%), Query Frame = 0


Query: 1    MEVPTNKQALGVKWVYRTKLKSDGNVEKYKARLVVKGYKQEYGVDYEDIFAPVTKIETIR 60
            ME+PTNKQALGVKWVYRTKLKSDGNVEKYKARLVVKGYKQEYGVDYE+IFAPVT+IETIR
Sbjct: 873  MELPTNKQALGVKWVYRTKLKSDGNVEKYKARLVVKGYKQEYGVDYEEIFAPVTRIETIR 932

Query: 61   LILLLAAQNGWKVYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQ 120
            LIL LAAQNGWKVYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQ
Sbjct: 933  LILSLAAQNGWKVYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQ 992

Query: 121  APRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLLFTRNDKFLCDDF 180
            APRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLLFT NDKFLCDDF
Sbjct: 993  APRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLLFTGNDKFLCDDF 1052

Query: 181  KNSMKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFRMENASPCNTPMDT 240
            KNSMK EFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFRMENASPCNTPMD 
Sbjct: 1053 KNSMKNEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFRMENASPCNTPMDA 1112

Query: 241  NLKLCKDDIGEAVDPSLYRSLV 263
            NLKLCKDDIGEAVDPSLYRSLV
Sbjct: 1113 NLKLCKDDIGEAVDPSLYRSLV 1134

[Close]

BLAST of Cmc02g0044681 vs. ExPASy TrEMBL
Match: A0A5D3BQ81 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G00890 PE=4 SV=1)

HSP 1 Score: 523.9 bits (1348), Expect = 4.0e-145
Identity = 255/262 (97.33%), Postives = 258/262 (98.47%), Query Frame = 0


Query: 1    MEVPTNKQALGVKWVYRTKLKSDGNVEKYKARLVVKGYKQEYGVDYEDIFAPVTKIETIR 60
            ME+PTNKQALGVKWVYRTKLKSDGNVEKYKARLVVKGYKQEYGVDYE+IFAPVT+IETIR
Sbjct: 873  MELPTNKQALGVKWVYRTKLKSDGNVEKYKARLVVKGYKQEYGVDYEEIFAPVTRIETIR 932

Query: 61   LILLLAAQNGWKVYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQ 120
            LIL LAAQNGWKVYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQ
Sbjct: 933  LILSLAAQNGWKVYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEEEKVYKLKKALYGLKQ 992

Query: 121  APRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLLFTRNDKFLCDDF 180
            APRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLLFT NDKFLCDDF
Sbjct: 993  APRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLLFTGNDKFLCDDF 1052

Query: 181  KNSMKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFRMENASPCNTPMDT 240
            KNSMK EFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFRMENASPCNTPMD 
Sbjct: 1053 KNSMKNEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFRMENASPCNTPMDA 1112

Query: 241  NLKLCKDDIGEAVDPSLYRSLV 263
            NLKLCKDDIGEAVDPSLYRSLV
Sbjct: 1113 NLKLCKDDIGEAVDPSLYRSLV 1134

[Close]

BLAST of Cmc02g0044681 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 201.8 bits (512), Expect = 6.6e-52
Identity = 102/264 (38.64%), Postives = 160/264 (60.61%), Query Frame = 0


Query: 3   VPTNKQALGVKWVYRTKLKSDGNVEKYKARLVVKGYKQEYGVDYEDIFAPVTKIETIRLI 62
           +P NK+ +G KWVY+ K  SDG +E+YKARLV KGY Q+ G+D+ + F+PV K+ +++LI
Sbjct: 120 LPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLI 179

Query: 63  LLLAAQNGWKVYQMDVKSAFLNGHLKEEIFVAQPLGYVQRGEE----EKVYKLKKALYGL 122
           L ++A   + ++Q+D+ +AFLNG L EEI++  P GY  R  +      V  LKK++YGL
Sbjct: 180 LAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGL 239

Query: 123 KQAPRAWYSRIDSFFLKTGFRRCPYEHALYVKEDKYGKFLIVSLYVDDLLFTRNDKFLCD 182
           KQA R W+ +     +  GF +   +H  ++K      FL V +YVDD++   N+    D
Sbjct: 240 KQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITA-TLFLCVLVYVDDIIICSNNDAAVD 299

Query: 183 DFKNSMKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHDLLKKFRMENASPCNTPM 242
           + K+ +K  F++ D+G + YFLG+E+ ++   I I Q+KYA DLL +  +    P + PM
Sbjct: 300 ELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPM 359

Query: 243 DTNLKLCKDDIGEAVDPSLYRSLV 263
           D ++       G+ VD   YR L+
Sbjct: 360 DPSVTFSAHSGGDFVDAKAYRRLI 382

[Close]

BLAST of Cmc02g0044681 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 71.2 bits (173), Expect = 1.4e-12
Identity = 32/65 (49.23%), Postives = 46/65 (70.77%), Query Frame = 0


Query: 4   PTNKQALGVKWVYRTKLKSDGNVEKYKARLVVKGYKQEYGVDYEDIFAPVTKIETIRLIL 63
           P N+  LG KWV++TKL SDG +++ KARLV KG+ QE G+ + + ++PV +  TIR IL
Sbjct: 63  PVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTIL 122

Query: 64  LLAAQ 69
            +A Q
Sbjct: 123 NVAQQ 127

[Close]

BLAST of Cmc02g0044681 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 66.2 bits (160), Expect = 4.4e-11
Identity = 35/101 (34.65%), Postives = 53/101 (52.48%), Query Frame = 0


Query: 162 LYVDDLLFTRNDKFLCDDFKNSMKKEFEMSDMGLIHYFLGIEVNQNEGEIVISQQKYAHD 221
           LYVDD+L T +   L +     +   F M D+G +HYFLGI++  +   + +SQ KYA  
Sbjct: 5   LYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQ 64

Query: 222 LLKKFRMENASPCNTPMDTNLKLCKDDIGEAVDPSLYRSLV 263
           +L    M +  P +TP+   L        +  DPS +RS+V
Sbjct: 65  ILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRSIV 104

The following BLAST results are available for this feature:

BLAST of Cmc02g0044681 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0055928.1	1.2e-148	100.00	integrase [Cucumis melo var. makuwa]	[more]
TYK28134.1	1.3e-145	98.09	integrase [Cucumis melo var. makuwa]	[more]
TYK30104.1	6.3e-145	97.33	integrase [Cucumis melo var. makuwa]	[more]
TYJ95504.1	8.2e-145	97.33	integrase [Cucumis melo var. makuwa] >TYK08522.1 integrase [Cucumis melo var. ma...	[more]
KAA0060377.1	8.2e-145	97.33	integrase [Cucumis melo var. makuwa]	[more]

BLAST of Cmc02g0044681 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	7.6e-53	42.34	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
Q94HW2	2.1e-50	39.23	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	4.6e-50	39.23	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P04146	7.7e-45	38.75	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P25600	4.1e-22	32.98	Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT...	[more]

BLAST of Cmc02g0044681 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7ULH0	5.9e-149	100.00	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold319G00480 PE=4...	[more]
A0A5D3DX80	6.1e-146	98.09	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold289G00410 PE=4...	[more]
A0A5D3E2J1	3.0e-145	97.33	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00840 PE=4...	[more]
A0A5D3CLV1	4.0e-145	97.33	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold132G00180 PE=4...	[more]
A0A5D3BQ81	4.0e-145	97.33	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G00890 PE=4...	[more]

BLAST of Cmc02g0044681 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	6.6e-52	38.64	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00820.1	1.4e-12	49.23	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]
ATMG00810.1	4.4e-11	34.65	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 2..238 e-value: 2.3E-83 score: 279.5
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 4..250
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 4..222

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc02g0044681.1	Cmc02g0044681.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006397	mRNA processing
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0008270	zinc ion binding