Cmc02g0044601 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc02g0044601
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Unknown protein
Location	CMiso1.1chr02: 7862120 .. 7863968 (+)
RNA-Seq Expression	Cmc02g0044601
Synteny	Cmc02g0044601

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCATTGGTTAATATTTTTACTCGATGAATTAAATATTTAAGATCAATGGAAGGGTAGGATAAAAGATACCTATACACGTAGAGAAGTAGATGTGGAAGGTGGGCATTCATTCCTTCATATGGAACAACATCAACATAGAAATTAAAACAGTAAAAAACCTAAAAGAGTTCCATTACCTTGAAAAAGTATCTACATATTCCAAAGCAGTAAAATAAAACTACAAAATATCTTAACCAAATAACTGTATAATTTAAAAAACACAGAAAAACCATAAACATTATTATTTCTCTCACAGTCATTCAACAATGGCTTCAGGCTCAGGATTAAACTCCAATATCTTCTTCTTCTTACAAATCTTCATCAATCCAAACCACAAAATCCCACCCACCGTCATTCCAACACTCACCAACAACACATTCTTATGAGTAAAAACCATCACAACCACCAAAAACCCTGCCGGAATCAAACACATCACAATCAAACCTGGCAGTTTCAATGGAACTTTGAACGGCCTCTTTATCCCTGGATGCTTCCATCTCAACCAAACAAACGATGACAATTCCAACAACATTCCTAAACTGTATATGAAATTCGCCGACGCTACAATGTCCGTGAAATCCATGTACGAAACCGCCAGCGAAATTGCCGTGCAAATCACAATCCCAATCCATGGCGTCTTGAACCATTTCGCTCTACTCCCAAAGAACTTGGGTAAAACCCCAATCTCCGCCATACCCAGAATTTGATACGCGCTGCTGCTTAATTGGGCTTCGAAAAGCCCAATTGCTGATAACGTTGAACCAATTTCCAGGAGGATTTTCAGCCATTTTCCGGCGATTATTCCGGCAGCTTGTGCGTGGAATCCAGATCCCCAAGCGGATTGTTCAACATCTACGGCACCGATTACGGCTAAGAGTGGGACTAAGTAAGAAAGACAAGTGAAAATTACAGAGACGAACAGAGCCTTGGGGAATGTTTTCTGGGGGTTTTCTACTTCTCCGGCGAGTGTGCTTACATTATCCCAGAAATTGAGGTTCCAAAACAGAGTGTTGAGATATAGATTCCAATCCCTTTCCTTATCGCCCAAAATCAGCCATCGATGGGGTTTAATTTTGGGGATTGCGATGAAGGTCATTAAAATGAAGGGTAAGAGAGATAAGAAGGCTAAAACGACGGCCACGTATCCGACGATGGTGAGACCGATGTAGTTGAGGAGGGCGAGGATGAGGGTGGAGGCGAGGACGGCGATGCGGCGGGGCCAGCCGGATTCAAGCGGCGGAGCGATTTTTTTGATGTAATCGATACAGAGAACAGGGAAGGCGGCGATGTTGATGACGCCGCTGAGGAGTTTCCAGGTACCCATGAGAGAACCCCAGAAGGGTCCGAAGGCTCTTTCGGCCCAAATGACGAAGCCGCCGTTGCCGGGGAAAGCGGTGGAGAGCTCCGCGGTGATTAGAGCCTCCGGGACACTCCATATGAAAGGGAAGAGGATGAAGCCGACGATGGCGAGGAGAGGTCCGGCTGCTTGGACGGTAGGCTCTTCGCCGTAAGGGCCGCCGGCGACCTCGAAGTAGATGAGGAAGATGAGGGGGATTAGAGTGAGTTTTTTTCTGACTGCGGCGGGGGTGGAGGGAGTGGTTGTGGGGAGGATTTGAGAAGAGGAATCGGTGGTGGGGGGTAGGCTGGAGTTGGACTGTTTGTCATCTGCCATGATTGATTGGGAGATGCTAACAAACAAACGAACAAAGAAGATACAACCAAACAACTAAAAATAGAGCCTTCTAAAATTATAATAAAAAAAGAAAAATGAAAAATATATCAGCAAGTTTGTTATTAATACTATTAATT

mRNA sequence

CTCATTGGTTAATATTTTTACTCGATGAATTAAATATTTAAGATCAATGGAAGGGTAGGATAAAAGATACCTATACACGTAGAGAAGTAGATGTGGAAGGTGGGCATTCATTCCTTCATATGGAACAACATCAACATAGAAATTAAAACAGTAAAAAACCTAAAAGAGTTCCATTACCTTGAAAAAGTATCTACATATTCCAAAGCAGTAAAATAAAACTACAAAATATCTTAACCAAATAACTGTATAATTTAAAAAACACAGAAAAACCATAAACATTATTATTTCTCTCACAGTCATTCAACAATGGCTTCAGGCTCAGGATTAAACTCCAATATCTTCTTCTTCTTACAAATCTTCATCAATCCAAACCACAAAATCCCACCCACCGTCATTCCAACACTCACCAACAACACATTCTTATGAGTAAAAACCATCACAACCACCAAAAACCCTGCCGGAATCAAACACATCACAATCAAACCTGGCAGTTTCAATGGAACTTTGAACGGCCTCTTTATCCCTGGATGCTTCCATCTCAACCAAACAAACGATGACAATTCCAACAACATTCCTAAACTGTATATGAAATTCGCCGACGCTACAATGTCCGTGAAATCCATGTACGAAACCGCCAGCGAAATTGCCGTGCAAATCACAATCCCAATCCATGGCGTCTTGAACCATTTCGCTCTACTCCCAAAGAACTTGGGTAAAACCCCAATCTCCGCCATACCCAGAATTTGATACGCGCTGCTGCTTAATTGGGCTTCGAAAAGCCCAATTGCTGATAACGTTGAACCAATTTCCAGGAGGATTTTCAGCCATTTTCCGGCGATTATTCCGGCAGCTTGTGCGTGGAATCCAGATCCCCAAGCGGATTGTTCAACATCTACGGCACCGATTACGGCTAAGAGTGGGACTAAGTAAGAAAGACAAGTGAAAATTACAGAGACGAACAGAGCCTTGGGGAATGTTTTCTGGGGGTTTTCTACTTCTCCGGCGAGTGTGCTTACATTATCCCAGAAATTGAGGTTCCAAAACAGAGTGTTGAGATATAGATTCCAATCCCTTTCCTTATCGCCCAAAATCAGCCATCGATGGGGTTTAATTTTGGGGATTGCGATGAAGGTCATTAAAATGAAGGGTAAGAGAGATAAGAAGGCTAAAACGACGGCCACGTATCCGACGATGGTGAGACCGATGTAGTTGAGGAGGGCGAGGATGAGGGTGGAGGCGAGGACGGCGATGCGGCGGGGCCAGCCGGATTCAAGCGGCGGAGCGATTTTTTTGATGTAATCGATACAGAGAACAGGGAAGGCGGCGATGTTGATGACGCCGCTGAGGAGTTTCCAGGTACCCATGAGAGAACCCCAGAAGGGTCCGAAGGCTCTTTCGGCCCAAATGACGAAGCCGCCGTTGCCGGGGAAAGCGGTGGAGAGCTCCGCGGTGATTAGAGCCTCCGGGACACTCCATATGAAAGGGAAGAGGATGAAGCCGACGATGGCGAGGAGAGGTCCGGCTGCTTGGACGGTAGGCTCTTCGCCGTAAGGGCCGCCGGCGACCTCGAAGTAGATGAGGAAGATGAGGGGGATTAGAGTGAGTTTTTTTCTGACTGCGGCGGGGGTGGAGGGAGTGGTTGTGGGGAGGATTTGAGAAGAGGAATCGGTGGTGGGGGGTAGGCTGGAGTTGGACTGTTTGTCATCTGCCATGATTGATTGGGAGATGCTAACAAACAAACGAACAAAGAAGATACAACCAAACAACTAAAAATAGAGCCTTCTAAAATTATAATAAAAAAAGAAAAATGAAAAATATATCAGCAAGTTTGTTATTAATACTATTAATT

Coding sequence (CDS)

ATGTTGATGACGCCGCTGAGGAGTTTCCAGGTACCCATGAGAGAACCCCAGAAGGGTCCGAAGGCTCTTTCGGCCCAAATGACGAAGCCGCCGTTGCCGGGGAAAGCGGTGGAGAGCTCCGCGGTGATTAGAGCCTCCGGGACACTCCATATGAAAGGGAAGAGGATGAAGCCGACGATGGCGAGGAGAGGTCCGGCTGCTTGGACGGTAGGCTCTTCGCCGTAA

Protein sequence

MLMTPLRSFQVPMREPQKGPKALSAQMTKPPLPGKAVESSAVIRASGTLHMKGKRMKPTMARRGPAAWTVGSSP

Homology

[Close]

BLAST of Cmc02g0044601 vs. NCBI nr
Match: KCW87084.1 (hypothetical protein EUGRSUZ_B03618 [Eucalyptus grandis])

HSP 1 Score: 118.2 bits (295), Expect = 2.9e-23
Identity = 61/74 (82.43%), Postives = 65/74 (87.84%), Query Frame = 0


Query: 1  MLMTPLRSFQVPMREPQKGPKALSAQMTKPPLPGKAVESSAVIRASGTLHMKGKRMKPTM 60
          MLMTPLR+FQVPMREP+KGPKA SAQMTKPPLPG AVESSAV+RASGTLHMKGK  KP  
Sbjct: 9  MLMTPLRNFQVPMREPKKGPKARSAQMTKPPLPGNAVESSAVMRASGTLHMKGKMEKPRR 68

Query: 61 ARRGPAAWTVGSSP 75
          A +GPAA T GSSP
Sbjct: 69 ASKGPAACTAGSSP 82

[Close]

BLAST of Cmc02g0044601 vs. NCBI nr
Match: GFD51465.1 (hypothetical protein [Tanacetum cinerariifolium])

HSP 1 Score: 94.0 bits (232), Expect = 5.9e-16
Identity = 47/74 (63.51%), Postives = 56/74 (75.68%), Query Frame = 0


Query: 1  MLMTPLRSFQVPMREPQKGPKALSAQMTKPPLPGKAVESSAVIRASGTLHMKGKRMKPTM 60
          M +TP+R+F  P+++PQKGP AL AQMT PP PGK VESSAV RASG  H+ G  +KP +
Sbjct: 1  MFITPVRNFHEPIKDPQKGPNALWAQMTNPPFPGKVVESSAVTRASGIAHINGNIVKPKI 60

Query: 61 ARRGPAAWTVGSSP 75
          AR GPAA T GSSP
Sbjct: 61 ARSGPAACTAGSSP 74

[Close]

BLAST of Cmc02g0044601 vs. NCBI nr
Match: ONK73361.1 (uncharacterized protein A4U43_C04F30430 [Asparagus officinalis])

HSP 1 Score: 76.3 bits (186), Expect = 1.3e-10
Identity = 43/65 (66.15%), Postives = 46/65 (70.77%), Query Frame = 0


Query: 3  MTPLRSFQVPMREPQKGPKALSAQMTKPPLPGKAVESSAVIRASGTLHMKGKRMKPTMAR 62
          MTP R+FQV MREP KGPKA  AQ TKPPLP +A  SS VIRA G    KGKR KP + R
Sbjct: 1  MTPERNFQVAMREPGKGPKARWAQRTKPPLPWRAAASSTVIRALGMDQTKGKRRKPRIER 60

Query: 63 RGPAA 68
          RG AA
Sbjct: 61 RGAAA 65

[Close]

BLAST of Cmc02g0044601 vs. NCBI nr
Match: ABG22080.1 (hypothetical protein LOC_Os12g41634 [Oryza sativa Japonica Group])

HSP 1 Score: 59.3 bits (142), Expect = 1.6e-05
Identity = 33/60 (55.00%), Postives = 38/60 (63.33%), Query Frame = 0


Query: 7  RSFQVPMREPQKGPKALSAQMTKPPLPGKAVESSAVIRASGTLHMKGKRMKPTMARRGPA 66
          R+   PM +P+KGP A SAQ T PP PG AVESSAV+  SGT  M GK  K + A   PA
Sbjct: 3  RTAAAPMSDPEKGPNARSAQTTNPPFPGIAVESSAVMSDSGTAQMTGKMRKLSSANSRPA 62

[Close]

BLAST of Cmc02g0044601 vs. ExPASy TrEMBL
Match: A0A059D9C1 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_B03618 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.4e-23
Identity = 61/74 (82.43%), Postives = 65/74 (87.84%), Query Frame = 0


Query: 1  MLMTPLRSFQVPMREPQKGPKALSAQMTKPPLPGKAVESSAVIRASGTLHMKGKRMKPTM 60
          MLMTPLR+FQVPMREP+KGPKA SAQMTKPPLPG AVESSAV+RASGTLHMKGK  KP  
Sbjct: 9  MLMTPLRNFQVPMREPKKGPKARSAQMTKPPLPGNAVESSAVMRASGTLHMKGKMEKPRR 68

Query: 61 ARRGPAAWTVGSSP 75
          A +GPAA T GSSP
Sbjct: 69 ASKGPAACTAGSSP 82

[Close]

BLAST of Cmc02g0044601 vs. ExPASy TrEMBL
Match: A0A699WV44 (Uncharacterized protein OS=Tanacetum cinerariifolium OX=118510 GN=Tci_923434 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.9e-16
Identity = 47/74 (63.51%), Postives = 56/74 (75.68%), Query Frame = 0


Query: 1  MLMTPLRSFQVPMREPQKGPKALSAQMTKPPLPGKAVESSAVIRASGTLHMKGKRMKPTM 60
          M +TP+R+F  P+++PQKGP AL AQMT PP PGK VESSAV RASG  H+ G  +KP +
Sbjct: 1  MFITPVRNFHEPIKDPQKGPNALWAQMTNPPFPGKVVESSAVTRASGIAHINGNIVKPKI 60

Query: 61 ARRGPAAWTVGSSP 75
          AR GPAA T GSSP
Sbjct: 61 ARSGPAACTAGSSP 74

[Close]

BLAST of Cmc02g0044601 vs. ExPASy TrEMBL
Match: A0A0A9E3F8 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 4.7e-11
Identity = 43/72 (59.72%), Postives = 44/72 (61.11%), Query Frame = 0


Query: 3  MTPLRSFQVPMREPQKGPKALSAQMTKPPLPGKAVESSAVIRASGTLHMKGKRMKPTMAR 62
          MT LR F VP  EP  GPKA SA  TKPPLPG A  SSAV   SGT H KGK  KP   +
Sbjct: 1  MTQLRYFHVPRSEPASGPKARSAHRTKPPLPGSAAASSAVTSDSGTPHAKGKTRKPRSVK 60

Query: 63 RGPAAWTVGSSP 75
           GPAA T  S P
Sbjct: 61 SGPAARTARSEP 72

[Close]

BLAST of Cmc02g0044601 vs. ExPASy TrEMBL
Match: A0A5P1F9P4 (Uncharacterized protein OS=Asparagus officinalis OX=4686 GN=A4U43_C04F30430 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 6.2e-11
Identity = 43/65 (66.15%), Postives = 46/65 (70.77%), Query Frame = 0


Query: 3  MTPLRSFQVPMREPQKGPKALSAQMTKPPLPGKAVESSAVIRASGTLHMKGKRMKPTMAR 62
          MTP R+FQV MREP KGPKA  AQ TKPPLP +A  SS VIRA G    KGKR KP + R
Sbjct: 1  MTPERNFQVAMREPGKGPKARWAQRTKPPLPWRAAASSTVIRALGMDQTKGKRRKPRIER 60

Query: 63 RGPAA 68
          RG AA
Sbjct: 61 RGAAA 65

[Close]

BLAST of Cmc02g0044601 vs. ExPASy TrEMBL
Match: H2KX63 (Uncharacterized protein OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os12g41634 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 7.8e-06
Identity = 33/60 (55.00%), Postives = 38/60 (63.33%), Query Frame = 0


Query: 7  RSFQVPMREPQKGPKALSAQMTKPPLPGKAVESSAVIRASGTLHMKGKRMKPTMARRGPA 66
          R+   PM +P+KGP A SAQ T PP PG AVESSAV+  SGT  M GK  K + A   PA
Sbjct: 3  RTAAAPMSDPEKGPNARSAQTTNPPFPGIAVESSAVMSDSGTAQMTGKMRKLSSANSRPA 62

The following BLAST results are available for this feature:

BLAST of Cmc02g0044601 vs. NCBI nr


Match Name	E-value	Identity	Description
KCW87084.1	2.9e-23	82.43	hypothetical protein EUGRSUZ_B03618 [Eucalyptus grandis]	[more]
GFD51465.1	5.9e-16	63.51	hypothetical protein [Tanacetum cinerariifolium]	[more]
ONK73361.1	1.3e-10	66.15	uncharacterized protein A4U43_C04F30430 [Asparagus officinalis]	[more]
ABG22080.1	1.6e-05	55.00	hypothetical protein LOC_Os12g41634 [Oryza sativa Japonica Group]	[more]

BLAST of Cmc02g0044601 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc02g0044601 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A059D9C1	1.4e-23	82.43	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_B03618 PE=4 SV...	[more]
A0A699WV44	2.9e-16	63.51	Uncharacterized protein OS=Tanacetum cinerariifolium OX=118510 GN=Tci_923434 PE=...	[more]
A0A0A9E3F8	4.7e-11	59.72	Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1	[more]
A0A5P1F9P4	6.2e-11	66.15	Uncharacterized protein OS=Asparagus officinalis OX=4686 GN=A4U43_C04F30430 PE=4...	[more]
H2KX63	7.8e-06	55.00	Uncharacterized protein OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os12g416...	[more]

BLAST of Cmc02g0044601 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..74

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc02g0044601.1	Cmc02g0044601.1	mRNA