Cmc02g0043021 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc02g0043021
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr02: 5025407 .. 5027350 (+)
RNA-Seq Expression	Cmc02g0043021
Synteny	Cmc02g0043021

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCCCGCAGAATTGAAAGAACTGAAGGTACAGTTACAGGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTCTTATTCGTTAAGAAGAAGGACGGATCGATGCGTCTGTGCATTGACTATAGGGAGTTGAACAAAGTAACAGTAAAGAACAGATATCCCTTGCCCAGGATAGACGATCTATTTGACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGAGGATATACCGAAGACAGCATTTCGATCCAGATATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTCGTGATTGTGTTTATCGACGATATCTTGATATACTCTAAGACGGAGGCCGAACACGAGGAGCACTTACGTATGGTTTTGCAAACACTTCGGGATAATAAGTTGTACGCAAAGTTCTCGAAGTGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTAGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGGCCCGACCTTCCACAGTCAGTGAGGTTCGTAGTTTTCTGGGTTTAGCAGGCTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGAAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTTCAGACCCTTAAACAAAAGTTAGTTACCGCACCGGTTCTTACGGTACCTGATGGTTCTGGCAATTTCGTGATTTATAGTGATGCTTCCAAGAAGGGTCTGGGTTGTGTTTTGATGCAGCAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTTGAGTTGGCAGCAGTGGTTTTTGCTTTAAAAATATGGAGGCATTATTTATATGGTGAAAAGATACAGATATTCACAGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGGAAAGTATCACATTCAGCAGCACTCATTACCCGGCAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTGGGGACAGTTACCATGCAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCAGAGGATCATTGATGCTCAGAATAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAACGGCTGAGTTCTCGTTATCCTCTGATGGTGGACTGTTGTTTGAGAGACGCTTCTGTGTTCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCTGAGGCGCACAGTTCCCCATTTTCCATGCACCCAGGTAGCACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAAGTAGCAGAATTTGTTAGTAAATGCTTGGTGTGCCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGTGCATACCGGAATGGAAGTGGGAGAACGTGTCCATGGATTTCATTACAGGGCTACCGAGAACTCTGAGGGGTTTTACAGTGATCTGGGTTGTGGTGGACAGACTTACTAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAGATTGCACGGAGTGCCAGTGTCGATTGTTTCTGACAGAGATGCCCGTTTCACTTCCAAATTTTAG

mRNA sequence

ATGGCCCCCGCAGAATTGAAAGAACTGAAGGTACAGTTACAGGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTCTTATTCGTTAAGAAGAAGGACGGATCGATGCGTCTGTGCATTGACTATAGGGAGTTGAACAAAGTAACAGTAAAGAACAGATATCCCTTGCCCAGGATAGACGATCTATTTGACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGAGGATATACCGAAGACAGCATTTCGATCCAGATATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTCGTGATTGTGTTTATCGACGATATCTTGATATACTCTAAGACGGAGGCCGAACACGAGGAGCACTTACGTATGGTTTTGCAAACACTTCGGGATAATAAGTTGTACGCAAAGTTCTCGAAGTGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTAGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGGCCCGACCTTCCACAGTCAGTGAGGTTCGTAGTTTTCTGGGTTTAGCAGGCTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGAAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTTCAGACCCTTAAACAAAAGTTAGTTACCGCACCGGTTCTTACGGTACCTGATGGTTCTGGCAATTTCGTGATTTATAGTGATGCTTCCAAGAAGGGTCTGGGTTGTGTTTTGATGCAGCAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTTGAGTTGGCAGCAGTGGTTTTTGCTTTAAAAATATGGAGGCATTATTTATATGGTGAAAAGATACAGATATTCACAGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGGAAAGTATCACATTCAGCAGCACTCATTACCCGGCAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTGGGGACAGTTACCATGCAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCAGAGGATCATTGATGCTCAGAATAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAACGGCTGAGTTCTCGTTATCCTCTGATGGTGGACTGTTGTTTGAGAGACGCTTCTGTGTTCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCTGAGGCGCACAGTTCCCCATTTTCCATGCACCCAGGTAGCACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAAGTAGCAGAATTTGTTAGTAAATGCTTGGTGTGCCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGTGCATACCGGAATGGAAGTGGGAGAACGTGTCCATGGATTTCATTACAGGGCTACCGAGAACTCTGAGGGGTTTTACAGTGATCTGGGTTGTGGTGGACAGACTTACTAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAGATTGCACGGAGTGCCAGTGTCGATTGTTTCTGACAGAGATGCCCGTTTCACTTCCAAATTTTAG

Coding sequence (CDS)

ATGGCCCCCGCAGAATTGAAAGAACTGAAGGTACAGTTACAGGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTCTTATTCGTTAAGAAGAAGGACGGATCGATGCGTCTGTGCATTGACTATAGGGAGTTGAACAAAGTAACAGTAAAGAACAGATATCCCTTGCCCAGGATAGACGATCTATTTGACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGAGGATATACCGAAGACAGCATTTCGATCCAGATATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTCGTGATTGTGTTTATCGACGATATCTTGATATACTCTAAGACGGAGGCCGAACACGAGGAGCACTTACGTATGGTTTTGCAAACACTTCGGGATAATAAGTTGTACGCAAAGTTCTCGAAGTGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTAGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGGCCCGACCTTCCACAGTCAGTGAGGTTCGTAGTTTTCTGGGTTTAGCAGGCTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGAAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTTCAGACCCTTAAACAAAAGTTAGTTACCGCACCGGTTCTTACGGTACCTGATGGTTCTGGCAATTTCGTGATTTATAGTGATGCTTCCAAGAAGGGTCTGGGTTGTGTTTTGATGCAGCAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTTGAGTTGGCAGCAGTGGTTTTTGCTTTAAAAATATGGAGGCATTATTTATATGGTGAAAAGATACAGATATTCACAGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGGAAAGTATCACATTCAGCAGCACTCATTACCCGGCAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTGGGGACAGTTACCATGCAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCAGAGGATCATTGATGCTCAGAATAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAACGGCTGAGTTCTCGTTATCCTCTGATGGTGGACTGTTGTTTGAGAGACGCTTCTGTGTTCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCTGAGGCGCACAGTTCCCCATTTTCCATGCACCCAGGTAGCACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAAGTAGCAGAATTTGTTAGTAAATGCTTGGTGTGCCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGTGCATACCGGAATGGAAGTGGGAGAACGTGTCCATGGATTTCATTACAGGGCTACCGAGAACTCTGAGGGGTTTTACAGTGATCTGGGTTGTGGTGGACAGACTTACTAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAGATTGCACGGAGTGCCAGTGTCGATTGTTTCTGACAGAGATGCCCGTTTCACTTCCAAATTTTAG

Protein sequence

MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWARPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGTVTMQLAQLTVQPTLRQRIIDAQNNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRFCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLCIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF

Homology

[Close]

BLAST of Cmc02g0043021 vs. NCBI nr
Match: TYK01613.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1293.1 bits (3345), Expect = 0.0e+00
Identity = 640/647 (98.92%), Postives = 643/647 (99.38%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 834  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 893

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDED+PKTAFRSRYGHYEFIVMSFGLT
Sbjct: 894  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 953

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS
Sbjct: 954  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 1013

Query: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWARPSTVSEVRSFLGLAGYYRRFVENF 240
            KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW RPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 1014 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 1073

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 300
            SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSG+FVIYSDASKKGL
Sbjct: 1074 SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 1133

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 1134 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 1193

Query: 361  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 420
            KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR
Sbjct: 1194 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 1253

Query: 421  DLERAEIAVSVGTVTMQLAQLTVQPTLRQRIIDAQNNDPYLVEKRGLAEAGQTAEFSLSS 480
            DLERAEIAVSVG VTMQLAQLTVQPTLRQRIIDAQ+NDPYLVEKRGLAEAGQTAEFSLSS
Sbjct: 1254 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSS 1313

Query: 481  DGGLLFERRFCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 540
            DGGLLFERR CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF
Sbjct: 1314 DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 1373

Query: 541  VSKCLVCQQVKAPRQKPAGLLQPLCIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 600
            VSKCLVCQQVKAPRQKPAGLLQPL IPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Sbjct: 1374 VSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 1433

Query: 601  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 648
            KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF
Sbjct: 1434 KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 1480

[Close]

BLAST of Cmc02g0043021 vs. NCBI nr
Match: KAA0048687.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1282.3 bits (3317), Expect = 0.0e+00
Identity = 633/647 (97.84%), Postives = 639/647 (98.76%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 580  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 639

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDED+PKTAFRSRYGHYEFIVMSFGLT
Sbjct: 640  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 699

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS
Sbjct: 700  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 759

Query: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWARPSTVSEVRSFLGLAGYYRRFVENF 240
            KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW RPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 760  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 819

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 300
            SRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSG+FVIYSDASKKGL
Sbjct: 820  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 879

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 880  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 939

Query: 361  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 420
            KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR
Sbjct: 940  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 999

Query: 421  DLERAEIAVSVGTVTMQLAQLTVQPTLRQRIIDAQNNDPYLVEKRGLAEAGQTAEFSLSS 480
            DLERAEIAVSVG VTMQLAQLTVQPTLRQRIIDAQ+NDPYLVEKRGLAEAGQ  EFSLSS
Sbjct: 1000 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSS 1059

Query: 481  DGGLLFERRFCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 540
            DGGLLFERR CVPSDS VKTELLSEAHSSPFSMHPGSTKMY+D+KRVYWWRNMKREVAEF
Sbjct: 1060 DGGLLFERRLCVPSDSVVKTELLSEAHSSPFSMHPGSTKMYRDVKRVYWWRNMKREVAEF 1119

Query: 541  VSKCLVCQQVKAPRQKPAGLLQPLCIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 600
            VS+CLVCQQVKAPRQKPAGLLQPL IPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Sbjct: 1120 VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 1179

Query: 601  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 648
            KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF
Sbjct: 1180 KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 1226

[Close]

BLAST of Cmc02g0043021 vs. NCBI nr
Match: KAA0058399.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1281.5 bits (3315), Expect = 0.0e+00
Identity = 632/647 (97.68%), Postives = 640/647 (98.92%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 811  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 870

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDED+PKTAFRSRYGHYEFIVMSFGLT
Sbjct: 871  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 930

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLR+NKLYAKFS
Sbjct: 931  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRNNKLYAKFS 990

Query: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWARPSTVSEVRSFLGLAGYYRRFVENF 240
            KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW RPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 991  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 1050

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 300
            SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSG+FVIYSDASKKGL
Sbjct: 1051 SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 1110

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360
            GCVLMQQGKVVAYASRQLKSHE+NYPTHDLELAAVVFALKIWRHYLYGE IQIFTDHKSL
Sbjct: 1111 GCVLMQQGKVVAYASRQLKSHEKNYPTHDLELAAVVFALKIWRHYLYGENIQIFTDHKSL 1170

Query: 361  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 420
            KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR
Sbjct: 1171 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 1230

Query: 421  DLERAEIAVSVGTVTMQLAQLTVQPTLRQRIIDAQNNDPYLVEKRGLAEAGQTAEFSLSS 480
            DLERAEIAVSVG VTMQLAQLTVQPTLRQRIIDAQ+NDPYLVEKRGL EAGQ AEFSLSS
Sbjct: 1231 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLTEAGQAAEFSLSS 1290

Query: 481  DGGLLFERRFCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 540
            DGGLLFERR CVPSDSAVKT+LL+EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF
Sbjct: 1291 DGGLLFERRLCVPSDSAVKTDLLAEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 1350

Query: 541  VSKCLVCQQVKAPRQKPAGLLQPLCIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 600
            VSKCLVCQQVKAPRQKPAGLLQPL IPEWKWENVSMDFITGLPRTLRGFTV+WVVVDRLT
Sbjct: 1351 VSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVVWVVVDRLT 1410

Query: 601  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 648
            KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF
Sbjct: 1411 KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 1457

[Close]

BLAST of Cmc02g0043021 vs. NCBI nr
Match: KAA0057672.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1277.3 bits (3304), Expect = 0.0e+00
Identity = 631/647 (97.53%), Postives = 636/647 (98.30%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 98  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 157

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIVMSFGLT 120
           YPLPRIDDLFDQLQGATVFSKIDLRSG HQLRIKDED+PKTAFRSRYGHYEFIVMSFGLT
Sbjct: 158 YPLPRIDDLFDQLQGATVFSKIDLRSGCHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 217

Query: 121 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
           NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS
Sbjct: 218 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 277

Query: 181 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWARPSTVSEVRSFLGLAGYYRRFVENF 240
           KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW RPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 278 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 337

Query: 241 SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 300
           SR ATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSG+FVIYSDASKKGL
Sbjct: 338 SRTATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 397

Query: 301 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360
           GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 398 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 457

Query: 361 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 420
           KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR
Sbjct: 458 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 517

Query: 421 DLERAEIAVSVGTVTMQLAQLTVQPTLRQRIIDAQNNDPYLVEKRGLAEAGQTAEFSLSS 480
           DLERAEIAVSVG VTMQLAQLTVQPTLRQRIIDAQ+NDPYLVEKRGLAEAGQ  EFSLSS
Sbjct: 518 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSS 577

Query: 481 DGGLLFERRFCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 540
           DGGLLFERR CVPSDSAVKTELL+EAHSSPFSMHPGSTKMYQDLKR+YWWRNMKREVAEF
Sbjct: 578 DGGLLFERRLCVPSDSAVKTELLAEAHSSPFSMHPGSTKMYQDLKRIYWWRNMKREVAEF 637

Query: 541 VSKCLVCQQVKAPRQKPAGLLQPLCIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 600
           VSKCLVCQQVKAPRQKPAGLLQPL IPEWKWENVSMDFI GLPRTLRGFTVIWVVVDRLT
Sbjct: 638 VSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFIAGLPRTLRGFTVIWVVVDRLT 697

Query: 601 KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 648
           KSAHFVPGKSTYT SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF
Sbjct: 698 KSAHFVPGKSTYTTSKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 744

[Close]

BLAST of Cmc02g0043021 vs. NCBI nr
Match: KAA0045479.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1275.4 bits (3299), Expect = 0.0e+00
Identity = 629/647 (97.22%), Postives = 637/647 (98.45%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI+YRELNKVTVKNR
Sbjct: 122 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIEYRELNKVTVKNR 181

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIVMSFGLT 120
           YPLPRIDDLFDQLQGATVFS+IDLRSGYHQLRIKDED+PKTAFRSRYGHYEFIVMSFGLT
Sbjct: 182 YPLPRIDDLFDQLQGATVFSRIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 241

Query: 121 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
           NAPA FMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFS
Sbjct: 242 NAPAEFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFS 301

Query: 181 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWARPSTVSEVRSFLGLAGYYRRFVENF 240
           KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW RPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 302 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 361

Query: 241 SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 300
           SRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSG+FVIYSDASKKGL
Sbjct: 362 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 421

Query: 301 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360
           GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 422 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 481

Query: 361 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 420
           KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR
Sbjct: 482 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 541

Query: 421 DLERAEIAVSVGTVTMQLAQLTVQPTLRQRIIDAQNNDPYLVEKRGLAEAGQTAEFSLSS 480
           DLER EIAVSVG VTMQLAQLTVQPTLRQRIIDAQ+NDPYLVEKRGLAEAGQ  EFSLSS
Sbjct: 542 DLERTEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSS 601

Query: 481 DGGLLFERRFCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 540
           DGGLLFERR CVPSDSAVKTELLSEAH SPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF
Sbjct: 602 DGGLLFERRLCVPSDSAVKTELLSEAHGSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 661

Query: 541 VSKCLVCQQVKAPRQKPAGLLQPLCIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 600
           VS+CLVCQQVKAPRQKPAGLLQPL IPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Sbjct: 662 VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 721

Query: 601 KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 648
           KSAHFVPGKSTYTAS+WAQLYMSEIVRLHGVPVSIVSDRDARFTSKF
Sbjct: 722 KSAHFVPGKSTYTASEWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 768

[Close]

BLAST of Cmc02g0043021 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 8.3e-109
Identity = 219/657 (33.33%), Postives = 362/657 (55.10%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N 
Sbjct: 420  LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIVMSFGLT 120
            YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K AFR   G +E++VM +G++
Sbjct: 480  YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
             APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +
Sbjct: 540  TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWARPSTVSEVRSFLGLAGYYRRFVENF 240
            KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+   
Sbjct: 600  KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 300
            S++  PL  L +K   + W+     + + +KQ LV+ PVL   D S   ++ +DAS   +
Sbjct: 660  SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQI 360
            G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I
Sbjct: 720  GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

Query: 361  FTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAAL 420
             TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       +
Sbjct: 780  LTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------I 839

Query: 421  ITRQAPLHRDLERAEIAVSVGTVTMQLAQLTVQPTLRQRIIDAQNNDPYLVEKRGLAEAG 480
            +    P+ +D E   I          + Q+++    + +++    ND  L+    L    
Sbjct: 840  VDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNED 899

Query: 481  QTAEFSLSSDGGLLFERR--FCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYW 540
            +  E ++    GLL   +    +P+D+ +   ++ + H     +HPG   +   + R + 
Sbjct: 900  KRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFT 959

Query: 541  WRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLCIPEWKWENVSMDFITGLPRTLRGF 600
            W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+
Sbjct: 960  WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGY 1019

Query: 601  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSK 647
              ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+
Sbjct: 1020 NALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQ 1058

[Close]

BLAST of Cmc02g0043021 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 8.3e-109
Identity = 219/657 (33.33%), Postives = 362/657 (55.10%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N 
Sbjct: 420  LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIVMSFGLT 120
            YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K AFR   G +E++VM +G++
Sbjct: 480  YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
             APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +
Sbjct: 540  TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWARPSTVSEVRSFLGLAGYYRRFVENF 240
            KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+   
Sbjct: 600  KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 300
            S++  PL  L +K   + W+     + + +KQ LV+ PVL   D S   ++ +DAS   +
Sbjct: 660  SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQI 360
            G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I
Sbjct: 720  GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

Query: 361  FTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAAL 420
             TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       +
Sbjct: 780  LTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------I 839

Query: 421  ITRQAPLHRDLERAEIAVSVGTVTMQLAQLTVQPTLRQRIIDAQNNDPYLVEKRGLAEAG 480
            +    P+ +D E   I          + Q+++    + +++    ND  L+    L    
Sbjct: 840  VDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNED 899

Query: 481  QTAEFSLSSDGGLLFERR--FCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYW 540
            +  E ++    GLL   +    +P+D+ +   ++ + H     +HPG   +   + R + 
Sbjct: 900  KRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFT 959

Query: 541  WRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLCIPEWKWENVSMDFITGLPRTLRGF 600
            W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+
Sbjct: 960  WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGY 1019

Query: 601  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSK 647
              ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+
Sbjct: 1020 NALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQ 1058

[Close]

BLAST of Cmc02g0043021 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 8.3e-109
Identity = 219/657 (33.33%), Postives = 362/657 (55.10%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N 
Sbjct: 420  LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIVMSFGLT 120
            YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K AFR   G +E++VM +G++
Sbjct: 480  YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
             APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +
Sbjct: 540  TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWARPSTVSEVRSFLGLAGYYRRFVENF 240
            KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+   
Sbjct: 600  KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 300
            S++  PL  L +K   + W+     + + +KQ LV+ PVL   D S   ++ +DAS   +
Sbjct: 660  SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQI 360
            G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I
Sbjct: 720  GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

Query: 361  FTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAAL 420
             TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       +
Sbjct: 780  LTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------I 839

Query: 421  ITRQAPLHRDLERAEIAVSVGTVTMQLAQLTVQPTLRQRIIDAQNNDPYLVEKRGLAEAG 480
            +    P+ +D E   I          + Q+++    + +++    ND  L+    L    
Sbjct: 840  VDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNED 899

Query: 481  QTAEFSLSSDGGLLFERR--FCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYW 540
            +  E ++    GLL   +    +P+D+ +   ++ + H     +HPG   +   + R + 
Sbjct: 900  KRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFT 959

Query: 541  WRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLCIPEWKWENVSMDFITGLPRTLRGF 600
            W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+
Sbjct: 960  WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGY 1019

Query: 601  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSK 647
              ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+
Sbjct: 1020 NALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQ 1058

[Close]

BLAST of Cmc02g0043021 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 8.3e-109
Identity = 219/657 (33.33%), Postives = 362/657 (55.10%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N 
Sbjct: 420  LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIVMSFGLT 120
            YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K AFR   G +E++VM +G++
Sbjct: 480  YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
             APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +
Sbjct: 540  TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWARPSTVSEVRSFLGLAGYYRRFVENF 240
            KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+   
Sbjct: 600  KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 300
            S++  PL  L +K   + W+     + + +KQ LV+ PVL   D S   ++ +DAS   +
Sbjct: 660  SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQI 360
            G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I
Sbjct: 720  GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

Query: 361  FTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAAL 420
             TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       +
Sbjct: 780  LTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------I 839

Query: 421  ITRQAPLHRDLERAEIAVSVGTVTMQLAQLTVQPTLRQRIIDAQNNDPYLVEKRGLAEAG 480
            +    P+ +D E   I          + Q+++    + +++    ND  L+    L    
Sbjct: 840  VDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNED 899

Query: 481  QTAEFSLSSDGGLLFERR--FCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYW 540
            +  E ++    GLL   +    +P+D+ +   ++ + H     +HPG   +   + R + 
Sbjct: 900  KRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFT 959

Query: 541  WRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLCIPEWKWENVSMDFITGLPRTLRGF 600
            W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+
Sbjct: 960  WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGY 1019

Query: 601  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSK 647
              ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+
Sbjct: 1020 NALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQ 1058

[Close]

BLAST of Cmc02g0043021 vs. ExPASy Swiss-Prot
Match: P0CT37 (Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-4 PE=3 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 8.3e-109
Identity = 219/657 (33.33%), Postives = 362/657 (55.10%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N 
Sbjct: 420  LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIVMSFGLT 120
            YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K AFR   G +E++VM +G++
Sbjct: 480  YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
             APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +
Sbjct: 540  TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWARPSTVSEVRSFLGLAGYYRRFVENF 240
            KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+   
Sbjct: 600  KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 300
            S++  PL  L +K   + W+     + + +KQ LV+ PVL   D S   ++ +DAS   +
Sbjct: 660  SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQI 360
            G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I
Sbjct: 720  GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

Query: 361  FTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAAL 420
             TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       +
Sbjct: 780  LTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------I 839

Query: 421  ITRQAPLHRDLERAEIAVSVGTVTMQLAQLTVQPTLRQRIIDAQNNDPYLVEKRGLAEAG 480
            +    P+ +D E   I          + Q+++    + +++    ND  L+    L    
Sbjct: 840  VDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNED 899

Query: 481  QTAEFSLSSDGGLLFERR--FCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYW 540
            +  E ++    GLL   +    +P+D+ +   ++ + H     +HPG   +   + R + 
Sbjct: 900  KRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFT 959

Query: 541  WRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLCIPEWKWENVSMDFITGLPRTLRGF 600
            W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+
Sbjct: 960  WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGY 1019

Query: 601  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSK 647
              ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+
Sbjct: 1020 NALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQ 1058

[Close]

BLAST of Cmc02g0043021 vs. ExPASy TrEMBL
Match: A0A5D3BPI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G002120 PE=4 SV=1)

HSP 1 Score: 1293.1 bits (3345), Expect = 0.0e+00
Identity = 640/647 (98.92%), Postives = 643/647 (99.38%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 834  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 893

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDED+PKTAFRSRYGHYEFIVMSFGLT
Sbjct: 894  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 953

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS
Sbjct: 954  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 1013

Query: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWARPSTVSEVRSFLGLAGYYRRFVENF 240
            KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW RPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 1014 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 1073

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 300
            SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSG+FVIYSDASKKGL
Sbjct: 1074 SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 1133

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 1134 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 1193

Query: 361  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 420
            KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR
Sbjct: 1194 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 1253

Query: 421  DLERAEIAVSVGTVTMQLAQLTVQPTLRQRIIDAQNNDPYLVEKRGLAEAGQTAEFSLSS 480
            DLERAEIAVSVG VTMQLAQLTVQPTLRQRIIDAQ+NDPYLVEKRGLAEAGQTAEFSLSS
Sbjct: 1254 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSS 1313

Query: 481  DGGLLFERRFCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 540
            DGGLLFERR CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF
Sbjct: 1314 DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 1373

Query: 541  VSKCLVCQQVKAPRQKPAGLLQPLCIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 600
            VSKCLVCQQVKAPRQKPAGLLQPL IPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Sbjct: 1374 VSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 1433

Query: 601  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 648
            KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF
Sbjct: 1434 KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 1480

[Close]

BLAST of Cmc02g0043021 vs. ExPASy TrEMBL
Match: A0A5A7U330 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00040 PE=4 SV=1)

HSP 1 Score: 1282.3 bits (3317), Expect = 0.0e+00
Identity = 633/647 (97.84%), Postives = 639/647 (98.76%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 580  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 639

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDED+PKTAFRSRYGHYEFIVMSFGLT
Sbjct: 640  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 699

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS
Sbjct: 700  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 759

Query: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWARPSTVSEVRSFLGLAGYYRRFVENF 240
            KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW RPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 760  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 819

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 300
            SRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSG+FVIYSDASKKGL
Sbjct: 820  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 879

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 880  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 939

Query: 361  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 420
            KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR
Sbjct: 940  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 999

Query: 421  DLERAEIAVSVGTVTMQLAQLTVQPTLRQRIIDAQNNDPYLVEKRGLAEAGQTAEFSLSS 480
            DLERAEIAVSVG VTMQLAQLTVQPTLRQRIIDAQ+NDPYLVEKRGLAEAGQ  EFSLSS
Sbjct: 1000 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSS 1059

Query: 481  DGGLLFERRFCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 540
            DGGLLFERR CVPSDS VKTELLSEAHSSPFSMHPGSTKMY+D+KRVYWWRNMKREVAEF
Sbjct: 1060 DGGLLFERRLCVPSDSVVKTELLSEAHSSPFSMHPGSTKMYRDVKRVYWWRNMKREVAEF 1119

Query: 541  VSKCLVCQQVKAPRQKPAGLLQPLCIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 600
            VS+CLVCQQVKAPRQKPAGLLQPL IPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Sbjct: 1120 VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 1179

Query: 601  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 648
            KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF
Sbjct: 1180 KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 1226

[Close]

BLAST of Cmc02g0043021 vs. ExPASy TrEMBL
Match: A0A5A7UY04 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold409G001070 PE=4 SV=1)

HSP 1 Score: 1281.5 bits (3315), Expect = 0.0e+00
Identity = 632/647 (97.68%), Postives = 640/647 (98.92%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 811  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 870

Query: 61   YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDED+PKTAFRSRYGHYEFIVMSFGLT
Sbjct: 871  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 930

Query: 121  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLR+NKLYAKFS
Sbjct: 931  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRNNKLYAKFS 990

Query: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWARPSTVSEVRSFLGLAGYYRRFVENF 240
            KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW RPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 991  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 1050

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 300
            SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSG+FVIYSDASKKGL
Sbjct: 1051 SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 1110

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360
            GCVLMQQGKVVAYASRQLKSHE+NYPTHDLELAAVVFALKIWRHYLYGE IQIFTDHKSL
Sbjct: 1111 GCVLMQQGKVVAYASRQLKSHEKNYPTHDLELAAVVFALKIWRHYLYGENIQIFTDHKSL 1170

Query: 361  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 420
            KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR
Sbjct: 1171 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 1230

Query: 421  DLERAEIAVSVGTVTMQLAQLTVQPTLRQRIIDAQNNDPYLVEKRGLAEAGQTAEFSLSS 480
            DLERAEIAVSVG VTMQLAQLTVQPTLRQRIIDAQ+NDPYLVEKRGL EAGQ AEFSLSS
Sbjct: 1231 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLTEAGQAAEFSLSS 1290

Query: 481  DGGLLFERRFCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 540
            DGGLLFERR CVPSDSAVKT+LL+EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF
Sbjct: 1291 DGGLLFERRLCVPSDSAVKTDLLAEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 1350

Query: 541  VSKCLVCQQVKAPRQKPAGLLQPLCIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 600
            VSKCLVCQQVKAPRQKPAGLLQPL IPEWKWENVSMDFITGLPRTLRGFTV+WVVVDRLT
Sbjct: 1351 VSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVVWVVVDRLT 1410

Query: 601  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 648
            KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF
Sbjct: 1411 KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 1457

[Close]

BLAST of Cmc02g0043021 vs. ExPASy TrEMBL
Match: A0A5A7UP94 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold126G00190 PE=4 SV=1)

HSP 1 Score: 1277.3 bits (3304), Expect = 0.0e+00
Identity = 631/647 (97.53%), Postives = 636/647 (98.30%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 98  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 157

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIVMSFGLT 120
           YPLPRIDDLFDQLQGATVFSKIDLRSG HQLRIKDED+PKTAFRSRYGHYEFIVMSFGLT
Sbjct: 158 YPLPRIDDLFDQLQGATVFSKIDLRSGCHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 217

Query: 121 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
           NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS
Sbjct: 218 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 277

Query: 181 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWARPSTVSEVRSFLGLAGYYRRFVENF 240
           KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW RPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 278 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 337

Query: 241 SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 300
           SR ATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSG+FVIYSDASKKGL
Sbjct: 338 SRTATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 397

Query: 301 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360
           GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 398 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 457

Query: 361 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 420
           KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR
Sbjct: 458 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 517

Query: 421 DLERAEIAVSVGTVTMQLAQLTVQPTLRQRIIDAQNNDPYLVEKRGLAEAGQTAEFSLSS 480
           DLERAEIAVSVG VTMQLAQLTVQPTLRQRIIDAQ+NDPYLVEKRGLAEAGQ  EFSLSS
Sbjct: 518 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSS 577

Query: 481 DGGLLFERRFCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 540
           DGGLLFERR CVPSDSAVKTELL+EAHSSPFSMHPGSTKMYQDLKR+YWWRNMKREVAEF
Sbjct: 578 DGGLLFERRLCVPSDSAVKTELLAEAHSSPFSMHPGSTKMYQDLKRIYWWRNMKREVAEF 637

Query: 541 VSKCLVCQQVKAPRQKPAGLLQPLCIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 600
           VSKCLVCQQVKAPRQKPAGLLQPL IPEWKWENVSMDFI GLPRTLRGFTVIWVVVDRLT
Sbjct: 638 VSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFIAGLPRTLRGFTVIWVVVDRLT 697

Query: 601 KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 648
           KSAHFVPGKSTYT SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF
Sbjct: 698 KSAHFVPGKSTYTTSKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 744

[Close]

BLAST of Cmc02g0043021 vs. ExPASy TrEMBL
Match: A0A5A7TW75 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1202G00130 PE=4 SV=1)

HSP 1 Score: 1275.4 bits (3299), Expect = 0.0e+00
Identity = 629/647 (97.22%), Postives = 637/647 (98.45%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60
           MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI+YRELNKVTVKNR
Sbjct: 122 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIEYRELNKVTVKNR 181

Query: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHYEFIVMSFGLT 120
           YPLPRIDDLFDQLQGATVFS+IDLRSGYHQLRIKDED+PKTAFRSRYGHYEFIVMSFGLT
Sbjct: 182 YPLPRIDDLFDQLQGATVFSRIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 241

Query: 121 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
           NAPA FMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFS
Sbjct: 242 NAPAEFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFS 301

Query: 181 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWARPSTVSEVRSFLGLAGYYRRFVENF 240
           KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGW RPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 302 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 361

Query: 241 SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGL 300
           SRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSG+FVIYSDASKKGL
Sbjct: 362 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 421

Query: 301 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360
           GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 422 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 481

Query: 361 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 420
           KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR
Sbjct: 482 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 541

Query: 421 DLERAEIAVSVGTVTMQLAQLTVQPTLRQRIIDAQNNDPYLVEKRGLAEAGQTAEFSLSS 480
           DLER EIAVSVG VTMQLAQLTVQPTLRQRIIDAQ+NDPYLVEKRGLAEAGQ  EFSLSS
Sbjct: 542 DLERTEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSS 601

Query: 481 DGGLLFERRFCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 540
           DGGLLFERR CVPSDSAVKTELLSEAH SPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF
Sbjct: 602 DGGLLFERRLCVPSDSAVKTELLSEAHGSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 661

Query: 541 VSKCLVCQQVKAPRQKPAGLLQPLCIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 600
           VS+CLVCQQVKAPRQKPAGLLQPL IPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT
Sbjct: 662 VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 721

Query: 601 KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 648
           KSAHFVPGKSTYTAS+WAQLYMSEIVRLHGVPVSIVSDRDARFTSKF
Sbjct: 722 KSAHFVPGKSTYTASEWAQLYMSEIVRLHGVPVSIVSDRDARFTSKF 768

[Close]

BLAST of Cmc02g0043021 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 122.1 bits (305), Expect = 1.7e-27
Identity = 58/125 (46.40%), Postives = 81/125 (64.80%), Query Frame = 0


Query: 162 HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTGWARPST 221
           HL MVLQ    ++ YA   KC F   Q+++LG  H++S  GVS DPAK+EA+ GW  P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 222 VSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPV 281
            +E+R FLGL GYYRRFV+N+ +I  PLT+L +K +   W++    +F+ LK  + T PV
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS-LKWTEMAALAFKALKGAVTTLPV 122

Query: 282 LTVPD 285
           L +PD
Sbjct: 123 LALPD 126

The following BLAST results are available for this feature:

BLAST of Cmc02g0043021 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK01613.1	0.0e+00	98.92	pol protein [Cucumis melo var. makuwa]	[more]
KAA0048687.1	0.0e+00	97.84	pol protein [Cucumis melo var. makuwa]	[more]
KAA0058399.1	0.0e+00	97.68	pol protein [Cucumis melo var. makuwa]	[more]
KAA0057672.1	0.0e+00	97.53	pol protein [Cucumis melo var. makuwa]	[more]
KAA0045479.1	0.0e+00	97.22	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc02g0043021 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CT41	8.3e-109	33.33	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	8.3e-109	33.33	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	8.3e-109	33.33	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	8.3e-109	33.33	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT37	8.3e-109	33.33	Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc02g0043021 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BPI1	0.0e+00	98.92	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45...	[more]
A0A5A7U330	0.0e+00	97.84	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43...	[more]
A0A5A7UY04	0.0e+00	97.68	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold40...	[more]
A0A5A7UP94	0.0e+00	97.53	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold126G00190 PE...	[more]
A0A5A7TW75	0.0e+00	97.22	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1202G00130 P...	[more]

BLAST of Cmc02g0043021 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	1.7e-27	46.40	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 561..647 e-value: 1.3E-15 score: 59.2
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 61..196 e-value: 2.4E-88 score: 297.0
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 206..297 e-value: 7.5E-31 score: 108.0
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 36..195 e-value: 4.2E-29 score: 101.6
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 17..196 score: 11.437992
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 1..121 e-value: 2.4E-88 score: 297.0
None	No IPR available	GENE3D	1.10.340.70		coord: 461..551 e-value: 8.7E-18 score: 66.4
None	No IPR available	PANTHER	PTHR34072	ENZYMATIC POLYPROTEIN-RELATED	coord: 13..646
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 290..405 e-value: 5.4132E-59 score: 191.937
None	No IPR available	CDD	cd01647	RT_LTR	coord: 20..196 e-value: 2.12472E-98 score: 296.814
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 287..383 e-value: 2.2E-34 score: 117.9
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 496..552 e-value: 2.9E-17 score: 62.5
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 563..647 score: 9.082294
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..389
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 564..646

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc02g0043021.1	Cmc02g0043021.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003676	nucleic acid binding