Cmc02g0042901 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc02g0042901
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr02: 4851508 .. 4852407 (+)
RNA-Seq Expression	Cmc02g0042901
Synteny	Cmc02g0042901

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTTAAGAACGGATATCCCTTGCCCAGGATCGACGATCTATTTGACCAGTTACAGGGAGCTACAGTTTTCTCTAAGATTGATCTTCGGTCGGGATATCATCAGCTGAGGATTAAGGATGGTGATGTACCGAAGACAGCATTTCGTTCCAGATATGGACACTATGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGAGAGTTCCTAGATACTTTTGTGATCGTGTTTATTGATGATATCTTGATATACTCCAAGACGGAGGCCGAACATGAGGAGCATTTACGTATAGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCTTTTCTAGGCCATGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCAACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACGAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAACAAGGTAAGGTGGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATAG

mRNA sequence

ATGCGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTTAAGAACGGATATCCCTTGCCCAGGATCGACGATCTATTTGACCAGTTACAGGGAGCTACAGTTTTCTCTAAGATTGATCTTCGGTCGGGATATCATCAGCTGAGGATTAAGGATGGTGATGTACCGAAGACAGCATTTCGTTCCAGATATGGACACTATGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGAGAGTTCCTAGATACTTTTGTGATCGTGTTTATTGATGATATCTTGATATACTCCAAGACGGAGGCCGAACATGAGGAGCATTTACGTATAGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCTTTTCTAGGCCATGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCAACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACGAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAACAAGGTAAGGTGGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATAG

Coding sequence (CDS)

ATGCGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTTAAGAACGGATATCCCTTGCCCAGGATCGACGATCTATTTGACCAGTTACAGGGAGCTACAGTTTTCTCTAAGATTGATCTTCGGTCGGGATATCATCAGCTGAGGATTAAGGATGGTGATGTACCGAAGACAGCATTTCGTTCCAGATATGGACACTATGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGAGAGTTCCTAGATACTTTTGTGATCGTGTTTATTGATGATATCTTGATATACTCCAAGACGGAGGCCGAACATGAGGAGCATTTACGTATAGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCTTTTCTAGGCCATGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCAACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACGAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAACAAGGTAAGGTGGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATAG

Protein sequence

MRLCIDYRELNKVTVKNGYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYQRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI

Homology

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BLAST of Cmc02g0042901 vs. NCBI nr
Match: KAA0026271.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 600.9 bits (1548), Expect = 6.0e-168
Identity = 297/299 (99.33%), Postives = 298/299 (99.67%), Query Frame = 0


Query: 1   MRLCIDYRELNKVTVKNGYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTA 60
           MRLCIDYRELNKVTVKN YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTA
Sbjct: 191 MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTA 250

Query: 61  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
           FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH
Sbjct: 251 FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 310

Query: 121 LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
           LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE
Sbjct: 311 LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 370

Query: 181 VRSFLGLAGYYQRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 240
           VRSFLGLAGYY+RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV
Sbjct: 371 VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 430

Query: 241 PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI 300
           PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI
Sbjct: 431 PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI 489

[Close]

BLAST of Cmc02g0042901 vs. NCBI nr
Match: KAA0033251.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 597.8 bits (1540), Expect = 5.1e-167
Identity = 295/299 (98.66%), Postives = 297/299 (99.33%), Query Frame = 0


Query: 1   MRLCIDYRELNKVTVKNGYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTA 60
           MRLCIDYRELNKVTVKN YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTA
Sbjct: 388 MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTA 447

Query: 61  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
           FRSRYGHYEFIVMSFGLTNAP VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEH+EH
Sbjct: 448 FRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHKEH 507

Query: 121 LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
           LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE
Sbjct: 508 LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 567

Query: 181 VRSFLGLAGYYQRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 240
           VRSFLGLAGYY+RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV
Sbjct: 568 VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 627

Query: 241 PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI 300
           PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI
Sbjct: 628 PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI 686

[Close]

BLAST of Cmc02g0042901 vs. NCBI nr
Match: KAA0051051.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 597.0 bits (1538), Expect = 8.7e-167
Identity = 295/299 (98.66%), Postives = 297/299 (99.33%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNGYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTA 60
            MRLCIDYRELNKVTVKN YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIK+GDVPKTA
Sbjct: 749  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKEGDVPKTA 808

Query: 61   FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
            FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH
Sbjct: 809  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 868

Query: 121  LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
            LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE
Sbjct: 869  LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 928

Query: 181  VRSFLGLAGYYQRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 240
            VRSFLGLAGYY+RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV
Sbjct: 929  VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 988

Query: 241  PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI 300
            PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQ YPTHDLELAAVVFALKI
Sbjct: 989  PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQKYPTHDLELAAVVFALKI 1047

[Close]

BLAST of Cmc02g0042901 vs. NCBI nr
Match: KAA0048687.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 596.7 bits (1537), Expect = 1.1e-166
Identity = 295/299 (98.66%), Postives = 297/299 (99.33%), Query Frame = 0


Query: 1   MRLCIDYRELNKVTVKNGYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTA 60
           MRLCIDYRELNKVTVKN YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTA
Sbjct: 622 MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 681

Query: 61  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
           FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH
Sbjct: 682 FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 741

Query: 121 LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
           LR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE
Sbjct: 742 LRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 801

Query: 181 VRSFLGLAGYYQRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 240
           VRSFLGLAGYY+RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV
Sbjct: 802 VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 861

Query: 241 PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI 300
           PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI
Sbjct: 862 PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI 920

[Close]

BLAST of Cmc02g0042901 vs. NCBI nr
Match: KAA0050009.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 596.3 bits (1536), Expect = 1.5e-166
Identity = 294/299 (98.33%), Postives = 296/299 (99.00%), Query Frame = 0


Query: 1   MRLCIDYRELNKVTVKNGYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTA 60
           MRLCIDYRELNKVTVKN YPLPRIDDLFDQLQGATVF KIDLRSGYHQLRIKDGDVPKTA
Sbjct: 1   MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFCKIDLRSGYHQLRIKDGDVPKTA 60

Query: 61  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
           FRSRYGHYEFIVMSF LTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH
Sbjct: 61  FRSRYGHYEFIVMSFSLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120

Query: 121 LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
           LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE
Sbjct: 121 LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180

Query: 181 VRSFLGLAGYYQRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 240
           VRSFLGLAGYY+RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKL+TAPVLTV
Sbjct: 181 VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLITAPVLTV 240

Query: 241 PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI 300
           PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI
Sbjct: 241 PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI 299

[Close]

BLAST of Cmc02g0042901 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 2.6e-65
Identity = 116/298 (38.93%), Postives = 184/298 (61.74%), Query Frame = 0


Query: 2   RLCIDYRELNKVTVKNGYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAF 61
           R+ IDYR+LN++T+ + YP+P +D++  +L     F+ IDL  G+HQ+ + +  + KTAF
Sbjct: 262 RVVIDYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAF 321

Query: 62  RSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHL 121
            ++ GHYE++ M FGL NAPA F   MN + R  L+   +V++DDI+I+S +  EH   +
Sbjct: 322 STKSGHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSI 381

Query: 122 RIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEV 181
           ++V   L D  L  +  KCEF  K+ +FLGH+V+  G+  +P K++A+  +  P+   E+
Sbjct: 382 QLVFTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEI 441

Query: 182 RSFLGLAGYYQRFVENFSRIATPLTQLTRKGAPFVWSK-ACEDSFQNLKQKLVTAPVLTV 241
           R+FLGL GYY++F+ N++ IA P+T   +K       K    ++F+ LK  ++  P+L +
Sbjct: 442 RAFLGLTGYYRKFIPNYADIAKPMTSCLKKRTKIDTQKLEYIEAFEKLKALIIRDPILQL 501

Query: 242 PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALK 299
           PD    FV+ +DAS   LG VL Q G  +++ SR L  HE NY   + EL A+V+A K
Sbjct: 502 PDFEKKFVLTTDASNLALGAVLSQNGHPISFISRTLNDHELNYSAIEKELLAIVWATK 559

[Close]

BLAST of Cmc02g0042901 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 2.9e-64
Identity = 120/298 (40.27%), Postives = 185/298 (62.08%), Query Frame = 0


Query: 2   RLCIDYRELNKVTVKNGYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAF 61
           R+ IDYR+LN++TV + +P+P +D++  +L     F+ IDL  G+HQ+ +    V KTAF
Sbjct: 263 RIVIDYRKLNEITVGDRHPIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAF 322

Query: 62  RSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHL 121
            +++GHYE++ M FGL NAPA F   MN + R  L+   +V++DDI+++S +  EH + L
Sbjct: 323 STKHGHYEYLRMPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSL 382

Query: 122 RIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEV 181
            +V + L    L  +  KCEF  ++ +FLGHV++  G+  +P KIEA+  +  P+   E+
Sbjct: 383 GLVFEKLAKANLKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEI 442

Query: 182 RSFLGLAGYYQRFVENFSRIATPLTQLTRKGAPFVWSKACEDS-FQNLKQKLVTAPVLTV 241
           ++FLGL GYY++F+ NF+ IA P+T+  +K      +    DS F+ LK  +   P+L V
Sbjct: 443 KAFLGLTGYYRKFIPNFADIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKV 502

Query: 242 PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALK 299
           PD +  F + +DAS   LG VL Q G  ++Y SR L  HE NY T + EL A+V+A K
Sbjct: 503 PDFTKKFTLTTDASDVALGAVLSQDGHPLSYISRTLNEHEINYSTIEKELLAIVWATK 560

[Close]

BLAST of Cmc02g0042901 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 5.3e-58
Identity = 112/303 (36.96%), Postives = 181/303 (59.74%), Query Frame = 0


Query: 1   MRLCIDYRELNKVTVKNGYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTA 60
           +R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K A
Sbjct: 462 LRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLA 521

Query: 61  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
           FR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H
Sbjct: 522 FRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKH 581

Query: 121 LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
           ++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E
Sbjct: 582 VKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKE 641

Query: 181 VRSFLGLAGYYQRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 240
           +R FLG   Y ++F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL  
Sbjct: 642 LRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701

Query: 241 PDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF 299
            D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Sbjct: 702 FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761

[Close]

BLAST of Cmc02g0042901 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 5.3e-58
Identity = 112/303 (36.96%), Postives = 181/303 (59.74%), Query Frame = 0


Query: 1   MRLCIDYRELNKVTVKNGYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTA 60
           +R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K A
Sbjct: 462 LRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLA 521

Query: 61  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
           FR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H
Sbjct: 522 FRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKH 581

Query: 121 LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
           ++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E
Sbjct: 582 VKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKE 641

Query: 181 VRSFLGLAGYYQRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 240
           +R FLG   Y ++F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL  
Sbjct: 642 LRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701

Query: 241 PDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF 299
            D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Sbjct: 702 FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761

[Close]

BLAST of Cmc02g0042901 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 5.3e-58
Identity = 112/303 (36.96%), Postives = 181/303 (59.74%), Query Frame = 0


Query: 1   MRLCIDYRELNKVTVKNGYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTA 60
           +R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K A
Sbjct: 462 LRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLA 521

Query: 61  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
           FR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H
Sbjct: 522 FRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKH 581

Query: 121 LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
           ++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E
Sbjct: 582 VKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKE 641

Query: 181 VRSFLGLAGYYQRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 240
           +R FLG   Y ++F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL  
Sbjct: 642 LRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701

Query: 241 PDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF 299
            D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Sbjct: 702 FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761

[Close]

BLAST of Cmc02g0042901 vs. ExPASy TrEMBL
Match: A0A5A7SPZ2 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G002730 PE=4 SV=1)

HSP 1 Score: 600.9 bits (1548), Expect = 2.9e-168
Identity = 297/299 (99.33%), Postives = 298/299 (99.67%), Query Frame = 0


Query: 1   MRLCIDYRELNKVTVKNGYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTA 60
           MRLCIDYRELNKVTVKN YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTA
Sbjct: 191 MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTA 250

Query: 61  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
           FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH
Sbjct: 251 FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 310

Query: 121 LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
           LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE
Sbjct: 311 LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 370

Query: 181 VRSFLGLAGYYQRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 240
           VRSFLGLAGYY+RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV
Sbjct: 371 VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 430

Query: 241 PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI 300
           PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI
Sbjct: 431 PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI 489

[Close]

BLAST of Cmc02g0042901 vs. ExPASy TrEMBL
Match: A0A5A7SUW2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold845G00470 PE=4 SV=1)

HSP 1 Score: 597.8 bits (1540), Expect = 2.5e-167
Identity = 295/299 (98.66%), Postives = 297/299 (99.33%), Query Frame = 0


Query: 1   MRLCIDYRELNKVTVKNGYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTA 60
           MRLCIDYRELNKVTVKN YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTA
Sbjct: 388 MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTA 447

Query: 61  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
           FRSRYGHYEFIVMSFGLTNAP VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEH+EH
Sbjct: 448 FRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHKEH 507

Query: 121 LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
           LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE
Sbjct: 508 LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 567

Query: 181 VRSFLGLAGYYQRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 240
           VRSFLGLAGYY+RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV
Sbjct: 568 VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 627

Query: 241 PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI 300
           PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI
Sbjct: 628 PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI 686

[Close]

BLAST of Cmc02g0042901 vs. ExPASy TrEMBL
Match: A0A5A7UC07 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold678G00040 PE=4 SV=1)

HSP 1 Score: 597.0 bits (1538), Expect = 4.2e-167
Identity = 295/299 (98.66%), Postives = 297/299 (99.33%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNGYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTA 60
            MRLCIDYRELNKVTVKN YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIK+GDVPKTA
Sbjct: 749  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKEGDVPKTA 808

Query: 61   FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
            FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH
Sbjct: 809  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 868

Query: 121  LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
            LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE
Sbjct: 869  LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 928

Query: 181  VRSFLGLAGYYQRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 240
            VRSFLGLAGYY+RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV
Sbjct: 929  VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 988

Query: 241  PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI 300
            PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQ YPTHDLELAAVVFALKI
Sbjct: 989  PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQKYPTHDLELAAVVFALKI 1047

[Close]

BLAST of Cmc02g0042901 vs. ExPASy TrEMBL
Match: A0A5A7U330 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00040 PE=4 SV=1)

HSP 1 Score: 596.7 bits (1537), Expect = 5.5e-167
Identity = 295/299 (98.66%), Postives = 297/299 (99.33%), Query Frame = 0


Query: 1   MRLCIDYRELNKVTVKNGYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTA 60
           MRLCIDYRELNKVTVKN YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTA
Sbjct: 622 MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 681

Query: 61  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
           FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH
Sbjct: 682 FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 741

Query: 121 LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
           LR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE
Sbjct: 742 LRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 801

Query: 181 VRSFLGLAGYYQRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 240
           VRSFLGLAGYY+RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV
Sbjct: 802 VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 861

Query: 241 PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI 300
           PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI
Sbjct: 862 PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI 920

[Close]

BLAST of Cmc02g0042901 vs. ExPASy TrEMBL
Match: A0A5A7U943 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13G001930 PE=4 SV=1)

HSP 1 Score: 596.3 bits (1536), Expect = 7.2e-167
Identity = 294/299 (98.33%), Postives = 296/299 (99.00%), Query Frame = 0


Query: 1   MRLCIDYRELNKVTVKNGYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTA 60
           MRLCIDYRELNKVTVKN YPLPRIDDLFDQLQGATVF KIDLRSGYHQLRIKDGDVPKTA
Sbjct: 1   MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFCKIDLRSGYHQLRIKDGDVPKTA 60

Query: 61  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
           FRSRYGHYEFIVMSF LTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH
Sbjct: 61  FRSRYGHYEFIVMSFSLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120

Query: 121 LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
           LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE
Sbjct: 121 LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180

Query: 181 VRSFLGLAGYYQRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 240
           VRSFLGLAGYY+RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKL+TAPVLTV
Sbjct: 181 VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLITAPVLTV 240

Query: 241 PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI 300
           PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI
Sbjct: 241 PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI 299

[Close]

BLAST of Cmc02g0042901 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 119.4 bits (298), Expect = 4.9e-27
Identity = 58/131 (44.27%), Postives = 83/131 (63.36%), Query Frame = 0


Query: 120 HLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPST 179
           HL +VLQ    ++ YA   KC F   Q+++LG  H++S  GVS DPAK+EA+ GW  P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 180 VSEVRSFLGLAGYYQRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPV 239
            +E+R FLGL GYY+RFV+N+ +I  PLT+L +K +   W++    +F+ LK  + T PV
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS-LKWTEMAALAFKALKGAVTTLPV 122

Query: 240 LTVPDGSGSFV 249
           L +PD    FV
Sbjct: 123 LALPDLKLPFV 132

The following BLAST results are available for this feature:

BLAST of Cmc02g0042901 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0026271.1	6.0e-168	99.33	pol protein [Cucumis melo var. makuwa]	[more]
KAA0033251.1	5.1e-167	98.66	pol protein [Cucumis melo var. makuwa]	[more]
KAA0051051.1	8.7e-167	98.66	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0048687.1	1.1e-166	98.66	pol protein [Cucumis melo var. makuwa]	[more]
KAA0050009.1	1.5e-166	98.33	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc02g0042901 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P20825	2.6e-65	38.93	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P04323	2.9e-64	40.27	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P0CT41	5.3e-58	36.96	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	5.3e-58	36.96	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	5.3e-58	36.96	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc02g0042901 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SPZ2	2.9e-168	99.33	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G002730 PE...	[more]
A0A5A7SUW2	2.5e-167	98.66	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84...	[more]
A0A5A7UC07	4.2e-167	98.66	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67...	[more]
A0A5A7U330	5.5e-167	98.66	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43...	[more]
A0A5A7U943	7.2e-167	98.33	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13G001930 PE...	[more]

BLAST of Cmc02g0042901 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	4.9e-27	44.27	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR041577	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	PFAM	PF17919	RT_RNaseH_2	coord: 217..298 e-value: 1.2E-26 score: 92.6
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 164..254 e-value: 9.8E-31 score: 107.6
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 19..154 e-value: 4.4E-68 score: 230.8
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 1..79 e-value: 4.4E-68 score: 230.8
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 2..298
None	No IPR available	PANTHER	PTHR24559:SF324	TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 2..298
None	No IPR available	CDD	cd01647	RT_LTR	coord: 2..154 e-value: 6.02597E-84 score: 248.279
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 3..153 e-value: 1.4E-26 score: 93.4
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 1..154 score: 10.597533
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 1..298

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc02g0042901.1	Cmc02g0042901.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
cellular_component	GO:0016020	membrane
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding