Cmc02g0042841 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc02g0042841
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr02: 4748020 .. 4749726 (-)
RNA-Seq Expression	Cmc02g0042841
Synteny	Cmc02g0042841

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCCCGCAGAGCTGAAAGAACTGAAGGTGCAGTTACAGGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTATTCGTTAAGAAGAAGGATGGATTGATGCGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTAAAGAACAGATATCCCTTGCCCAGGATTCACGATCTATTTGACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGATGATGTACCAAAGACAGCATTTCGTTCCAGGTATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAATAGAGTGTTTAAGGAGTTCCTAGATACTTTTGTGATCGTGTTTATCGACGATATCTTGATATACTCCAAGACGGAGGCCGAACATGAGGAGCATTTACGTATGGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTCTGGCTGAAGCAGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGATTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGAAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTTTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAGCAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTATTTATATGGTGAAAAGATACAGATATTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTATGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCGGCAGCACTTATTACCCGACAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTCACTATGCAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGAAAGCGGTTGAGTTCTCATTATCCTCTGATGGTGGACTTTTGTTTGAGAGACGCCTCTGTGTGCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAAGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATAG

mRNA sequence

ATGGCCCCCGCAGAGCTGAAAGAACTGAAGGTGCAGTTACAGGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTATTCGTTAAGAAGAAGGATGGATTGATGCGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTAAAGAACAGATATCCCTTGCCCAGGATTCACGATCTATTTGACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGATGATGTACCAAAGACAGCATTTCGTTCCAGGTATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAATAGAGTGTTTAAGGAGTTCCTAGATACTTTTGTGATCGTGTTTATCGACGATATCTTGATATACTCCAAGACGGAGGCCGAACATGAGGAGCATTTACGTATGGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTCTGGCTGAAGCAGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGATTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGAAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTTTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAGCAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTATTTATATGGTGAAAAGATACAGATATTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTATGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCGGCAGCACTTATTACCCGACAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTCACTATGCAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGAAAGCGGTTGAGTTCTCATTATCCTCTGATGGTGGACTTTTGTTTGAGAGACGCCTCTGTGTGCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAAGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATAG

Coding sequence (CDS)

ATGGCCCCCGCAGAGCTGAAAGAACTGAAGGTGCAGTTACAGGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTATTCGTTAAGAAGAAGGATGGATTGATGCGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTAAAGAACAGATATCCCTTGCCCAGGATTCACGATCTATTTGACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGATGATGTACCAAAGACAGCATTTCGTTCCAGGTATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAATAGAGTGTTTAAGGAGTTCCTAGATACTTTTGTGATCGTGTTTATCGACGATATCTTGATATACTCCAAGACGGAGGCCGAACATGAGGAGCATTTACGTATGGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTCTGGCTGAAGCAGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGATTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGAAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTTTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAGCAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTATTTATATGGTGAAAAGATACAGATATTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTATGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCGGCAGCACTTATTACCCGACAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTCACTATGCAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGAAAGCGGTTGAGTTCTCATTATCCTCTGATGGTGGACTTTTGTTTGAGAGACGCCTCTGTGTGCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAAGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATAG

Protein sequence

MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGLMRLCIDYRELNKVTVKNRYPLPRIHDLFDQLQGATVFSKIDLRSGYHQLRIKDDDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKEFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRRFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFLIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDYEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGKAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPE

Homology

[Close]

BLAST of Cmc02g0042841 vs. NCBI nr
Match: KAA0048687.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1117.1 bits (2888), Expect = 0.0e+00
Identity = 557/568 (98.06%), Postives = 563/568 (99.12%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGLMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDG MRLCIDYRELNKVTVKNR
Sbjct: 580  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 639

Query: 61   YPLPRIHDLFDQLQGATVFSKIDLRSGYHQLRIKDDDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRI DLFDQLQGATVFSKIDLRSGYHQLRIKD+DVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 640  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 699

Query: 121  NAPAVFMDLMNRVFKEFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVF+EFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS
Sbjct: 700  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 759

Query: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRRFLGLAGYYRRFVENF 240
            KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVR FLGLAGYYRRFVENF
Sbjct: 760  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 819

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFLIYSDASKKGL 300
            SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSF+IYSDASKKGL
Sbjct: 820  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 879

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 880  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 939

Query: 361  KYFFTQKELNMRQRRWLELVKDYDYEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 420
            KYFFTQKELNMRQRRWLELVKDYD EILYHPGKANVVADALSRKVSHSAALITRQAPLHR
Sbjct: 940  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 999

Query: 421  DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGKAVEFSLSS 480
            DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAG+AVEFSLSS
Sbjct: 1000 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSS 1059

Query: 481  DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 540
            DGGLLFERRLCVPSDS VKTELLSEAHSSPFSMHPGSTKMY+D+KRVYWWRNMKREVAEF
Sbjct: 1060 DGGLLFERRLCVPSDSVVKTELLSEAHSSPFSMHPGSTKMYRDVKRVYWWRNMKREVAEF 1119

Query: 541  VSRCLVCQQVKAPRQKPAGLLQPLSIPE 569
            VSRCLVCQQVKAPRQKPAGLLQPLSIPE
Sbjct: 1120 VSRCLVCQQVKAPRQKPAGLLQPLSIPE 1147

[Close]

BLAST of Cmc02g0042841 vs. NCBI nr
Match: TYK01613.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1114.8 bits (2882), Expect = 0.0e+00
Identity = 556/568 (97.89%), Postives = 561/568 (98.77%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGLMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDG MRLCIDYRELNKVTVKNR
Sbjct: 834  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 893

Query: 61   YPLPRIHDLFDQLQGATVFSKIDLRSGYHQLRIKDDDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRI DLFDQLQGATVFSKIDLRSGYHQLRIKD+DVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 894  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 953

Query: 121  NAPAVFMDLMNRVFKEFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVF+EFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS
Sbjct: 954  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 1013

Query: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRRFLGLAGYYRRFVENF 240
            KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVR FLGLAGYYRRFVENF
Sbjct: 1014 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 1073

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFLIYSDASKKGL 300
            SRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSF+IYSDASKKGL
Sbjct: 1074 SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 1133

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 1134 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 1193

Query: 361  KYFFTQKELNMRQRRWLELVKDYDYEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 420
            KYFFTQKELNMRQRRWLELVKDYD EILYHPGKANVVADALSRKVSHSAALITRQAPLHR
Sbjct: 1194 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 1253

Query: 421  DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGKAVEFSLSS 480
            DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAG+  EFSLSS
Sbjct: 1254 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSS 1313

Query: 481  DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 540
            DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF
Sbjct: 1314 DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 1373

Query: 541  VSRCLVCQQVKAPRQKPAGLLQPLSIPE 569
            VS+CLVCQQVKAPRQKPAGLLQPLSIPE
Sbjct: 1374 VSKCLVCQQVKAPRQKPAGLLQPLSIPE 1401

[Close]

BLAST of Cmc02g0042841 vs. NCBI nr
Match: KAA0037244.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 1114.4 bits (2881), Expect = 0.0e+00
Identity = 555/568 (97.71%), Postives = 561/568 (98.77%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGLMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDG MRLCIDYRELNKVTVKNR
Sbjct: 614  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 673

Query: 61   YPLPRIHDLFDQLQGATVFSKIDLRSGYHQLRIKDDDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRI DLFDQLQGATVFSKIDLRSGYHQLRIKD+DVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 674  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 733

Query: 121  NAPAVFMDLMNRVFKEFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVF+EFLDTFVIVFIDDILIYSKTE EHEEHLRMVLQTLRDNKLYAKF 
Sbjct: 734  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLQTLRDNKLYAKFL 793

Query: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRRFLGLAGYYRRFVENF 240
            KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVR FLGLAGYYRRFVENF
Sbjct: 794  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 853

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFLIYSDASKKGL 300
            SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSF+IYSDASKKGL
Sbjct: 854  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 913

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 914  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 973

Query: 361  KYFFTQKELNMRQRRWLELVKDYDYEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 420
            KYFFTQKELNMRQRRWLELVKDYD EILYHPGKANVVADALSRKVSHSAALITRQAPLHR
Sbjct: 974  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 1033

Query: 421  DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGKAVEFSLSS 480
            DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAE G+AVEFSLSS
Sbjct: 1034 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEVGQAVEFSLSS 1093

Query: 481  DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 540
            DGGLLFERRLCVPSDSA+KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF
Sbjct: 1094 DGGLLFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 1153

Query: 541  VSRCLVCQQVKAPRQKPAGLLQPLSIPE 569
            VS+CLVCQQVKAPRQKPAGLLQPLSIPE
Sbjct: 1154 VSKCLVCQQVKAPRQKPAGLLQPLSIPE 1181

[Close]

BLAST of Cmc02g0042841 vs. NCBI nr
Match: KAA0057672.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1113.2 bits (2878), Expect = 0.0e+00
Identity = 555/568 (97.71%), Postives = 562/568 (98.94%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGLMRLCIDYRELNKVTVKNR 60
           MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDG MRLCIDYRELNKVTVKNR
Sbjct: 98  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 157

Query: 61  YPLPRIHDLFDQLQGATVFSKIDLRSGYHQLRIKDDDVPKTAFRSRYGHYEFIVMSFGLT 120
           YPLPRI DLFDQLQGATVFSKIDLRSG HQLRIKD+DVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 158 YPLPRIDDLFDQLQGATVFSKIDLRSGCHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 217

Query: 121 NAPAVFMDLMNRVFKEFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
           NAPAVFMDLMNRVF+EFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS
Sbjct: 218 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 277

Query: 181 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRRFLGLAGYYRRFVENF 240
           KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVR FLGLAGYYRRFVENF
Sbjct: 278 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 337

Query: 241 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFLIYSDASKKGL 300
           SR ATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSF+IYSDASKKGL
Sbjct: 338 SRTATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 397

Query: 301 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360
           GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 398 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 457

Query: 361 KYFFTQKELNMRQRRWLELVKDYDYEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 420
           KYFFTQKELNMRQRRWLELVKDYD EILYHPGKANVVADALSRKVSHSAALITRQAPLHR
Sbjct: 458 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 517

Query: 421 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGKAVEFSLSS 480
           DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAG+AVEFSLSS
Sbjct: 518 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSS 577

Query: 481 DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 540
           DGGLLFERRLCVPSDSAVKTELL+EAHSSPFSMHPGSTKMYQDLKR+YWWRNMKREVAEF
Sbjct: 578 DGGLLFERRLCVPSDSAVKTELLAEAHSSPFSMHPGSTKMYQDLKRIYWWRNMKREVAEF 637

Query: 541 VSRCLVCQQVKAPRQKPAGLLQPLSIPE 569
           VS+CLVCQQVKAPRQKPAGLLQPLSIPE
Sbjct: 638 VSKCLVCQQVKAPRQKPAGLLQPLSIPE 665

[Close]

BLAST of Cmc02g0042841 vs. NCBI nr
Match: KAA0045479.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1111.7 bits (2874), Expect = 0.0e+00
Identity = 554/568 (97.54%), Postives = 561/568 (98.77%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGLMRLCIDYRELNKVTVKNR 60
           MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDG MRLCI+YRELNKVTVKNR
Sbjct: 122 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIEYRELNKVTVKNR 181

Query: 61  YPLPRIHDLFDQLQGATVFSKIDLRSGYHQLRIKDDDVPKTAFRSRYGHYEFIVMSFGLT 120
           YPLPRI DLFDQLQGATVFS+IDLRSGYHQLRIKD+DVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 182 YPLPRIDDLFDQLQGATVFSRIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 241

Query: 121 NAPAVFMDLMNRVFKEFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
           NAPA FMDLMNRVF+EFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFS
Sbjct: 242 NAPAEFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFS 301

Query: 181 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRRFLGLAGYYRRFVENF 240
           KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVR FLGLAGYYRRFVENF
Sbjct: 302 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 361

Query: 241 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFLIYSDASKKGL 300
           SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSF+IYSDASKKGL
Sbjct: 362 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 421

Query: 301 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360
           GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 422 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 481

Query: 361 KYFFTQKELNMRQRRWLELVKDYDYEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 420
           KYFFTQKELNMRQRRWLELVKDYD EILYHPGKANVVADALSRKVSHSAALITRQAPLHR
Sbjct: 482 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 541

Query: 421 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGKAVEFSLSS 480
           DLER EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAG+AVEFSLSS
Sbjct: 542 DLERTEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSS 601

Query: 481 DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 540
           DGGLLFERRLCVPSDSAVKTELLSEAH SPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF
Sbjct: 602 DGGLLFERRLCVPSDSAVKTELLSEAHGSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 661

Query: 541 VSRCLVCQQVKAPRQKPAGLLQPLSIPE 569
           VSRCLVCQQVKAPRQKPAGLLQPLSIPE
Sbjct: 662 VSRCLVCQQVKAPRQKPAGLLQPLSIPE 689

[Close]

BLAST of Cmc02g0042841 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 1.9e-93
Identity = 191/575 (33.22%), Postives = 317/575 (55.13%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGLMRLCIDYRELNKVTVKNR 60
           + P +++ +  ++ + L  G IR S +    PV+FV KK+G +R+ +DY+ LNK    N 
Sbjct: 420 LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61  YPLPRIHDLFDQLQGATVFSKIDLRSGYHQLRIKDDDVPKTAFRSRYGHYEFIVMSFGLT 120
           YPLP I  L  ++QG+T+F+K+DL+S YH +R++  D  K AFR   G +E++VM +G++
Sbjct: 480 YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121 NAPAVFMDLMNRVFKEFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
            APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +
Sbjct: 540 TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRRFLGLAGYYRRFVENF 240
           KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R+FLG   Y R+F+   
Sbjct: 600 KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFLIYSDASKKGL 300
           S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   L+ +DAS   +
Sbjct: 660 SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301 GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQI 360
           G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I
Sbjct: 720 GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

Query: 361 FTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDYEILYHPGKANVVADALSRKVSHSAAL 420
            TDH++L    T +    N R  RW   ++D+++EI Y PG AN +ADALSR       +
Sbjct: 780 LTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------I 839

Query: 421 ITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAG 480
           +    P+ +D E   I          + Q+++    + +++   +ND  L+    L    
Sbjct: 840 VDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNED 899

Query: 481 KAVEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYW 540
           K VE ++    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + 
Sbjct: 900 KRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFT 959

Query: 541 WRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPL 565
           W+ +++++ E+V  C  CQ  K+   KP G LQP+
Sbjct: 960 WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPI 977

[Close]

BLAST of Cmc02g0042841 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 1.9e-93
Identity = 191/575 (33.22%), Postives = 317/575 (55.13%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGLMRLCIDYRELNKVTVKNR 60
           + P +++ +  ++ + L  G IR S +    PV+FV KK+G +R+ +DY+ LNK    N 
Sbjct: 420 LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61  YPLPRIHDLFDQLQGATVFSKIDLRSGYHQLRIKDDDVPKTAFRSRYGHYEFIVMSFGLT 120
           YPLP I  L  ++QG+T+F+K+DL+S YH +R++  D  K AFR   G +E++VM +G++
Sbjct: 480 YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121 NAPAVFMDLMNRVFKEFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
            APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +
Sbjct: 540 TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRRFLGLAGYYRRFVENF 240
           KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R+FLG   Y R+F+   
Sbjct: 600 KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFLIYSDASKKGL 300
           S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   L+ +DAS   +
Sbjct: 660 SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301 GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQI 360
           G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I
Sbjct: 720 GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

Query: 361 FTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDYEILYHPGKANVVADALSRKVSHSAAL 420
            TDH++L    T +    N R  RW   ++D+++EI Y PG AN +ADALSR       +
Sbjct: 780 LTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------I 839

Query: 421 ITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAG 480
           +    P+ +D E   I          + Q+++    + +++   +ND  L+    L    
Sbjct: 840 VDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNED 899

Query: 481 KAVEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYW 540
           K VE ++    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + 
Sbjct: 900 KRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFT 959

Query: 541 WRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPL 565
           W+ +++++ E+V  C  CQ  K+   KP G LQP+
Sbjct: 960 WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPI 977

[Close]

BLAST of Cmc02g0042841 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 1.9e-93
Identity = 191/575 (33.22%), Postives = 317/575 (55.13%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGLMRLCIDYRELNKVTVKNR 60
           + P +++ +  ++ + L  G IR S +    PV+FV KK+G +R+ +DY+ LNK    N 
Sbjct: 420 LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61  YPLPRIHDLFDQLQGATVFSKIDLRSGYHQLRIKDDDVPKTAFRSRYGHYEFIVMSFGLT 120
           YPLP I  L  ++QG+T+F+K+DL+S YH +R++  D  K AFR   G +E++VM +G++
Sbjct: 480 YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121 NAPAVFMDLMNRVFKEFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
            APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +
Sbjct: 540 TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRRFLGLAGYYRRFVENF 240
           KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R+FLG   Y R+F+   
Sbjct: 600 KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFLIYSDASKKGL 300
           S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   L+ +DAS   +
Sbjct: 660 SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301 GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQI 360
           G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I
Sbjct: 720 GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

Query: 361 FTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDYEILYHPGKANVVADALSRKVSHSAAL 420
            TDH++L    T +    N R  RW   ++D+++EI Y PG AN +ADALSR       +
Sbjct: 780 LTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------I 839

Query: 421 ITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAG 480
           +    P+ +D E   I          + Q+++    + +++   +ND  L+    L    
Sbjct: 840 VDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNED 899

Query: 481 KAVEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYW 540
           K VE ++    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + 
Sbjct: 900 KRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFT 959

Query: 541 WRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPL 565
           W+ +++++ E+V  C  CQ  K+   KP G LQP+
Sbjct: 960 WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPI 977

[Close]

BLAST of Cmc02g0042841 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 1.9e-93
Identity = 191/575 (33.22%), Postives = 317/575 (55.13%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGLMRLCIDYRELNKVTVKNR 60
           + P +++ +  ++ + L  G IR S +    PV+FV KK+G +R+ +DY+ LNK    N 
Sbjct: 420 LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61  YPLPRIHDLFDQLQGATVFSKIDLRSGYHQLRIKDDDVPKTAFRSRYGHYEFIVMSFGLT 120
           YPLP I  L  ++QG+T+F+K+DL+S YH +R++  D  K AFR   G +E++VM +G++
Sbjct: 480 YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121 NAPAVFMDLMNRVFKEFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
            APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +
Sbjct: 540 TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRRFLGLAGYYRRFVENF 240
           KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R+FLG   Y R+F+   
Sbjct: 600 KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFLIYSDASKKGL 300
           S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   L+ +DAS   +
Sbjct: 660 SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301 GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQI 360
           G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I
Sbjct: 720 GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

Query: 361 FTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDYEILYHPGKANVVADALSRKVSHSAAL 420
            TDH++L    T +    N R  RW   ++D+++EI Y PG AN +ADALSR       +
Sbjct: 780 LTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------I 839

Query: 421 ITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAG 480
           +    P+ +D E   I          + Q+++    + +++   +ND  L+    L    
Sbjct: 840 VDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNED 899

Query: 481 KAVEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYW 540
           K VE ++    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + 
Sbjct: 900 KRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFT 959

Query: 541 WRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPL 565
           W+ +++++ E+V  C  CQ  K+   KP G LQP+
Sbjct: 960 WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPI 977

[Close]

BLAST of Cmc02g0042841 vs. ExPASy Swiss-Prot
Match: P0CT37 (Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-4 PE=3 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 1.9e-93
Identity = 191/575 (33.22%), Postives = 317/575 (55.13%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGLMRLCIDYRELNKVTVKNR 60
           + P +++ +  ++ + L  G IR S +    PV+FV KK+G +R+ +DY+ LNK    N 
Sbjct: 420 LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61  YPLPRIHDLFDQLQGATVFSKIDLRSGYHQLRIKDDDVPKTAFRSRYGHYEFIVMSFGLT 120
           YPLP I  L  ++QG+T+F+K+DL+S YH +R++  D  K AFR   G +E++VM +G++
Sbjct: 480 YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121 NAPAVFMDLMNRVFKEFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
            APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +
Sbjct: 540 TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRRFLGLAGYYRRFVENF 240
           KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R+FLG   Y R+F+   
Sbjct: 600 KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFLIYSDASKKGL 300
           S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   L+ +DAS   +
Sbjct: 660 SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301 GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQI 360
           G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I
Sbjct: 720 GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

Query: 361 FTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDYEILYHPGKANVVADALSRKVSHSAAL 420
            TDH++L    T +    N R  RW   ++D+++EI Y PG AN +ADALSR       +
Sbjct: 780 LTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------I 839

Query: 421 ITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAG 480
           +    P+ +D E   I          + Q+++    + +++   +ND  L+    L    
Sbjct: 840 VDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNED 899

Query: 481 KAVEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYW 540
           K VE ++    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + 
Sbjct: 900 KRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFT 959

Query: 541 WRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPL 565
           W+ +++++ E+V  C  CQ  K+   KP G LQP+
Sbjct: 960 WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPI 977

[Close]

BLAST of Cmc02g0042841 vs. ExPASy TrEMBL
Match: A0A5A7U330 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00040 PE=4 SV=1)

HSP 1 Score: 1117.1 bits (2888), Expect = 0.0e+00
Identity = 557/568 (98.06%), Postives = 563/568 (99.12%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGLMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDG MRLCIDYRELNKVTVKNR
Sbjct: 580  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 639

Query: 61   YPLPRIHDLFDQLQGATVFSKIDLRSGYHQLRIKDDDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRI DLFDQLQGATVFSKIDLRSGYHQLRIKD+DVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 640  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 699

Query: 121  NAPAVFMDLMNRVFKEFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVF+EFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS
Sbjct: 700  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 759

Query: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRRFLGLAGYYRRFVENF 240
            KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVR FLGLAGYYRRFVENF
Sbjct: 760  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 819

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFLIYSDASKKGL 300
            SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSF+IYSDASKKGL
Sbjct: 820  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 879

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 880  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 939

Query: 361  KYFFTQKELNMRQRRWLELVKDYDYEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 420
            KYFFTQKELNMRQRRWLELVKDYD EILYHPGKANVVADALSRKVSHSAALITRQAPLHR
Sbjct: 940  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 999

Query: 421  DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGKAVEFSLSS 480
            DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAG+AVEFSLSS
Sbjct: 1000 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSS 1059

Query: 481  DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 540
            DGGLLFERRLCVPSDS VKTELLSEAHSSPFSMHPGSTKMY+D+KRVYWWRNMKREVAEF
Sbjct: 1060 DGGLLFERRLCVPSDSVVKTELLSEAHSSPFSMHPGSTKMYRDVKRVYWWRNMKREVAEF 1119

Query: 541  VSRCLVCQQVKAPRQKPAGLLQPLSIPE 569
            VSRCLVCQQVKAPRQKPAGLLQPLSIPE
Sbjct: 1120 VSRCLVCQQVKAPRQKPAGLLQPLSIPE 1147

[Close]

BLAST of Cmc02g0042841 vs. ExPASy TrEMBL
Match: A0A5D3BPI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G002120 PE=4 SV=1)

HSP 1 Score: 1114.8 bits (2882), Expect = 0.0e+00
Identity = 556/568 (97.89%), Postives = 561/568 (98.77%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGLMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDG MRLCIDYRELNKVTVKNR
Sbjct: 834  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 893

Query: 61   YPLPRIHDLFDQLQGATVFSKIDLRSGYHQLRIKDDDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRI DLFDQLQGATVFSKIDLRSGYHQLRIKD+DVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 894  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 953

Query: 121  NAPAVFMDLMNRVFKEFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVF+EFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS
Sbjct: 954  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 1013

Query: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRRFLGLAGYYRRFVENF 240
            KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVR FLGLAGYYRRFVENF
Sbjct: 1014 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 1073

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFLIYSDASKKGL 300
            SRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSF+IYSDASKKGL
Sbjct: 1074 SRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 1133

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 1134 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 1193

Query: 361  KYFFTQKELNMRQRRWLELVKDYDYEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 420
            KYFFTQKELNMRQRRWLELVKDYD EILYHPGKANVVADALSRKVSHSAALITRQAPLHR
Sbjct: 1194 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 1253

Query: 421  DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGKAVEFSLSS 480
            DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAG+  EFSLSS
Sbjct: 1254 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSS 1313

Query: 481  DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 540
            DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF
Sbjct: 1314 DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 1373

Query: 541  VSRCLVCQQVKAPRQKPAGLLQPLSIPE 569
            VS+CLVCQQVKAPRQKPAGLLQPLSIPE
Sbjct: 1374 VSKCLVCQQVKAPRQKPAGLLQPLSIPE 1401

[Close]

BLAST of Cmc02g0042841 vs. ExPASy TrEMBL
Match: A0A5A7T190 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold379G001700 PE=4 SV=1)

HSP 1 Score: 1114.4 bits (2881), Expect = 0.0e+00
Identity = 555/568 (97.71%), Postives = 561/568 (98.77%), Query Frame = 0


Query: 1    MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGLMRLCIDYRELNKVTVKNR 60
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDG MRLCIDYRELNKVTVKNR
Sbjct: 614  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 673

Query: 61   YPLPRIHDLFDQLQGATVFSKIDLRSGYHQLRIKDDDVPKTAFRSRYGHYEFIVMSFGLT 120
            YPLPRI DLFDQLQGATVFSKIDLRSGYHQLRIKD+DVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 674  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 733

Query: 121  NAPAVFMDLMNRVFKEFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
            NAPAVFMDLMNRVF+EFLDTFVIVFIDDILIYSKTE EHEEHLRMVLQTLRDNKLYAKF 
Sbjct: 734  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLQTLRDNKLYAKFL 793

Query: 181  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRRFLGLAGYYRRFVENF 240
            KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVR FLGLAGYYRRFVENF
Sbjct: 794  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 853

Query: 241  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFLIYSDASKKGL 300
            SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSF+IYSDASKKGL
Sbjct: 854  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 913

Query: 301  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360
            GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 914  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 973

Query: 361  KYFFTQKELNMRQRRWLELVKDYDYEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 420
            KYFFTQKELNMRQRRWLELVKDYD EILYHPGKANVVADALSRKVSHSAALITRQAPLHR
Sbjct: 974  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 1033

Query: 421  DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGKAVEFSLSS 480
            DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAE G+AVEFSLSS
Sbjct: 1034 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEVGQAVEFSLSS 1093

Query: 481  DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 540
            DGGLLFERRLCVPSDSA+KTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF
Sbjct: 1094 DGGLLFERRLCVPSDSAIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 1153

Query: 541  VSRCLVCQQVKAPRQKPAGLLQPLSIPE 569
            VS+CLVCQQVKAPRQKPAGLLQPLSIPE
Sbjct: 1154 VSKCLVCQQVKAPRQKPAGLLQPLSIPE 1181

[Close]

BLAST of Cmc02g0042841 vs. ExPASy TrEMBL
Match: A0A5A7UP94 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold126G00190 PE=4 SV=1)

HSP 1 Score: 1113.2 bits (2878), Expect = 0.0e+00
Identity = 555/568 (97.71%), Postives = 562/568 (98.94%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGLMRLCIDYRELNKVTVKNR 60
           MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDG MRLCIDYRELNKVTVKNR
Sbjct: 98  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 157

Query: 61  YPLPRIHDLFDQLQGATVFSKIDLRSGYHQLRIKDDDVPKTAFRSRYGHYEFIVMSFGLT 120
           YPLPRI DLFDQLQGATVFSKIDLRSG HQLRIKD+DVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 158 YPLPRIDDLFDQLQGATVFSKIDLRSGCHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 217

Query: 121 NAPAVFMDLMNRVFKEFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
           NAPAVFMDLMNRVF+EFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS
Sbjct: 218 NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 277

Query: 181 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRRFLGLAGYYRRFVENF 240
           KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVR FLGLAGYYRRFVENF
Sbjct: 278 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 337

Query: 241 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFLIYSDASKKGL 300
           SR ATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSF+IYSDASKKGL
Sbjct: 338 SRTATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 397

Query: 301 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360
           GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 398 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 457

Query: 361 KYFFTQKELNMRQRRWLELVKDYDYEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 420
           KYFFTQKELNMRQRRWLELVKDYD EILYHPGKANVVADALSRKVSHSAALITRQAPLHR
Sbjct: 458 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 517

Query: 421 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGKAVEFSLSS 480
           DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAG+AVEFSLSS
Sbjct: 518 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSS 577

Query: 481 DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 540
           DGGLLFERRLCVPSDSAVKTELL+EAHSSPFSMHPGSTKMYQDLKR+YWWRNMKREVAEF
Sbjct: 578 DGGLLFERRLCVPSDSAVKTELLAEAHSSPFSMHPGSTKMYQDLKRIYWWRNMKREVAEF 637

Query: 541 VSRCLVCQQVKAPRQKPAGLLQPLSIPE 569
           VS+CLVCQQVKAPRQKPAGLLQPLSIPE
Sbjct: 638 VSKCLVCQQVKAPRQKPAGLLQPLSIPE 665

[Close]

BLAST of Cmc02g0042841 vs. ExPASy TrEMBL
Match: A0A5A7TW75 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1202G00130 PE=4 SV=1)

HSP 1 Score: 1111.7 bits (2874), Expect = 0.0e+00
Identity = 554/568 (97.54%), Postives = 561/568 (98.77%), Query Frame = 0


Query: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGLMRLCIDYRELNKVTVKNR 60
           MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDG MRLCI+YRELNKVTVKNR
Sbjct: 122 MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIEYRELNKVTVKNR 181

Query: 61  YPLPRIHDLFDQLQGATVFSKIDLRSGYHQLRIKDDDVPKTAFRSRYGHYEFIVMSFGLT 120
           YPLPRI DLFDQLQGATVFS+IDLRSGYHQLRIKD+DVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 182 YPLPRIDDLFDQLQGATVFSRIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLT 241

Query: 121 NAPAVFMDLMNRVFKEFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFS 180
           NAPA FMDLMNRVF+EFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFS
Sbjct: 242 NAPAEFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFS 301

Query: 181 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRRFLGLAGYYRRFVENF 240
           KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVR FLGLAGYYRRFVENF
Sbjct: 302 KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 361

Query: 241 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFLIYSDASKKGL 300
           SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSF+IYSDASKKGL
Sbjct: 362 SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 421

Query: 301 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 360
           GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 422 GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 481

Query: 361 KYFFTQKELNMRQRRWLELVKDYDYEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 420
           KYFFTQKELNMRQRRWLELVKDYD EILYHPGKANVVADALSRKVSHSAALITRQAPLHR
Sbjct: 482 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHR 541

Query: 421 DLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGKAVEFSLSS 480
           DLER EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAG+AVEFSLSS
Sbjct: 542 DLERTEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSS 601

Query: 481 DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 540
           DGGLLFERRLCVPSDSAVKTELLSEAH SPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF
Sbjct: 602 DGGLLFERRLCVPSDSAVKTELLSEAHGSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 661

Query: 541 VSRCLVCQQVKAPRQKPAGLLQPLSIPE 569
           VSRCLVCQQVKAPRQKPAGLLQPLSIPE
Sbjct: 662 VSRCLVCQQVKAPRQKPAGLLQPLSIPE 689

[Close]

BLAST of Cmc02g0042841 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 121.3 bits (303), Expect = 2.5e-27
Identity = 58/125 (46.40%), Postives = 81/125 (64.80%), Query Frame = 0


Query: 162 HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPST 221
           HL MVLQ    ++ YA   KC F   Q+++LG  H++S  GVS DPAK+EA+ GW  P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 222 VSEVRRFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPV 281
            +E+R FLGL GYYRRFV+N+ +I  PLT+L +K +   W++    +F+ LK  + T PV
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS-LKWTEMAALAFKALKGAVTTLPV 122

Query: 282 LTVPD 285
           L +PD
Sbjct: 123 LALPD 126

The following BLAST results are available for this feature:

BLAST of Cmc02g0042841 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0048687.1	0.0e+00	98.06	pol protein [Cucumis melo var. makuwa]	[more]
TYK01613.1	0.0e+00	97.89	pol protein [Cucumis melo var. makuwa]	[more]
KAA0037244.1	0.0e+00	97.71	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0057672.1	0.0e+00	97.71	pol protein [Cucumis melo var. makuwa]	[more]
KAA0045479.1	0.0e+00	97.54	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc02g0042841 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CT41	1.9e-93	33.22	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	1.9e-93	33.22	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	1.9e-93	33.22	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	1.9e-93	33.22	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT37	1.9e-93	33.22	Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc02g0042841 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U330	0.0e+00	98.06	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43...	[more]
A0A5D3BPI1	0.0e+00	97.89	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45...	[more]
A0A5A7T190	0.0e+00	97.71	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37...	[more]
A0A5A7UP94	0.0e+00	97.71	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold126G00190 PE...	[more]
A0A5A7TW75	0.0e+00	97.54	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1202G00130 P...	[more]

BLAST of Cmc02g0042841 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	2.5e-27	46.40	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 206..288 e-value: 1.6E-30 score: 107.0
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 61..196 e-value: 2.9E-86 score: 290.2
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 287..383 e-value: 3.8E-34 score: 117.1
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 36..195 e-value: 1.1E-27 score: 97.0
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 17..196 score: 10.925517
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 1..121 e-value: 2.9E-86 score: 290.2
None	No IPR available	GENE3D	1.10.340.70		coord: 461..551 e-value: 2.7E-18 score: 68.0
None	No IPR available	GENE3D	3.10.20.370		coord: 289..354 e-value: 1.2E-8 score: 36.8
None	No IPR available	PANTHER	PTHR34072	ENZYMATIC POLYPROTEIN-RELATED	coord: 13..564
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 291..405 e-value: 4.12512E-60 score: 193.093
None	No IPR available	CDD	cd01647	RT_LTR	coord: 20..196 e-value: 2.11967E-95 score: 286.799
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 496..552 e-value: 2.4E-17 score: 62.7
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..389

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc02g0042841.1	Cmc02g0042841.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
cellular_component	GO:0016020	membrane
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding