Cmc02g0042821 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc02g0042821
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Gag-pol polyprotein
Location	CMiso1.1chr02: 4691845 .. 4692390 (-)
RNA-Seq Expression	Cmc02g0042821
Synteny	Cmc02g0042821

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAACAATCAATGTAGTTATAAATGATCTCGATTCTGATATCAAACAGATGAATGATGTGGAAGATGATACTCCAAACATGTATGAAGTCAGAACTACGAGTACTGTGGAAGAGTCTAAAGCTGATAATTCATCCGACGGTCCAGGCAAAAGTTTGAAAAAATCATCAGAAGAAATTATCAATAAAAAATATGAACTAATTCTGTCAGCTCATGTAAAGAAAAATCATCCAGCAAGCTCTATCATAGGTGATCCATCAGTTGGGATGCAGACCAGAAGGAAAGAGAAGATTGACAATTTGAAGATGGTTGCTGACTTGTGCTATATTTCCACCATTGAACCTTCGACTATTGGCTCTGCTCTCAAGGATGAGTATTGGTTAAATTCTATGCAAGAGGAGCTACTGCAATTTAGACAAAAGAATGTCTGGACGTTAGTCTCAAAGCCAGAAGGTGTAAATGTTATTGGTACGAAATGGATATTTAAAAATAAGACTGATGAAACTGGGTGTGTGACGAAAAATAAAGCAAAATTAGTAGCTTAA

mRNA sequence

ATGGAAACAATCAATGTAGTTATAAATGATCTCGATTCTGATATCAAACAGATGAATGATGTGGAAGATGATACTCCAAACATGTATGAAGTCAGAACTACGAGTACTGTGGAAGAGTCTAAAGCTGATAATTCATCCGACGGTCCAGGCAAAAGTTTGAAAAAATCATCAGAAGAAATTATCAATAAAAAATATGAACTAATTCTGTCAGCTCATGTAAAGAAAAATCATCCAGCAAGCTCTATCATAGGTGATCCATCAGTTGGGATGCAGACCAGAAGGAAAGAGAAGATTGACAATTTGAAGATGGTTGCTGACTTGTGCTATATTTCCACCATTGAACCTTCGACTATTGGCTCTGCTCTCAAGGATGAGTATTGGTTAAATTCTATGCAAGAGGAGCTACTGCAATTTAGACAAAAGAATGTCTGGACGTTAGTCTCAAAGCCAGAAGGTGTAAATGTTATTGGTACGAAATGGATATTTAAAAATAAGACTGATGAAACTGGGTGTGTGACGAAAAATAAAGCAAAATTAGTAGCTTAA

Coding sequence (CDS)

ATGGAAACAATCAATGTAGTTATAAATGATCTCGATTCTGATATCAAACAGATGAATGATGTGGAAGATGATACTCCAAACATGTATGAAGTCAGAACTACGAGTACTGTGGAAGAGTCTAAAGCTGATAATTCATCCGACGGTCCAGGCAAAAGTTTGAAAAAATCATCAGAAGAAATTATCAATAAAAAATATGAACTAATTCTGTCAGCTCATGTAAAGAAAAATCATCCAGCAAGCTCTATCATAGGTGATCCATCAGTTGGGATGCAGACCAGAAGGAAAGAGAAGATTGACAATTTGAAGATGGTTGCTGACTTGTGCTATATTTCCACCATTGAACCTTCGACTATTGGCTCTGCTCTCAAGGATGAGTATTGGTTAAATTCTATGCAAGAGGAGCTACTGCAATTTAGACAAAAGAATGTCTGGACGTTAGTCTCAAAGCCAGAAGGTGTAAATGTTATTGGTACGAAATGGATATTTAAAAATAAGACTGATGAAACTGGGTGTGTGACGAAAAATAAAGCAAAATTAGTAGCTTAA

Protein sequence

METINVVINDLDSDIKQMNDVEDDTPNMYEVRTTSTVEESKADNSSDGPGKSLKKSSEEIINKKYELILSAHVKKNHPASSIIGDPSVGMQTRRKEKIDNLKMVADLCYISTIEPSTIGSALKDEYWLNSMQEELLQFRQKNVWTLVSKPEGVNVIGTKWIFKNKTDETGCVTKNKAKLVA

Homology

[Close]

BLAST of Cmc02g0042821 vs. NCBI nr
Match: KAA0035157.1 (gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 299.3 bits (765), Expect = 2.3e-77
Identity = 158/182 (86.81%), Postives = 165/182 (90.66%), Query Frame = 0


Query: 1   METINVVINDLDSDIKQMNDVEDDTPNMYEVRTTSTVEESKADNSSDGPGKSLKKSSEEI 60
           METINVVINDLDSDIKQMND ED+TPNM EVRTTSTVEESKADNSSD  GKSLKKS EEI
Sbjct: 486 METINVVINDLDSDIKQMNDEEDETPNMSEVRTTSTVEESKADNSSDSLGKSLKKSLEEI 545

Query: 61  INKKYELILSAHVKKNHPASSIIGDPSVGMQTRRKEKIDNLKMVADLCYISTIEPSTIG- 120
           INKK +LI SAHVKKNHPASSIIGDPS GMQTRRK+KID LKMVADLCYISTIE ST+  
Sbjct: 546 INKKSKLIPSAHVKKNHPASSIIGDPSAGMQTRRKDKIDYLKMVADLCYISTIEHSTVDH 605

Query: 121 SALKDEYWLNSMQEELLQFRQKNVWTLVSKPEGVNVIGTKWIFKNKTDETGCVTKNKAKL 180
           SALKDEYWLN+MQEELLQFR+ NVW LV KP GVNVIGTKWIFKNKTDE GCVTKNKA+L
Sbjct: 606 SALKDEYWLNAMQEELLQFRRNNVWMLVLKPVGVNVIGTKWIFKNKTDEIGCVTKNKARL 665

Query: 181 VA 182
           VA
Sbjct: 666 VA 667

[Close]

BLAST of Cmc02g0042821 vs. NCBI nr
Match: TYK13607.1 (gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 298.5 bits (763), Expect = 3.9e-77
Identity = 155/181 (85.64%), Postives = 161/181 (88.95%), Query Frame = 0


Query: 1   METINVVINDLDSDIKQMNDVEDDTPNMYEVRTTSTVEESKADNSSDGPGKSLKKSSEEI 60
           METINVVINDLDS IKQMND ED+TPNM E RTTSTVE SKADN SD PGKSLKKSSEEI
Sbjct: 1   METINVVINDLDSAIKQMNDKEDETPNMSEARTTSTVEVSKADNPSDDPGKSLKKSSEEI 60

Query: 61  INKKYELILSAHVKKNHPASSIIGDPSVGMQTRRKEKIDNLKMVADLCYISTIEPSTIGS 120
           I KK ELI SAHVKKNHPASSIIGDPS GMQTRRKEKID +KMV DLCY STIEPST+ S
Sbjct: 61  ITKKSELIPSAHVKKNHPASSIIGDPSAGMQTRRKEKIDYMKMVVDLCYTSTIEPSTVDS 120

Query: 121 ALKDEYWLNSMQEELLQFRQKNVWTLVSKPEGVNVIGTKWIFKNKTDETGCVTKNKAKLV 180
           ALKDEYWLN+MQEELLQFRQ NVWTLVSKPE VNVIGTK +FKNKT E GCVTKNKA+LV
Sbjct: 121 ALKDEYWLNAMQEELLQFRQNNVWTLVSKPEDVNVIGTKLVFKNKTGEVGCVTKNKARLV 180

Query: 181 A 182
           A
Sbjct: 181 A 181

[Close]

BLAST of Cmc02g0042821 vs. NCBI nr
Match: KAA0042298.1 (gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 292.7 bits (748), Expect = 2.1e-75
Identity = 151/157 (96.18%), Postives = 152/157 (96.82%), Query Frame = 0


Query: 1   METINVVINDLDSDIKQMNDVEDDTPNMYEVRTTSTVEESKADNSSDGPGKSLKKSSEEI 60
           METINVVINDLDSDI QMND EDDTPNMYEVRTTSTVEESKADNSSDGPGKSLKKSSEEI
Sbjct: 340 METINVVINDLDSDINQMNDEEDDTPNMYEVRTTSTVEESKADNSSDGPGKSLKKSSEEI 399

Query: 61  INKKYELILSAHVKKNHPASSIIGDPSVGMQTRRKEKIDNLKMVADLCYISTIEPSTIGS 120
           INKKYELILSAHVKKNHPASSIIGD SVGMQTRRK+KID LKMVADLCYISTIEPSTIGS
Sbjct: 400 INKKYELILSAHVKKNHPASSIIGDSSVGMQTRRKDKIDYLKMVADLCYISTIEPSTIGS 459

Query: 121 ALKDEYWLNSMQEELLQFRQKNVWTLVSKPEGVNVIG 158
           ALKDEYWLNSMQEELLQFRQ NVWTLVSKPEGVNVIG
Sbjct: 460 ALKDEYWLNSMQEELLQFRQNNVWTLVSKPEGVNVIG 496

[Close]

BLAST of Cmc02g0042821 vs. NCBI nr
Match: TYK29237.1 (gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 289.3 bits (739), Expect = 2.3e-74
Identity = 154/182 (84.62%), Postives = 163/182 (89.56%), Query Frame = 0


Query: 1   METINVVINDLDSDIKQMNDVEDDTPNMYEVRTTSTVEESKADNSSDGPGKSLKKSSEEI 60
           METINVVINDL+SDIKQMND ED+TPNM EVRTTSTVEESKADNSSD P KSLKKSSEEI
Sbjct: 472 METINVVINDLNSDIKQMNDEEDETPNMSEVRTTSTVEESKADNSSDSPEKSLKKSSEEI 531

Query: 61  INKKYELILSAHVKKNHPASSIIGDPSVGMQTRRKEKIDNLKMVADLCYISTIEPSTIG- 120
           INKK +LI SAHVKKNHPASSIIGDPS GMQTRRK+KID LKMVADLCYIS+IE ST+  
Sbjct: 532 INKKSKLISSAHVKKNHPASSIIGDPSAGMQTRRKDKIDYLKMVADLCYISSIEHSTVDH 591

Query: 121 SALKDEYWLNSMQEELLQFRQKNVWTLVSKPEGVNVIGTKWIFKNKTDETGCVTKNKAKL 180
           SA KDEYWLN+MQEELL+ R  NVW LV KP GVNVIGTKWIFKNKTDE GCVTKNKA+L
Sbjct: 592 SAFKDEYWLNAMQEELLKLR-NNVWMLVLKPVGVNVIGTKWIFKNKTDEIGCVTKNKARL 651

Query: 181 VA 182
           VA
Sbjct: 652 VA 652

[Close]

BLAST of Cmc02g0042821 vs. NCBI nr
Match: KAA0065371.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK20868.1 putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 289.3 bits (739), Expect = 2.3e-74
Identity = 152/181 (83.98%), Postives = 160/181 (88.40%), Query Frame = 0


Query: 1   METINVVINDLDSDIKQMNDVEDDTPNMYEVRTTSTVEESKADNSSDGPGKSLKKSSEEI 60
           METINVVINDLDS IKQMND ED+TPNM E RTTSTVE SKADN SD PGKSL+KSSEEI
Sbjct: 105 METINVVINDLDSAIKQMND-EDETPNMSEARTTSTVEVSKADNPSDDPGKSLEKSSEEI 164

Query: 61  INKKYELILSAHVKKNHPASSIIGDPSVGMQTRRKEKIDNLKMVADLCYISTIEPSTIGS 120
           I KK ELI SAHVKKNHPASSIIGDPS GM TR+KEKID +KMVADLCY STIEP TI S
Sbjct: 165 ITKKSELIPSAHVKKNHPASSIIGDPSAGMHTRKKEKIDYMKMVADLCYTSTIEPFTIDS 224

Query: 121 ALKDEYWLNSMQEELLQFRQKNVWTLVSKPEGVNVIGTKWIFKNKTDETGCVTKNKAKLV 180
            LKDEY LN+MQEELLQFR+ NVW LVSKPEGVNVIGTKW+FKNKTDE GCVTKNKA+LV
Sbjct: 225 TLKDEYRLNAMQEELLQFRRNNVWMLVSKPEGVNVIGTKWVFKNKTDEAGCVTKNKARLV 284

Query: 181 A 182
           A
Sbjct: 285 A 284

[Close]

BLAST of Cmc02g0042821 vs. ExPASy Swiss-Prot
Match: P92520 (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 GN=AtMg00820 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.1e-10
Identity = 38/94 (40.43%), Postives = 50/94 (53.19%), Query Frame = 0


Query: 90  MQTRRKEKIDNLKMVADLCYISTI--EPSTIGSALKDEYWLNSMQEELLQFRQKNVWTLV 149
           M TR K  I+ L     L   +TI  EP ++  ALKD  W  +MQEEL    +   W LV
Sbjct: 1   MLTRSKAGINKLNPKYSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILV 60

Query: 150 SKPEGVNVIGTKWIFKNKTDETGCVTKNKAKLVA 182
             P   N++G KW+FK K    G + + KA+LVA
Sbjct: 61  PPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVA 94

[Close]

BLAST of Cmc02g0042821 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 46.6 bits (109), Expect = 3.5e-04
Identity = 19/55 (34.55%), Postives = 32/55 (58.18%), Query Frame = 0


Query: 127 WLNSMQEELLQFRQKNVWTLVSKPEGVNVIGTKWIFKNKTDETGCVTKNKAKLVA 182
           W  ++  EL   +  N WT+  +PE  N++ ++W+F  K +E G   + KA+LVA
Sbjct: 906 WEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVA 960

[Close]

BLAST of Cmc02g0042821 vs. ExPASy TrEMBL
Match: A0A5A7T0Q0 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G002510 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 1.1e-77
Identity = 158/182 (86.81%), Postives = 165/182 (90.66%), Query Frame = 0


Query: 1   METINVVINDLDSDIKQMNDVEDDTPNMYEVRTTSTVEESKADNSSDGPGKSLKKSSEEI 60
           METINVVINDLDSDIKQMND ED+TPNM EVRTTSTVEESKADNSSD  GKSLKKS EEI
Sbjct: 486 METINVVINDLDSDIKQMNDEEDETPNMSEVRTTSTVEESKADNSSDSLGKSLKKSLEEI 545

Query: 61  INKKYELILSAHVKKNHPASSIIGDPSVGMQTRRKEKIDNLKMVADLCYISTIEPSTIG- 120
           INKK +LI SAHVKKNHPASSIIGDPS GMQTRRK+KID LKMVADLCYISTIE ST+  
Sbjct: 546 INKKSKLIPSAHVKKNHPASSIIGDPSAGMQTRRKDKIDYLKMVADLCYISTIEHSTVDH 605

Query: 121 SALKDEYWLNSMQEELLQFRQKNVWTLVSKPEGVNVIGTKWIFKNKTDETGCVTKNKAKL 180
           SALKDEYWLN+MQEELLQFR+ NVW LV KP GVNVIGTKWIFKNKTDE GCVTKNKA+L
Sbjct: 606 SALKDEYWLNAMQEELLQFRRNNVWMLVLKPVGVNVIGTKWIFKNKTDEIGCVTKNKARL 665

Query: 181 VA 182
           VA
Sbjct: 666 VA 667

[Close]

BLAST of Cmc02g0042821 vs. ExPASy TrEMBL
Match: A0A5D3CNZ6 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G001080 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 1.9e-77
Identity = 155/181 (85.64%), Postives = 161/181 (88.95%), Query Frame = 0


Query: 1   METINVVINDLDSDIKQMNDVEDDTPNMYEVRTTSTVEESKADNSSDGPGKSLKKSSEEI 60
           METINVVINDLDS IKQMND ED+TPNM E RTTSTVE SKADN SD PGKSLKKSSEEI
Sbjct: 1   METINVVINDLDSAIKQMNDKEDETPNMSEARTTSTVEVSKADNPSDDPGKSLKKSSEEI 60

Query: 61  INKKYELILSAHVKKNHPASSIIGDPSVGMQTRRKEKIDNLKMVADLCYISTIEPSTIGS 120
           I KK ELI SAHVKKNHPASSIIGDPS GMQTRRKEKID +KMV DLCY STIEPST+ S
Sbjct: 61  ITKKSELIPSAHVKKNHPASSIIGDPSAGMQTRRKEKIDYMKMVVDLCYTSTIEPSTVDS 120

Query: 121 ALKDEYWLNSMQEELLQFRQKNVWTLVSKPEGVNVIGTKWIFKNKTDETGCVTKNKAKLV 180
           ALKDEYWLN+MQEELLQFRQ NVWTLVSKPE VNVIGTK +FKNKT E GCVTKNKA+LV
Sbjct: 121 ALKDEYWLNAMQEELLQFRQNNVWTLVSKPEDVNVIGTKLVFKNKTGEVGCVTKNKARLV 180

Query: 181 A 182
           A
Sbjct: 181 A 181

[Close]

BLAST of Cmc02g0042821 vs. ExPASy TrEMBL
Match: A0A5A7THK0 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold824G00940 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 1.0e-75
Identity = 151/157 (96.18%), Postives = 152/157 (96.82%), Query Frame = 0


Query: 1   METINVVINDLDSDIKQMNDVEDDTPNMYEVRTTSTVEESKADNSSDGPGKSLKKSSEEI 60
           METINVVINDLDSDI QMND EDDTPNMYEVRTTSTVEESKADNSSDGPGKSLKKSSEEI
Sbjct: 340 METINVVINDLDSDINQMNDEEDDTPNMYEVRTTSTVEESKADNSSDGPGKSLKKSSEEI 399

Query: 61  INKKYELILSAHVKKNHPASSIIGDPSVGMQTRRKEKIDNLKMVADLCYISTIEPSTIGS 120
           INKKYELILSAHVKKNHPASSIIGD SVGMQTRRK+KID LKMVADLCYISTIEPSTIGS
Sbjct: 400 INKKYELILSAHVKKNHPASSIIGDSSVGMQTRRKDKIDYLKMVADLCYISTIEPSTIGS 459

Query: 121 ALKDEYWLNSMQEELLQFRQKNVWTLVSKPEGVNVIG 158
           ALKDEYWLNSMQEELLQFRQ NVWTLVSKPEGVNVIG
Sbjct: 460 ALKDEYWLNSMQEELLQFRQNNVWTLVSKPEGVNVIG 496

[Close]

BLAST of Cmc02g0042821 vs. ExPASy TrEMBL
Match: A0A5A7VI01 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold682G00330 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 1.1e-74
Identity = 152/181 (83.98%), Postives = 160/181 (88.40%), Query Frame = 0


Query: 1   METINVVINDLDSDIKQMNDVEDDTPNMYEVRTTSTVEESKADNSSDGPGKSLKKSSEEI 60
           METINVVINDLDS IKQMND ED+TPNM E RTTSTVE SKADN SD PGKSL+KSSEEI
Sbjct: 105 METINVVINDLDSAIKQMND-EDETPNMSEARTTSTVEVSKADNPSDDPGKSLEKSSEEI 164

Query: 61  INKKYELILSAHVKKNHPASSIIGDPSVGMQTRRKEKIDNLKMVADLCYISTIEPSTIGS 120
           I KK ELI SAHVKKNHPASSIIGDPS GM TR+KEKID +KMVADLCY STIEP TI S
Sbjct: 165 ITKKSELIPSAHVKKNHPASSIIGDPSAGMHTRKKEKIDYMKMVADLCYTSTIEPFTIDS 224

Query: 121 ALKDEYWLNSMQEELLQFRQKNVWTLVSKPEGVNVIGTKWIFKNKTDETGCVTKNKAKLV 180
            LKDEY LN+MQEELLQFR+ NVW LVSKPEGVNVIGTKW+FKNKTDE GCVTKNKA+LV
Sbjct: 225 TLKDEYRLNAMQEELLQFRRNNVWMLVSKPEGVNVIGTKWVFKNKTDEAGCVTKNKARLV 284

Query: 181 A 182
           A
Sbjct: 285 A 284

[Close]

BLAST of Cmc02g0042821 vs. ExPASy TrEMBL
Match: A0A5D3DZD2 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1228G00280 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 1.1e-74
Identity = 154/182 (84.62%), Postives = 163/182 (89.56%), Query Frame = 0


Query: 1   METINVVINDLDSDIKQMNDVEDDTPNMYEVRTTSTVEESKADNSSDGPGKSLKKSSEEI 60
           METINVVINDL+SDIKQMND ED+TPNM EVRTTSTVEESKADNSSD P KSLKKSSEEI
Sbjct: 472 METINVVINDLNSDIKQMNDEEDETPNMSEVRTTSTVEESKADNSSDSPEKSLKKSSEEI 531

Query: 61  INKKYELILSAHVKKNHPASSIIGDPSVGMQTRRKEKIDNLKMVADLCYISTIEPSTIG- 120
           INKK +LI SAHVKKNHPASSIIGDPS GMQTRRK+KID LKMVADLCYIS+IE ST+  
Sbjct: 532 INKKSKLISSAHVKKNHPASSIIGDPSAGMQTRRKDKIDYLKMVADLCYISSIEHSTVDH 591

Query: 121 SALKDEYWLNSMQEELLQFRQKNVWTLVSKPEGVNVIGTKWIFKNKTDETGCVTKNKAKL 180
           SA KDEYWLN+MQEELL+ R  NVW LV KP GVNVIGTKWIFKNKTDE GCVTKNKA+L
Sbjct: 592 SAFKDEYWLNAMQEELLKLR-NNVWMLVLKPVGVNVIGTKWIFKNKTDEIGCVTKNKARL 651

Query: 181 VA 182
           VA
Sbjct: 652 VA 652

[Close]

BLAST of Cmc02g0042821 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 68.2 bits (165), Expect = 7.9e-12
Identity = 38/94 (40.43%), Postives = 50/94 (53.19%), Query Frame = 0


Query: 90  MQTRRKEKIDNLKMVADLCYISTI--EPSTIGSALKDEYWLNSMQEELLQFRQKNVWTLV 149
           M TR K  I+ L     L   +TI  EP ++  ALKD  W  +MQEEL    +   W LV
Sbjct: 1   MLTRSKAGINKLNPKYSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILV 60

Query: 150 SKPEGVNVIGTKWIFKNKTDETGCVTKNKAKLVA 182
             P   N++G KW+FK K    G + + KA+LVA
Sbjct: 61  PPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVA 94

The following BLAST results are available for this feature:

BLAST of Cmc02g0042821 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0035157.1	2.3e-77	86.81	gag-pol polyprotein [Cucumis melo var. makuwa]	[more]
TYK13607.1	3.9e-77	85.64	gag-pol polyprotein [Cucumis melo var. makuwa]	[more]
KAA0042298.1	2.1e-75	96.18	gag-pol polyprotein [Cucumis melo var. makuwa]	[more]
TYK29237.1	2.3e-74	84.62	gag-pol polyprotein [Cucumis melo var. makuwa]	[more]
KAA0065371.1	2.3e-74	83.98	putative mitochondrial protein [Cucumis melo var. makuwa] >TYK20868.1 putative m...	[more]

BLAST of Cmc02g0042821 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P92520	1.1e-10	40.43	Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 ...	[more]
P04146	3.5e-04	34.55	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]

BLAST of Cmc02g0042821 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T0Q0	1.1e-77	86.81	Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G0...	[more]
A0A5D3CNZ6	1.9e-77	85.64	Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G...	[more]
A0A5A7THK0	1.0e-75	96.18	Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold824G...	[more]
A0A5A7VI01	1.1e-74	83.98	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5D3DZD2	1.1e-74	84.62	Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1228...	[more]

BLAST of Cmc02g0042821 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00820.1	7.9e-12	40.43	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..55
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..51

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc02g0042821.1	Cmc02g0042821.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding