Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTTCTTGAGCATGTGTTAATTCGATACCTTGAAGAAGAATGAACTTTCCTTTTTATAAGATAGAAAAAGAAGAACTTTGAAACCAGAGAATGAAATCCTTAAAGATTTTTGGTTAAAAATAATCTTTAAAGATCCTTGGTTAAAGTATGAAGCAAAACAAATATCTTCTCCAAAAATGGCATTCTTGAAGACTGTCCCACGATCATGCAAAATAGAAAGAAAAGAGTTCGTGCTCTCTCTAGATAAATATTCAAGATCTATACATTACTGGCTAACTGAAATAGGAGCACACAAGTCATTCTCAATAGAAGTTTCCCTTTCTGCTCTTGATTGGATCAGAAGCACCATGAAAACTTTGATCGCAACTCCAAGCTCCAATCATTTTTTATGGAAACAAGAATTCAGAACATTGTTTGTGGATTAGAAAGATAAATAATGTGAATGGTTTGTACGGTAAAAATTTTCAGAGTTGATCATAAAAGTCGAAAATCTTGCATCTTTGTGCTCGAAGGTACTAATAGAACTGGTTGGGTCTCCTTTCTCTCCATGATTACACCATAAGTACTTGAGGTTGAAGCAAAAACCATACCACATTTTATGCCCCACAATAGCCCAGACCCTCATTACTCACCTCCAAGCATTGATTACCACAAACGTTCATATGCAAAGGCAGTTTATGAGGGAAGCTCAAGCGATTCTAGTTATTCTTCAAGTACCAACTCACCTGTTCACAAATCCCCTTTGTCTTTAGACAATGAAGTTGTTCTGGTAAGACGTTTCTTTCATGACAATTGACAAAAAATTATCTGTAATCTGAAGAAACAAACTGAAAAAGAGTTTACATACATTCCATTTCATTCTGAAAAAGCATTGATTAACTTCAAAGAACCAATCCCCGCCAATTTACTTTGTCAAAATAGAGGTTGGTCAATGGTAGGCAAATACTTTGTTAAATTTGAAAAGTGGTCCTACTCCCTTCATGCCTCTCCAAAACTCATCCCAAGCTATGGTGGATGGACCACATTCAAAGAAATCTCACTCTATATGTGGAATATGACTACTTTTCAACAAATTGGAAAGCTTTGCTGGGGATTCATTAAAATTGTTGATGAAACCAAGGAAGGTAGTAATCTTATAGAAGCAAAGATCAAAGTCAGGTATCACTACTCTGGTTTCTTACTTGCTAACATCAAGATCTTTGATGAGGAAGGCAATAAATTTATTATACAAATCGTGACTCATTTTGATAGAAAATGGCTTACTGAAAGAGATGTACATCTTCATGGAACCTTCAAAAGACAAGCAGCAACCACCTTTGATGAATTCAAACCAGACTCAGAGCAGTTTTTCTTTGATGGCAATGAAGCCATCTCATCAGAATTCTTGAACTCCGGCAGCCAAAGAGACAGTAAATTGAAAATTAAGATAGTAGCATTAAAGTTCATTATTATCATTAATGATAAGGAAGCCACGTCCTCCAAAGAAGATAAGTTAAAATCCAAGACATTGAATGAAGACGGTATGGATGCTGATGAATTGAGGCCTTTAAAGATCCATATGATGGAGCATTGGATAAAGGAAAACGAAAAGTTGAGCATATCTGTTGAAAATGATACTTCATTTATTAAGCCAAATTCAAAAAGGAAAATATCCTTTAACTCACTAAAGAATAAAACCAACTACTACAATTCCAAAAATGTCCCATCCATTCGGTCTCCCAATAGAAAACAAAAAGTCAACGGAGAGAGAAGTAGTAGGAGAGAAACCTCTTTAATGCAATACATAGTCAAATCCAATTAG
mRNA sequence
TTTTTCTTGAGCATGTGTTAATTCGATACCTTGAAGAAGAATGAACTTTCCTTTTTATAAGATAGAAAAAGAAGAACTTTGAAACCAGAGAATGAAATCCTTAAAGATTTTTGGTTAAAAATAATCTTTAAAGATCCTTGGTTAAAGTATGAAGCAAAACAAATATCTTCTCCAAAAATGGCATTCTTGAAGACTGTCCCACGATCATGCAAAATAGAAAGAAAAGAGTTCGTGCTCTCTCTAGATAAATATTCAAGATCTATACATTACTGGCTAACTGAAATAGGAGCACACAAGTCATTCTCAATAGAAGTTTCCCTTTCTGCTCTTGATTGGATCAGAAGCACCATGAAAACTTTGATCGCAACTCCAAGCTCCAATCATTTTTTATGGAAACAAGAATTCAGAACATTGTTTGTGGATTAGAAAGATAAATAATGTGAATGGTTTGTACGGTAAAAATTTTCAGAGTTGATCATAAAAGTCGAAAATCTTGCATCTTTGTGCTCGAAGGTACTAATAGAACTGGTTGGGTCTCCTTTCTCTCCATGATTACACCATAAGTACTTGAGGTTGAAGCAAAAACCATACCACATTTTATGCCCCACAATAGCCCAGACCCTCATTACTCACCTCCAAGCATTGATTACCACAAACGTTCATATGCAAAGGCAGTTTATGAGGGAAGCTCAAGCGATTCTAGTTATTCTTCAAGTACCAACTCACCTGTTCACAAATCCCCTTTGTCTTTAGACAATGAAGTTGTTCTGGTAAGACGTTTCTTTCATGACAATTGACAAAAAATTATCTGTAATCTGAAGAAACAAACTGAAAAAGAGTTTACATACATTCCATTTCATTCTGAAAAAGCATTGATTAACTTCAAAGAACCAATCCCCGCCAATTTACTTTGTCAAAATAGAGGTTGGTCAATGGTAGGCAAATACTTTGTTAAATTTGAAAAGTGGTCCTACTCCCTTCATGCCTCTCCAAAACTCATCCCAAGCTATGGTGGATGGACCACATTCAAAGAAATCTCACTCTATATGTGGAATATGACTACTTTTCAACAAATTGGAAAGCTTTGCTGGGGATTCATTAAAATTGTTGATGAAACCAAGGAAGGTAGTAATCTTATAGAAGCAAAGATCAAAGTCAGGTATCACTACTCTGGTTTCTTACTTGCTAACATCAAGATCTTTGATGAGGAAGGCAATAAATTTATTATACAAATCGTGACTCATTTTGATAGAAAATGGCTTACTGAAAGAGATGTACATCTTCATGGAACCTTCAAAAGACAAGCAGCAACCACCTTTGATGAATTCAAACCAGACTCAGAGCAGTTTTTCTTTGATGGCAATGAAGCCATCTCATCAGAATTCTTGAACTCCGGCAGCCAAAGAGACAGTAAATTGAAAATTAAGATAGTAGCATTAAAGTTCATTATTATCATTAATGATAAGGAAGCCACGTCCTCCAAAGAAGATAAGTTAAAATCCAAGACATTGAATGAAGACGGTATGGATGCTGATGAATTGAGGCCTTTAAAGATCCATATGATGGAGCATTGGATAAAGGAAAACGAAAAGTTGAGCATATCTGTTGAAAATGATACTTCATTTATTAAGCCAAATTCAAAAAGGAAAATATCCTTTAACTCACTAAAGAATAAAACCAACTACTACAATTCCAAAAATGTCCCATCCATTCGGTCTCCCAATAGAAAACAAAAAGTCAACGGAGAGAGAAGTAGTAGGAGAGAAACCTCTTTAATGCAATACATAGTCAAATCCAATTAG
Coding sequence (CDS)
ATGGTAGGCAAATACTTTGTTAAATTTGAAAAGTGGTCCTACTCCCTTCATGCCTCTCCAAAACTCATCCCAAGCTATGGTGGATGGACCACATTCAAAGAAATCTCACTCTATATGTGGAATATGACTACTTTTCAACAAATTGGAAAGCTTTGCTGGGGATTCATTAAAATTGTTGATGAAACCAAGGAAGGTAGTAATCTTATAGAAGCAAAGATCAAAGTCAGGTATCACTACTCTGGTTTCTTACTTGCTAACATCAAGATCTTTGATGAGGAAGGCAATAAATTTATTATACAAATCGTGACTCATTTTGATAGAAAATGGCTTACTGAAAGAGATGTACATCTTCATGGAACCTTCAAAAGACAAGCAGCAACCACCTTTGATGAATTCAAACCAGACTCAGAGCAGTTTTTCTTTGATGGCAATGAAGCCATCTCATCAGAATTCTTGAACTCCGGCAGCCAAAGAGACAGTAAATTGAAAATTAAGATAGTAGCATTAAAGTTCATTATTATCATTAATGATAAGGAAGCCACGTCCTCCAAAGAAGATAAGTTAAAATCCAAGACATTGAATGAAGACGGTATGGATGCTGATGAATTGAGGCCTTTAAAGATCCATATGATGGAGCATTGGATAAAGGAAAACGAAAAGTTGAGCATATCTGTTGAAAATGATACTTCATTTATTAAGCCAAATTCAAAAAGGAAAATATCCTTTAACTCACTAAAGAATAAAACCAACTACTACAATTCCAAAAATGTCCCATCCATTCGGTCTCCCAATAGAAAACAAAAAGTCAACGGAGAGAGAAGTAGTAGGAGAGAAACCTCTTTAATGCAATACATAGTCAAATCCAATTAG
Protein sequence
MVGKYFVKFEKWSYSLHASPKLIPSYGGWTTFKEISLYMWNMTTFQQIGKLCWGFIKIVDETKEGSNLIEAKIKVRYHYSGFLLANIKIFDEEGNKFIIQIVTHFDRKWLTERDVHLHGTFKRQAATTFDEFKPDSEQFFFDGNEAISSEFLNSGSQRDSKLKIKIVALKFIIIINDKEATSSKEDKLKSKTLNEDGMDADELRPLKIHMMEHWIKENEKLSISVENDTSFIKPNSKRKISFNSLKNKTNYYNSKNVPSIRSPNRKQKVNGERSSRRETSLMQYIVKSN
Homology
BLAST of Cmc02g0042261 vs. NCBI nr
Match:
KAA0038838.1 (hypothetical protein E6C27_scaffold2487G00040 [Cucumis melo var. makuwa] >TYK14264.1 hypothetical protein E5676_scaffold1121G00580 [Cucumis melo var. makuwa])
HSP 1 Score: 418.3 bits (1074), Expect = 5.3e-113
Identity = 205/209 (98.09%), Postives = 207/209 (99.04%), Query Frame = 0
Query: 1 MVGKYFVKFEKWSYSLHASPKLIPSYGGWTTFKEISLYMWNMTTFQQIGKLCWGFIKIVD 60
MVGKYFVKFEKWSYSLHASPKLIPSYGGWTTF+EISLYMWNMTTFQQI KLCWGFIKIVD
Sbjct: 112 MVGKYFVKFEKWSYSLHASPKLIPSYGGWTTFREISLYMWNMTTFQQIEKLCWGFIKIVD 171
Query: 61 ETKEGSNLIEAKIKVRYHYSGFLLANIKIFDEEGNKFIIQIVTHFDRKWLTERDVHLHGT 120
ETKE SNLIEAKIKV+YHYSGFLLANIKIFDEEGNKFIIQIVTHFDRKWLTERDVHLHGT
Sbjct: 172 ETKEDSNLIEAKIKVKYHYSGFLLANIKIFDEEGNKFIIQIVTHFDRKWLTERDVHLHGT 231
Query: 121 FKRQAATTFDEFKPDSEQFFFDGNEAISSEFLNSGSQRDSKLKIKIVALKFIIIINDKEA 180
FKRQAATTFDEFKPDSEQFFFDGNEAISSEFLNSGSQRDSKLKIKIVALKFIIIINDKEA
Sbjct: 232 FKRQAATTFDEFKPDSEQFFFDGNEAISSEFLNSGSQRDSKLKIKIVALKFIIIINDKEA 291
Query: 181 TSSKEDKLKSKTLNEDGMDADELRPLKIH 210
TSSKEDKLKSKTLNEDGMDADELRPLKIH
Sbjct: 292 TSSKEDKLKSKTLNEDGMDADELRPLKIH 320
BLAST of Cmc02g0042261 vs. NCBI nr
Match:
TYK23598.1 (hypothetical protein E5676_scaffold500G001100 [Cucumis melo var. makuwa])
HSP 1 Score: 275.8 bits (704), Expect = 4.3e-70
Identity = 155/300 (51.67%), Postives = 204/300 (68.00%), Query Frame = 0
Query: 2 VGKYFVKFEKWSYSLHASPKLIPSYGGWTTFKEISLYMWNMTTFQQIGKLCWGFIKIVDE 61
VGKY V+FEKWS + HA+PKLIPSYGGWTTF+ I L++WNMTTFQQIGK C G IK+ +E
Sbjct: 262 VGKYSVRFEKWSSAYHATPKLIPSYGGWTTFRGIPLHLWNMTTFQQIGKACGGLIKVAEE 321
Query: 62 TKEGSNLIEAKIKVRYHYSGFLLANIKIFDEEGNKFIIQIVTHFDRKWLTERDVHLHGTF 121
TK NLIEA+IKVRY+YSGFL AN++IFD EGNKF IQ+VTH + KWL ER+V LHGTF
Sbjct: 322 TKSAKNLIEARIKVRYNYSGFLPANVRIFDNEGNKFSIQVVTHPEGKWLIERNVRLHGTF 381
Query: 122 KRQAATTFDEFKPDSEQFFFDGNEAISSEFLNSGS-QRDSKLKIKIVALKFIIIINDKEA 181
KRQAA TFD+F P+SEQFFF+G EAIS +FL++ S R S + ALK +II D+ A
Sbjct: 382 KRQAAATFDDFNPESEQFFFEGMEAISPDFLSTSSDDRKSSTPDQPSALKSVIIKPDRAA 441
Query: 182 TSSKEDKLKSKTLNEDGMDADELRPLKIHMMEH------WIKENEKLSISVENDTSFIKP 241
TS L + +N+ + A + K+ ++ K +K+ I ++ +++
Sbjct: 442 TS--PSFLNEEVVNDSNLHA-TVNKSKLEILPGISNDGVLDKGKQKVDIQLQPNSALNLD 501
Query: 242 NSKRKISFNSLKNKTNYYN-----SKNVPSIRSPNRKQKVNGERSSRRETSLMQYIVKSN 290
SKRK+SFNS NKTN +N + + PS+ SP +KQKV+ ERS ++ Q K+N
Sbjct: 502 KSKRKVSFNSPCNKTNIFNPDSAPANHSPSLSSPEKKQKVSRERSIKKRLPSTQPNSKAN 558
BLAST of Cmc02g0042261 vs. NCBI nr
Match:
TYJ99315.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])
HSP 1 Score: 272.3 bits (695), Expect = 4.7e-69
Identity = 151/300 (50.33%), Postives = 205/300 (68.33%), Query Frame = 0
Query: 2 VGKYFVKFEKWSYSLHASPKLIPSYGGWTTFKEISLYMWNMTTFQQIGKLCWGFIKIVDE 61
VGKY V+FEKWS HA+PKLIPSYGGWTTF+ I L++WNM TFQQIGK C G IK+ +E
Sbjct: 318 VGKYSVRFEKWSPVYHATPKLIPSYGGWTTFRGIPLHLWNMMTFQQIGKACEGLIKVAEE 377
Query: 62 TKEGSNLIEAKIKVRYHYSGFLLANIKIFDEEGNKFIIQIVTHFDRKWLTERDVHLHGTF 121
T+ NLIEA+IKVRY+YSGFL AN++IFD EGNKF +Q+VTH + KWL ER+V LHGTF
Sbjct: 378 TRSAKNLIEARIKVRYNYSGFLPANVRIFDNEGNKFFVQVVTHPEGKWLIERNVRLHGTF 437
Query: 122 KRQAATTFDEFKPDSEQFFFDGNEAISSEFLNSGSQ-RDSKLKIKIVALKFIIIINDKEA 181
KRQAA +FD+F P+SEQFFF+G+EAIS +FL++ S R S + ALK +II D+ A
Sbjct: 438 KRQAAASFDDFNPESEQFFFEGSEAISPDFLSTSSDGRKSSTPDQPSALKSVIIKPDRNA 497
Query: 182 TSSKEDKLKSKTLNEDGMDADELRPLKIHMMEH------WIKENEKLSISVENDTSFIKP 241
T L + +N+ + A + K+ ++ K +K+ I ++ +++
Sbjct: 498 T--LPSFLNEELVNDSNLHATANKS-KLEILSGISNDGVLDKGKQKVDIQLQPNSALNLD 557
Query: 242 NSKRKISFNSLKNKTNYYN-----SKNVPSIRSPNRKQKVNGERSSRRETSLMQYIVKSN 290
SKRK+SFNS NKTN +N + + PS+ SP +KQKV+ ERS ++++S Q K+N
Sbjct: 558 KSKRKVSFNSPSNKTNIFNPDSAPANHSPSLNSPEKKQKVSRERSIKKKSSSTQPNSKAN 614
BLAST of Cmc02g0042261 vs. NCBI nr
Match:
KAA0039309.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])
HSP 1 Score: 271.6 bits (693), Expect = 8.1e-69
Identity = 150/294 (51.02%), Postives = 203/294 (69.05%), Query Frame = 0
Query: 2 VGKYFVKFEKWSYSLHASPKLIPSYGGWTTFKEISLYMWNMTTFQQIGKLCWGFIKIVDE 61
VGKY V+FEKW+ + HASPKLIPSYGGWTTF+ I L++WNM TFQQIGK C G IK+ +E
Sbjct: 264 VGKYTVRFEKWAPASHASPKLIPSYGGWTTFRGIPLHLWNMMTFQQIGKACGGLIKVAEE 323
Query: 62 TKEGSNLIEAKIKVRYHYSGFLLANIKIFDEEGNKFIIQIVTHFDRKWLTERDVHLHGTF 121
TK NLIEAK+K+RY+YSGFL A +KIFD+EGNKF++Q+VTH + KWL ER+V LHGTF
Sbjct: 324 TKTARNLIEAKLKIRYNYSGFLPAYVKIFDQEGNKFVVQVVTHSEGKWLMERNVRLHGTF 383
Query: 122 KRQAATTFDEFKPDSEQFFFDGNEAISSEFLNS-GSQRDSKLKIKIVALKFIIIINDKEA 181
KRQAA +FD+F PDSEQF FDG EAIS + LN+ R S + ALK +II K A
Sbjct: 384 KRQAAASFDDFNPDSEQFLFDGLEAISPDLLNTISGSRKSISPEQPSALKSVIIKPAKYA 443
Query: 182 TSSKEDKLKSKTLNEDGMDA----DELRPLK-IHMMEHWIKENEKLSISVENDTSFIKPN 241
TS L + +N++ + A +L+ L I K +K+ I + ++FI
Sbjct: 444 TS--PTTLNEEVVNDNSLHATANKSKLKILSGISNDGSLDKGKQKVDIPSQLTSAFIFYK 503
Query: 242 SKRKISFNSLKNKTNYYNSKNVPSIRSPNRKQKVNGERSSRRETSLMQYIVKSN 290
KRK+SFNS NKT ++N + P+ SP +K++V+ ERS ++++S +Q +++N
Sbjct: 504 PKRKVSFNSPSNKTTFFNPDSAPANHSPEKKKRVSRERSVKKKSSTIQPKLRAN 555
BLAST of Cmc02g0042261 vs. NCBI nr
Match:
TYK00493.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])
HSP 1 Score: 271.6 bits (693), Expect = 8.1e-69
Identity = 150/294 (51.02%), Postives = 203/294 (69.05%), Query Frame = 0
Query: 2 VGKYFVKFEKWSYSLHASPKLIPSYGGWTTFKEISLYMWNMTTFQQIGKLCWGFIKIVDE 61
VGKY V+FEKW+ + HASPKLIPSYGGWTTF+ I L++WNM TFQQIGK C G IK+ +E
Sbjct: 264 VGKYTVRFEKWAPASHASPKLIPSYGGWTTFRGIPLHLWNMMTFQQIGKACGGLIKVAEE 323
Query: 62 TKEGSNLIEAKIKVRYHYSGFLLANIKIFDEEGNKFIIQIVTHFDRKWLTERDVHLHGTF 121
TK NLIEAK+K+RY+YSGFL A +KIFD+EGNKF++Q+VTH + KWL ER+V LHGTF
Sbjct: 324 TKTARNLIEAKLKIRYNYSGFLPAYVKIFDQEGNKFVVQVVTHSEGKWLMERNVRLHGTF 383
Query: 122 KRQAATTFDEFKPDSEQFFFDGNEAISSEFLNS-GSQRDSKLKIKIVALKFIIIINDKEA 181
KRQAA +FD+F PDSEQF FDG EAIS + LN+ R S + ALK +II K A
Sbjct: 384 KRQAAASFDDFNPDSEQFLFDGLEAISPDLLNTISGSRKSISPEQPSALKSVIIKPAKYA 443
Query: 182 TSSKEDKLKSKTLNEDGMDA----DELRPLK-IHMMEHWIKENEKLSISVENDTSFIKPN 241
TS L + +N++ + A +L+ L I K +K+ I + ++FI
Sbjct: 444 TS--PTTLNEEVVNDNSLHATANKSKLKILSGISNDGSLDKGKQKVDIPSQLTSAFIFYK 503
Query: 242 SKRKISFNSLKNKTNYYNSKNVPSIRSPNRKQKVNGERSSRRETSLMQYIVKSN 290
KRK+SFNS NKT ++N + P+ SP +K++V+ ERS ++++S +Q +++N
Sbjct: 504 PKRKVSFNSPSNKTTFFNPDSAPANHSPEKKKRVSRERSVKKKSSTIQPKLRAN 555
BLAST of Cmc02g0042261 vs. ExPASy TrEMBL
Match:
A0A5D3CTA3 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1121G00580 PE=4 SV=1)
HSP 1 Score: 418.3 bits (1074), Expect = 2.6e-113
Identity = 205/209 (98.09%), Postives = 207/209 (99.04%), Query Frame = 0
Query: 1 MVGKYFVKFEKWSYSLHASPKLIPSYGGWTTFKEISLYMWNMTTFQQIGKLCWGFIKIVD 60
MVGKYFVKFEKWSYSLHASPKLIPSYGGWTTF+EISLYMWNMTTFQQI KLCWGFIKIVD
Sbjct: 112 MVGKYFVKFEKWSYSLHASPKLIPSYGGWTTFREISLYMWNMTTFQQIEKLCWGFIKIVD 171
Query: 61 ETKEGSNLIEAKIKVRYHYSGFLLANIKIFDEEGNKFIIQIVTHFDRKWLTERDVHLHGT 120
ETKE SNLIEAKIKV+YHYSGFLLANIKIFDEEGNKFIIQIVTHFDRKWLTERDVHLHGT
Sbjct: 172 ETKEDSNLIEAKIKVKYHYSGFLLANIKIFDEEGNKFIIQIVTHFDRKWLTERDVHLHGT 231
Query: 121 FKRQAATTFDEFKPDSEQFFFDGNEAISSEFLNSGSQRDSKLKIKIVALKFIIIINDKEA 180
FKRQAATTFDEFKPDSEQFFFDGNEAISSEFLNSGSQRDSKLKIKIVALKFIIIINDKEA
Sbjct: 232 FKRQAATTFDEFKPDSEQFFFDGNEAISSEFLNSGSQRDSKLKIKIVALKFIIIINDKEA 291
Query: 181 TSSKEDKLKSKTLNEDGMDADELRPLKIH 210
TSSKEDKLKSKTLNEDGMDADELRPLKIH
Sbjct: 292 TSSKEDKLKSKTLNEDGMDADELRPLKIH 320
BLAST of Cmc02g0042261 vs. ExPASy TrEMBL
Match:
A0A5D3DJE1 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G001100 PE=4 SV=1)
HSP 1 Score: 275.8 bits (704), Expect = 2.1e-70
Identity = 155/300 (51.67%), Postives = 204/300 (68.00%), Query Frame = 0
Query: 2 VGKYFVKFEKWSYSLHASPKLIPSYGGWTTFKEISLYMWNMTTFQQIGKLCWGFIKIVDE 61
VGKY V+FEKWS + HA+PKLIPSYGGWTTF+ I L++WNMTTFQQIGK C G IK+ +E
Sbjct: 262 VGKYSVRFEKWSSAYHATPKLIPSYGGWTTFRGIPLHLWNMTTFQQIGKACGGLIKVAEE 321
Query: 62 TKEGSNLIEAKIKVRYHYSGFLLANIKIFDEEGNKFIIQIVTHFDRKWLTERDVHLHGTF 121
TK NLIEA+IKVRY+YSGFL AN++IFD EGNKF IQ+VTH + KWL ER+V LHGTF
Sbjct: 322 TKSAKNLIEARIKVRYNYSGFLPANVRIFDNEGNKFSIQVVTHPEGKWLIERNVRLHGTF 381
Query: 122 KRQAATTFDEFKPDSEQFFFDGNEAISSEFLNSGS-QRDSKLKIKIVALKFIIIINDKEA 181
KRQAA TFD+F P+SEQFFF+G EAIS +FL++ S R S + ALK +II D+ A
Sbjct: 382 KRQAAATFDDFNPESEQFFFEGMEAISPDFLSTSSDDRKSSTPDQPSALKSVIIKPDRAA 441
Query: 182 TSSKEDKLKSKTLNEDGMDADELRPLKIHMMEH------WIKENEKLSISVENDTSFIKP 241
TS L + +N+ + A + K+ ++ K +K+ I ++ +++
Sbjct: 442 TS--PSFLNEEVVNDSNLHA-TVNKSKLEILPGISNDGVLDKGKQKVDIQLQPNSALNLD 501
Query: 242 NSKRKISFNSLKNKTNYYN-----SKNVPSIRSPNRKQKVNGERSSRRETSLMQYIVKSN 290
SKRK+SFNS NKTN +N + + PS+ SP +KQKV+ ERS ++ Q K+N
Sbjct: 502 KSKRKVSFNSPCNKTNIFNPDSAPANHSPSLSSPEKKQKVSRERSIKKRLPSTQPNSKAN 558
BLAST of Cmc02g0042261 vs. ExPASy TrEMBL
Match:
A0A5D3BLV7 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005290 PE=4 SV=1)
HSP 1 Score: 272.3 bits (695), Expect = 2.3e-69
Identity = 151/300 (50.33%), Postives = 205/300 (68.33%), Query Frame = 0
Query: 2 VGKYFVKFEKWSYSLHASPKLIPSYGGWTTFKEISLYMWNMTTFQQIGKLCWGFIKIVDE 61
VGKY V+FEKWS HA+PKLIPSYGGWTTF+ I L++WNM TFQQIGK C G IK+ +E
Sbjct: 318 VGKYSVRFEKWSPVYHATPKLIPSYGGWTTFRGIPLHLWNMMTFQQIGKACEGLIKVAEE 377
Query: 62 TKEGSNLIEAKIKVRYHYSGFLLANIKIFDEEGNKFIIQIVTHFDRKWLTERDVHLHGTF 121
T+ NLIEA+IKVRY+YSGFL AN++IFD EGNKF +Q+VTH + KWL ER+V LHGTF
Sbjct: 378 TRSAKNLIEARIKVRYNYSGFLPANVRIFDNEGNKFFVQVVTHPEGKWLIERNVRLHGTF 437
Query: 122 KRQAATTFDEFKPDSEQFFFDGNEAISSEFLNSGSQ-RDSKLKIKIVALKFIIIINDKEA 181
KRQAA +FD+F P+SEQFFF+G+EAIS +FL++ S R S + ALK +II D+ A
Sbjct: 438 KRQAAASFDDFNPESEQFFFEGSEAISPDFLSTSSDGRKSSTPDQPSALKSVIIKPDRNA 497
Query: 182 TSSKEDKLKSKTLNEDGMDADELRPLKIHMMEH------WIKENEKLSISVENDTSFIKP 241
T L + +N+ + A + K+ ++ K +K+ I ++ +++
Sbjct: 498 T--LPSFLNEELVNDSNLHATANKS-KLEILSGISNDGVLDKGKQKVDIQLQPNSALNLD 557
Query: 242 NSKRKISFNSLKNKTNYYN-----SKNVPSIRSPNRKQKVNGERSSRRETSLMQYIVKSN 290
SKRK+SFNS NKTN +N + + PS+ SP +KQKV+ ERS ++++S Q K+N
Sbjct: 558 KSKRKVSFNSPSNKTNIFNPDSAPANHSPSLNSPEKKQKVSRERSIKKKSSSTQPNSKAN 614
BLAST of Cmc02g0042261 vs. ExPASy TrEMBL
Match:
A0A5A7TDG1 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G001050 PE=4 SV=1)
HSP 1 Score: 271.6 bits (693), Expect = 3.9e-69
Identity = 150/294 (51.02%), Postives = 203/294 (69.05%), Query Frame = 0
Query: 2 VGKYFVKFEKWSYSLHASPKLIPSYGGWTTFKEISLYMWNMTTFQQIGKLCWGFIKIVDE 61
VGKY V+FEKW+ + HASPKLIPSYGGWTTF+ I L++WNM TFQQIGK C G IK+ +E
Sbjct: 264 VGKYTVRFEKWAPASHASPKLIPSYGGWTTFRGIPLHLWNMMTFQQIGKACGGLIKVAEE 323
Query: 62 TKEGSNLIEAKIKVRYHYSGFLLANIKIFDEEGNKFIIQIVTHFDRKWLTERDVHLHGTF 121
TK NLIEAK+K+RY+YSGFL A +KIFD+EGNKF++Q+VTH + KWL ER+V LHGTF
Sbjct: 324 TKTARNLIEAKLKIRYNYSGFLPAYVKIFDQEGNKFVVQVVTHSEGKWLMERNVRLHGTF 383
Query: 122 KRQAATTFDEFKPDSEQFFFDGNEAISSEFLNS-GSQRDSKLKIKIVALKFIIIINDKEA 181
KRQAA +FD+F PDSEQF FDG EAIS + LN+ R S + ALK +II K A
Sbjct: 384 KRQAAASFDDFNPDSEQFLFDGLEAISPDLLNTISGSRKSISPEQPSALKSVIIKPAKYA 443
Query: 182 TSSKEDKLKSKTLNEDGMDA----DELRPLK-IHMMEHWIKENEKLSISVENDTSFIKPN 241
TS L + +N++ + A +L+ L I K +K+ I + ++FI
Sbjct: 444 TS--PTTLNEEVVNDNSLHATANKSKLKILSGISNDGSLDKGKQKVDIPSQLTSAFIFYK 503
Query: 242 SKRKISFNSLKNKTNYYNSKNVPSIRSPNRKQKVNGERSSRRETSLMQYIVKSN 290
KRK+SFNS NKT ++N + P+ SP +K++V+ ERS ++++S +Q +++N
Sbjct: 504 PKRKVSFNSPSNKTTFFNPDSAPANHSPEKKKRVSRERSVKKKSSTIQPKLRAN 555
BLAST of Cmc02g0042261 vs. ExPASy TrEMBL
Match:
A0A5D3BL61 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001020 PE=4 SV=1)
HSP 1 Score: 271.6 bits (693), Expect = 3.9e-69
Identity = 150/294 (51.02%), Postives = 203/294 (69.05%), Query Frame = 0
Query: 2 VGKYFVKFEKWSYSLHASPKLIPSYGGWTTFKEISLYMWNMTTFQQIGKLCWGFIKIVDE 61
VGKY V+FEKW+ + HASPKLIPSYGGWTTF+ I L++WNM TFQQIGK C G IK+ +E
Sbjct: 264 VGKYTVRFEKWAPASHASPKLIPSYGGWTTFRGIPLHLWNMMTFQQIGKACGGLIKVAEE 323
Query: 62 TKEGSNLIEAKIKVRYHYSGFLLANIKIFDEEGNKFIIQIVTHFDRKWLTERDVHLHGTF 121
TK NLIEAK+K+RY+YSGFL A +KIFD+EGNKF++Q+VTH + KWL ER+V LHGTF
Sbjct: 324 TKTARNLIEAKLKIRYNYSGFLPAYVKIFDQEGNKFVVQVVTHSEGKWLMERNVRLHGTF 383
Query: 122 KRQAATTFDEFKPDSEQFFFDGNEAISSEFLNS-GSQRDSKLKIKIVALKFIIIINDKEA 181
KRQAA +FD+F PDSEQF FDG EAIS + LN+ R S + ALK +II K A
Sbjct: 384 KRQAAASFDDFNPDSEQFLFDGLEAISPDLLNTISGSRKSISPEQPSALKSVIIKPAKYA 443
Query: 182 TSSKEDKLKSKTLNEDGMDA----DELRPLK-IHMMEHWIKENEKLSISVENDTSFIKPN 241
TS L + +N++ + A +L+ L I K +K+ I + ++FI
Sbjct: 444 TS--PTTLNEEVVNDNSLHATANKSKLKILSGISNDGSLDKGKQKVDIPSQLTSAFIFYK 503
Query: 242 SKRKISFNSLKNKTNYYNSKNVPSIRSPNRKQKVNGERSSRRETSLMQYIVKSN 290
KRK+SFNS NKT ++N + P+ SP +K++V+ ERS ++++S +Q +++N
Sbjct: 504 PKRKVSFNSPSNKTTFFNPDSAPANHSPEKKKRVSRERSVKKKSSTIQPKLRAN 555
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAA0038838.1 | 5.3e-113 | 98.09 | hypothetical protein E6C27_scaffold2487G00040 [Cucumis melo var. makuwa] >TYK142... | [more] |
| TYK23598.1 | 4.3e-70 | 51.67 | hypothetical protein E5676_scaffold500G001100 [Cucumis melo var. makuwa] | [more] |
| TYJ99315.1 | 4.7e-69 | 50.33 | LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | [more] |
| KAA0039309.1 | 8.1e-69 | 51.02 | LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | [more] |
| TYK00493.1 | 8.1e-69 | 51.02 | LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3CTA3 | 2.6e-113 | 98.09 | DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
| A0A5D3DJE1 | 2.1e-70 | 51.67 | DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
| A0A5D3BLV7 | 2.3e-69 | 50.33 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... | [more] |
| A0A5A7TDG1 | 3.9e-69 | 51.02 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... | [more] |
| A0A5D3BL61 | 3.9e-69 | 51.02 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
