Cmc02g0042181 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc02g0042181
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein, putative
Location	CMiso1.1chr02: 3779811 .. 3781475 (-)
RNA-Seq Expression	Cmc02g0042181
Synteny	Cmc02g0042181

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTAAGACAGACTATCATTTCATAAGAAGACACACTATCCTTTCACATGATAAAATGGCTAATTGATAAATGCAAAGAATCACTTGTCTCTCCCCTCTCTACCATCAACCCATTCCCTCTCTTTTCAACACCTTTGTTTCTCACCTTCTTTCTTCCCCTTCAAGTTCAGTGTTAAAGTGACGGTCCAAATCACATAACACCAAAAAAGGAGCAACCCCATCATCCCATCTTCCTCTCTTTTTCTCTTCACCATTTCCATGGCTTCTAATTTAGCAACTTTCTCTTTCATCTGCAACTTCCTTCTCCTTCTAGCTTCTTTTGCTGCCTCAAACATAGACCAAGACAGAACAGAGTGCTCGGACCAACTCATCGGCCTCGCCCCATGCTTGCCGTATGTCAGCGGTGATGCCAAGACACCAACCATTGATTGCTGCAGTGGATTGAAGCAGGTGGTGCAGAAGAGCAAGAAGTGTCTATGTGTCCTTATTAAAGACAAAGATGACCCTAATCTTGGCCTTAAAATCAATGGCTCCCTTGCTTTGGCCCTCCCTCATGCCTGCCATGCCCCTGCCAACATCACTGAGTGCATCTGTGAGCAAACTAATCCCTTGCCTTTTTCTCTTTCACTCTCTGTTTTGTTATACCAATGATATTTCATAAACTCTTTGTATACTAGAAAAAATTGGAGCTTAACGAATTCATGTTGTCTCCCTTAGTTTCAAGAGTAGTTGTCTCTAAGTACAGAAGAAATTACATTTCTTATGGAAGCAACGCATCGTTTACCAAGGAAATTAAATTTCATAGATGATAGAAGAAAAGTGGAGATGAAAAACAAGTAGTTCCAATTTGAAGAAGAGACTATGTATAGACTAATTTATCATCGTCCCAATACTCGTGTCTCTTCTTGATGTCTGGTTAATATTTTTCTCTTGGGCATTTTTCTCAAACATTTATATGTACACAAGTTTCATGGCCATTCACTTGTATTTCTCAGTTGGGCGTTGTGTCAAACACCTTGAGTGCTTCTGTTCCATGTACACAAATTTCTTGGATTTTCTCCTATTTCTCGTCTGGGGATTTTGTCAAACACCTAAGCTTCTGGGCATTTAACATTGTGTTTTGGATATGGTTTTTCAGCTCTTTTGCACTTATCACCAAATTCAACAGAAGCAAAGATATTCAAAGAATCTAATCCCACCAGTGAACCAAGCAGTTCTCCAGATACCAAAGGTAAAAACCAAATTTCTAAACTCTATCTAACTTAAAAGAAAGTATTATTCATTATTACCTTAGTGTGAGTAAATTTTGATTTACAGTTCATGGGAGTTCGTCCGCTGCAAACGAGAAAAGCGACGGTGGAATGGGGAAGAGATGGATTGGAGGAACAGAGATGATTATGAAGATTTTGCTAGGATTCTTCATTCTATCGCATCTTAATCTAATGTTCATCTAAATATAGCAGAACGAAACTGTTTGTAATTTATGAGGGTTTCTTGATTCATCCTGCAATATGCTGTGCCAGTTTTCTTATATTGTTTAGAACAGAACATAAGAGGAATTTCAAGTTTTTTCTTTCCCTTCAAGTTTCCATGGAACCTTAATTGTATACAAATTCTATCATTTCTAGAATGTGTTTTACATACCTTTTTACCCAAATCTTCAAGT

mRNA sequence

GCTAAGACAGACTATCATTTCATAAGAAGACACACTATCCTTTCACATGATAAAATGGCTAATTGATAAATGCAAAGAATCACTTGTCTCTCCCCTCTCTACCATCAACCCATTCCCTCTCTTTTCAACACCTTTGTTTCTCACCTTCTTTCTTCCCCTTCAAGTTCAGTGTTAAAGTGACGGTCCAAATCACATAACACCAAAAAAGGAGCAACCCCATCATCCCATCTTCCTCTCTTTTTCTCTTCACCATTTCCATGGCTTCTAATTTAGCAACTTTCTCTTTCATCTGCAACTTCCTTCTCCTTCTAGCTTCTTTTGCTGCCTCAAACATAGACCAAGACAGAACAGAGTGCTCGGACCAACTCATCGGCCTCGCCCCATGCTTGCCGTATGTCAGCGGTGATGCCAAGACACCAACCATTGATTGCTGCAGTGGATTGAAGCAGGTGGTGCAGAAGAGCAAGAAGTGTCTATGTGTCCTTATTAAAGACAAAGATGACCCTAATCTTGGCCTTAAAATCAATGGCTCCCTTGCTTTGGCCCTCCCTCATGCCTGCCATGCCCCTGCCAACATCACTGAGTGCATCTCTCTTTTGCACTTATCACCAAATTCAACAGAAGCAAAGATATTCAAAGAATCTAATCCCACCAGTGAACCAAGCAGTTCTCCAGATACCAAAGTTCATGGGAGTTCGTCCGCTGCAAACGAGAAAAGCGACGGTGGAATGGGGAAGAGATGGATTGGAGGAACAGAGATGATTATGAAGATTTTGCTAGGATTCTTCATTCTATCGCATCTTAATCTAATGTTCATCTAAATATAGCAGAACGAAACTGTTTGTAATTTATGAGGGTTTCTTGATTCATCCTGCAATATGCTGTGCCAGTTTTCTTATATTGTTTAGAACAGAACATAAGAGGAATTTCAAGTTTTTTCTTTCCCTTCAAGTTTCCATGGAACCTTAATTGTATACAAATTCTATCATTTCTAGAATGTGTTTTACATACCTTTTTACCCAAATCTTCAAGT

Coding sequence (CDS)

ATGGCTTCTAATTTAGCAACTTTCTCTTTCATCTGCAACTTCCTTCTCCTTCTAGCTTCTTTTGCTGCCTCAAACATAGACCAAGACAGAACAGAGTGCTCGGACCAACTCATCGGCCTCGCCCCATGCTTGCCGTATGTCAGCGGTGATGCCAAGACACCAACCATTGATTGCTGCAGTGGATTGAAGCAGGTGGTGCAGAAGAGCAAGAAGTGTCTATGTGTCCTTATTAAAGACAAAGATGACCCTAATCTTGGCCTTAAAATCAATGGCTCCCTTGCTTTGGCCCTCCCTCATGCCTGCCATGCCCCTGCCAACATCACTGAGTGCATCTCTCTTTTGCACTTATCACCAAATTCAACAGAAGCAAAGATATTCAAAGAATCTAATCCCACCAGTGAACCAAGCAGTTCTCCAGATACCAAAGTTCATGGGAGTTCGTCCGCTGCAAACGAGAAAAGCGACGGTGGAATGGGGAAGAGATGGATTGGAGGAACAGAGATGATTATGAAGATTTTGCTAGGATTCTTCATTCTATCGCATCTTAATCTAATGTTCATCTAA

Protein sequence

MASNLATFSFICNFLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNSTEAKIFKESNPTSEPSSSPDTKVHGSSSAANEKSDGGMGKRWIGGTEMIMKILLGFFILSHLNLMFI

Homology

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BLAST of Cmc02g0042181 vs. NCBI nr
Match: XP_008451096.1 (PREDICTED: protein YLS3-like [Cucumis melo] >KAA0055642.1 protein YLS3-like [Cucumis melo var. makuwa] >TYK09896.1 protein YLS3-like [Cucumis melo var. makuwa])

HSP 1 Score: 368.2 bits (944), Expect = 4.1e-98
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MASNLATFSFICNFLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCS 60
           MASNLATFSFICNFLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCS
Sbjct: 1   MASNLATFSFICNFLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCS 60

Query: 61  GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNS 120
           GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNS
Sbjct: 61  GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNS 120

Query: 121 TEAKIFKESNPTSEPSSSPDTKVHGSSSAANEKSDGGMGKRWIGGTEMIMKILLGFFILS 180
           TEAKIFKESNPTSEPSSSPDTKVHGSSSAANEKSDGGMGKRWIGGTEMIMKILLGFFILS
Sbjct: 121 TEAKIFKESNPTSEPSSSPDTKVHGSSSAANEKSDGGMGKRWIGGTEMIMKILLGFFILS 180

Query: 181 HLNLMFI 188
           HLNLMFI
Sbjct: 181 HLNLMFI 187

[Close]

BLAST of Cmc02g0042181 vs. NCBI nr
Match: XP_004144111.1 (protein YLS3 isoform X1 [Cucumis sativus] >KGN66415.1 hypothetical protein Csa_007242 [Cucumis sativus])

HSP 1 Score: 353.6 bits (906), Expect = 1.0e-93
Identity = 179/187 (95.72%), Postives = 184/187 (98.40%), Query Frame = 0


Query: 1   MASNLATFSFICNFLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCS 60
           MAS L+TFSFICNFLLLLASF+AS+IDQDRT+CSDQLIGLA CLPYVSGDAKTPTIDCCS
Sbjct: 1   MASALSTFSFICNFLLLLASFSASDIDQDRTDCSDQLIGLAQCLPYVSGDAKTPTIDCCS 60

Query: 61  GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNS 120
           GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNS
Sbjct: 61  GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNS 120

Query: 121 TEAKIFKESNPTSEPSSSPDTKVHGSSSAANEKSDGGMGKRWIGGTEMIMKILLGFFILS 180
           TEAKIFKESNPTSEPSSSPDTKVHGSSS ANEKSDGGMGKRWIGGTEMI+KILLGFFILS
Sbjct: 121 TEAKIFKESNPTSEPSSSPDTKVHGSSSVANEKSDGGMGKRWIGGTEMIVKILLGFFILS 180

Query: 181 HLNLMFI 188
           HLNLMFI
Sbjct: 181 HLNLMFI 187

[Close]

BLAST of Cmc02g0042181 vs. NCBI nr
Match: XP_038878589.1 (non-specific lipid transfer protein GPI-anchored 6-like [Benincasa hispida])

HSP 1 Score: 346.3 bits (887), Expect = 1.7e-91
Identity = 177/187 (94.65%), Postives = 178/187 (95.19%), Query Frame = 0


Query: 1   MASNLATFSFICNFLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCS 60
           MASNLA FS  CNFLLLLASFAASNIDQDRTECSDQL GLAPCLPYVSGDAKTPTIDCCS
Sbjct: 1   MASNLAAFSLFCNFLLLLASFAASNIDQDRTECSDQLTGLAPCLPYVSGDAKTPTIDCCS 60

Query: 61  GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNS 120
           GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALP+ CHAPANITECISLLHLSPNS
Sbjct: 61  GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPNDCHAPANITECISLLHLSPNS 120

Query: 121 TEAKIFKESNPTSEPSSSPDTKVHGSSSAANEKSDGGMGKRWIGGTEMIMKILLGFFILS 180
           TEAKIFKESNPTS PSSSPDTKVHGSSS ANEKSDGGMGKRWIG TEMIM ILLGFFILS
Sbjct: 121 TEAKIFKESNPTSGPSSSPDTKVHGSSSTANEKSDGGMGKRWIGSTEMIMGILLGFFILS 180

Query: 181 HLNLMFI 188
           HLNLMFI
Sbjct: 181 HLNLMFI 187

[Close]

BLAST of Cmc02g0042181 vs. NCBI nr
Match: XP_023515387.1 (protein YLS3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 302.0 bits (772), Expect = 3.6e-78
Identity = 159/184 (86.41%), Postives = 167/184 (90.76%), Query Frame = 0


Query: 5   LATFSFICNFLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQ 64
           +A F F    LLLLA FAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQ
Sbjct: 1   MALFVFCNLLLLLLAPFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQ 60

Query: 65  VVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNSTEAK 124
           VVQKSKKCLCVLIKDKDDPNLGLKINGSLAL LP+ACHAP+NITECISLLHL+PNSTEAK
Sbjct: 61  VVQKSKKCLCVLIKDKDDPNLGLKINGSLALGLPNACHAPSNITECISLLHLAPNSTEAK 120

Query: 125 IFKESNPTSEPSSSPDTKVHGSSSAANEKSDGGMGKRWIGGTEMIMKILLGFFILSHLN- 184
           IFKESN TSEPSS+PD+KVHGSSS ANEKSDGG  K+ IGG  MIM+ILLGFFILSHLN 
Sbjct: 121 IFKESNSTSEPSSAPDSKVHGSSSTANEKSDGGTRKKPIGGAGMIMEILLGFFILSHLNS 180

Query: 185 LMFI 188
           L FI
Sbjct: 181 LKFI 184

[Close]

BLAST of Cmc02g0042181 vs. NCBI nr
Match: XP_022960972.1 (protein YLS3-like [Cucurbita moschata] >KAG6590243.1 Protein YLS3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023884.1 Protein YLS3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 301.6 bits (771), Expect = 4.7e-78
Identity = 158/184 (85.87%), Postives = 167/184 (90.76%), Query Frame = 0


Query: 5   LATFSFICNFLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQ 64
           +A F F    LLLLA FAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQ
Sbjct: 1   MALFVFCNLLLLLLAPFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQ 60

Query: 65  VVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNSTEAK 124
           VVQKSKKCLCVLIKDKDDPNLGLKINGSLAL LP+ACHAP+NITECISLLHL+PNSTEAK
Sbjct: 61  VVQKSKKCLCVLIKDKDDPNLGLKINGSLALGLPNACHAPSNITECISLLHLAPNSTEAK 120

Query: 125 IFKESNPTSEPSSSPDTKVHGSSSAANEKSDGGMGKRWIGGTEMIMKILLGFFILSHL-N 184
           IFKESN TSEPSS+PD+KVHGS+S ANEKSDGG  K+ IGG  MIM+ILLGFFILSHL N
Sbjct: 121 IFKESNSTSEPSSAPDSKVHGSASTANEKSDGGTSKKPIGGAGMIMEILLGFFILSHLNN 180

Query: 185 LMFI 188
           L FI
Sbjct: 181 LKFI 184

[Close]

BLAST of Cmc02g0042181 vs. ExPASy Swiss-Prot
Match: F4I082 (Non-specific lipid transfer protein GPI-anchored 6 OS=Arabidopsis thaliana OX=3702 GN=LTPG6 PE=2 SV=2)

HSP 1 Score: 150.6 bits (379), Expect = 1.8e-35
Identity = 80/164 (48.78%), Postives = 112/164 (68.29%), Query Frame = 0


Query: 17  LLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQVVQKSKKCLCVL 76
           +L  F  S++ QDR EC++QLI L+ C+PYV GDAK PT DCC+G  QV++KS+KC+C+L
Sbjct: 17  MLLGFGNSDLAQDREECTNQLIELSTCIPYVGGDAKAPTKDCCAGFGQVIRKSEKCVCIL 76

Query: 77  IKDKDDPNLGLKINGSLALALPHACHAPA-NITECISLLHLSPNSTEAKIFKESNPTSEP 136
           ++DKDDP LG+KIN +LA  LP ACH  A NIT+CIS+LHL  NST AK F+      + 
Sbjct: 77  VRDKDDPQLGIKINATLAAHLPSACHITAPNITDCISILHLPRNSTLAKEFENLGRIEDN 136

Query: 137 -SSSPDTKVH----GSSSAANEKSDGGMGKRWIGGTEMIMKILL 175
            +S+  T++H    G   A   KS+G   K W+ G E+++ +L+
Sbjct: 137 YNSTSPTQIHKDGTGGGKAEPVKSNGWKEKSWL-GVELLIYLLV 179

[Close]

BLAST of Cmc02g0042181 vs. ExPASy Swiss-Prot
Match: O64865 (Non-specific lipid transfer protein GPI-anchored 14 OS=Arabidopsis thaliana OX=3702 GN=LTPG14 PE=2 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.5e-34
Identity = 78/185 (42.16%), Postives = 122/185 (65.95%), Query Frame = 0


Query: 22  AASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQVVQKSKKCLCVLIKDKD 81
           AA +  +D+ EC++QL+G+A CLPYV G AK+PT DCCSGLKQV+  +KKCLCV+I+D++
Sbjct: 24  AADDKTKDKEECTEQLVGMATCLPYVQGQAKSPTPDCCSGLKQVLNSNKKCLCVIIQDRN 83

Query: 82  DPNLGLKINGSLALALPHACHAPANITECISLLHLSPNSTEAKIF-------KESNPTSE 141
           DP+LGL+IN SLALALP  CHA A++T+C +LLHL PNS +A++F        ++ P S 
Sbjct: 84  DPDLGLQINVSLALALPSVCHAAADVTKCPALLHLDPNSPDAQVFYQLAKGLNKTGPASA 143

Query: 142 PS-SSPDTKVHGSSSAANEKSDGG-------------MGKRWIGGTEMIMKILLGFFILS 186
           P+ SSP       +S +++ ++ G               K+W+G     ++++  FF++ 
Sbjct: 144 PTGSSPGPISISPTSGSDDGNNSGRTTSVPGRNHAQSFYKQWLG-----LEVVFHFFVIF 203

[Close]

BLAST of Cmc02g0042181 vs. ExPASy Swiss-Prot
Match: O64864 (Non-specific lipid transfer protein GPI-anchored 13 OS=Arabidopsis thaliana OX=3702 GN=LTPG13 PE=2 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 6.9e-32
Identity = 74/190 (38.95%), Postives = 115/190 (60.53%), Query Frame = 0


Query: 17  LLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQVVQKSKKCLCVL 76
           ++   A ++  +D+ EC+ QL+G+A CLPYV G AK+PT DCCSGLKQV+    KCLC++
Sbjct: 20  MVVDAAGADKGKDKEECTAQLVGMATCLPYVQGKAKSPTPDCCSGLKQVINSDMKCLCMI 79

Query: 77  IKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNSTEAKIFKE-------- 136
           I++++DP+LGL++N SLALALP  CHA A+IT+C +LLHL PNS +A++F +        
Sbjct: 80  IQERNDPDLGLQVNVSLALALPSVCHATADITKCPALLHLDPNSPDAQVFYQLAKGLNET 139

Query: 137 ----------SNPT---SEPSSSPDTKVHGSSSAANEKSDGGMGKRWIGGTEMIMKILLG 186
                     S PT   S P SS       ++S           K+W+G     ++++  
Sbjct: 140 VSASAPTGSASEPTSMSSTPGSSAGNNSGRTTSVPGTNHAQSFSKQWLG-----LEVVAH 199

[Close]

BLAST of Cmc02g0042181 vs. ExPASy Swiss-Prot
Match: Q9M2G1 (Non-specific lipid transfer protein GPI-anchored 22 OS=Arabidopsis thaliana OX=3702 GN=LTPG22 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 2.6e-23
Identity = 60/156 (38.46%), Postives = 89/156 (57.05%), Query Frame = 0


Query: 11  ICNFLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQVVQK-- 70
           +C  + ++     S + QD   C D +  L  CLP+V+  AK P   CCS LK  + K  
Sbjct: 16  LCITVAVMFLGVRSELSQDIKGCQDAMSDLYSCLPFVTNKAKAPDSTCCSTLKVKIDKGQ 75

Query: 71  SKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNSTEAKIFKE 130
           ++KCLC L+KD+DDP LG K++ + A++LP ACH PANI++C  LLHL P+S  ++IFK+
Sbjct: 76  TRKCLCTLVKDRDDPGLGFKVDANRAMSLPSACHVPANISQCPDLLHLLPDSPASQIFKQ 135

Query: 131 SNPTSEPSSSPDTKVHGSSSAANEKSDGGMGKRWIG 165
              T   S +   K   +SS+   + +   G    G
Sbjct: 136 F--TESSSQTVGHKAVSTSSSIKGRDNKQFGLMMAG 169

[Close]

BLAST of Cmc02g0042181 vs. ExPASy Swiss-Prot
Match: Q9LJ86 (Non-specific lipid transfer protein GPI-anchored 5 OS=Arabidopsis thaliana OX=3702 GN=LTPG5 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 5.2e-11
Identity = 31/89 (34.83%), Postives = 55/89 (61.80%), Query Frame = 0


Query: 14  FLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQVVQKSKKCL 73
           FL +  +  +S +   ++ C++ LI ++PCL Y++G++ +P   CC+ L +VVQ S  CL
Sbjct: 9   FLTVFMAVMSSTMVSAQSSCTNALISMSPCLNYITGNSTSPNQQCCNQLSRVVQSSPDCL 68

Query: 74  CVLIKDKDDPNLGLKINGSLALALPHACH 103
           C ++ +     LG+ +N + AL LP AC+
Sbjct: 69  CQVL-NGGGSQLGINVNQTQALGLPRACN 96

[Close]

BLAST of Cmc02g0042181 vs. ExPASy TrEMBL
Match: A0A5A7UIG8 (Protein YLS3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G00060 PE=3 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 2.0e-98
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MASNLATFSFICNFLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCS 60
           MASNLATFSFICNFLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCS
Sbjct: 1   MASNLATFSFICNFLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCS 60

Query: 61  GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNS 120
           GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNS
Sbjct: 61  GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNS 120

Query: 121 TEAKIFKESNPTSEPSSSPDTKVHGSSSAANEKSDGGMGKRWIGGTEMIMKILLGFFILS 180
           TEAKIFKESNPTSEPSSSPDTKVHGSSSAANEKSDGGMGKRWIGGTEMIMKILLGFFILS
Sbjct: 121 TEAKIFKESNPTSEPSSSPDTKVHGSSSAANEKSDGGMGKRWIGGTEMIMKILLGFFILS 180

Query: 181 HLNLMFI 188
           HLNLMFI
Sbjct: 181 HLNLMFI 187

[Close]

BLAST of Cmc02g0042181 vs. ExPASy TrEMBL
Match: A0A1S3BRH1 (protein YLS3-like OS=Cucumis melo OX=3656 GN=LOC103492476 PE=3 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 2.0e-98
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MASNLATFSFICNFLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCS 60
           MASNLATFSFICNFLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCS
Sbjct: 1   MASNLATFSFICNFLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCS 60

Query: 61  GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNS 120
           GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNS
Sbjct: 61  GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNS 120

Query: 121 TEAKIFKESNPTSEPSSSPDTKVHGSSSAANEKSDGGMGKRWIGGTEMIMKILLGFFILS 180
           TEAKIFKESNPTSEPSSSPDTKVHGSSSAANEKSDGGMGKRWIGGTEMIMKILLGFFILS
Sbjct: 121 TEAKIFKESNPTSEPSSSPDTKVHGSSSAANEKSDGGMGKRWIGGTEMIMKILLGFFILS 180

Query: 181 HLNLMFI 188
           HLNLMFI
Sbjct: 181 HLNLMFI 187

[Close]

BLAST of Cmc02g0042181 vs. ExPASy TrEMBL
Match: A0A0A0LX07 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G602030 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 5.1e-94
Identity = 179/187 (95.72%), Postives = 184/187 (98.40%), Query Frame = 0


Query: 1   MASNLATFSFICNFLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCS 60
           MAS L+TFSFICNFLLLLASF+AS+IDQDRT+CSDQLIGLA CLPYVSGDAKTPTIDCCS
Sbjct: 1   MASALSTFSFICNFLLLLASFSASDIDQDRTDCSDQLIGLAQCLPYVSGDAKTPTIDCCS 60

Query: 61  GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNS 120
           GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNS
Sbjct: 61  GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNS 120

Query: 121 TEAKIFKESNPTSEPSSSPDTKVHGSSSAANEKSDGGMGKRWIGGTEMIMKILLGFFILS 180
           TEAKIFKESNPTSEPSSSPDTKVHGSSS ANEKSDGGMGKRWIGGTEMI+KILLGFFILS
Sbjct: 121 TEAKIFKESNPTSEPSSSPDTKVHGSSSVANEKSDGGMGKRWIGGTEMIVKILLGFFILS 180

Query: 181 HLNLMFI 188
           HLNLMFI
Sbjct: 181 HLNLMFI 187

[Close]

BLAST of Cmc02g0042181 vs. ExPASy TrEMBL
Match: A0A6J1H8W0 (protein YLS3-like OS=Cucurbita moschata OX=3662 GN=LOC111461612 PE=3 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 2.3e-78
Identity = 158/184 (85.87%), Postives = 167/184 (90.76%), Query Frame = 0


Query: 5   LATFSFICNFLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQ 64
           +A F F    LLLLA FAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQ
Sbjct: 1   MALFVFCNLLLLLLAPFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQ 60

Query: 65  VVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNSTEAK 124
           VVQKSKKCLCVLIKDKDDPNLGLKINGSLAL LP+ACHAP+NITECISLLHL+PNSTEAK
Sbjct: 61  VVQKSKKCLCVLIKDKDDPNLGLKINGSLALGLPNACHAPSNITECISLLHLAPNSTEAK 120

Query: 125 IFKESNPTSEPSSSPDTKVHGSSSAANEKSDGGMGKRWIGGTEMIMKILLGFFILSHL-N 184
           IFKESN TSEPSS+PD+KVHGS+S ANEKSDGG  K+ IGG  MIM+ILLGFFILSHL N
Sbjct: 121 IFKESNSTSEPSSAPDSKVHGSASTANEKSDGGTSKKPIGGAGMIMEILLGFFILSHLNN 180

Query: 185 LMFI 188
           L FI
Sbjct: 181 LKFI 184

[Close]

BLAST of Cmc02g0042181 vs. ExPASy TrEMBL
Match: A0A6J1JIZ5 (protein YLS3-like OS=Cucurbita maxima OX=3661 GN=LOC111485523 PE=3 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 5.1e-78
Identity = 158/184 (85.87%), Postives = 166/184 (90.22%), Query Frame = 0


Query: 5   LATFSFICNFLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQ 64
           +A F F    LLLLA FA SNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQ
Sbjct: 1   MALFVFCNLLLLLLAPFAVSNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQ 60

Query: 65  VVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNSTEAK 124
           VVQKSKKCLCVLIKDKDDPNLGLKINGSLAL LP+ACHAP+NITECISLLHL+PNSTEAK
Sbjct: 61  VVQKSKKCLCVLIKDKDDPNLGLKINGSLALGLPNACHAPSNITECISLLHLAPNSTEAK 120

Query: 125 IFKESNPTSEPSSSPDTKVHGSSSAANEKSDGGMGKRWIGGTEMIMKILLGFFILSHLN- 184
           IFKESN TSEPSS+PD+KVHGSSS ANEKSDGG  K+ IGG  MIM+ILLGFFILSHLN 
Sbjct: 121 IFKESNSTSEPSSAPDSKVHGSSSTANEKSDGGTRKKPIGGVGMIMEILLGFFILSHLNS 180

Query: 185 LMFI 188
           L FI
Sbjct: 181 LKFI 184

[Close]

BLAST of Cmc02g0042181 vs. TAIR 10
Match: AT1G55260.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 151.8 bits (382), Expect = 5.6e-37
Identity = 80/161 (49.69%), Postives = 112/161 (69.57%), Query Frame = 0


Query: 17  LLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQVVQKSKKCLCVL 76
           +L  F  S++ QDR EC++QLI L+ C+PYV GDAK PT DCC+G  QV++KS+KC+C+L
Sbjct: 60  MLLGFGNSDLAQDREECTNQLIELSTCIPYVGGDAKAPTKDCCAGFGQVIRKSEKCVCIL 119

Query: 77  IKDKDDPNLGLKINGSLALALPHACHAPA-NITECISLLHLSPNSTEAKIFKESNPTSEP 136
           ++DKDDP LG+KIN +LA  LP ACH  A NIT+CIS+LHL  NST AK F+      + 
Sbjct: 120 VRDKDDPQLGIKINATLAAHLPSACHITAPNITDCISILHLPRNSTLAKEFENLGRIEDN 179

Query: 137 -SSSPDTKVH-GSSSAANEKSDGGMGKRWIGGTEMIMKILL 175
            +S+  T++H G   A   KS+G   K W+ G E+++ +L+
Sbjct: 180 YNSTSPTQIHKGGGKAEPVKSNGWKEKSWL-GVELLIYLLV 219

[Close]

BLAST of Cmc02g0042181 vs. TAIR 10
Match: AT1G55260.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 150.6 bits (379), Expect = 1.3e-36
Identity = 80/164 (48.78%), Postives = 112/164 (68.29%), Query Frame = 0


Query: 17  LLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQVVQKSKKCLCVL 76
           +L  F  S++ QDR EC++QLI L+ C+PYV GDAK PT DCC+G  QV++KS+KC+C+L
Sbjct: 60  MLLGFGNSDLAQDREECTNQLIELSTCIPYVGGDAKAPTKDCCAGFGQVIRKSEKCVCIL 119

Query: 77  IKDKDDPNLGLKINGSLALALPHACHAPA-NITECISLLHLSPNSTEAKIFKESNPTSEP 136
           ++DKDDP LG+KIN +LA  LP ACH  A NIT+CIS+LHL  NST AK F+      + 
Sbjct: 120 VRDKDDPQLGIKINATLAAHLPSACHITAPNITDCISILHLPRNSTLAKEFENLGRIEDN 179

Query: 137 -SSSPDTKVH----GSSSAANEKSDGGMGKRWIGGTEMIMKILL 175
            +S+  T++H    G   A   KS+G   K W+ G E+++ +L+
Sbjct: 180 YNSTSPTQIHKDGTGGGKAEPVKSNGWKEKSWL-GVELLIYLLV 222

[Close]

BLAST of Cmc02g0042181 vs. TAIR 10
Match: AT2G44300.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 146.7 bits (369), Expect = 1.8e-35
Identity = 78/185 (42.16%), Postives = 122/185 (65.95%), Query Frame = 0


Query: 22  AASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQVVQKSKKCLCVLIKDKD 81
           AA +  +D+ EC++QL+G+A CLPYV G AK+PT DCCSGLKQV+  +KKCLCV+I+D++
Sbjct: 24  AADDKTKDKEECTEQLVGMATCLPYVQGQAKSPTPDCCSGLKQVLNSNKKCLCVIIQDRN 83

Query: 82  DPNLGLKINGSLALALPHACHAPANITECISLLHLSPNSTEAKIF-------KESNPTSE 141
           DP+LGL+IN SLALALP  CHA A++T+C +LLHL PNS +A++F        ++ P S 
Sbjct: 84  DPDLGLQINVSLALALPSVCHAAADVTKCPALLHLDPNSPDAQVFYQLAKGLNKTGPASA 143

Query: 142 PS-SSPDTKVHGSSSAANEKSDGG-------------MGKRWIGGTEMIMKILLGFFILS 186
           P+ SSP       +S +++ ++ G               K+W+G     ++++  FF++ 
Sbjct: 144 PTGSSPGPISISPTSGSDDGNNSGRTTSVPGRNHAQSFYKQWLG-----LEVVFHFFVIF 203

[Close]

BLAST of Cmc02g0042181 vs. TAIR 10
Match: AT2G44290.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 138.7 bits (348), Expect = 4.9e-33
Identity = 74/190 (38.95%), Postives = 115/190 (60.53%), Query Frame = 0


Query: 17  LLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQVVQKSKKCLCVL 76
           ++   A ++  +D+ EC+ QL+G+A CLPYV G AK+PT DCCSGLKQV+    KCLC++
Sbjct: 20  MVVDAAGADKGKDKEECTAQLVGMATCLPYVQGKAKSPTPDCCSGLKQVINSDMKCLCMI 79

Query: 77  IKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNSTEAKIFKE-------- 136
           I++++DP+LGL++N SLALALP  CHA A+IT+C +LLHL PNS +A++F +        
Sbjct: 80  IQERNDPDLGLQVNVSLALALPSVCHATADITKCPALLHLDPNSPDAQVFYQLAKGLNET 139

Query: 137 ----------SNPT---SEPSSSPDTKVHGSSSAANEKSDGGMGKRWIGGTEMIMKILLG 186
                     S PT   S P SS       ++S           K+W+G     ++++  
Sbjct: 140 VSASAPTGSASEPTSMSSTPGSSAGNNSGRTTSVPGTNHAQSFSKQWLG-----LEVVAH 199

[Close]

BLAST of Cmc02g0042181 vs. TAIR 10
Match: AT3G58550.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 110.2 bits (274), Expect = 1.9e-24
Identity = 60/156 (38.46%), Postives = 89/156 (57.05%), Query Frame = 0


Query: 11  ICNFLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQVVQK-- 70
           +C  + ++     S + QD   C D +  L  CLP+V+  AK P   CCS LK  + K  
Sbjct: 16  LCITVAVMFLGVRSELSQDIKGCQDAMSDLYSCLPFVTNKAKAPDSTCCSTLKVKIDKGQ 75

Query: 71  SKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNSTEAKIFKE 130
           ++KCLC L+KD+DDP LG K++ + A++LP ACH PANI++C  LLHL P+S  ++IFK+
Sbjct: 76  TRKCLCTLVKDRDDPGLGFKVDANRAMSLPSACHVPANISQCPDLLHLLPDSPASQIFKQ 135

Query: 131 SNPTSEPSSSPDTKVHGSSSAANEKSDGGMGKRWIG 165
              T   S +   K   +SS+   + +   G    G
Sbjct: 136 F--TESSSQTVGHKAVSTSSSIKGRDNKQFGLMMAG 169

The following BLAST results are available for this feature:

BLAST of Cmc02g0042181 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008451096.1	4.1e-98	100.00	PREDICTED: protein YLS3-like [Cucumis melo] >KAA0055642.1 protein YLS3-like [Cuc...	[more]
XP_004144111.1	1.0e-93	95.72	protein YLS3 isoform X1 [Cucumis sativus] >KGN66415.1 hypothetical protein Csa_0...	[more]
XP_038878589.1	1.7e-91	94.65	non-specific lipid transfer protein GPI-anchored 6-like [Benincasa hispida]	[more]
XP_023515387.1	3.6e-78	86.41	protein YLS3-like [Cucurbita pepo subsp. pepo]	[more]
XP_022960972.1	4.7e-78	85.87	protein YLS3-like [Cucurbita moschata] >KAG6590243.1 Protein YLS3, partial [Cucu...	[more]

BLAST of Cmc02g0042181 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4I082	1.8e-35	48.78	Non-specific lipid transfer protein GPI-anchored 6 OS=Arabidopsis thaliana OX=37...	[more]
O64865	2.5e-34	42.16	Non-specific lipid transfer protein GPI-anchored 14 OS=Arabidopsis thaliana OX=3...	[more]
O64864	6.9e-32	38.95	Non-specific lipid transfer protein GPI-anchored 13 OS=Arabidopsis thaliana OX=3...	[more]
Q9M2G1	2.6e-23	38.46	Non-specific lipid transfer protein GPI-anchored 22 OS=Arabidopsis thaliana OX=3...	[more]
Q9LJ86	5.2e-11	34.83	Non-specific lipid transfer protein GPI-anchored 5 OS=Arabidopsis thaliana OX=37...	[more]

BLAST of Cmc02g0042181 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UIG8	2.0e-98	100.00	Protein YLS3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G000...	[more]
A0A1S3BRH1	2.0e-98	100.00	protein YLS3-like OS=Cucumis melo OX=3656 GN=LOC103492476 PE=3 SV=1	[more]
A0A0A0LX07	5.1e-94	95.72	AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G602030 PE=4 SV...	[more]
A0A6J1H8W0	2.3e-78	85.87	protein YLS3-like OS=Cucurbita moschata OX=3662 GN=LOC111461612 PE=3 SV=1	[more]
A0A6J1JIZ5	5.1e-78	85.87	protein YLS3-like OS=Cucurbita maxima OX=3661 GN=LOC111485523 PE=3 SV=1	[more]

BLAST of Cmc02g0042181 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G55260.2	5.6e-37	49.69	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G55260.1	1.3e-36	48.78	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G44300.1	1.8e-35	42.16	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G44290.1	4.9e-33	38.95	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G58550.1	1.9e-24	38.46	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PRINTS	PR00382	LIPIDTRNSFER	coord: 32..48 score: 33.12 coord: 88..105 score: 27.01 coord: 53..67 score: 30.36
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 33..110 e-value: 3.2E-6 score: 36.7
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 17..110 e-value: 1.1E-13 score: 51.2
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 29..110 e-value: 3.7E-14 score: 54.4
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 31..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..158
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..153
None	No IPR available	PANTHER	PTHR33044:SF194	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN	coord: 10..174
None	No IPR available	CDD	cd00010	AAI_LTSS	coord: 40..102 e-value: 3.53311E-18 score: 72.8446
IPR043325	Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein	PANTHER	PTHR33044	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED	coord: 10..174

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc02g0042181.1	Cmc02g0042181.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0008289	lipid binding