Cmc02g0039681 (gene) Melon (Charmono) v1.1

Overview
NameCmc02g0039681
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr02: 1631413 .. 1631731 (+)
RNA-Seq ExpressionCmc02g0039681
SyntenyCmc02g0039681
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTGAATTTGTGGTTCATCCAAATCGGGATCGCTATCATCCACGACGTCGTTCAAAAGCTCACAACATTCCCATATGCTCATTTCCACTCTATCCATTTTCTTATACTCTTCTCTCATCTTCGTCACAAATTCATAAGTTTGATGAATGTGATTCTTCCTATAGAATTCCTCAACCCCCTTTTGTCTCTCACTTTCCGCTTCGTAATCTCTAAACGAATGCCCGAATGCATTCATTTCCGGTGCTGCGAATCCCTCCGTCGTCCTCGCATTTGGTACCACAAATCCCCCGTCTAACACCAATTCCTTCAACTCTGTC

mRNA sequence

ATGCTGAATTTGTGGTTCATCCAAATCGGGATCGCTATCATCCACGACGTCGTTCAAAAGCTCACAACATTCCCATATGCTCATTTCCACTCTATCCATTTTCTTATACTCTTCTCTCATCTTCGTCACAAATTCATAAGTTTGATGAATGTGATTCTTCCTATAGAATTCCTCAACCCCCTTTTGTCTCTCACTTTCCGCTTCGTAATCTCTAAACGAATGCCCGAATGCATTCATTTCCGGTGCTGCGAATCCCTCCGTCGTCCTCGCATTTGGTACCACAAATCCCCCGTCTAACACCAATTCCTTCAACTCTGTC

Coding sequence (CDS)

ATGCTGAATTTGTGGTTCATCCAAATCGGGATCGCTATCATCCACGACGTCGTTCAAAAGCTCACAACATTCCCATATGCTCATTTCCACTCTATCCATTTTCTTATACTCTTCTCTCATCTTCGTCACAAATTCATAAGTTTGATGAATGTGATTCTTCCTATAGAATTCCTCAACCCCCTTTTGTCTCTCACTTTCCGCTTCGTAATCTCTAAACGAATGCCCGAATGCATTCATTTCCGGTGCTGCGAATCCCTCCGTCGTCCTCGCATTTGGTACCACAAATCCCCCGTCTAA

Protein sequence

MLNLWFIQIGIAIIHDVVQKLTTFPYAHFHSIHFLILFSHLRHKFISLMNVILPIEFLNPLLSLTFRFVISKRMPECIHFRCCESLRRPRIWYHKSPV
Homology
[Close]
BLAST of Cmc02g0039681 vs. NCBI nr
Match: RHN39200.1 (hypothetical protein MtrunA17_Chr8g0341291 [Medicago truncatula])

HSP 1 Score: 57.4 bits (137), Expect = 8.1e-05
Identity = 25/43 (58.14%), Postives = 30/43 (69.77%), Query Frame = 0 

Query: 1  MLNLWFIQIGIAIIHDVVQKLTTFPYAHFHSIHFLILFSHLRH 44
          MLNLWFIQ+ +  IH  +QK TTFPYAH + + F I FSH  H
Sbjct: 1  MLNLWFIQVRVTFIHHFIQKFTTFPYAHLYPVQFPIFFSHFLH 43

[Close]
BLAST of Cmc02g0039681 vs. ExPASy TrEMBL
Match: A0A396GDA3 (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr8g0341291 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 3.9e-05
Identity = 25/43 (58.14%), Postives = 30/43 (69.77%), Query Frame = 0 

Query: 1  MLNLWFIQIGIAIIHDVVQKLTTFPYAHFHSIHFLILFSHLRH 44
          MLNLWFIQ+ +  IH  +QK TTFPYAH + + F I FSH  H
Sbjct: 1  MLNLWFIQVRVTFIHHFIQKFTTFPYAHLYPVQFPIFFSHFLH 43

The following BLAST results are available for this feature:
BLAST of Cmc02g0039681 vs. NCBI nr
Match NameE-valueIdentityDescription
RHN39200.18.1e-0558.14hypothetical protein MtrunA17_Chr8g0341291 [Medicago truncatula][more]
BLAST of Cmc02g0039681 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc02g0039681 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A396GDA33.9e-0558.14Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr8g0341291 ... [more]
BLAST of Cmc02g0039681 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc02g0039681.1Cmc02g0039681.1mRNA