Cmc02g0039311 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc02g0039311
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Beta-galactosidase
Location	CMiso1.1chr02: 1351485 .. 1352072 (+)
RNA-Seq Expression	Cmc02g0039311
Synteny	Cmc02g0039311

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGGCTCCCTATGAGAAACATATGGAAGCTGTTAACAGAATCCTGAGATACTTGAAAAATACACCTGGTAAAGGGTTGATGTTTAGAAAAACAAATAGAAAGACCATTGAGGCATATACTGACTCAGATTGGGCAGGATCTGTTATTGATAGAAAGTCTACATCCGGTTATTGTACCTTTGTTTGGGGCAATCTTGTAACTTGGAGGAGTAAGAAGCAAAGTGTTGTGGCCAGGAGCAGTGCTGAGGCTGAATACAGAGCTATGAGTCTGGGAATATGTGAGGAAATTTGGCTCCAGAAAGTCTTGTCAGATCTTCATCAGGAATGTGAGACACCATTGAAGCTTTTTTGTGATAATAAAGCCGCTATTAGTATTGCTAACAACCCAGTGCAACATGATAGAACTAAACATGTTGAGATTGATCGGCATTTCATCAAAGAAAGACTTGACAGTGGAAGCATATGCATTCCGTACATTCCTTCAAGCCAACAGATTGCTGATGTTCTTACCAAGGGGCTTCTCCGACCACACTTCGACCTTTGCGTTAGCAAGTTGGGACTCATTGATATTTACCTCCCAACTTGA

mRNA sequence

ATGCAGGCTCCCTATGAGAAACATATGGAAGCTGTTAACAGAATCCTGAGATACTTGAAAAATACACCTGGTAAAGGGTTGATGTTTAGAAAAACAAATAGAAAGACCATTGAGGCATATACTGACTCAGATTGGGCAGGATCTGTTATTGATAGAAAGTCTACATCCGGTTATTGTACCTTTGTTTGGGGCAATCTTGTAACTTGGAGGAGTAAGAAGCAAAGTGTTGTGGCCAGGAGCAGTGCTGAGGCTGAATACAGAGCTATGAGTCTGGGAATATGTGAGGAAATTTGGCTCCAGAAAGTCTTGTCAGATCTTCATCAGGAATGTGAGACACCATTGAAGCTTTTTTGTGATAATAAAGCCGCTATTAGTATTGCTAACAACCCAGTGCAACATGATAGAACTAAACATGTTGAGATTGATCGGCATTTCATCAAAGAAAGACTTGACAGTGGAAGCATATGCATTCCGTACATTCCTTCAAGCCAACAGATTGCTGATGTTCTTACCAAGGGGCTTCTCCGACCACACTTCGACCTTTGCGTTAGCAAGTTGGGACTCATTGATATTTACCTCCCAACTTGA

Coding sequence (CDS)

ATGCAGGCTCCCTATGAGAAACATATGGAAGCTGTTAACAGAATCCTGAGATACTTGAAAAATACACCTGGTAAAGGGTTGATGTTTAGAAAAACAAATAGAAAGACCATTGAGGCATATACTGACTCAGATTGGGCAGGATCTGTTATTGATAGAAAGTCTACATCCGGTTATTGTACCTTTGTTTGGGGCAATCTTGTAACTTGGAGGAGTAAGAAGCAAAGTGTTGTGGCCAGGAGCAGTGCTGAGGCTGAATACAGAGCTATGAGTCTGGGAATATGTGAGGAAATTTGGCTCCAGAAAGTCTTGTCAGATCTTCATCAGGAATGTGAGACACCATTGAAGCTTTTTTGTGATAATAAAGCCGCTATTAGTATTGCTAACAACCCAGTGCAACATGATAGAACTAAACATGTTGAGATTGATCGGCATTTCATCAAAGAAAGACTTGACAGTGGAAGCATATGCATTCCGTACATTCCTTCAAGCCAACAGATTGCTGATGTTCTTACCAAGGGGCTTCTCCGACCACACTTCGACCTTTGCGTTAGCAAGTTGGGACTCATTGATATTTACCTCCCAACTTGA

Protein sequence

MQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDNKAAISIANNPVQHDRTKHVEIDRHFIKERLDSGSICIPYIPSSQQIADVLTKGLLRPHFDLCVSKLGLIDIYLPT

Homology

[Close]

BLAST of Cmc02g0039311 vs. NCBI nr
Match: TYJ99952.1 (Beta-galactosidase [Cucumis melo var. makuwa] >TYK02395.1 Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 404.8 bits (1039), Expect = 4.1e-109
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0


Query: 1    MQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCT 60
            MQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCT
Sbjct: 1411 MQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCT 1470

Query: 61   FVWGNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDN 120
            FVWGNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDN
Sbjct: 1471 FVWGNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDN 1530

Query: 121  KAAISIANNPVQHDRTKHVEIDRHFIKERLDSGSICIPYIPSSQQIADVLTKGLLRPHFD 180
            KAAISIANNPVQHDRTKHVEIDRHFIKERLDSGSICIPYIPSSQQIADVLTKGLLRPHFD
Sbjct: 1531 KAAISIANNPVQHDRTKHVEIDRHFIKERLDSGSICIPYIPSSQQIADVLTKGLLRPHFD 1590

Query: 181  LCVSKLGLIDIYLPT 196
            LCVSKLGLIDIYLPT
Sbjct: 1591 LCVSKLGLIDIYLPT 1605

[Close]

BLAST of Cmc02g0039311 vs. NCBI nr
Match: TYK08054.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 404.8 bits (1039), Expect = 4.1e-109
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0


Query: 1    MQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCT 60
            MQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCT
Sbjct: 1411 MQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCT 1470

Query: 61   FVWGNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDN 120
            FVWGNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDN
Sbjct: 1471 FVWGNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDN 1530

Query: 121  KAAISIANNPVQHDRTKHVEIDRHFIKERLDSGSICIPYIPSSQQIADVLTKGLLRPHFD 180
            KAAISIANNPVQHDRTKHVEIDRHFIKERLDSGSICIPYIPSSQQIADVLTKGLLRPHFD
Sbjct: 1531 KAAISIANNPVQHDRTKHVEIDRHFIKERLDSGSICIPYIPSSQQIADVLTKGLLRPHFD 1590

Query: 181  LCVSKLGLIDIYLPT 196
            LCVSKLGLIDIYLPT
Sbjct: 1591 LCVSKLGLIDIYLPT 1605

[Close]

BLAST of Cmc02g0039311 vs. NCBI nr
Match: KAA0048203.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 404.8 bits (1039), Expect = 4.1e-109
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0


Query: 1    MQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCT 60
            MQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCT
Sbjct: 1411 MQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCT 1470

Query: 61   FVWGNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDN 120
            FVWGNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDN
Sbjct: 1471 FVWGNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDN 1530

Query: 121  KAAISIANNPVQHDRTKHVEIDRHFIKERLDSGSICIPYIPSSQQIADVLTKGLLRPHFD 180
            KAAISIANNPVQHDRTKHVEIDRHFIKERLDSGSICIPYIPSSQQIADVLTKGLLRPHFD
Sbjct: 1531 KAAISIANNPVQHDRTKHVEIDRHFIKERLDSGSICIPYIPSSQQIADVLTKGLLRPHFD 1590

Query: 181  LCVSKLGLIDIYLPT 196
            LCVSKLGLIDIYLPT
Sbjct: 1591 LCVSKLGLIDIYLPT 1605

[Close]

BLAST of Cmc02g0039311 vs. NCBI nr
Match: KAA0025363.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 404.8 bits (1039), Expect = 4.1e-109
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0


Query: 1    MQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCT 60
            MQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCT
Sbjct: 1443 MQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCT 1502

Query: 61   FVWGNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDN 120
            FVWGNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDN
Sbjct: 1503 FVWGNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDN 1562

Query: 121  KAAISIANNPVQHDRTKHVEIDRHFIKERLDSGSICIPYIPSSQQIADVLTKGLLRPHFD 180
            KAAISIANNPVQHDRTKHVEIDRHFIKERLDSGSICIPYIPSSQQIADVLTKGLLRPHFD
Sbjct: 1563 KAAISIANNPVQHDRTKHVEIDRHFIKERLDSGSICIPYIPSSQQIADVLTKGLLRPHFD 1622

Query: 181  LCVSKLGLIDIYLPT 196
            LCVSKLGLIDIYLPT
Sbjct: 1623 LCVSKLGLIDIYLPT 1637

[Close]

BLAST of Cmc02g0039311 vs. NCBI nr
Match: KAA0034386.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 404.8 bits (1039), Expect = 4.1e-109
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0


Query: 1    MQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCT 60
            MQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCT
Sbjct: 1468 MQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCT 1527

Query: 61   FVWGNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDN 120
            FVWGNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDN
Sbjct: 1528 FVWGNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDN 1587

Query: 121  KAAISIANNPVQHDRTKHVEIDRHFIKERLDSGSICIPYIPSSQQIADVLTKGLLRPHFD 180
            KAAISIANNPVQHDRTKHVEIDRHFIKERLDSGSICIPYIPSSQQIADVLTKGLLRPHFD
Sbjct: 1588 KAAISIANNPVQHDRTKHVEIDRHFIKERLDSGSICIPYIPSSQQIADVLTKGLLRPHFD 1647

Query: 181  LCVSKLGLIDIYLPT 196
            LCVSKLGLIDIYLPT
Sbjct: 1648 LCVSKLGLIDIYLPT 1662

[Close]

BLAST of Cmc02g0039311 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.0e-38
Identity = 77/188 (40.96%), Postives = 116/188 (61.70%), Query Frame = 0


Query: 1    MQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCT 60
            M  P E+H++A+ RILRYL  TP  G+  +K N  ++ AY+D+DWAG   D  ST+GY  
Sbjct: 1273 MHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIV 1332

Query: 61   FVWGNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDN 120
            ++  + ++W SKKQ  V RSS EAEYR+++    E  W+  +L++L      P  ++CDN
Sbjct: 1333 YLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYCDN 1392

Query: 121  KAAISIANNPVQHDRTKHVEIDRHFIKERLDSGSICIPYIPSSQQIADVLTKGLLRPHFD 180
              A  +  NPV H R KH+ ID HFI+ ++ SG++ + ++ +  Q+AD LTK L R  F 
Sbjct: 1393 VGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRTAFQ 1452

Query: 181  LCVSKLGL 189
               SK+G+
Sbjct: 1453 NFASKIGV 1460

[Close]

BLAST of Cmc02g0039311 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 159.1 bits (401), Expect = 5.2e-38
Identity = 81/181 (44.75%), Postives = 116/181 (64.09%), Query Frame = 0


Query: 12   VNRILRYLKNTPGKGLMFRK--TNRKTIEAYTDSDWAGSVIDRKSTSGYCTFVWG-NLVT 71
            + R+LRYLK T    L+F+K       I  Y DSDWAGS IDRKST+GY   ++  NL+ 
Sbjct: 1221 LKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLIC 1280

Query: 72   WRSKKQSVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDNKAAISIAN 131
            W +K+Q+ VA SS EAEY A+   + E +WL+ +L+ ++ + E P+K++ DN+  ISIAN
Sbjct: 1281 WNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCISIAN 1340

Query: 132  NPVQHDRTKHVEIDRHFIKERLDSGSICIPYIPSSQQIADVLTKGLLRPHFDLCVSKLGL 190
            NP  H R KH++I  HF +E++ +  IC+ YIP+  Q+AD+ TK L    F     KLGL
Sbjct: 1341 NPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQLADIFTKPLPAARFVELRDKLGL 1400

[Close]

BLAST of Cmc02g0039311 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 3.4e-37
Identity = 74/191 (38.74%), Postives = 115/191 (60.21%), Query Frame = 0


Query: 1    MQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCT 60
            M  P + H  A+ R+LRYL  TP  G+  +K N  ++ AY+D+DWAG   D  ST+GY  
Sbjct: 1256 MHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIV 1315

Query: 61   FVWGNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDN 120
            ++  + ++W SKKQ  V RSS EAEYR+++    E  W+  +L++L  +   P  ++CDN
Sbjct: 1316 YLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDN 1375

Query: 121  KAAISIANNPVQHDRTKHVEIDRHFIKERLDSGSICIPYIPSSQQIADVLTKGLLRPHFD 180
              A  +  NPV H R KH+ +D HFI+ ++ SG++ + ++ +  Q+AD LTK L R  F 
Sbjct: 1376 VGATYLCANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRVAFQ 1435

Query: 181  LCVSKLGLIDI 192
                K+G+I +
Sbjct: 1436 NFSRKIGVIKV 1446

[Close]

BLAST of Cmc02g0039311 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.0e-30
Identity = 72/190 (37.89%), Postives = 119/190 (62.63%), Query Frame = 0


Query: 1    MQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCT 60
            ++ P ++H EAV  ILRYL+ T G  L F  ++   ++ YTD+D AG + +RKS++GY  
Sbjct: 1140 LENPGKEHWEAVKWILRYLRGTTGDCLCFGGSD-PILKGYTDADMAGDIDNRKSSTGYLF 1199

Query: 61   FVWGNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEIWLQKVLSD--LHQECETPLKLFC 120
               G  ++W+SK Q  VA S+ EAEY A +    E IWL++ L +  LHQ+      ++C
Sbjct: 1200 TFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQK---EYVVYC 1259

Query: 121  DNKAAISIANNPVQHDRTKHVEIDRHFIKERLDSGSICIPYIPSSQQIADVLTKGLLRPH 180
            D+++AI ++ N + H RTKH+++  H+I+E +D  S+ +  I +++  AD+LTK + R  
Sbjct: 1260 DSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRNK 1319

Query: 181  FDLCVSKLGL 189
            F+LC   +G+
Sbjct: 1320 FELCKELVGM 1325

[Close]

BLAST of Cmc02g0039311 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 4.6e-18
Identity = 41/98 (41.84%), Postives = 62/98 (63.27%), Query Frame = 0


Query: 1   MQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCT 60
           M  P     + + R+LRY+K T   GL   K ++  ++A+ DSDWAG    R+ST+G+CT
Sbjct: 128 MHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCT 187

Query: 61  FVWGNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEIW 99
           F+  N+++W +K+Q  V+RSS E EYRA++L   E  W
Sbjct: 188 FLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of Cmc02g0039311 vs. ExPASy TrEMBL
Match: A0A5D3BJK7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G001020 PE=4 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 2.0e-109
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0


Query: 1    MQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCT 60
            MQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCT
Sbjct: 1411 MQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCT 1470

Query: 61   FVWGNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDN 120
            FVWGNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDN
Sbjct: 1471 FVWGNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDN 1530

Query: 121  KAAISIANNPVQHDRTKHVEIDRHFIKERLDSGSICIPYIPSSQQIADVLTKGLLRPHFD 180
            KAAISIANNPVQHDRTKHVEIDRHFIKERLDSGSICIPYIPSSQQIADVLTKGLLRPHFD
Sbjct: 1531 KAAISIANNPVQHDRTKHVEIDRHFIKERLDSGSICIPYIPSSQQIADVLTKGLLRPHFD 1590

Query: 181  LCVSKLGLIDIYLPT 196
            LCVSKLGLIDIYLPT
Sbjct: 1591 LCVSKLGLIDIYLPT 1605

[Close]

BLAST of Cmc02g0039311 vs. ExPASy TrEMBL
Match: A0A5D3C4T4 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00040 PE=4 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 2.0e-109
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0


Query: 1    MQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCT 60
            MQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCT
Sbjct: 1411 MQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCT 1470

Query: 61   FVWGNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDN 120
            FVWGNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDN
Sbjct: 1471 FVWGNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDN 1530

Query: 121  KAAISIANNPVQHDRTKHVEIDRHFIKERLDSGSICIPYIPSSQQIADVLTKGLLRPHFD 180
            KAAISIANNPVQHDRTKHVEIDRHFIKERLDSGSICIPYIPSSQQIADVLTKGLLRPHFD
Sbjct: 1531 KAAISIANNPVQHDRTKHVEIDRHFIKERLDSGSICIPYIPSSQQIADVLTKGLLRPHFD 1590

Query: 181  LCVSKLGLIDIYLPT 196
            LCVSKLGLIDIYLPT
Sbjct: 1591 LCVSKLGLIDIYLPT 1605

[Close]

BLAST of Cmc02g0039311 vs. ExPASy TrEMBL
Match: A0A5A7VLQ7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G00690 PE=4 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 2.0e-109
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0


Query: 1    MQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCT 60
            MQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCT
Sbjct: 1411 MQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCT 1470

Query: 61   FVWGNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDN 120
            FVWGNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDN
Sbjct: 1471 FVWGNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDN 1530

Query: 121  KAAISIANNPVQHDRTKHVEIDRHFIKERLDSGSICIPYIPSSQQIADVLTKGLLRPHFD 180
            KAAISIANNPVQHDRTKHVEIDRHFIKERLDSGSICIPYIPSSQQIADVLTKGLLRPHFD
Sbjct: 1531 KAAISIANNPVQHDRTKHVEIDRHFIKERLDSGSICIPYIPSSQQIADVLTKGLLRPHFD 1590

Query: 181  LCVSKLGLIDIYLPT 196
            LCVSKLGLIDIYLPT
Sbjct: 1591 LCVSKLGLIDIYLPT 1605

[Close]

BLAST of Cmc02g0039311 vs. ExPASy TrEMBL
Match: A0A5A7SM64 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold130G00220 PE=4 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 2.0e-109
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0


Query: 1    MQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCT 60
            MQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCT
Sbjct: 1411 MQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCT 1470

Query: 61   FVWGNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDN 120
            FVWGNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDN
Sbjct: 1471 FVWGNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDN 1530

Query: 121  KAAISIANNPVQHDRTKHVEIDRHFIKERLDSGSICIPYIPSSQQIADVLTKGLLRPHFD 180
            KAAISIANNPVQHDRTKHVEIDRHFIKERLDSGSICIPYIPSSQQIADVLTKGLLRPHFD
Sbjct: 1531 KAAISIANNPVQHDRTKHVEIDRHFIKERLDSGSICIPYIPSSQQIADVLTKGLLRPHFD 1590

Query: 181  LCVSKLGLIDIYLPT 196
            LCVSKLGLIDIYLPT
Sbjct: 1591 LCVSKLGLIDIYLPT 1605

[Close]

BLAST of Cmc02g0039311 vs. ExPASy TrEMBL
Match: A0A5D3D7S1 (Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G00430 PE=4 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 2.0e-109
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0


Query: 1   MQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCT 60
           MQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCT
Sbjct: 85  MQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCT 144

Query: 61  FVWGNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDN 120
           FVWGNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDN
Sbjct: 145 FVWGNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDN 204

Query: 121 KAAISIANNPVQHDRTKHVEIDRHFIKERLDSGSICIPYIPSSQQIADVLTKGLLRPHFD 180
           KAAISIANNPVQHDRTKHVEIDRHFIKERLDSGSICIPYIPSSQQIADVLTKGLLRPHFD
Sbjct: 205 KAAISIANNPVQHDRTKHVEIDRHFIKERLDSGSICIPYIPSSQQIADVLTKGLLRPHFD 264

Query: 181 LCVSKLGLIDIYLPT 196
           LCVSKLGLIDIYLPT
Sbjct: 265 LCVSKLGLIDIYLPT 279

[Close]

BLAST of Cmc02g0039311 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 140.2 bits (352), Expect = 1.8e-33
Identity = 66/148 (44.59%), Postives = 95/148 (64.19%), Query Frame = 0


Query: 2   QAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTF 61
           +AP   H +AV +IL Y+K T G+GL +       ++ ++D+ +      R+ST+GYC F
Sbjct: 407 EAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMF 466

Query: 62  VWGNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDNK 121
           +  +L++W+SKKQ VV++SSAEAEYRA+S    E +WL +   +L      P  LFCDN 
Sbjct: 467 LGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNT 526

Query: 122 AAISIANNPVQHDRTKHVEIDRHFIKER 150
           AAI IA N V H+RTKH+E D H ++ER
Sbjct: 527 AAIHIATNAVFHERTKHIESDCHSVRER 554

[Close]

BLAST of Cmc02g0039311 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 92.8 bits (229), Expect = 3.2e-19
Identity = 41/98 (41.84%), Postives = 62/98 (63.27%), Query Frame = 0


Query: 1   MQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCT 60
           M  P     + + R+LRY+K T   GL   K ++  ++A+ DSDWAG    R+ST+G+CT
Sbjct: 128 MHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCT 187

Query: 61  FVWGNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEIW 99
           F+  N+++W +K+Q  V+RSS E EYRA++L   E  W
Sbjct: 188 FLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of Cmc02g0039311 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 53.1 bits (126), Expect = 2.8e-07
Identity = 22/54 (40.74%), Postives = 36/54 (66.67%), Query Frame = 0


Query: 9  MEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 63
          M+AV ++L Y+K T G+GL +  T+   ++A+ DSDWA     R+S +G+C+ V
Sbjct: 29 MQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFADSDWASCPDTRRSVTGFCSLV 82

The following BLAST results are available for this feature:

BLAST of Cmc02g0039311 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ99952.1	4.1e-109	100.00	Beta-galactosidase [Cucumis melo var. makuwa] >TYK02395.1 Beta-galactosidase [Cu...	[more]
TYK08054.1	4.1e-109	100.00	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
KAA0048203.1	4.1e-109	100.00	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
KAA0025363.1	4.1e-109	100.00	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
KAA0034386.1	4.1e-109	100.00	Beta-galactosidase [Cucumis melo var. makuwa]	[more]

BLAST of Cmc02g0039311 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	1.0e-38	40.96	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P04146	5.2e-38	44.75	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q9ZT94	3.4e-37	38.74	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P10978	3.0e-30	37.89	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P92519	4.6e-18	41.84	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Cmc02g0039311 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BJK7	2.0e-109	100.00	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G0...	[more]
A0A5D3C4T4	2.0e-109	100.00	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00...	[more]
A0A5A7VLQ7	2.0e-109	100.00	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G0...	[more]
A0A5A7SM64	2.0e-109	100.00	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold130G0...	[more]
A0A5D3D7S1	2.0e-109	100.00	Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Cucumis melo var. makuwa O...	[more]

BLAST of Cmc02g0039311 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	1.8e-33	44.59	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	3.2e-19	41.84	DNA/RNA polymerases superfamily protein	[more]
ATMG00240.1	2.8e-07	40.74	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11439:SF343	SUBFAMILY NOT NAMED	coord: 66..187
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 66..187
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 38..174 e-value: 3.67562E-79 score: 230.433
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 6..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc02g0039311.1	Cmc02g0039311.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0016310	phosphorylation
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0003676	nucleic acid binding