Cmc02g0039261 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc02g0039261
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Ty3/gypsy retrotransposon protein
Location	CMiso1.1chr02: 1335850 .. 1338012 (-)
RNA-Seq Expression	Cmc02g0039261
Synteny	Cmc02g0039261

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTAATTGGCCTCAGCCCACTAGTGTATCGGAACTAAGAGGGTTCCTTGGGTTGACGGGATACTACCGGAGGTTCGTCAAAAATTATGGAAACATTGCTGCGCCGCTGACCAAATTACTACAGAAGAATGGGTTCCATTGGGGTGAAGACGCTACAGCAGCCTTTGATTCGTTAAAACAAGCGATGATATCAGTACCGGTTCTGGCCCTTCCAGATTTCTCGTTACCATTCATCATTGAAACTGATGCTTCAGGGACAGGTTTGGGGGCTGTTCTTTCTCAAAACCACAGACCGATAGCCTATTTTAGTCAGAAATTATCTCCTCGAGCCCAAGCAAAATCCATTTATGAGAGGGAGTTAATGGCGGTAGTGATGGCTGTACAGAAATGGCGCCATTACGTGCTTGGCAGAAAATTCACGATTATTTCAGATCAGAAGGCATTGAAATTTTTATTGGAGCAGAGGGAGGTGCAACCACAATTCCAAAAATGGTTAACAAAATTGTTGGGATATGATTTTGAAATTCTGTATCAACCCGGTTTACAAAATAAAGCGGCTGATGCCCTATCCCGAGTGAAGCTACCGGCCGAATTCCACTCTTTAATGGCTCACGGGCTGTTAGACATTGACATCGTAACAAGGGAAGTGGAAAAAGATGAGGAGTTGCAAGGTATCATTGAAATCTTGAAGGAAGACCCGGATGGCAAAGCCAACTACCAGTGGAAAGCGGGAAATTTATTTTACAAAGGAAGGTTAGTTTTATCCAGAAAATCCACCCTTATTCCATCACTACTACACACCTTCCATGACTCGGTATTAGGAGGTCATTCGGGATTTCTCCGAACATACAAGAGGATGAATGGAGAGATACACTGGATGGGCATGAAAAACGACGTTAAGAAGTACGTAGAGCAATGTGAAATCTGTCAAAGGAATAAAACCGAAGCGCTAACTCCAGCGGGATTGTTGCAGCCACTGCCGATACCCAATCTGATTCTTGAAGACTGGACGATGGATTTCATCGAGGGTTTACCTAAGGCTGGAGGTTATGACAGTATCATGGTTGTAGTGGACCGGTTGAGTAAGATGGCCCATTTCATTATCTTGAAACACCCTTTTTCAGCTAAACAAGTGGCAGAAAAATTTGTTGAGGAGATCATTAGTAAACACGGTATACCGAATTCAATAGTAACTGATCGGGATAAGGTTTTTTTAAGTCATTTTTGGAAAGAACTGTTTACTGCCATGGGGACATCTTTGAAAAGAAGTACGGCTTTCCACCCGCAGACCGACGGACAAACGGAAAGGGTAAACCGCTGTTTGGAGACCTACTTACGGTGCTTTTGTAACGAGCAACCCACGAAATGGCATAGATGTATCCCGTGGGCAGAGTTGTGGTATAATACCACTTTTCACGCATCGGCCAAAACAACACCATTCCAGATAGTATATGGCCGACCACCACCACCGCTGGTACGTTATGGAGACATAAAATCTAACAACAACAGTGTGGAACAGCTGCTGAAGGAGAGGGATCTGGTTATCAGCGCTTTGAAGGAAAATCTGATGATGGCACAAAATAGAATGAAAAAACAAGCGGATTTACACCGTAGAGAACTGAAATTCAAGGTAGGAGATGAGGTTTATCTGAAGTTGCGACCTTATAGGCAGCGATCATTGGCAAGAAAACGTTGTGAGAAATTAGCCCCAAAGTTCTATGGACCTTACCGGATTGTTGAGGAGATTGGGGAAGTAGCTTATCGTCTAAACCTCCCACCCGAGGCCATCATACACAATGTATTTCACGTATCGCAACTTAAATTGAAAATGGGAAATTCACACCAAGTGCAGCATATGCCACCCGCGTTGACCGAAGAATTTGAGTTACAAGTTGAACCTGAAGCAGTTTTGGGAATCCGTTGGAATACAGATATTGGAGCTAACGAATGGTTAATTAAGTGGAAGGGGTTATCGGACAGTGAAGCGACTTGGGAACCCGTTGGGGCAATGAACCAACAATACCCTTCTTTTCACCTTGAGGACAAGGTGAACTTTGAACCCACCGGTATTGTAAGACCCCCTATCATAAATACGTATAGACGTAGAGGAAGGAAATCCAATATCCATATCGACAGCCCGGCCCAAGACAAGAATGAATAA

mRNA sequence

ATGGTTAATTGGCCTCAGCCCACTAGTGTATCGGAACTAAGAGGGTTCCTTGGGTTGACGGGATACTACCGGAGGTTCGTCAAAAATTATGGAAACATTGCTGCGCCGCTGACCAAATTACTACAGAAGAATGGGTTCCATTGGGGTGAAGACGCTACAGCAGCCTTTGATTCGTTAAAACAAGCGATGATATCAGTACCGGTTCTGGCCCTTCCAGATTTCTCGTTACCATTCATCATTGAAACTGATGCTTCAGGGACAGGTTTGGGGGCTGTTCTTTCTCAAAACCACAGACCGATAGCCTATTTTAGTCAGAAATTATCTCCTCGAGCCCAAGCAAAATCCATTTATGAGAGGGAGTTAATGGCGGTAGTGATGGCTGTACAGAAATGGCGCCATTACGTGCTTGGCAGAAAATTCACGATTATTTCAGATCAGAAGGCATTGAAATTTTTATTGGAGCAGAGGGAGGTGCAACCACAATTCCAAAAATGGTTAACAAAATTGTTGGGATATGATTTTGAAATTCTGTATCAACCCGGTTTACAAAATAAAGCGGCTGATGCCCTATCCCGAGTGAAGCTACCGGCCGAATTCCACTCTTTAATGGCTCACGGGCTGTTAGACATTGACATCGTAACAAGGGAAGTGGAAAAAGATGAGGAGTTGCAAGGTATCATTGAAATCTTGAAGGAAGACCCGGATGGCAAAGCCAACTACCAGTGGAAAGCGGGAAATTTATTTTACAAAGGAAGGTTAGTTTTATCCAGAAAATCCACCCTTATTCCATCACTACTACACACCTTCCATGACTCGGTATTAGGAGGTCATTCGGGATTTCTCCGAACATACAAGAGGATGAATGGAGAGATACACTGGATGGGCATGAAAAACGACGTTAAGAAGTACGTAGAGCAATGTGAAATCTGTCAAAGGAATAAAACCGAAGCGCTAACTCCAGCGGGATTGTTGCAGCCACTGCCGATACCCAATCTGATTCTTGAAGACTGGACGATGGATTTCATCGAGGGTTTACCTAAGGCTGGAGGTTATGACAGTATCATGGTTGTAGTGGACCGGTTGAGTAAGATGGCCCATTTCATTATCTTGAAACACCCTTTTTCAGCTAAACAAGTGGCAGAAAAATTTGTTGAGGAGATCATTAGTAAACACGGTATACCGAATTCAATAGTAACTGATCGGGATAAGGTTTTTTTAAGTCATTTTTGGAAAGAACTGTTTACTGCCATGGGGACATCTTTGAAAAGAAGTACGGCTTTCCACCCGCAGACCGACGGACAAACGGAAAGGGTAAACCGCTGTTTGGAGACCTACTTACGGTGCTTTTGTAACGAGCAACCCACGAAATGGCATAGATGTATCCCGTGGGCAGAGTTGTGGTATAATACCACTTTTCACGCATCGGCCAAAACAACACCATTCCAGATAGTATATGGCCGACCACCACCACCGCTGGTACGTTATGGAGACATAAAATCTAACAACAACAGTGTGGAACAGCTGCTGAAGGAGAGGGATCTGGTTATCAGCGCTTTGAAGGAAAATCTGATGATGGCACAAAATAGAATGAAAAAACAAGCGGATTTACACCGTAGAGAACTGAAATTCAAGGTAGGAGATGAGGTTTATCTGAAGTTGCGACCTTATAGGCAGCGATCATTGGCAAGAAAACGTTGTGAGAAATTAGCCCCAAAGTTCTATGGACCTTACCGGATTGTTGAGGAGATTGGGGAAGTAGCTTATCGTCTAAACCTCCCACCCGAGGCCATCATACACAATGTATTTCACGTATCGCAACTTAAATTGAAAATGGGAAATTCACACCAAGTGCAGCATATGCCACCCGCGTTGACCGAAGAATTTGAGTTACAAGTTGAACCTGAAGCAGTTTTGGGAATCCGTTGGAATACAGATATTGGAGCTAACGAATGGTTAATTAAGTGGAAGGGGTTATCGGACAGTGAAGCGACTTGGGAACCCGTTGGGGCAATGAACCAACAATACCCTTCTTTTCACCTTGAGGACAAGGTGAACTTTGAACCCACCGGTATTGTAAGACCCCCTATCATAAATACGTATAGACGTAGAGGAAGGAAATCCAATATCCATATCGACAGCCCGGCCCAAGACAAGAATGAATAA

Coding sequence (CDS)

ATGGTTAATTGGCCTCAGCCCACTAGTGTATCGGAACTAAGAGGGTTCCTTGGGTTGACGGGATACTACCGGAGGTTCGTCAAAAATTATGGAAACATTGCTGCGCCGCTGACCAAATTACTACAGAAGAATGGGTTCCATTGGGGTGAAGACGCTACAGCAGCCTTTGATTCGTTAAAACAAGCGATGATATCAGTACCGGTTCTGGCCCTTCCAGATTTCTCGTTACCATTCATCATTGAAACTGATGCTTCAGGGACAGGTTTGGGGGCTGTTCTTTCTCAAAACCACAGACCGATAGCCTATTTTAGTCAGAAATTATCTCCTCGAGCCCAAGCAAAATCCATTTATGAGAGGGAGTTAATGGCGGTAGTGATGGCTGTACAGAAATGGCGCCATTACGTGCTTGGCAGAAAATTCACGATTATTTCAGATCAGAAGGCATTGAAATTTTTATTGGAGCAGAGGGAGGTGCAACCACAATTCCAAAAATGGTTAACAAAATTGTTGGGATATGATTTTGAAATTCTGTATCAACCCGGTTTACAAAATAAAGCGGCTGATGCCCTATCCCGAGTGAAGCTACCGGCCGAATTCCACTCTTTAATGGCTCACGGGCTGTTAGACATTGACATCGTAACAAGGGAAGTGGAAAAAGATGAGGAGTTGCAAGGTATCATTGAAATCTTGAAGGAAGACCCGGATGGCAAAGCCAACTACCAGTGGAAAGCGGGAAATTTATTTTACAAAGGAAGGTTAGTTTTATCCAGAAAATCCACCCTTATTCCATCACTACTACACACCTTCCATGACTCGGTATTAGGAGGTCATTCGGGATTTCTCCGAACATACAAGAGGATGAATGGAGAGATACACTGGATGGGCATGAAAAACGACGTTAAGAAGTACGTAGAGCAATGTGAAATCTGTCAAAGGAATAAAACCGAAGCGCTAACTCCAGCGGGATTGTTGCAGCCACTGCCGATACCCAATCTGATTCTTGAAGACTGGACGATGGATTTCATCGAGGGTTTACCTAAGGCTGGAGGTTATGACAGTATCATGGTTGTAGTGGACCGGTTGAGTAAGATGGCCCATTTCATTATCTTGAAACACCCTTTTTCAGCTAAACAAGTGGCAGAAAAATTTGTTGAGGAGATCATTAGTAAACACGGTATACCGAATTCAATAGTAACTGATCGGGATAAGGTTTTTTTAAGTCATTTTTGGAAAGAACTGTTTACTGCCATGGGGACATCTTTGAAAAGAAGTACGGCTTTCCACCCGCAGACCGACGGACAAACGGAAAGGGTAAACCGCTGTTTGGAGACCTACTTACGGTGCTTTTGTAACGAGCAACCCACGAAATGGCATAGATGTATCCCGTGGGCAGAGTTGTGGTATAATACCACTTTTCACGCATCGGCCAAAACAACACCATTCCAGATAGTATATGGCCGACCACCACCACCGCTGGTACGTTATGGAGACATAAAATCTAACAACAACAGTGTGGAACAGCTGCTGAAGGAGAGGGATCTGGTTATCAGCGCTTTGAAGGAAAATCTGATGATGGCACAAAATAGAATGAAAAAACAAGCGGATTTACACCGTAGAGAACTGAAATTCAAGGTAGGAGATGAGGTTTATCTGAAGTTGCGACCTTATAGGCAGCGATCATTGGCAAGAAAACGTTGTGAGAAATTAGCCCCAAAGTTCTATGGACCTTACCGGATTGTTGAGGAGATTGGGGAAGTAGCTTATCGTCTAAACCTCCCACCCGAGGCCATCATACACAATGTATTTCACGTATCGCAACTTAAATTGAAAATGGGAAATTCACACCAAGTGCAGCATATGCCACCCGCGTTGACCGAAGAATTTGAGTTACAAGTTGAACCTGAAGCAGTTTTGGGAATCCGTTGGAATACAGATATTGGAGCTAACGAATGGTTAATTAAGTGGAAGGGGTTATCGGACAGTGAAGCGACTTGGGAACCCGTTGGGGCAATGAACCAACAATACCCTTCTTTTCACCTTGAGGACAAGGTGAACTTTGAACCCACCGGTATTGTAAGACCCCCTATCATAAATACGTATAGACGTAGAGGAAGGAAATCCAATATCCATATCGACAGCCCGGCCCAAGACAAGAATGAATAA

Protein sequence

MVNWPQPTSVSELRGFLGLTGYYRRFVKNYGNIAAPLTKLLQKNGFHWGEDATAAFDSLKQAMISVPVLALPDFSLPFIIETDASGTGLGAVLSQNHRPIAYFSQKLSPRAQAKSIYERELMAVVMAVQKWRHYVLGRKFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPGLQNKAADALSRVKLPAEFHSLMAHGLLDIDIVTREVEKDEELQGIIEILKEDPDGKANYQWKAGNLFYKGRLVLSRKSTLIPSLLHTFHDSVLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQRNKTEALTPAGLLQPLPIPNLILEDWTMDFIEGLPKAGGYDSIMVVVDRLSKMAHFIILKHPFSAKQVAEKFVEEIISKHGIPNSIVTDRDKVFLSHFWKELFTAMGTSLKRSTAFHPQTDGQTERVNRCLETYLRCFCNEQPTKWHRCIPWAELWYNTTFHASAKTTPFQIVYGRPPPPLVRYGDIKSNNNSVEQLLKERDLVISALKENLMMAQNRMKKQADLHRRELKFKVGDEVYLKLRPYRQRSLARKRCEKLAPKFYGPYRIVEEIGEVAYRLNLPPEAIIHNVFHVSQLKLKMGNSHQVQHMPPALTEEFELQVEPEAVLGIRWNTDIGANEWLIKWKGLSDSEATWEPVGAMNQQYPSFHLEDKVNFEPTGIVRPPIINTYRRRGRKSNIHIDSPAQDKNE

Homology

[Close]

BLAST of Cmc02g0039261 vs. NCBI nr
Match: TYJ98047.1 (Transposon Tf2-6 polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 1359.7 bits (3518), Expect = 0.0e+00
Identity = 659/683 (96.49%), Postives = 672/683 (98.39%), Query Frame = 0


Query: 1   MVNWPQPTSVSELRGFLGLTGYYRRFVKNYGNIAAPLTKLLQKNGFHWGEDATAAFDSLK 60
           MVNWPQPT+VSELRGFLGLTGYYRRFVKNYGNIAAPLTKLLQKNGFHWGEDATAAF+SLK
Sbjct: 1   MVNWPQPTNVSELRGFLGLTGYYRRFVKNYGNIAAPLTKLLQKNGFHWGEDATAAFESLK 60

Query: 61  QAMISVPVLALPDFSLPFIIETDASGTGLGAVLSQNHRPIAYFSQKLSPRAQAKSIYERE 120
           QAMISVPVLALPDFSLPFIIETDASGTGLGAVLSQN+RPIAYFSQKLSP  QAKSIYERE
Sbjct: 61  QAMISVPVLALPDFSLPFIIETDASGTGLGAVLSQNNRPIAYFSQKLSPPTQAKSIYERE 120

Query: 121 LMAVVMAVQKWRHYVLGRKFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQP 180
           LMAVVMAVQKWRHYVL  KFTIISDQKALKFLLEQREVQPQFQ+WLTKLLGYDFEILYQP
Sbjct: 121 LMAVVMAVQKWRHYVLDFKFTIISDQKALKFLLEQREVQPQFQRWLTKLLGYDFEILYQP 180

Query: 181 GLQNKAADALSRVKLPAEFHSLMAHGLLDIDIVTREVEKDEELQGIIEILKEDPDGKANY 240
           GLQNKAADALSRVKLPAEFHSL AHGLLDIDIVT EVEKDEELQGIIEILKEDP+GKANY
Sbjct: 181 GLQNKAADALSRVKLPAEFHSLRAHGLLDIDIVTTEVEKDEELQGIIEILKEDPEGKANY 240

Query: 241 QWKAGNLFYKGRLVLSRKSTLIPSLLHTFHDSVLGGHSGFLRTYKRMNGEIHWMGMKNDV 300
           QWKAGNLFYKGRLVLSRKSTLIPSLLHTFHDSVLGGH GFLRTYKRMNGEIHWMGMKNDV
Sbjct: 241 QWKAGNLFYKGRLVLSRKSTLIPSLLHTFHDSVLGGHLGFLRTYKRMNGEIHWMGMKNDV 300

Query: 301 KKYVEQCEICQRNKTEALTPAGLLQPLPIPNLILEDWTMDFIEGLPKAGGYDSIMVVVDR 360
           KKYVEQCE+CQRNKTEAL PAGLLQPLP+PNLILEDWTMDFI+GLPKAGGYD+IMVVVDR
Sbjct: 301 KKYVEQCEVCQRNKTEALAPAGLLQPLPLPNLILEDWTMDFIDGLPKAGGYDNIMVVVDR 360

Query: 361 LSKMAHFIILKHPFSAKQVAEKFVEEIISKHGIPNSIVTDRDKVFLSHFWKELFTAMGTS 420
           LSKMAHFIILKHPFSAKQVAEKFVEEIISKHGI NSIVTDRDKVFLSHFWKELFTAMGTS
Sbjct: 361 LSKMAHFIILKHPFSAKQVAEKFVEEIISKHGISNSIVTDRDKVFLSHFWKELFTAMGTS 420

Query: 421 LKRSTAFHPQTDGQTERVNRCLETYLRCFCNEQPTKWHRCIPWAELWYNTTFHASAKTTP 480
           LKRSTAFHPQTDGQTERVNRCLETYLRCFCNEQPTKWH+CIPWAELWYNTTFHA AKTTP
Sbjct: 421 LKRSTAFHPQTDGQTERVNRCLETYLRCFCNEQPTKWHKCIPWAELWYNTTFHALAKTTP 480

Query: 481 FQIVYGRPPPPLVRYGDIKSNNNSVEQLLKERDLVISALKENLMMAQNRMKKQADLHRRE 540
           FQ+VYGRPPPPLVRYGDIKSNNNSVEQLLKERDLVISALKENLMMAQNRMKKQADLHRRE
Sbjct: 481 FQVVYGRPPPPLVRYGDIKSNNNSVEQLLKERDLVISALKENLMMAQNRMKKQADLHRRE 540

Query: 541 LKFKVGDEVYLKLRPYRQRSLARKRCEKLAPKFYGPYRIVEEIGEVAYRLNLPPEAIIHN 600
           LKFKVGDEVYLKLRPYRQRSLARKRCEKLAPKFYGPYRIVEEIGEVAYRLNLPPEAIIHN
Sbjct: 541 LKFKVGDEVYLKLRPYRQRSLARKRCEKLAPKFYGPYRIVEEIGEVAYRLNLPPEAIIHN 600

Query: 601 VFHVSQLKLKMGNSHQVQHMPPALTEEFELQVEPEAVLGIRWNTDIGANEWLIKWKGLSD 660
           VFHVSQLKLK+GNSHQVQH+PPALTEEFELQVEPEAVLGIRWNTDIGANEWLIKWKGLS 
Sbjct: 601 VFHVSQLKLKLGNSHQVQHVPPALTEEFELQVEPEAVLGIRWNTDIGANEWLIKWKGLSG 660

Query: 661 SEATWEPVGAMNQQYPSFHLEDK 684
           SEATWEPVGAMNQQYPSFHLEDK
Sbjct: 661 SEATWEPVGAMNQQYPSFHLEDK 683

[Close]

BLAST of Cmc02g0039261 vs. NCBI nr
Match: KAA0066550.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 1330.5 bits (3442), Expect = 0.0e+00
Identity = 647/669 (96.71%), Postives = 658/669 (98.36%), Query Frame = 0


Query: 15   GFLGLTGYYRRFVKNYGNIAAPLTKLLQKNGFHWGEDATAAFDSLKQAMISVPVLALPDF 74
            GFLGLTGYYRRFVKNYGNIAAPLTKLLQKNGFHWGEDATAAF+SLKQAMISVPVLALPDF
Sbjct: 692  GFLGLTGYYRRFVKNYGNIAAPLTKLLQKNGFHWGEDATAAFESLKQAMISVPVLALPDF 751

Query: 75   SLPFIIETDASGTGLGAVLSQNHRPIAYFSQKLSPRAQAKSIYERELMAVVMAVQKWRHY 134
            SLPFIIETDASGTGLGAVLSQN+RPIAYFSQKLSP  QAKSIYERELMAVVMAVQKWR Y
Sbjct: 752  SLPFIIETDASGTGLGAVLSQNNRPIAYFSQKLSPPTQAKSIYERELMAVVMAVQKWRRY 811

Query: 135  VLGRKFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPGLQNKAADALSRVK 194
            VL  KFTIISDQKALKFLLEQREVQPQFQ+WLTKLLGYDFEILYQPGLQNKAADALSRVK
Sbjct: 812  VLDFKFTIISDQKALKFLLEQREVQPQFQRWLTKLLGYDFEILYQPGLQNKAADALSRVK 871

Query: 195  LPAEFHSLMAHGLLDIDIVTREVEKDEELQGIIEILKEDPDGKANYQWKAGNLFYKGRLV 254
            LPAEFHSL AHGLLDIDIVT EVEKDEELQGIIEILKEDP+GKANYQWKAGNLFYKGRLV
Sbjct: 872  LPAEFHSLRAHGLLDIDIVTTEVEKDEELQGIIEILKEDPEGKANYQWKAGNLFYKGRLV 931

Query: 255  LSRKSTLIPSLLHTFHDSVLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQRNK 314
            LSRKSTLIPSLLHTFHDSVLGGH GFLRTYKRMNGEIHWMGMKNDVKKYVEQCE+CQRNK
Sbjct: 932  LSRKSTLIPSLLHTFHDSVLGGHLGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEVCQRNK 991

Query: 315  TEALTPAGLLQPLPIPNLILEDWTMDFIEGLPKAGGYDSIMVVVDRLSKMAHFIILKHPF 374
            TEAL PAGLLQPLP+PNLILEDWTMDFIEGLPKAGGYDSIMVVVDRLSKMAHFIILKHPF
Sbjct: 992  TEALAPAGLLQPLPLPNLILEDWTMDFIEGLPKAGGYDSIMVVVDRLSKMAHFIILKHPF 1051

Query: 375  SAKQVAEKFVEEIISKHGIPNSIVTDRDKVFLSHFWKELFTAMGTSLKRSTAFHPQTDGQ 434
            SAKQVAEKFVEEIISKHGI NSIVTDRDKVFLSHFWKELFTAMGTSLKRSTAFHPQTDGQ
Sbjct: 1052 SAKQVAEKFVEEIISKHGISNSIVTDRDKVFLSHFWKELFTAMGTSLKRSTAFHPQTDGQ 1111

Query: 435  TERVNRCLETYLRCFCNEQPTKWHRCIPWAELWYNTTFHASAKTTPFQIVYGRPPPPLVR 494
            TERVNRCLETYLRCFCNEQPTKWH+CIPWAELWYNTTFHASAKTTPFQ+VYGRPPPPLVR
Sbjct: 1112 TERVNRCLETYLRCFCNEQPTKWHKCIPWAELWYNTTFHASAKTTPFQVVYGRPPPPLVR 1171

Query: 495  YGDIKSNNNSVEQLLKERDLVISALKENLMMAQNRMKKQADLHRRELKFKVGDEVYLKLR 554
            YGDIKSNNNSVEQLLKERDLVISALKENLMMAQNRMKKQADLHR+ELKFKVGDEVYLKLR
Sbjct: 1172 YGDIKSNNNSVEQLLKERDLVISALKENLMMAQNRMKKQADLHRKELKFKVGDEVYLKLR 1231

Query: 555  PYRQRSLARKRCEKLAPKFYGPYRIVEEIGEVAYRLNLPPEAIIHNVFHVSQLKLKMGNS 614
            PYRQRSLARKRCEKLAPKFYGPYRIVEEIGEVAYRLNLPPEAIIHNVFHVSQLKLK+GNS
Sbjct: 1232 PYRQRSLARKRCEKLAPKFYGPYRIVEEIGEVAYRLNLPPEAIIHNVFHVSQLKLKLGNS 1291

Query: 615  HQVQHMPPALTEEFELQVEPEAVLGIRWNTDIGANEWLIKWKGLSDSEATWEPVGAMNQQ 674
            HQVQH+PPALTEEFELQVEPEAVLGIRWNTDIGANEWLIKWKGLS SEATWEPVGAMNQQ
Sbjct: 1292 HQVQHVPPALTEEFELQVEPEAVLGIRWNTDIGANEWLIKWKGLSGSEATWEPVGAMNQQ 1351

Query: 675  YPSFHLEDK 684
            YPSFHLEDK
Sbjct: 1352 YPSFHLEDK 1360

[Close]

BLAST of Cmc02g0039261 vs. NCBI nr
Match: KAA0054183.1 (Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa] >TYK15080.1 Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 1145.2 bits (2961), Expect = 0.0e+00
Identity = 575/689 (83.45%), Postives = 596/689 (86.50%), Query Frame = 0


Query: 1   MVNWPQPTSVSELRGFLGLTGYYRRFVKNYGNIAAPLTKLLQKNGFHWGEDATAAFDSLK 60
           MVNWPQPT+VSELRGFLGLTGYYRRFVKNYGNIAAPLTKLLQKNGFHWG+DAT  F+SLK
Sbjct: 140 MVNWPQPTNVSELRGFLGLTGYYRRFVKNYGNIAAPLTKLLQKNGFHWGDDATTTFESLK 199

Query: 61  QAMISVPVLALPDFSLPFIIETDASGTGLGAVLSQNHRPIAYFSQKLSPRAQAKSIYERE 120
           QAMISVPVLALPDFSLPFIIETDASGTGLGAVLSQN+RPIAYFSQKLSPRAQAKSIYERE
Sbjct: 200 QAMISVPVLALPDFSLPFIIETDASGTGLGAVLSQNNRPIAYFSQKLSPRAQAKSIYERE 259

Query: 121 LMAVVMAVQKWRHYVLGRKFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQP 180
           LMAVVMA+QK                          EVQPQFQ+WLTKLL YDFEILYQP
Sbjct: 260 LMAVVMAIQK--------------------------EVQPQFQRWLTKLLEYDFEILYQP 319

Query: 181 GLQNKAADALSRVKLPAEFHSLMAHGLLDIDIVTREVEKDEELQGIIEILKEDPDGKANY 240
           GLQNKAADALSRVKLPAE  SL AHGL DI+IVT EVEKDEELQGII ILKE+P+GKANY
Sbjct: 320 GLQNKAADALSRVKLPAELSSLRAHGLFDIEIVTAEVEKDEELQGIINILKENPEGKANY 379

Query: 241 QWKAGNLFYKGRLVLSRKSTLIPSLLHTFHDSVLGGHSGFLRTYKRMNGEIHWMGMKNDV 300
           QWK+GNL YKGRLVLSR STLIPSLLHTFHDSVLGGHSGFLRTYKRMN EIHWMGMKNDV
Sbjct: 380 QWKSGNLLYKGRLVLSRNSTLIPSLLHTFHDSVLGGHSGFLRTYKRMNREIHWMGMKNDV 439

Query: 301 KKYVEQCEICQRNKTEALTPAGLLQPLPIPNLILEDWTMDFIEGLPKAGGYDSIMVVVDR 360
           KKYVEQCEICQRNKTEAL PAGLLQPLP+PNLIL                  SIMVVVDR
Sbjct: 440 KKYVEQCEICQRNKTEALAPAGLLQPLPLPNLILA----------------ASIMVVVDR 499

Query: 361 LSKMAHFIILKHPFSAKQVAEKFVEEIISKHGIPNSIVTDRDKVFLSHFWKELFTAMGTS 420
            SKMAHFI LKHPF+AKQVAEK VEEIISKHGIPNSIV DRDK+FLS+ WKELFTAMGTS
Sbjct: 500 SSKMAHFITLKHPFTAKQVAEKIVEEIISKHGIPNSIVIDRDKIFLSYLWKELFTAMGTS 559

Query: 421 LKRSTAFHPQTDGQTERVNRCLETYLRCFCNEQPTKWHRCIPWAELWYNTTFHASAKTTP 480
           LKRSTAFHPQTDGQTERV+RCLETYLR FCNEQPTKWH+CIPWAELWYNTTFHAS KTTP
Sbjct: 560 LKRSTAFHPQTDGQTERVDRCLETYLRSFCNEQPTKWHKCIPWAELWYNTTFHASTKTTP 619

Query: 481 FQIVYGRPPPPLVRYGDIKSNNNSVEQLLKERDLVISALKENLMMAQNRMKKQADLHRRE 540
           F                         QLLKERDLVISALKENLMMAQNRMKKQADLHRRE
Sbjct: 620 F-------------------------QLLKERDLVISALKENLMMAQNRMKKQADLHRRE 679

Query: 541 LKFKVGDEVYLKLRPYRQRSLARKRCEKLAPKFYGPYRIVEEIGEVAYRLNLPPEAIIHN 600
           LKF+VGDEVYLKLRPYRQRSLARKRCEKLAPKFYGPYRI+EEIGEVAYRLNLPP AIIHN
Sbjct: 680 LKFRVGDEVYLKLRPYRQRSLARKRCEKLAPKFYGPYRIIEEIGEVAYRLNLPPGAIIHN 739

Query: 601 VFHVSQLKLKMGNSHQVQHMPPALTEEFELQVEPEAVLGIRWNTDIGANEWLIKWKGLSD 660
           VFHVSQLKLK+GNSHQVQH+PPALTEEFELQVEPEAVLGIRWNT+IGANEWLIKWKGL D
Sbjct: 740 VFHVSQLKLKLGNSHQVQHVPPALTEEFELQVEPEAVLGIRWNTEIGANEWLIKWKGLPD 761

Query: 661 SEATWEPVGAMNQQYPSFHLEDKVNFEPT 690
           SEATWE V AMNQQYPSFHLEDKVNFEPT
Sbjct: 800 SEATWESVYAMNQQYPSFHLEDKVNFEPT 761

[Close]

BLAST of Cmc02g0039261 vs. NCBI nr
Match: TYK21035.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK30523.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 1139.8 bits (2947), Expect = 0.0e+00
Identity = 545/719 (75.80%), Postives = 624/719 (86.79%), Query Frame = 0


Query: 1    MVNWPQPTSVSELRGFLGLTGYYRRFVKNYGNIAAPLTKLLQKNGFHWGEDATAAFDSLK 60
            M+ WP+P  V+ LRGFLGLTGYYRRFVK YG IAAPLTKLLQKN F W E+AT AF+SLK
Sbjct: 813  MLQWPKPKDVTGLRGFLGLTGYYRRFVKGYGEIAAPLTKLLQKNAFKWDENATLAFESLK 872

Query: 61   QAMISVPVLALPDFSLPFIIETDASGTGLGAVLSQNHRPIAYFSQKLSPRAQAKSIYERE 120
             AM ++PVLALPD+SLPF+IETDASG+GLGAVLSQN  PIA+FSQKLS RAQAKSIYERE
Sbjct: 873  SAMSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNSHPIAFFSQKLSTRAQAKSIYERE 932

Query: 121  LMAVVMAVQKWRHYVLGRKFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQP 180
            LMAVV++VQKWRHY+LGR+FTI+SDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQP
Sbjct: 933  LMAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQP 992

Query: 181  GLQNKAADALSRVKLPAEFHSLMAHGLLDIDIVTREVEKDEELQGIIEILKEDPDGKANY 240
            GLQNKAADALSR+    E  +L   G++D+++VT+EVEKDEELQ +I+ L+ +P  +  Y
Sbjct: 993  GLQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQLLIQQLQNNPALEGKY 1052

Query: 241  QWKAGNLFYKGRLVLSRKSTLIPSLLHTFHDSVLGGHSGFLRTYKRMNGEIHWMGMKNDV 300
                G L YKGR+VLS+ S++IPSLLHTFHDS+LGGHSGFLRTYKRM+GE+ W GMK D+
Sbjct: 1053 SLTNGTLMYKGRVVLSKSSSIIPSLLHTFHDSILGGHSGFLRTYKRMSGELFWKGMKEDI 1112

Query: 301  KKYVEQCEICQRNKTEALTPAGLLQPLPIPNLILEDWTMDFIEGLPKAGGYDSIMVVVDR 360
            KKYVEQCEICQRNK+EA  PAG+LQPLPIP+ ILEDWTMDFIEGLPKAGG + IMVVVDR
Sbjct: 1113 KKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDR 1172

Query: 361  LSKMAHFIILKHPFSAKQVAEKFVEEIISKHGIPNSIVTDRDKVFLSHFWKELFTAMGTS 420
            LSK A+F+ +KHPFSAKQVA +F+++I+ +HGIP SI++DRDK+F+S+FWKELF AM T 
Sbjct: 1173 LSKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFVSNFWKELFYAMNTI 1232

Query: 421  LKRSTAFHPQTDGQTERVNRCLETYLRCFCNEQPTKWHRCIPWAELWYNTTFHASAKTTP 480
            LKRSTAFHPQTDGQTERVN+CLETYLRCFCNEQP KWH+ IPWAELWYNTTFH+S +TTP
Sbjct: 1233 LKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHSSTRTTP 1292

Query: 481  FQIVYGRPPPPLVRYGDIKSNNNSVEQLLKERDLVISALKENLMMAQNRMKKQADLHRRE 540
            FQ VYGRPPPPL+ YGD K+ N+ VE LLKERDL ISALKENL +AQNRMKK AD  RRE
Sbjct: 1293 FQTVYGRPPPPLISYGDKKTPNDEVEALLKERDLAISALKENLTIAQNRMKKFADSKRRE 1352

Query: 541  LKFKVGDEVYLKLRPYRQRSLARKRCEKLAPKFYGPYRIVEEIGEVAYRLNLPPEAIIHN 600
            LKFKVGDEVYLKLRPYRQRSLARKR EKLAPK+YGPYRI E IGEVAYRL+LPPEA IHN
Sbjct: 1353 LKFKVGDEVYLKLRPYRQRSLARKRAEKLAPKYYGPYRITETIGEVAYRLDLPPEASIHN 1412

Query: 601  VFHVSQLKLKMGNSHQVQHMPPALTEEFELQVEPEAVLGIRWNTDIGANEWLIKWKGLSD 660
            VFH+SQLKLK+GN H VQ   P LT EFELQ+ PE VLGIRW+ ++GANEWL+KWKGL D
Sbjct: 1413 VFHISQLKLKLGNQHNVQIQQPQLTAEFELQLWPETVLGIRWSPELGANEWLVKWKGLPD 1472

Query: 661  SEATWEPVGAMNQQYPSFHLEDKVNFEPTGIVRPPIINTYRRRGRKSNIHIDSPAQDKN 720
            SEATWE V +MNQQ+PSFHLEDKV  EP GIVRPPIIN Y+RRG+K  +H DS  + +N
Sbjct: 1473 SEATWESVYSMNQQFPSFHLEDKVILEPRGIVRPPIINVYKRRGKKGKLH-DSKEEREN 1530

[Close]

BLAST of Cmc02g0039261 vs. NCBI nr
Match: TYK27058.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 1139.8 bits (2947), Expect = 0.0e+00
Identity = 545/719 (75.80%), Postives = 624/719 (86.79%), Query Frame = 0


Query: 1    MVNWPQPTSVSELRGFLGLTGYYRRFVKNYGNIAAPLTKLLQKNGFHWGEDATAAFDSLK 60
            M+ WP+P  V+ LRGFLGLTGYYRRFVK YG IAAPLTKLLQKN F W E+AT AF+SLK
Sbjct: 813  MLQWPKPKDVTGLRGFLGLTGYYRRFVKGYGEIAAPLTKLLQKNAFKWDENATLAFESLK 872

Query: 61   QAMISVPVLALPDFSLPFIIETDASGTGLGAVLSQNHRPIAYFSQKLSPRAQAKSIYERE 120
             AM ++PVLALPD+SLPF+IETDASG+GLGAVLSQN  PIA+FSQKLS RAQAKSIYERE
Sbjct: 873  SAMSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNSHPIAFFSQKLSTRAQAKSIYERE 932

Query: 121  LMAVVMAVQKWRHYVLGRKFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQP 180
            LMAVV++VQKWRHY+LGR+FTI+SDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQP
Sbjct: 933  LMAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQP 992

Query: 181  GLQNKAADALSRVKLPAEFHSLMAHGLLDIDIVTREVEKDEELQGIIEILKEDPDGKANY 240
            GLQNKAADALSR+    E  +L   G++D+++VT+EVEKDEELQ +I+ L+ +P  +  Y
Sbjct: 993  GLQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQLLIQQLQNNPALEGKY 1052

Query: 241  QWKAGNLFYKGRLVLSRKSTLIPSLLHTFHDSVLGGHSGFLRTYKRMNGEIHWMGMKNDV 300
                G L YKGR+VLS+ S++IPSLLHTFHDS+LGGHSGFLRTYKRM+GE+ W GMK D+
Sbjct: 1053 SLTNGTLMYKGRVVLSKSSSIIPSLLHTFHDSILGGHSGFLRTYKRMSGELFWKGMKEDI 1112

Query: 301  KKYVEQCEICQRNKTEALTPAGLLQPLPIPNLILEDWTMDFIEGLPKAGGYDSIMVVVDR 360
            KKYVEQCEICQRNK+EA  PAG+LQPLPIP+ ILEDWTMDFIEGLPKAGG + IMVVVDR
Sbjct: 1113 KKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDR 1172

Query: 361  LSKMAHFIILKHPFSAKQVAEKFVEEIISKHGIPNSIVTDRDKVFLSHFWKELFTAMGTS 420
            LSK A+F+ +KHPFSAKQVA +F+++I+ +HGIP SI++DRDK+F+S+FWKELF AM T 
Sbjct: 1173 LSKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFVSNFWKELFYAMNTI 1232

Query: 421  LKRSTAFHPQTDGQTERVNRCLETYLRCFCNEQPTKWHRCIPWAELWYNTTFHASAKTTP 480
            LKRSTAFHPQTDGQTERVN+CLETYLRCFCNEQP KWH+ IPWAELWYNTTFH+S +TTP
Sbjct: 1233 LKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHSSTRTTP 1292

Query: 481  FQIVYGRPPPPLVRYGDIKSNNNSVEQLLKERDLVISALKENLMMAQNRMKKQADLHRRE 540
            FQ VYGRPPPPL+ YGD K+ N+ VE LLKERDL ISALKENL +AQNRMKK AD  RRE
Sbjct: 1293 FQTVYGRPPPPLISYGDKKTPNDEVEALLKERDLAISALKENLTIAQNRMKKFADSKRRE 1352

Query: 541  LKFKVGDEVYLKLRPYRQRSLARKRCEKLAPKFYGPYRIVEEIGEVAYRLNLPPEAIIHN 600
            LKFKVGDEVYLKLRPYRQRSLARKR EKLAPK+YGPYRI E IGEVAYRL+LPPEA IHN
Sbjct: 1353 LKFKVGDEVYLKLRPYRQRSLARKRAEKLAPKYYGPYRITETIGEVAYRLDLPPEASIHN 1412

Query: 601  VFHVSQLKLKMGNSHQVQHMPPALTEEFELQVEPEAVLGIRWNTDIGANEWLIKWKGLSD 660
            VFH+SQLKLK+GN H VQ   P LT EFELQ+ PE VLGIRW+ ++GANEWL+KWKGL D
Sbjct: 1413 VFHISQLKLKLGNQHNVQIQQPQLTAEFELQLWPETVLGIRWSPELGANEWLVKWKGLPD 1472

Query: 661  SEATWEPVGAMNQQYPSFHLEDKVNFEPTGIVRPPIINTYRRRGRKSNIHIDSPAQDKN 720
            SEATWE V +MNQQ+PSFHLEDKV  EP GIVRPPIIN Y+RRG+K  +H DS  + +N
Sbjct: 1473 SEATWESVYSMNQQFPSFHLEDKVILEPRGIVRPPIINVYKRRGKKGKLH-DSKEEREN 1530

[Close]

BLAST of Cmc02g0039261 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.8e-88
Identity = 209/643 (32.50%), Postives = 331/643 (51.48%), Query Frame = 0


Query: 1    MVNWPQPTSVSELRGFLGLTGYYRRFVKNYGNIAAPLTKLLQKN-GFHWGEDATAAFDSL 60
            ++ W QP +  ELR FLG   Y R+F+     +  PL  LL+K+  + W    T A +++
Sbjct: 630  VLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENI 689

Query: 61   KQAMISVPVLALPDFSLPFIIETDASGTGLGAVLSQNH-----RPIAYFSQKLSPRAQAK 120
            KQ ++S PVL   DFS   ++ETDAS   +GAVLSQ H      P+ Y+S K+S      
Sbjct: 690  KQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNY 749

Query: 121  SIYERELMAVVMAVQKWRHYVLG--RKFTIISDQKAL--KFLLEQREVQPQFQKWLTKLL 180
            S+ ++E++A++ +++ WRHY+      F I++D + L  +   E      +  +W   L 
Sbjct: 750  SVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQ 809

Query: 181  GYDFEILYQPGLQNKAADALSRV-----KLPAEFHSLMAHGLLDIDI-------VTREVE 240
             ++FEI Y+PG  N  ADALSR+      +P +      + +  I I       V  E  
Sbjct: 810  DFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYT 869

Query: 241  KDEELQGIIEILKEDPDGKANYQWKAGNLF-YKGRLVLSRKSTLIPSLLHTFHDSVLGGH 300
             D +L  ++    ED   + N Q K G L   K +++L   + L  +++  +H+     H
Sbjct: 870  NDTKLLNLLN--NEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIH 929

Query: 301  SGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQRNKTEALTPAGLLQPLPIPNLILEDW 360
             G       +     W G++  +++YV+ C  CQ NK+    P G LQP+P      E  
Sbjct: 930  PGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESL 989

Query: 361  TMDFIEGLPKAGGYDSIMVVVDRLSKMAHFIILKHPFSAKQVAEKFVEEIISKHGIPNSI 420
            +MDFI  LP++ GY+++ VVVDR SKMA  +      +A+Q A  F + +I+  G P  I
Sbjct: 990  SMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEI 1049

Query: 421  VTDRDKVFLSHFWKELFTAMGTSLKRSTAFHPQTDGQTERVNRCLETYLRCFCNEQPTKW 480
            + D D +F S  WK+        +K S  + PQTDGQTER N+ +E  LRC C+  P  W
Sbjct: 1050 IADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTW 1109

Query: 481  HRCIPWAELWYNTTFHASAKTTPFQIVYGRPP--PPLVRYGDIKSNNNSVEQLLKERDLV 540
               I   +  YN   H++ + TPF+IV+   P   PL    ++ S ++  ++  +E   V
Sbjct: 1110 VDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL----ELPSFSDKTDENSQETIQV 1169

Query: 541  ISALKENLMMAQNRMKKQADLHRREL-KFKVGDEVYLKLRPYRQRSLARKRCEKLAPKFY 600
               +KE+L     +MKK  D+  +E+ +F+ GD V +K    R ++    +  KLAP F 
Sbjct: 1170 FQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK----RTKTGFLHKSNKLAPSFA 1229

Query: 601  GPYRIVEEIGEVAYRLNLPPEAIIH---NVFHVSQLKLKMGNS 615
            GP+ ++++ G   Y L+L P++I H   + FHVS L+    NS
Sbjct: 1230 GPFYVLQKSGPNNYELDL-PDSIKHMFSSTFHVSHLEKYRHNS 1261

[Close]

BLAST of Cmc02g0039261 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.8e-88
Identity = 209/643 (32.50%), Postives = 331/643 (51.48%), Query Frame = 0


Query: 1    MVNWPQPTSVSELRGFLGLTGYYRRFVKNYGNIAAPLTKLLQKN-GFHWGEDATAAFDSL 60
            ++ W QP +  ELR FLG   Y R+F+     +  PL  LL+K+  + W    T A +++
Sbjct: 630  VLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENI 689

Query: 61   KQAMISVPVLALPDFSLPFIIETDASGTGLGAVLSQNH-----RPIAYFSQKLSPRAQAK 120
            KQ ++S PVL   DFS   ++ETDAS   +GAVLSQ H      P+ Y+S K+S      
Sbjct: 690  KQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNY 749

Query: 121  SIYERELMAVVMAVQKWRHYVLG--RKFTIISDQKAL--KFLLEQREVQPQFQKWLTKLL 180
            S+ ++E++A++ +++ WRHY+      F I++D + L  +   E      +  +W   L 
Sbjct: 750  SVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQ 809

Query: 181  GYDFEILYQPGLQNKAADALSRV-----KLPAEFHSLMAHGLLDIDI-------VTREVE 240
             ++FEI Y+PG  N  ADALSR+      +P +      + +  I I       V  E  
Sbjct: 810  DFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYT 869

Query: 241  KDEELQGIIEILKEDPDGKANYQWKAGNLF-YKGRLVLSRKSTLIPSLLHTFHDSVLGGH 300
             D +L  ++    ED   + N Q K G L   K +++L   + L  +++  +H+     H
Sbjct: 870  NDTKLLNLLN--NEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIH 929

Query: 301  SGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQRNKTEALTPAGLLQPLPIPNLILEDW 360
             G       +     W G++  +++YV+ C  CQ NK+    P G LQP+P      E  
Sbjct: 930  PGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESL 989

Query: 361  TMDFIEGLPKAGGYDSIMVVVDRLSKMAHFIILKHPFSAKQVAEKFVEEIISKHGIPNSI 420
            +MDFI  LP++ GY+++ VVVDR SKMA  +      +A+Q A  F + +I+  G P  I
Sbjct: 990  SMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEI 1049

Query: 421  VTDRDKVFLSHFWKELFTAMGTSLKRSTAFHPQTDGQTERVNRCLETYLRCFCNEQPTKW 480
            + D D +F S  WK+        +K S  + PQTDGQTER N+ +E  LRC C+  P  W
Sbjct: 1050 IADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTW 1109

Query: 481  HRCIPWAELWYNTTFHASAKTTPFQIVYGRPP--PPLVRYGDIKSNNNSVEQLLKERDLV 540
               I   +  YN   H++ + TPF+IV+   P   PL    ++ S ++  ++  +E   V
Sbjct: 1110 VDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL----ELPSFSDKTDENSQETIQV 1169

Query: 541  ISALKENLMMAQNRMKKQADLHRREL-KFKVGDEVYLKLRPYRQRSLARKRCEKLAPKFY 600
               +KE+L     +MKK  D+  +E+ +F+ GD V +K    R ++    +  KLAP F 
Sbjct: 1170 FQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK----RTKTGFLHKSNKLAPSFA 1229

Query: 601  GPYRIVEEIGEVAYRLNLPPEAIIH---NVFHVSQLKLKMGNS 615
            GP+ ++++ G   Y L+L P++I H   + FHVS L+    NS
Sbjct: 1230 GPFYVLQKSGPNNYELDL-PDSIKHMFSSTFHVSHLEKYRHNS 1261

[Close]

BLAST of Cmc02g0039261 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.8e-88
Identity = 209/643 (32.50%), Postives = 331/643 (51.48%), Query Frame = 0


Query: 1    MVNWPQPTSVSELRGFLGLTGYYRRFVKNYGNIAAPLTKLLQKN-GFHWGEDATAAFDSL 60
            ++ W QP +  ELR FLG   Y R+F+     +  PL  LL+K+  + W    T A +++
Sbjct: 630  VLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENI 689

Query: 61   KQAMISVPVLALPDFSLPFIIETDASGTGLGAVLSQNH-----RPIAYFSQKLSPRAQAK 120
            KQ ++S PVL   DFS   ++ETDAS   +GAVLSQ H      P+ Y+S K+S      
Sbjct: 690  KQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNY 749

Query: 121  SIYERELMAVVMAVQKWRHYVLG--RKFTIISDQKAL--KFLLEQREVQPQFQKWLTKLL 180
            S+ ++E++A++ +++ WRHY+      F I++D + L  +   E      +  +W   L 
Sbjct: 750  SVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQ 809

Query: 181  GYDFEILYQPGLQNKAADALSRV-----KLPAEFHSLMAHGLLDIDI-------VTREVE 240
             ++FEI Y+PG  N  ADALSR+      +P +      + +  I I       V  E  
Sbjct: 810  DFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYT 869

Query: 241  KDEELQGIIEILKEDPDGKANYQWKAGNLF-YKGRLVLSRKSTLIPSLLHTFHDSVLGGH 300
             D +L  ++    ED   + N Q K G L   K +++L   + L  +++  +H+     H
Sbjct: 870  NDTKLLNLLN--NEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIH 929

Query: 301  SGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQRNKTEALTPAGLLQPLPIPNLILEDW 360
             G       +     W G++  +++YV+ C  CQ NK+    P G LQP+P      E  
Sbjct: 930  PGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESL 989

Query: 361  TMDFIEGLPKAGGYDSIMVVVDRLSKMAHFIILKHPFSAKQVAEKFVEEIISKHGIPNSI 420
            +MDFI  LP++ GY+++ VVVDR SKMA  +      +A+Q A  F + +I+  G P  I
Sbjct: 990  SMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEI 1049

Query: 421  VTDRDKVFLSHFWKELFTAMGTSLKRSTAFHPQTDGQTERVNRCLETYLRCFCNEQPTKW 480
            + D D +F S  WK+        +K S  + PQTDGQTER N+ +E  LRC C+  P  W
Sbjct: 1050 IADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTW 1109

Query: 481  HRCIPWAELWYNTTFHASAKTTPFQIVYGRPP--PPLVRYGDIKSNNNSVEQLLKERDLV 540
               I   +  YN   H++ + TPF+IV+   P   PL    ++ S ++  ++  +E   V
Sbjct: 1110 VDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL----ELPSFSDKTDENSQETIQV 1169

Query: 541  ISALKENLMMAQNRMKKQADLHRREL-KFKVGDEVYLKLRPYRQRSLARKRCEKLAPKFY 600
               +KE+L     +MKK  D+  +E+ +F+ GD V +K    R ++    +  KLAP F 
Sbjct: 1170 FQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK----RTKTGFLHKSNKLAPSFA 1229

Query: 601  GPYRIVEEIGEVAYRLNLPPEAIIH---NVFHVSQLKLKMGNS 615
            GP+ ++++ G   Y L+L P++I H   + FHVS L+    NS
Sbjct: 1230 GPFYVLQKSGPNNYELDL-PDSIKHMFSSTFHVSHLEKYRHNS 1261

[Close]

BLAST of Cmc02g0039261 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.8e-88
Identity = 209/643 (32.50%), Postives = 331/643 (51.48%), Query Frame = 0


Query: 1    MVNWPQPTSVSELRGFLGLTGYYRRFVKNYGNIAAPLTKLLQKN-GFHWGEDATAAFDSL 60
            ++ W QP +  ELR FLG   Y R+F+     +  PL  LL+K+  + W    T A +++
Sbjct: 630  VLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENI 689

Query: 61   KQAMISVPVLALPDFSLPFIIETDASGTGLGAVLSQNH-----RPIAYFSQKLSPRAQAK 120
            KQ ++S PVL   DFS   ++ETDAS   +GAVLSQ H      P+ Y+S K+S      
Sbjct: 690  KQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNY 749

Query: 121  SIYERELMAVVMAVQKWRHYVLG--RKFTIISDQKAL--KFLLEQREVQPQFQKWLTKLL 180
            S+ ++E++A++ +++ WRHY+      F I++D + L  +   E      +  +W   L 
Sbjct: 750  SVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQ 809

Query: 181  GYDFEILYQPGLQNKAADALSRV-----KLPAEFHSLMAHGLLDIDI-------VTREVE 240
             ++FEI Y+PG  N  ADALSR+      +P +      + +  I I       V  E  
Sbjct: 810  DFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYT 869

Query: 241  KDEELQGIIEILKEDPDGKANYQWKAGNLF-YKGRLVLSRKSTLIPSLLHTFHDSVLGGH 300
             D +L  ++    ED   + N Q K G L   K +++L   + L  +++  +H+     H
Sbjct: 870  NDTKLLNLLN--NEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIH 929

Query: 301  SGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQRNKTEALTPAGLLQPLPIPNLILEDW 360
             G       +     W G++  +++YV+ C  CQ NK+    P G LQP+P      E  
Sbjct: 930  PGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESL 989

Query: 361  TMDFIEGLPKAGGYDSIMVVVDRLSKMAHFIILKHPFSAKQVAEKFVEEIISKHGIPNSI 420
            +MDFI  LP++ GY+++ VVVDR SKMA  +      +A+Q A  F + +I+  G P  I
Sbjct: 990  SMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEI 1049

Query: 421  VTDRDKVFLSHFWKELFTAMGTSLKRSTAFHPQTDGQTERVNRCLETYLRCFCNEQPTKW 480
            + D D +F S  WK+        +K S  + PQTDGQTER N+ +E  LRC C+  P  W
Sbjct: 1050 IADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTW 1109

Query: 481  HRCIPWAELWYNTTFHASAKTTPFQIVYGRPP--PPLVRYGDIKSNNNSVEQLLKERDLV 540
               I   +  YN   H++ + TPF+IV+   P   PL    ++ S ++  ++  +E   V
Sbjct: 1110 VDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL----ELPSFSDKTDENSQETIQV 1169

Query: 541  ISALKENLMMAQNRMKKQADLHRREL-KFKVGDEVYLKLRPYRQRSLARKRCEKLAPKFY 600
               +KE+L     +MKK  D+  +E+ +F+ GD V +K    R ++    +  KLAP F 
Sbjct: 1170 FQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK----RTKTGFLHKSNKLAPSFA 1229

Query: 601  GPYRIVEEIGEVAYRLNLPPEAIIH---NVFHVSQLKLKMGNS 615
            GP+ ++++ G   Y L+L P++I H   + FHVS L+    NS
Sbjct: 1230 GPFYVLQKSGPNNYELDL-PDSIKHMFSSTFHVSHLEKYRHNS 1261

[Close]

BLAST of Cmc02g0039261 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.8e-88
Identity = 209/643 (32.50%), Postives = 331/643 (51.48%), Query Frame = 0


Query: 1    MVNWPQPTSVSELRGFLGLTGYYRRFVKNYGNIAAPLTKLLQKN-GFHWGEDATAAFDSL 60
            ++ W QP +  ELR FLG   Y R+F+     +  PL  LL+K+  + W    T A +++
Sbjct: 630  VLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENI 689

Query: 61   KQAMISVPVLALPDFSLPFIIETDASGTGLGAVLSQNH-----RPIAYFSQKLSPRAQAK 120
            KQ ++S PVL   DFS   ++ETDAS   +GAVLSQ H      P+ Y+S K+S      
Sbjct: 690  KQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNY 749

Query: 121  SIYERELMAVVMAVQKWRHYVLG--RKFTIISDQKAL--KFLLEQREVQPQFQKWLTKLL 180
            S+ ++E++A++ +++ WRHY+      F I++D + L  +   E      +  +W   L 
Sbjct: 750  SVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQ 809

Query: 181  GYDFEILYQPGLQNKAADALSRV-----KLPAEFHSLMAHGLLDIDI-------VTREVE 240
             ++FEI Y+PG  N  ADALSR+      +P +      + +  I I       V  E  
Sbjct: 810  DFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYT 869

Query: 241  KDEELQGIIEILKEDPDGKANYQWKAGNLF-YKGRLVLSRKSTLIPSLLHTFHDSVLGGH 300
             D +L  ++    ED   + N Q K G L   K +++L   + L  +++  +H+     H
Sbjct: 870  NDTKLLNLLN--NEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIH 929

Query: 301  SGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQRNKTEALTPAGLLQPLPIPNLILEDW 360
             G       +     W G++  +++YV+ C  CQ NK+    P G LQP+P      E  
Sbjct: 930  PGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESL 989

Query: 361  TMDFIEGLPKAGGYDSIMVVVDRLSKMAHFIILKHPFSAKQVAEKFVEEIISKHGIPNSI 420
            +MDFI  LP++ GY+++ VVVDR SKMA  +      +A+Q A  F + +I+  G P  I
Sbjct: 990  SMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEI 1049

Query: 421  VTDRDKVFLSHFWKELFTAMGTSLKRSTAFHPQTDGQTERVNRCLETYLRCFCNEQPTKW 480
            + D D +F S  WK+        +K S  + PQTDGQTER N+ +E  LRC C+  P  W
Sbjct: 1050 IADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTW 1109

Query: 481  HRCIPWAELWYNTTFHASAKTTPFQIVYGRPP--PPLVRYGDIKSNNNSVEQLLKERDLV 540
               I   +  YN   H++ + TPF+IV+   P   PL    ++ S ++  ++  +E   V
Sbjct: 1110 VDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL----ELPSFSDKTDENSQETIQV 1169

Query: 541  ISALKENLMMAQNRMKKQADLHRREL-KFKVGDEVYLKLRPYRQRSLARKRCEKLAPKFY 600
               +KE+L     +MKK  D+  +E+ +F+ GD V +K    R ++    +  KLAP F 
Sbjct: 1170 FQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK----RTKTGFLHKSNKLAPSFA 1229

Query: 601  GPYRIVEEIGEVAYRLNLPPEAIIH---NVFHVSQLKLKMGNS 615
            GP+ ++++ G   Y L+L P++I H   + FHVS L+    NS
Sbjct: 1230 GPFYVLQKSGPNNYELDL-PDSIKHMFSSTFHVSHLEKYRHNS 1261

[Close]

BLAST of Cmc02g0039261 vs. ExPASy TrEMBL
Match: A0A5D3BFZ9 (Transposon Tf2-6 polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold401G00130 PE=4 SV=1)

HSP 1 Score: 1359.7 bits (3518), Expect = 0.0e+00
Identity = 659/683 (96.49%), Postives = 672/683 (98.39%), Query Frame = 0


Query: 1   MVNWPQPTSVSELRGFLGLTGYYRRFVKNYGNIAAPLTKLLQKNGFHWGEDATAAFDSLK 60
           MVNWPQPT+VSELRGFLGLTGYYRRFVKNYGNIAAPLTKLLQKNGFHWGEDATAAF+SLK
Sbjct: 1   MVNWPQPTNVSELRGFLGLTGYYRRFVKNYGNIAAPLTKLLQKNGFHWGEDATAAFESLK 60

Query: 61  QAMISVPVLALPDFSLPFIIETDASGTGLGAVLSQNHRPIAYFSQKLSPRAQAKSIYERE 120
           QAMISVPVLALPDFSLPFIIETDASGTGLGAVLSQN+RPIAYFSQKLSP  QAKSIYERE
Sbjct: 61  QAMISVPVLALPDFSLPFIIETDASGTGLGAVLSQNNRPIAYFSQKLSPPTQAKSIYERE 120

Query: 121 LMAVVMAVQKWRHYVLGRKFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQP 180
           LMAVVMAVQKWRHYVL  KFTIISDQKALKFLLEQREVQPQFQ+WLTKLLGYDFEILYQP
Sbjct: 121 LMAVVMAVQKWRHYVLDFKFTIISDQKALKFLLEQREVQPQFQRWLTKLLGYDFEILYQP 180

Query: 181 GLQNKAADALSRVKLPAEFHSLMAHGLLDIDIVTREVEKDEELQGIIEILKEDPDGKANY 240
           GLQNKAADALSRVKLPAEFHSL AHGLLDIDIVT EVEKDEELQGIIEILKEDP+GKANY
Sbjct: 181 GLQNKAADALSRVKLPAEFHSLRAHGLLDIDIVTTEVEKDEELQGIIEILKEDPEGKANY 240

Query: 241 QWKAGNLFYKGRLVLSRKSTLIPSLLHTFHDSVLGGHSGFLRTYKRMNGEIHWMGMKNDV 300
           QWKAGNLFYKGRLVLSRKSTLIPSLLHTFHDSVLGGH GFLRTYKRMNGEIHWMGMKNDV
Sbjct: 241 QWKAGNLFYKGRLVLSRKSTLIPSLLHTFHDSVLGGHLGFLRTYKRMNGEIHWMGMKNDV 300

Query: 301 KKYVEQCEICQRNKTEALTPAGLLQPLPIPNLILEDWTMDFIEGLPKAGGYDSIMVVVDR 360
           KKYVEQCE+CQRNKTEAL PAGLLQPLP+PNLILEDWTMDFI+GLPKAGGYD+IMVVVDR
Sbjct: 301 KKYVEQCEVCQRNKTEALAPAGLLQPLPLPNLILEDWTMDFIDGLPKAGGYDNIMVVVDR 360

Query: 361 LSKMAHFIILKHPFSAKQVAEKFVEEIISKHGIPNSIVTDRDKVFLSHFWKELFTAMGTS 420
           LSKMAHFIILKHPFSAKQVAEKFVEEIISKHGI NSIVTDRDKVFLSHFWKELFTAMGTS
Sbjct: 361 LSKMAHFIILKHPFSAKQVAEKFVEEIISKHGISNSIVTDRDKVFLSHFWKELFTAMGTS 420

Query: 421 LKRSTAFHPQTDGQTERVNRCLETYLRCFCNEQPTKWHRCIPWAELWYNTTFHASAKTTP 480
           LKRSTAFHPQTDGQTERVNRCLETYLRCFCNEQPTKWH+CIPWAELWYNTTFHA AKTTP
Sbjct: 421 LKRSTAFHPQTDGQTERVNRCLETYLRCFCNEQPTKWHKCIPWAELWYNTTFHALAKTTP 480

Query: 481 FQIVYGRPPPPLVRYGDIKSNNNSVEQLLKERDLVISALKENLMMAQNRMKKQADLHRRE 540
           FQ+VYGRPPPPLVRYGDIKSNNNSVEQLLKERDLVISALKENLMMAQNRMKKQADLHRRE
Sbjct: 481 FQVVYGRPPPPLVRYGDIKSNNNSVEQLLKERDLVISALKENLMMAQNRMKKQADLHRRE 540

Query: 541 LKFKVGDEVYLKLRPYRQRSLARKRCEKLAPKFYGPYRIVEEIGEVAYRLNLPPEAIIHN 600
           LKFKVGDEVYLKLRPYRQRSLARKRCEKLAPKFYGPYRIVEEIGEVAYRLNLPPEAIIHN
Sbjct: 541 LKFKVGDEVYLKLRPYRQRSLARKRCEKLAPKFYGPYRIVEEIGEVAYRLNLPPEAIIHN 600

Query: 601 VFHVSQLKLKMGNSHQVQHMPPALTEEFELQVEPEAVLGIRWNTDIGANEWLIKWKGLSD 660
           VFHVSQLKLK+GNSHQVQH+PPALTEEFELQVEPEAVLGIRWNTDIGANEWLIKWKGLS 
Sbjct: 601 VFHVSQLKLKLGNSHQVQHVPPALTEEFELQVEPEAVLGIRWNTDIGANEWLIKWKGLSG 660

Query: 661 SEATWEPVGAMNQQYPSFHLEDK 684
           SEATWEPVGAMNQQYPSFHLEDK
Sbjct: 661 SEATWEPVGAMNQQYPSFHLEDK 683

[Close]

BLAST of Cmc02g0039261 vs. ExPASy TrEMBL
Match: A0A5A7VHA7 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold25G001140 PE=4 SV=1)

HSP 1 Score: 1330.5 bits (3442), Expect = 0.0e+00
Identity = 647/669 (96.71%), Postives = 658/669 (98.36%), Query Frame = 0


Query: 15   GFLGLTGYYRRFVKNYGNIAAPLTKLLQKNGFHWGEDATAAFDSLKQAMISVPVLALPDF 74
            GFLGLTGYYRRFVKNYGNIAAPLTKLLQKNGFHWGEDATAAF+SLKQAMISVPVLALPDF
Sbjct: 692  GFLGLTGYYRRFVKNYGNIAAPLTKLLQKNGFHWGEDATAAFESLKQAMISVPVLALPDF 751

Query: 75   SLPFIIETDASGTGLGAVLSQNHRPIAYFSQKLSPRAQAKSIYERELMAVVMAVQKWRHY 134
            SLPFIIETDASGTGLGAVLSQN+RPIAYFSQKLSP  QAKSIYERELMAVVMAVQKWR Y
Sbjct: 752  SLPFIIETDASGTGLGAVLSQNNRPIAYFSQKLSPPTQAKSIYERELMAVVMAVQKWRRY 811

Query: 135  VLGRKFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPGLQNKAADALSRVK 194
            VL  KFTIISDQKALKFLLEQREVQPQFQ+WLTKLLGYDFEILYQPGLQNKAADALSRVK
Sbjct: 812  VLDFKFTIISDQKALKFLLEQREVQPQFQRWLTKLLGYDFEILYQPGLQNKAADALSRVK 871

Query: 195  LPAEFHSLMAHGLLDIDIVTREVEKDEELQGIIEILKEDPDGKANYQWKAGNLFYKGRLV 254
            LPAEFHSL AHGLLDIDIVT EVEKDEELQGIIEILKEDP+GKANYQWKAGNLFYKGRLV
Sbjct: 872  LPAEFHSLRAHGLLDIDIVTTEVEKDEELQGIIEILKEDPEGKANYQWKAGNLFYKGRLV 931

Query: 255  LSRKSTLIPSLLHTFHDSVLGGHSGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEICQRNK 314
            LSRKSTLIPSLLHTFHDSVLGGH GFLRTYKRMNGEIHWMGMKNDVKKYVEQCE+CQRNK
Sbjct: 932  LSRKSTLIPSLLHTFHDSVLGGHLGFLRTYKRMNGEIHWMGMKNDVKKYVEQCEVCQRNK 991

Query: 315  TEALTPAGLLQPLPIPNLILEDWTMDFIEGLPKAGGYDSIMVVVDRLSKMAHFIILKHPF 374
            TEAL PAGLLQPLP+PNLILEDWTMDFIEGLPKAGGYDSIMVVVDRLSKMAHFIILKHPF
Sbjct: 992  TEALAPAGLLQPLPLPNLILEDWTMDFIEGLPKAGGYDSIMVVVDRLSKMAHFIILKHPF 1051

Query: 375  SAKQVAEKFVEEIISKHGIPNSIVTDRDKVFLSHFWKELFTAMGTSLKRSTAFHPQTDGQ 434
            SAKQVAEKFVEEIISKHGI NSIVTDRDKVFLSHFWKELFTAMGTSLKRSTAFHPQTDGQ
Sbjct: 1052 SAKQVAEKFVEEIISKHGISNSIVTDRDKVFLSHFWKELFTAMGTSLKRSTAFHPQTDGQ 1111

Query: 435  TERVNRCLETYLRCFCNEQPTKWHRCIPWAELWYNTTFHASAKTTPFQIVYGRPPPPLVR 494
            TERVNRCLETYLRCFCNEQPTKWH+CIPWAELWYNTTFHASAKTTPFQ+VYGRPPPPLVR
Sbjct: 1112 TERVNRCLETYLRCFCNEQPTKWHKCIPWAELWYNTTFHASAKTTPFQVVYGRPPPPLVR 1171

Query: 495  YGDIKSNNNSVEQLLKERDLVISALKENLMMAQNRMKKQADLHRRELKFKVGDEVYLKLR 554
            YGDIKSNNNSVEQLLKERDLVISALKENLMMAQNRMKKQADLHR+ELKFKVGDEVYLKLR
Sbjct: 1172 YGDIKSNNNSVEQLLKERDLVISALKENLMMAQNRMKKQADLHRKELKFKVGDEVYLKLR 1231

Query: 555  PYRQRSLARKRCEKLAPKFYGPYRIVEEIGEVAYRLNLPPEAIIHNVFHVSQLKLKMGNS 614
            PYRQRSLARKRCEKLAPKFYGPYRIVEEIGEVAYRLNLPPEAIIHNVFHVSQLKLK+GNS
Sbjct: 1232 PYRQRSLARKRCEKLAPKFYGPYRIVEEIGEVAYRLNLPPEAIIHNVFHVSQLKLKLGNS 1291

Query: 615  HQVQHMPPALTEEFELQVEPEAVLGIRWNTDIGANEWLIKWKGLSDSEATWEPVGAMNQQ 674
            HQVQH+PPALTEEFELQVEPEAVLGIRWNTDIGANEWLIKWKGLS SEATWEPVGAMNQQ
Sbjct: 1292 HQVQHVPPALTEEFELQVEPEAVLGIRWNTDIGANEWLIKWKGLSGSEATWEPVGAMNQQ 1351

Query: 675  YPSFHLEDK 684
            YPSFHLEDK
Sbjct: 1352 YPSFHLEDK 1360

[Close]

BLAST of Cmc02g0039261 vs. ExPASy TrEMBL
Match: A0A5D3CUI1 (Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45G001350 PE=4 SV=1)

HSP 1 Score: 1145.2 bits (2961), Expect = 0.0e+00
Identity = 575/689 (83.45%), Postives = 596/689 (86.50%), Query Frame = 0


Query: 1   MVNWPQPTSVSELRGFLGLTGYYRRFVKNYGNIAAPLTKLLQKNGFHWGEDATAAFDSLK 60
           MVNWPQPT+VSELRGFLGLTGYYRRFVKNYGNIAAPLTKLLQKNGFHWG+DAT  F+SLK
Sbjct: 140 MVNWPQPTNVSELRGFLGLTGYYRRFVKNYGNIAAPLTKLLQKNGFHWGDDATTTFESLK 199

Query: 61  QAMISVPVLALPDFSLPFIIETDASGTGLGAVLSQNHRPIAYFSQKLSPRAQAKSIYERE 120
           QAMISVPVLALPDFSLPFIIETDASGTGLGAVLSQN+RPIAYFSQKLSPRAQAKSIYERE
Sbjct: 200 QAMISVPVLALPDFSLPFIIETDASGTGLGAVLSQNNRPIAYFSQKLSPRAQAKSIYERE 259

Query: 121 LMAVVMAVQKWRHYVLGRKFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQP 180
           LMAVVMA+QK                          EVQPQFQ+WLTKLL YDFEILYQP
Sbjct: 260 LMAVVMAIQK--------------------------EVQPQFQRWLTKLLEYDFEILYQP 319

Query: 181 GLQNKAADALSRVKLPAEFHSLMAHGLLDIDIVTREVEKDEELQGIIEILKEDPDGKANY 240
           GLQNKAADALSRVKLPAE  SL AHGL DI+IVT EVEKDEELQGII ILKE+P+GKANY
Sbjct: 320 GLQNKAADALSRVKLPAELSSLRAHGLFDIEIVTAEVEKDEELQGIINILKENPEGKANY 379

Query: 241 QWKAGNLFYKGRLVLSRKSTLIPSLLHTFHDSVLGGHSGFLRTYKRMNGEIHWMGMKNDV 300
           QWK+GNL YKGRLVLSR STLIPSLLHTFHDSVLGGHSGFLRTYKRMN EIHWMGMKNDV
Sbjct: 380 QWKSGNLLYKGRLVLSRNSTLIPSLLHTFHDSVLGGHSGFLRTYKRMNREIHWMGMKNDV 439

Query: 301 KKYVEQCEICQRNKTEALTPAGLLQPLPIPNLILEDWTMDFIEGLPKAGGYDSIMVVVDR 360
           KKYVEQCEICQRNKTEAL PAGLLQPLP+PNLIL                  SIMVVVDR
Sbjct: 440 KKYVEQCEICQRNKTEALAPAGLLQPLPLPNLILA----------------ASIMVVVDR 499

Query: 361 LSKMAHFIILKHPFSAKQVAEKFVEEIISKHGIPNSIVTDRDKVFLSHFWKELFTAMGTS 420
            SKMAHFI LKHPF+AKQVAEK VEEIISKHGIPNSIV DRDK+FLS+ WKELFTAMGTS
Sbjct: 500 SSKMAHFITLKHPFTAKQVAEKIVEEIISKHGIPNSIVIDRDKIFLSYLWKELFTAMGTS 559

Query: 421 LKRSTAFHPQTDGQTERVNRCLETYLRCFCNEQPTKWHRCIPWAELWYNTTFHASAKTTP 480
           LKRSTAFHPQTDGQTERV+RCLETYLR FCNEQPTKWH+CIPWAELWYNTTFHAS KTTP
Sbjct: 560 LKRSTAFHPQTDGQTERVDRCLETYLRSFCNEQPTKWHKCIPWAELWYNTTFHASTKTTP 619

Query: 481 FQIVYGRPPPPLVRYGDIKSNNNSVEQLLKERDLVISALKENLMMAQNRMKKQADLHRRE 540
           F                         QLLKERDLVISALKENLMMAQNRMKKQADLHRRE
Sbjct: 620 F-------------------------QLLKERDLVISALKENLMMAQNRMKKQADLHRRE 679

Query: 541 LKFKVGDEVYLKLRPYRQRSLARKRCEKLAPKFYGPYRIVEEIGEVAYRLNLPPEAIIHN 600
           LKF+VGDEVYLKLRPYRQRSLARKRCEKLAPKFYGPYRI+EEIGEVAYRLNLPP AIIHN
Sbjct: 680 LKFRVGDEVYLKLRPYRQRSLARKRCEKLAPKFYGPYRIIEEIGEVAYRLNLPPGAIIHN 739

Query: 601 VFHVSQLKLKMGNSHQVQHMPPALTEEFELQVEPEAVLGIRWNTDIGANEWLIKWKGLSD 660
           VFHVSQLKLK+GNSHQVQH+PPALTEEFELQVEPEAVLGIRWNT+IGANEWLIKWKGL D
Sbjct: 740 VFHVSQLKLKLGNSHQVQHVPPALTEEFELQVEPEAVLGIRWNTEIGANEWLIKWKGLPD 761

Query: 661 SEATWEPVGAMNQQYPSFHLEDKVNFEPT 690
           SEATWE V AMNQQYPSFHLEDKVNFEPT
Sbjct: 800 SEATWESVYAMNQQYPSFHLEDKVNFEPT 761

[Close]

BLAST of Cmc02g0039261 vs. ExPASy TrEMBL
Match: A0A5D3E325 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold426G00690 PE=4 SV=1)

HSP 1 Score: 1139.8 bits (2947), Expect = 0.0e+00
Identity = 545/719 (75.80%), Postives = 624/719 (86.79%), Query Frame = 0


Query: 1    MVNWPQPTSVSELRGFLGLTGYYRRFVKNYGNIAAPLTKLLQKNGFHWGEDATAAFDSLK 60
            M+ WP+P  V+ LRGFLGLTGYYRRFVK YG IAAPLTKLLQKN F W E+AT AF+SLK
Sbjct: 813  MLQWPKPKDVTGLRGFLGLTGYYRRFVKGYGEIAAPLTKLLQKNAFKWDENATLAFESLK 872

Query: 61   QAMISVPVLALPDFSLPFIIETDASGTGLGAVLSQNHRPIAYFSQKLSPRAQAKSIYERE 120
             AM ++PVLALPD+SLPF+IETDASG+GLGAVLSQN  PIA+FSQKLS RAQAKSIYERE
Sbjct: 873  SAMSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNSHPIAFFSQKLSTRAQAKSIYERE 932

Query: 121  LMAVVMAVQKWRHYVLGRKFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQP 180
            LMAVV++VQKWRHY+LGR+FTI+SDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQP
Sbjct: 933  LMAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQP 992

Query: 181  GLQNKAADALSRVKLPAEFHSLMAHGLLDIDIVTREVEKDEELQGIIEILKEDPDGKANY 240
            GLQNKAADALSR+    E  +L   G++D+++VT+EVEKDEELQ +I+ L+ +P  +  Y
Sbjct: 993  GLQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQLLIQQLQNNPALEGKY 1052

Query: 241  QWKAGNLFYKGRLVLSRKSTLIPSLLHTFHDSVLGGHSGFLRTYKRMNGEIHWMGMKNDV 300
                G L YKGR+VLS+ S++IPSLLHTFHDS+LGGHSGFLRTYKRM+GE+ W GMK D+
Sbjct: 1053 SLTNGTLMYKGRVVLSKSSSIIPSLLHTFHDSILGGHSGFLRTYKRMSGELFWKGMKEDI 1112

Query: 301  KKYVEQCEICQRNKTEALTPAGLLQPLPIPNLILEDWTMDFIEGLPKAGGYDSIMVVVDR 360
            KKYVEQCEICQRNK+EA  PAG+LQPLPIP+ ILEDWTMDFIEGLPKAGG + IMVVVDR
Sbjct: 1113 KKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDR 1172

Query: 361  LSKMAHFIILKHPFSAKQVAEKFVEEIISKHGIPNSIVTDRDKVFLSHFWKELFTAMGTS 420
            LSK A+F+ +KHPFSAKQVA +F+++I+ +HGIP SI++DRDK+F+S+FWKELF AM T 
Sbjct: 1173 LSKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFVSNFWKELFYAMNTI 1232

Query: 421  LKRSTAFHPQTDGQTERVNRCLETYLRCFCNEQPTKWHRCIPWAELWYNTTFHASAKTTP 480
            LKRSTAFHPQTDGQTERVN+CLETYLRCFCNEQP KWH+ IPWAELWYNTTFH+S +TTP
Sbjct: 1233 LKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHSSTRTTP 1292

Query: 481  FQIVYGRPPPPLVRYGDIKSNNNSVEQLLKERDLVISALKENLMMAQNRMKKQADLHRRE 540
            FQ VYGRPPPPL+ YGD K+ N+ VE LLKERDL ISALKENL +AQNRMKK AD  RRE
Sbjct: 1293 FQTVYGRPPPPLISYGDKKTPNDEVEALLKERDLAISALKENLTIAQNRMKKFADSKRRE 1352

Query: 541  LKFKVGDEVYLKLRPYRQRSLARKRCEKLAPKFYGPYRIVEEIGEVAYRLNLPPEAIIHN 600
            LKFKVGDEVYLKLRPYRQRSLARKR EKLAPK+YGPYRI E IGEVAYRL+LPPEA IHN
Sbjct: 1353 LKFKVGDEVYLKLRPYRQRSLARKRAEKLAPKYYGPYRITETIGEVAYRLDLPPEASIHN 1412

Query: 601  VFHVSQLKLKMGNSHQVQHMPPALTEEFELQVEPEAVLGIRWNTDIGANEWLIKWKGLSD 660
            VFH+SQLKLK+GN H VQ   P LT EFELQ+ PE VLGIRW+ ++GANEWL+KWKGL D
Sbjct: 1413 VFHISQLKLKLGNQHNVQIQQPQLTAEFELQLWPETVLGIRWSPELGANEWLVKWKGLPD 1472

Query: 661  SEATWEPVGAMNQQYPSFHLEDKVNFEPTGIVRPPIINTYRRRGRKSNIHIDSPAQDKN 720
            SEATWE V +MNQQ+PSFHLEDKV  EP GIVRPPIIN Y+RRG+K  +H DS  + +N
Sbjct: 1473 SEATWESVYSMNQQFPSFHLEDKVILEPRGIVRPPIINVYKRRGKKGKLH-DSKEEREN 1530

[Close]

BLAST of Cmc02g0039261 vs. ExPASy TrEMBL
Match: A0A5D3DWA9 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001670 PE=4 SV=1)

HSP 1 Score: 1139.8 bits (2947), Expect = 0.0e+00
Identity = 545/719 (75.80%), Postives = 624/719 (86.79%), Query Frame = 0


Query: 1    MVNWPQPTSVSELRGFLGLTGYYRRFVKNYGNIAAPLTKLLQKNGFHWGEDATAAFDSLK 60
            M+ WP+P  V+ LRGFLGLTGYYRRFVK YG IAAPLTKLLQKN F W E+AT AF+SLK
Sbjct: 813  MLQWPKPKDVTGLRGFLGLTGYYRRFVKGYGEIAAPLTKLLQKNAFKWDENATLAFESLK 872

Query: 61   QAMISVPVLALPDFSLPFIIETDASGTGLGAVLSQNHRPIAYFSQKLSPRAQAKSIYERE 120
             AM ++PVLALPD+SLPF+IETDASG+GLGAVLSQN  PIA+FSQKLS RAQAKSIYERE
Sbjct: 873  SAMSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNSHPIAFFSQKLSTRAQAKSIYERE 932

Query: 121  LMAVVMAVQKWRHYVLGRKFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQP 180
            LMAVV++VQKWRHY+LGR+FTI+SDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQP
Sbjct: 933  LMAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQP 992

Query: 181  GLQNKAADALSRVKLPAEFHSLMAHGLLDIDIVTREVEKDEELQGIIEILKEDPDGKANY 240
            GLQNKAADALSR+    E  +L   G++D+++VT+EVEKDEELQ +I+ L+ +P  +  Y
Sbjct: 993  GLQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQLLIQQLQNNPALEGKY 1052

Query: 241  QWKAGNLFYKGRLVLSRKSTLIPSLLHTFHDSVLGGHSGFLRTYKRMNGEIHWMGMKNDV 300
                G L YKGR+VLS+ S++IPSLLHTFHDS+LGGHSGFLRTYKRM+GE+ W GMK D+
Sbjct: 1053 SLTNGTLMYKGRVVLSKSSSIIPSLLHTFHDSILGGHSGFLRTYKRMSGELFWKGMKEDI 1112

Query: 301  KKYVEQCEICQRNKTEALTPAGLLQPLPIPNLILEDWTMDFIEGLPKAGGYDSIMVVVDR 360
            KKYVEQCEICQRNK+EA  PAG+LQPLPIP+ ILEDWTMDFIEGLPKAGG + IMVVVDR
Sbjct: 1113 KKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDR 1172

Query: 361  LSKMAHFIILKHPFSAKQVAEKFVEEIISKHGIPNSIVTDRDKVFLSHFWKELFTAMGTS 420
            LSK A+F+ +KHPFSAKQVA +F+++I+ +HGIP SI++DRDK+F+S+FWKELF AM T 
Sbjct: 1173 LSKYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFVSNFWKELFYAMNTI 1232

Query: 421  LKRSTAFHPQTDGQTERVNRCLETYLRCFCNEQPTKWHRCIPWAELWYNTTFHASAKTTP 480
            LKRSTAFHPQTDGQTERVN+CLETYLRCFCNEQP KWH+ IPWAELWYNTTFH+S +TTP
Sbjct: 1233 LKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHSSTRTTP 1292

Query: 481  FQIVYGRPPPPLVRYGDIKSNNNSVEQLLKERDLVISALKENLMMAQNRMKKQADLHRRE 540
            FQ VYGRPPPPL+ YGD K+ N+ VE LLKERDL ISALKENL +AQNRMKK AD  RRE
Sbjct: 1293 FQTVYGRPPPPLISYGDKKTPNDEVEALLKERDLAISALKENLTIAQNRMKKFADSKRRE 1352

Query: 541  LKFKVGDEVYLKLRPYRQRSLARKRCEKLAPKFYGPYRIVEEIGEVAYRLNLPPEAIIHN 600
            LKFKVGDEVYLKLRPYRQRSLARKR EKLAPK+YGPYRI E IGEVAYRL+LPPEA IHN
Sbjct: 1353 LKFKVGDEVYLKLRPYRQRSLARKRAEKLAPKYYGPYRITETIGEVAYRLDLPPEASIHN 1412

Query: 601  VFHVSQLKLKMGNSHQVQHMPPALTEEFELQVEPEAVLGIRWNTDIGANEWLIKWKGLSD 660
            VFH+SQLKLK+GN H VQ   P LT EFELQ+ PE VLGIRW+ ++GANEWL+KWKGL D
Sbjct: 1413 VFHISQLKLKLGNQHNVQIQQPQLTAEFELQLWPETVLGIRWSPELGANEWLVKWKGLPD 1472

Query: 661  SEATWEPVGAMNQQYPSFHLEDKVNFEPTGIVRPPIINTYRRRGRKSNIHIDSPAQDKN 720
            SEATWE V +MNQQ+PSFHLEDKV  EP GIVRPPIIN Y+RRG+K  +H DS  + +N
Sbjct: 1473 SEATWESVYSMNQQFPSFHLEDKVILEPRGIVRPPIINVYKRRGKKGKLH-DSKEEREN 1530

[Close]

BLAST of Cmc02g0039261 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 114.4 bits (285), Expect = 3.8e-25
Identity = 51/79 (64.56%), Postives = 61/79 (77.22%), Query Frame = 0


Query: 1   MVNWPQPTSVSELRGFLGLTGYYRRFVKNYGNIAAPLTKLLQKNGFHWGEDATAAFDSLK 60
           MV WP+P + +ELRGFLGLTGYYRRFVKNYG I  PLT+LL+KN   W E A  AF +LK
Sbjct: 54  MVGWPEPKNTTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNSLKWTEMAALAFKALK 113

Query: 61  QAMISVPVLALPDFSLPFI 80
            A+ ++PVLALPD  LPF+
Sbjct: 114 GAVTTLPVLALPDLKLPFV 132

The following BLAST results are available for this feature:

BLAST of Cmc02g0039261 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ98047.1	0.0e+00	96.49	Transposon Tf2-6 polyprotein [Cucumis melo var. makuwa]	[more]
KAA0066550.1	0.0e+00	96.71	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0054183.1	0.0e+00	83.45	Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa] >TYK15080.1 Tran...	[more]
TYK21035.1	0.0e+00	75.80	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK30523.1 Ty3/gyp...	[more]
TYK27058.1	0.0e+00	75.80	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc02g0039261 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	1.8e-88	32.50	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	1.8e-88	32.50	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	1.8e-88	32.50	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	1.8e-88	32.50	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	1.8e-88	32.50	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc02g0039261 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BFZ9	0.0e+00	96.49	Transposon Tf2-6 polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A5A7VHA7	0.0e+00	96.71	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3CUI1	0.0e+00	83.45	Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5D3E325	0.0e+00	75.80	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3DWA9	0.0e+00	75.80	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of Cmc02g0039261 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	3.8e-25	64.56	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 516..536
None	No IPR available	GENE3D	2.40.50.40		coord: 625..681 e-value: 8.4E-8 score: 33.7
None	No IPR available	GENE3D	1.10.340.70		coord: 228..314 e-value: 8.3E-16 score: 60.0
None	No IPR available	GENE3D	3.10.20.370		coord: 75..143 e-value: 9.3E-14 score: 53.2
None	No IPR available	PANTHER	PTHR45835	YALI0A06105P	coord: 266..482 coord: 28..192
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 79..192 e-value: 8.56021E-52 score: 173.448
IPR000953	Chromo/chromo shadow domain	SMART	SM00298	chromo_7	coord: 630..688 e-value: 1.6E-4 score: 31.1
IPR000953	Chromo/chromo shadow domain	PROSITE	PS50013	CHROMO_2	coord: 632..667 score: 11.670601
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 336..429 e-value: 3.7E-8 score: 33.6
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 324..488 score: 21.342049
IPR041577	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	PFAM	PF17919	RT_RNaseH_2	coord: 48..142 e-value: 1.2E-34 score: 118.3
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 325..526 e-value: 5.0E-51 score: 174.8
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 1..74 e-value: 7.1E-27 score: 95.3
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 260..315 e-value: 5.4E-17 score: 61.6
IPR023780	Chromo domain	PFAM	PF00385	Chromo	coord: 633..667 e-value: 7.7E-7 score: 28.9
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 326..488
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	54160	Chromo domain-like	coord: 598..674
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc02g0039261.1	Cmc02g0039261.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010158	abaxial cell fate specification
biological_process	GO:0071897	DNA biosynthetic process
biological_process	GO:0015074	DNA integration
biological_process	GO:0006281	DNA repair
biological_process	GO:0006260	DNA replication
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0008622	epsilon DNA polymerase complex
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0003887	DNA-directed DNA polymerase activity
molecular_function	GO:0000976	transcription cis-regulatory region binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003676	nucleic acid binding