Cmc02g0038181 (gene) Melon (Charmono) v1.1

Overview
NameCmc02g0038181
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionER membrane protein complex subunit 6
LocationCMiso1.1chr02: 688889 .. 693545 (+)
RNA-Seq ExpressionCmc02g0038181
SyntenyCmc02g0038181
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATTCATATTACTCTCAATAATCTTTTCTACCATTAGATATATAAATATTATTTTTTACTTAGAACACTTTGGTTCTTTCTTCAACACTCTTCTTTTTCGTAGTTTCTCTAATCTACCATTTACCATACAACAAATCGCGTCCTGATTTCTTTCTTCTCCCTCTCCATCGCTGCCATTATCGGTCGCCGGCTCCCTTCCATCTTCCGTTTTCCGGTCTTTTAACTTCAGATCATACGGCGCCAGAATTTATGGCGGGATACTCCTCCACTGCTTCTGACAAGAAATCGTCTGATTCGGCCGACGATATACCGATCTTTAATGCTGAAAATTTGCAAAACAACTTGAAGATAATATATTACAGGTTTTTTCGATGCTTCAATCAACTTTACTTTCTTGTTGATACCGATTTGTCTTTTATTCTCTCCTGCATCAAAAGTAGTTGAATCCTATCATTTTTCTTAGAATTGGAATCCTTCCGTGATAGACCTAGATCCTGTCTTTTCTATTTCTATTTTCTTAATTAGCAGCTTATGTAACTGTAGATTTAATTGGTTGACCTAAAATTTTACTGGGTTTTGAGCAATCTCGGGAATGTTTGCATTCAAAATGAGTAGCTACTAAAGGGACCCGATGTGATTTTTGTTGATTATTATGATATTGTTCTTGAGTTTCGTGAATTTAGATCATAAGCGTCTACTATCTTCTGCAGCCGGACGTTTTTGTCTATAATTGGTGGAGTCATTGCTGGAATTTTGGGATTCACTGGCCTGACTGGATTTATATTTTATTTCCTAGTCATGGCAATTACTTCAGTTGCACTTGCAGCTAAGGCTGGGTTTTCCTTTCATTCCTATTTTGAAAGCTGTAACCAGATTCTACTCGATGGCTTTCTGGGAGGACTTATGGTATGCGTCCTCTGCCCTTATTTTTTAGATTGGACAAAGTTGCAAGACACAATAGAGAACGTGGAATAGGATAATTGAATAATTTTATGTACTTGAATGAAACTGGTTTCTTTTGATGTTCTATTTTTATTTATAAGTAATATAAATTTTTACATCTAATGCCTCTAGGGTTTCTAAGTTACGAATCTTTCTTGTTAATTGCCTACATTTGTTCTGTATTTAGAAGAAATTAGTTACAATTGGTACTTTCACCCGCTTTACTCTCCTGCTTTCTACTATTGGAATGTGCAAGTTTGGAATCAAAGGAGAAGATAGGTCACAGTACTATCTTCAATGTTATTGTGCTGGAGGCTAGTTGAGAAAACACAGTAAAACTCCATTTCTTTTAGAAGGTAGTATAACGCAAGAAGAGGAAGGCCCAATTCTAAGTTGAATGTTCTTTTAAACCCCCTTGGGATCCCTTTTAGGGTGATTTCTTATCCTCCTTTGGACAATTTTCACATTTCCTATTAAGGAAAAATATAGTTTGTTTGATCATACTAATAAGGAAAGGAAATAAAAAGAGGTGGGCAAGTTGATTTTAGGAAATGTTGAGGGTTTTCTTTTTTCCTTCCTCTCACTTGCAACAGGATAGAGGTCTCTAGAGCATTGGGATTGGACTCGTTCCAATTCCTACAGAAACTTGGATAGACTGAAAAGTTGAGTTAGATAAATTCCTATGGGGTTTTTTTCAAGATTATGCTAATGAACAGTGATTTAAGAATGTTTCAATGGTATTCTATGATAGAGGTTGTTAATGGGGCAATGTTTCAATTGCTTCAAAGAAAAATCAAAGAAAGGAAGGAGAATTGAACAAGAAAAAGAGTCAAAGTAGAAACAAAATCATTTTTATTTCTATATCTTGCTTCAAATATTCTTTTCCTCGAGATTATTTGAGTTAATTTCCTCCTAATCTTATGTATATTTTATTTATATTGTTTTTGTTTATTTTTTTTATTAACTGTGTGTCGCTTCAATCAGGCAACACCTATTTGTTGCCTCTCACCTTGAGGCCATTAAAAAGTTTGTGGCCTTAGAGTGCGCCTTGCACTTTGAAAACACTGATGGGGTGTATTAGTGCTACTCATATTTGCTTAATGCCTAGCAAGTTTGGGGCTATGTACTTCCAGAATTTAGAGCGTAAACCTGTATGTTGTTTCAACACTAGCCTAGTCATTGAAAATATTTTTAGGGTGCTAGTTAAGAGAGGTGATGGTCTACCTTTTTTGAAGGTCCAATGTCATTCCTTCCAAGAAAAATTAAATGAGATTCTGCAAAGGTAAAAGCTGTAGGGTTTTTCTTCTGTATGGAGAAGTTAGGTTAGCCTTTAGTGGGCAATTTGCATCCTTCATTTTTTCCCATGTTTCGTGTGTCAGTGTGTGAACATGGAGGTAAGATTTAGGCTTCAATGGATATGAGAGCTCAGGGTTTTGAAAGGAATTGGAGACTTCAGGGCAAGGGTGCCTTCAAAAGGCTAATTTCTTTGTTCTTTTTATGAGAGACCAAGAGTTAGATTAGAGTGACTAGGGACTTCTTAGGCTGAGTGTCTCTCTTTTTATGGATGTTGTTTTAAGTCTATTTCTCTACATGGATATTGATTGCAATCGAATCGAAGATTTTTTAGTATAGGTGGGGTGATAAAATCTTCACTTGAGTAGTTTTCAATTTTCTGCTGCTGTTGATAAGAGTTTCTTCTTCTACTTGGAAGAAAAGTGCAAAAGCGATAACCTGTTCAATATTGTCAAAGCTTGTGAGGTCATGTCAGCCCCTAGGCCATAAGGTCAGCTGTAAAAGGGTAGTGTTTGGTCGATTGGAGTCCCTTGTTAGGTCCATTTGGCTCTTTTTGAGGGCTGGATTTTTTGTTGCTTTGTATTTTTTATTTTTTTTCTCAATTAAAGTTGGTATATTTGTCTAAAAGGCTACAAATGTAGTCATATTCTAAGTTGGTGTAAACGTTTGCTTGCTTAAAGATTATAGAGGATTAGGACTTGGCAAACGAGGATTTGGAGTATCTGCTGACTGCTGGAAATTCGAAAGTGGAAGCATTTTTTTTATGGTATAAGAAGTAAATGTGGTATGGATTGCTCTGGATAGTATTTGAAGGAACTCATAAGATGCAGCATGGAAATCAACTGTGTATTTCAAATCCTTGGTGGAAGCGTTAGACAACTCAAAACAAAGGAATGAGAGGAGAATGAAATTTGGGAGGATTTTCTTATTAATTTAGTGGTCAGACCTAATAACAGGGAAGATGTTAATCATCATGGGTTGGCCTAGTGGTAAAAAAGAGACATAATTTCAATAACTAACTAAGATGGCATGAGTTCAATTTATGGTGGCCACCTACCTAGGAATTAGTTTCCTACTAGTTATCTTGACACCCAAATGTCATATAGGGTCAGGTGGGTTGTCCAGTAAGATTAGTCGAGGTGCGCGTAAGCTGGCTCGAACACTCACGGAAATAAAAAAAAATAACAAGAGGAGTTGTTAGGTTTTGGGGTTTCAATTTCAAGGTGTTCTTACTATTTTCTTTTTGTTTCAAGCATATTAATATATTATTGATGTTTCTCAGGTGCTTCCAACCAAATTGCCTAGTTTTTCGGTGAATGTTTCTAAAGTTTGATTTTTTTTTTTCTCTTTTCAAAATTTCATCCTCGTAACATCAGTAAGAGTACAAAAGAAATTCTGAACTTAAGTATCACACCTTTTGAGGATCAATTATCTATTTATGGTCCCTCCTACTTTGGGGTCTGTGGGTTCATCTTTTGGTGGGACTTCTCTTAATGGTCTTGAATGAACTCCAGAATTCTTGAGTTTCAGAAAAGCCCAGATTGATCTCTACAATTTTTTCGTAGAGTCTAGGGGGCTTAAATTTCTTTATGACATTAGAAAATGTTTGTTTCTCAACATCCAGTAGATACTATGATTGGAAGATGTATTATTTGTCTTGTGACGACTTCTTATTTTTATGTGTTTGGTTATCCAACAACCTATTGACACTAACCCTTCGTTCTAATTTTGCAGTCGTTCGTGCTTTTCTGGACGTATCCTTTTATATAACTTTATGGTTTATACAAAGTACTTTTTGCCATTACTTCAAAAAATTTCCAACATTACACTATCGGAACATTCTGAAGATATACTTTTTTTCTTTCTGGAAGAGGTAGTTCTCATTTACATAGCCAAAGGGTATATTGCTCAGTTCATTATATGAAGTATATTACTTCCCTTGCGTATTTCTGTTTCAATTTGTATATTGAATTTGTTTTTCTTGACATGAAAAAGTTTTGCGTACGATATCGTTCATATATTTTGAGGCCAAATGCTGGCAGGAATTGGAAATTCTAGAGGTAGCTGCAGCTCTGTACACTTCGACTCGAGACTGGGAGTTCCAAAGGAGTAAATGAACTTTTGTCCTTCAAAAATGATAACTAGATTGAGTTTTATCTTTTGACCCCTTTCACCTTAATGATAATTGTGTTAAGTTTCTTTATAATCCTTTCATTACTATGTTTAGAATCTGAGAAGAGCGGGGCATTTTCTAGTGACGGGCAGAGATTTTATTTATTCTTTCTAGTTTTACAAGTTCTTGAGCTTTTGTTCTGAACTGATATATTTTAGTTCATCTGTGTTCTTATAAATAGTTCACGGCAATTCAGAACTCACAATGGTAGCTTTCTTGATCGAAGTGATCATTAATAAGTTAGACTCT

mRNA sequence

TATTCATATTACTCTCAATAATCTTTTCTACCATTAGATATATAAATATTATTTTTTACTTAGAACACTTTGGTTCTTTCTTCAACACTCTTCTTTTTCGTAGTTTCTCTAATCTACCATTTACCATACAACAAATCGCGTCCTGATTTCTTTCTTCTCCCTCTCCATCGCTGCCATTATCGGTCGCCGGCTCCCTTCCATCTTCCGTTTTCCGGTCTTTTAACTTCAGATCATACGGCGCCAGAATTTATGGCGGGATACTCCTCCACTGCTTCTGACAAGAAATCGTCTGATTCGGCCGACGATATACCGATCTTTAATGCTGAAAATTTGCAAAACAACTTGAAGATAATATATTACAGCCGGACGTTTTTGTCTATAATTGGTGGAGTCATTGCTGGAATTTTGGGATTCACTGGCCTGACTGGATTTATATTTTATTTCCTAGTCATGGCAATTACTTCAGTTGCACTTGCAGCTAAGGCTGGGTTTTCCTTTCATTCCTATTTTGAAAGCTGTAACCAGATTCTACTCGATGGCTTTCTGGGAGGACTTATGTCGTTCGTGCTTTTCTGGACTTTTGCGTACGATATCGTTCATATATTTTGAGGCCAAATGCTGGCAGGAATTGGAAATTCTAGAGGTAGCTGCAGCTCTGTACACTTCGACTCGAGACTGGGAGTTCCAAAGGAGTAAATGAACTTTTGTCCTTCAAAAATGATAACTAGATTGAGTTTTATCTTTTGACCCCTTTCACCTTAATGATAATTGTGTTAAGTTTCTTTATAATCCTTTCATTACTATGTTTAGAATCTGAGAAGAGCGGGGCATTTTCTAGTGACGGGCAGAGATTTTATTTATTCTTTCTAGTTTTACAAGTTCTTGAGCTTTTGTTCTGAACTGATATATTTTAGTTCATCTGTGTTCTTATAAATAGTTCACGGCAATTCAGAACTCACAATGGTAGCTTTCTTGATCGAAGTGATCATTAATAAGTTAGACTCT

Coding sequence (CDS)

ATGGCGGGATACTCCTCCACTGCTTCTGACAAGAAATCGTCTGATTCGGCCGACGATATACCGATCTTTAATGCTGAAAATTTGCAAAACAACTTGAAGATAATATATTACAGCCGGACGTTTTTGTCTATAATTGGTGGAGTCATTGCTGGAATTTTGGGATTCACTGGCCTGACTGGATTTATATTTTATTTCCTAGTCATGGCAATTACTTCAGTTGCACTTGCAGCTAAGGCTGGGTTTTCCTTTCATTCCTATTTTGAAAGCTGTAACCAGATTCTACTCGATGGCTTTCTGGGAGGACTTATGTCGTTCGTGCTTTTCTGGACTTTTGCGTACGATATCGTTCATATATTTTGA

Protein sequence

MAGYSSTASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILLDGFLGGLMSFVLFWTFAYDIVHIF
Homology
[Close]
BLAST of Cmc02g0038181 vs. NCBI nr
Match: XP_008450632.1 (PREDICTED: ER membrane protein complex subunit 6 [Cucumis melo])

HSP 1 Score: 228.4 bits (581), Expect = 3.2e-56
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0 

Query: 1   MAGYSSTASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG 60
           MAGYSSTASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG
Sbjct: 1   MAGYSSTASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG 60

Query: 61  FIFYFLVMAITSVALAAKAGFSFHSYFESCNQILLDGFLGGLMSFVLFWTFAYDIVHIF 120
           FIFYFLVMAITSVALAAKAGFSFHSYFESCNQILLDGFLGGLMSFVLFWTFAYDIVHIF
Sbjct: 61  FIFYFLVMAITSVALAAKAGFSFHSYFESCNQILLDGFLGGLMSFVLFWTFAYDIVHIF 119

[Close]
BLAST of Cmc02g0038181 vs. NCBI nr
Match: XP_004135605.1 (ER membrane protein complex subunit 6 [Cucumis sativus] >KGN66513.2 hypothetical protein Csa_007044 [Cucumis sativus])

HSP 1 Score: 221.9 bits (564), Expect = 3.0e-54
Identity = 115/119 (96.64%), Postives = 116/119 (97.48%), Query Frame = 0 

Query: 1   MAGYSSTASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG 60
           MAGYSSTASDKKSSD ADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAG+LGFTGLTG
Sbjct: 1   MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTG 60

Query: 61  FIFYFLVMAITSVALAAKAGFSFHSYFESCNQILLDGFLGGLMSFVLFWTFAYDIVHIF 120
           FIFYFLVMAITSVALAAKAGFSFHSYFESCNQIL DGFL GLMSFVLFWTFAYDIVHIF
Sbjct: 61  FIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLSGLMSFVLFWTFAYDIVHIF 119

[Close]
BLAST of Cmc02g0038181 vs. NCBI nr
Match: XP_022137968.1 (ER membrane protein complex subunit 6 [Momordica charantia] >XP_022137969.1 ER membrane protein complex subunit 6 [Momordica charantia])

HSP 1 Score: 209.1 bits (531), Expect = 2.0e-50
Identity = 108/119 (90.76%), Postives = 114/119 (95.80%), Query Frame = 0 

Query: 1   MAGYSSTASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG 60
           MAGYSS AS+KKS+++ADD+PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG
Sbjct: 1   MAGYSSAASEKKSTEAADDVPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG 60

Query: 61  FIFYFLVMAITSVALAAKAGFSFHSYFESCNQILLDGFLGGLMSFVLFWTFAYDIVHIF 120
           FI YFLVMAITS+ LAAKAGFSFHSYFES NQILLDGFL GLMSFVLFWTFAYDIVHIF
Sbjct: 61  FILYFLVMAITSLGLAAKAGFSFHSYFESWNQILLDGFLSGLMSFVLFWTFAYDIVHIF 119

[Close]
BLAST of Cmc02g0038181 vs. NCBI nr
Match: KAG6597582.1 (ER membrane protein complex subunit 6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 209.1 bits (531), Expect = 2.0e-50
Identity = 109/119 (91.60%), Postives = 112/119 (94.12%), Query Frame = 0 

Query: 1   MAGYSSTASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG 60
           MAGYSS AS+KKSSD+ DDIPI NAENLQNNLKIIYYSRTFLSIIGGVIAGILGFT LTG
Sbjct: 49  MAGYSSNASEKKSSDAVDDIPILNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTSLTG 108

Query: 61  FIFYFLVMAITSVALAAKAGFSFHSYFESCNQILLDGFLGGLMSFVLFWTFAYDIVHIF 120
           FIFYFLVMAITS+ LAAKAGFSFHSYFES NQILLDGFL GLMSFVLFWTFAYDIVHIF
Sbjct: 109 FIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLSGLMSFVLFWTFAYDIVHIF 167

[Close]
BLAST of Cmc02g0038181 vs. NCBI nr
Match: XP_022937062.1 (ER membrane protein complex subunit 6 [Cucurbita moschata] >XP_022937070.1 ER membrane protein complex subunit 6 [Cucurbita moschata])

HSP 1 Score: 209.1 bits (531), Expect = 2.0e-50
Identity = 109/119 (91.60%), Postives = 112/119 (94.12%), Query Frame = 0 

Query: 1   MAGYSSTASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG 60
           MAGYSS AS+KKSSD+ DDIPI NAENLQNNLKIIYYSRTFLSIIGGVIAGILGFT LTG
Sbjct: 1   MAGYSSNASEKKSSDAVDDIPILNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTSLTG 60

Query: 61  FIFYFLVMAITSVALAAKAGFSFHSYFESCNQILLDGFLGGLMSFVLFWTFAYDIVHIF 120
           FIFYFLVMAITS+ LAAKAGFSFHSYFES NQILLDGFL GLMSFVLFWTFAYDIVHIF
Sbjct: 61  FIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLSGLMSFVLFWTFAYDIVHIF 119

[Close]
BLAST of Cmc02g0038181 vs. ExPASy Swiss-Prot
Match: Q9BV81 (ER membrane protein complex subunit 6 OS=Homo sapiens OX=9606 GN=EMC6 PE=1 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 7.6e-16
Identity = 42/99 (42.42%), Postives = 61/99 (61.62%), Query Frame = 0 

Query: 21  PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSVALAAKAG 80
           P  +   ++ N  ++ Y RT +S + G  AGILG TGL GFIFY L   + S+ L  KAG
Sbjct: 12  PFISEAAVRGNAAVLDYCRTSVSALSGATAGILGLTGLYGFIFYLLASVLLSLLLILKAG 71

Query: 81  FSFHSYFESCNQILLDGFLGGLMSFVLFWTFAYDIVHIF 120
             ++ YF+S   +   G +GGL ++VLFWTF Y +VH++
Sbjct: 72  RRWNKYFKSRRPLFTGGLIGGLFTYVLFWTFLYGMVHVY 110

[Close]
BLAST of Cmc02g0038181 vs. ExPASy Swiss-Prot
Match: Q9CQW0 (ER membrane protein complex subunit 6 OS=Mus musculus OX=10090 GN=Emc6 PE=1 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 7.6e-16
Identity = 42/99 (42.42%), Postives = 61/99 (61.62%), Query Frame = 0 

Query: 21  PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSVALAAKAG 80
           P  +   ++ N  ++ Y RT +S + G  AGILG TGL GFIFY L   + S+ L  KAG
Sbjct: 12  PFISEAAVRGNAAVLDYCRTSVSALSGATAGILGLTGLYGFIFYLLASVLLSLLLILKAG 71

Query: 81  FSFHSYFESCNQILLDGFLGGLMSFVLFWTFAYDIVHIF 120
             ++ YF+S   +   G +GGL ++VLFWTF Y +VH++
Sbjct: 72  RRWNKYFKSRRPLFTGGLIGGLFTYVLFWTFLYGMVHVY 110

[Close]
BLAST of Cmc02g0038181 vs. ExPASy Swiss-Prot
Match: Q6GLC5 (ER membrane protein complex subunit 6 OS=Xenopus tropicalis OX=8364 GN=emc6 PE=3 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 4.9e-15
Identity = 40/92 (43.48%), Postives = 59/92 (64.13%), Query Frame = 0 

Query: 28  LQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYF 87
           ++ N  ++ Y RT +S + G  AGILG T L GFIFYFL   + S+ L  K+G  ++ YF
Sbjct: 19  VRGNAAVLDYCRTSVSALSGATAGILGLTALYGFIFYFLASFLLSLLLVLKSGRKWNKYF 78

Query: 88  ESCNQILLDGFLGGLMSFVLFWTFAYDIVHIF 120
           +S   +   G +GGL ++VLFWTF Y +VH++
Sbjct: 79  KSRKPLFTGGLIGGLFTYVLFWTFLYGMVHVY 110

[Close]
BLAST of Cmc02g0038181 vs. ExPASy Swiss-Prot
Match: Q68EU8 (ER membrane protein complex subunit 6 OS=Xenopus laevis OX=8355 GN=emc6 PE=3 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 6.4e-15
Identity = 40/92 (43.48%), Postives = 59/92 (64.13%), Query Frame = 0 

Query: 28  LQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYF 87
           ++ N  ++ Y RT +S + G  AGILG T L GFIFYFL   + S+ L  K+G  ++ YF
Sbjct: 19  VRGNAAVLDYCRTSVSALSGATAGILGLTSLYGFIFYFLASFLLSLLLVLKSGRKWNKYF 78

Query: 88  ESCNQILLDGFLGGLMSFVLFWTFAYDIVHIF 120
           +S   +   G +GGL ++VLFWTF Y +VH++
Sbjct: 79  KSRKPLFTGGLVGGLFTYVLFWTFLYGMVHVY 110

[Close]
BLAST of Cmc02g0038181 vs. ExPASy Swiss-Prot
Match: Q3ZCG8 (ER membrane protein complex subunit 6 OS=Bos taurus OX=9913 GN=EMC6 PE=3 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 8.4e-15
Identity = 41/99 (41.41%), Postives = 60/99 (60.61%), Query Frame = 0 

Query: 21  PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSVALAAKAG 80
           P  +   ++ N  ++ Y RT +S + G  AGILG TGL GFIFY L   + S+ L  KA 
Sbjct: 12  PFISEAAVRGNAAVLDYCRTSVSALSGATAGILGLTGLYGFIFYLLASILLSLLLILKAR 71

Query: 81  FSFHSYFESCNQILLDGFLGGLMSFVLFWTFAYDIVHIF 120
             ++ YF+S   +   G +GGL ++VLFWTF Y +VH++
Sbjct: 72  RRWNKYFKSRRPLFTGGLIGGLFTYVLFWTFLYGMVHVY 110

[Close]
BLAST of Cmc02g0038181 vs. ExPASy TrEMBL
Match: A0A1S3BQB0 (ER membrane protein complex subunit 6 OS=Cucumis melo OX=3656 GN=LOC103492162 PE=3 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 1.6e-56
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0 

Query: 1   MAGYSSTASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG 60
           MAGYSSTASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG
Sbjct: 1   MAGYSSTASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG 60

Query: 61  FIFYFLVMAITSVALAAKAGFSFHSYFESCNQILLDGFLGGLMSFVLFWTFAYDIVHIF 120
           FIFYFLVMAITSVALAAKAGFSFHSYFESCNQILLDGFLGGLMSFVLFWTFAYDIVHIF
Sbjct: 61  FIFYFLVMAITSVALAAKAGFSFHSYFESCNQILLDGFLGGLMSFVLFWTFAYDIVHIF 119

[Close]
BLAST of Cmc02g0038181 vs. ExPASy TrEMBL
Match: A0A6J1CBS9 (ER membrane protein complex subunit 6 OS=Momordica charantia OX=3673 GN=LOC111009251 PE=3 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 9.8e-51
Identity = 108/119 (90.76%), Postives = 114/119 (95.80%), Query Frame = 0 

Query: 1   MAGYSSTASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG 60
           MAGYSS AS+KKS+++ADD+PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG
Sbjct: 1   MAGYSSAASEKKSTEAADDVPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG 60

Query: 61  FIFYFLVMAITSVALAAKAGFSFHSYFESCNQILLDGFLGGLMSFVLFWTFAYDIVHIF 120
           FI YFLVMAITS+ LAAKAGFSFHSYFES NQILLDGFL GLMSFVLFWTFAYDIVHIF
Sbjct: 61  FILYFLVMAITSLGLAAKAGFSFHSYFESWNQILLDGFLSGLMSFVLFWTFAYDIVHIF 119

[Close]
BLAST of Cmc02g0038181 vs. ExPASy TrEMBL
Match: A0A6J1FFH8 (ER membrane protein complex subunit 6 OS=Cucurbita moschata OX=3662 GN=LOC111443473 PE=3 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 9.8e-51
Identity = 109/119 (91.60%), Postives = 112/119 (94.12%), Query Frame = 0 

Query: 1   MAGYSSTASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG 60
           MAGYSS AS+KKSSD+ DDIPI NAENLQNNLKIIYYSRTFLSIIGGVIAGILGFT LTG
Sbjct: 1   MAGYSSNASEKKSSDAVDDIPILNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTSLTG 60

Query: 61  FIFYFLVMAITSVALAAKAGFSFHSYFESCNQILLDGFLGGLMSFVLFWTFAYDIVHIF 120
           FIFYFLVMAITS+ LAAKAGFSFHSYFES NQILLDGFL GLMSFVLFWTFAYDIVHIF
Sbjct: 61  FIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLSGLMSFVLFWTFAYDIVHIF 119

[Close]
BLAST of Cmc02g0038181 vs. ExPASy TrEMBL
Match: A0A6J1I7D9 (ER membrane protein complex subunit 6 OS=Cucurbita maxima OX=3661 GN=LOC111470685 PE=3 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.7e-50
Identity = 108/119 (90.76%), Postives = 112/119 (94.12%), Query Frame = 0 

Query: 1   MAGYSSTASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG 60
           MAGYSS AS+KKSSD+ DD+PI NAENLQNNLKIIYYSRTFLSIIGGVIAGILGFT LTG
Sbjct: 1   MAGYSSNASEKKSSDAVDDLPILNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTSLTG 60

Query: 61  FIFYFLVMAITSVALAAKAGFSFHSYFESCNQILLDGFLGGLMSFVLFWTFAYDIVHIF 120
           FIFYFLVMAITS+ LAAKAGFSFHSYFES NQILLDGFL GLMSFVLFWTFAYDIVHIF
Sbjct: 61  FIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLSGLMSFVLFWTFAYDIVHIF 119

[Close]
BLAST of Cmc02g0038181 vs. ExPASy TrEMBL
Match: A0A0A0LZ06 (ER membrane protein complex subunit 6 OS=Cucumis sativus OX=3659 GN=Csa_1G569390 PE=3 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 3.2e-49
Identity = 106/110 (96.36%), Postives = 107/110 (97.27%), Query Frame = 0 

Query: 1   MAGYSSTASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG 60
           MAGYSSTASDKKSSD ADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAG+LGFTGLTG
Sbjct: 1   MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTG 60

Query: 61  FIFYFLVMAITSVALAAKAGFSFHSYFESCNQILLDGFLGGLMSFVLFWT 111
           FIFYFLVMAITSVALAAKAGFSFHSYFESCNQIL DGFL GLMSFVLFWT
Sbjct: 61  FIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLSGLMSFVLFWT 110

[Close]
BLAST of Cmc02g0038181 vs. TAIR 10
Match: AT5G49540.1 (Rab5-interacting family protein )

HSP 1 Score: 159.1 bits (401), Expect = 2.2e-39
Identity = 81/112 (72.32%), Postives = 94/112 (83.93%), Query Frame = 0 

Query: 8   ASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLV 67
           +S+K+S D   DIP F+AENLQNNLK+I  SRTFLSII GV+AGI+GF GL GF+FYF+V
Sbjct: 3   SSEKRSKDIMSDIPTFSAENLQNNLKVIQNSRTFLSIIAGVLAGIIGFNGLIGFVFYFVV 62

Query: 68  MAITSVALAAKAGFSFHSYFESCNQILLDGFLGGLMSFVLFWTFAYDIVHIF 120
           M ITSV L AKAGFS   YF+S N++L DGFLGGLMSFVLFWTFAYD+VHIF
Sbjct: 63  MLITSVGLMAKAGFSADLYFDSWNRVLFDGFLGGLMSFVLFWTFAYDLVHIF 114

The following BLAST results are available for this feature:
BLAST of Cmc02g0038181 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008450632.13.2e-56100.00PREDICTED: ER membrane protein complex subunit 6 [Cucumis melo][more]
XP_004135605.13.0e-5496.64ER membrane protein complex subunit 6 [Cucumis sativus] >KGN66513.2 hypothetical... [more]
XP_022137968.12.0e-5090.76ER membrane protein complex subunit 6 [Momordica charantia] >XP_022137969.1 ER m... [more]
KAG6597582.12.0e-5091.60ER membrane protein complex subunit 6, partial [Cucurbita argyrosperma subsp. so... [more]
XP_022937062.12.0e-5091.60ER membrane protein complex subunit 6 [Cucurbita moschata] >XP_022937070.1 ER me... [more]
BLAST of Cmc02g0038181 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9BV817.6e-1642.42ER membrane protein complex subunit 6 OS=Homo sapiens OX=9606 GN=EMC6 PE=1 SV=1[more]
Q9CQW07.6e-1642.42ER membrane protein complex subunit 6 OS=Mus musculus OX=10090 GN=Emc6 PE=1 SV=1[more]
Q6GLC54.9e-1543.48ER membrane protein complex subunit 6 OS=Xenopus tropicalis OX=8364 GN=emc6 PE=3... [more]
Q68EU86.4e-1543.48ER membrane protein complex subunit 6 OS=Xenopus laevis OX=8355 GN=emc6 PE=3 SV=... [more]
Q3ZCG88.4e-1541.41ER membrane protein complex subunit 6 OS=Bos taurus OX=9913 GN=EMC6 PE=3 SV=1[more]
BLAST of Cmc02g0038181 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BQB01.6e-56100.00ER membrane protein complex subunit 6 OS=Cucumis melo OX=3656 GN=LOC103492162 PE... [more]
A0A6J1CBS99.8e-5190.76ER membrane protein complex subunit 6 OS=Momordica charantia OX=3673 GN=LOC11100... [more]
A0A6J1FFH89.8e-5191.60ER membrane protein complex subunit 6 OS=Cucurbita moschata OX=3662 GN=LOC111443... [more]
A0A6J1I7D91.7e-5090.76ER membrane protein complex subunit 6 OS=Cucurbita maxima OX=3661 GN=LOC11147068... [more]
A0A0A0LZ063.2e-4996.36ER membrane protein complex subunit 6 OS=Cucumis sativus OX=3659 GN=Csa_1G569390... [more]
BLAST of Cmc02g0038181 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G49540.12.2e-3972.32Rab5-interacting family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029008Rab5-interacting protein familyPFAMPF07019Rab5ipcoord: 35..113
e-value: 1.8E-18
score: 66.9
IPR008504ER membrane protein complex subunit 6PANTHERPTHR20994UNCHARACTERIZEDcoord: 8..119

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc02g0038181.1Cmc02g0038181.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000045 autophagosome assembly
cellular_component GO:0072546 EMC complex
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0016021 integral component of membrane