Cmc02g0038031 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc02g0038031
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	EF-hand domain-containing protein
Location	CMiso1.1chr02: 609669 .. 610892 (+)
RNA-Seq Expression	Cmc02g0038031
Synteny	Cmc02g0038031

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTCTTGTCAGCGTCGGCTCTCTTCCTGAGCTCTTCCATGATGGGGTTCTCTGGGTTAATTTCCATGGTCTTCTTGCTCGACATGTAACCGGCCATGCTGTTGTCCTTCAATGCCTGCGCTTTCATGATTCTTTCCATGTTGGCTGTCCATCCATATTCACCAGTTACCAAACAGCATGGAGAATCCACAACACGGTCTGAAACAACAACCTTCTCCACTTTGTCACCCAAAACATCCTTGATCACCTTGCATAGCCCCTCGAACTTCTCCACCAAAGCTTCTTTCTTCTTCTTCTCATCTTCACTCTCGTCAAGTTTCAGACCTTCCTTGGTTGCTGAAACAAGCTTCTTACCTTCAAACTCCTTCAACTGACCGACTGCATACTCATCAATCGCATCAACCATGAACAAAACTTCGTAACCCTTCTTCTTGAGCTTCTCAAGGAAAGGAGAGTTTTCTACTGCTTTCTTGCTTTCACCAGTGATGTAAAAGATATCGTTCTGACCTTCCTTCATTCTGGTCACGTAATCCTTCAAGCTTGTCAACTCATCGCCACTCTTGGTAGAGTGGAAGCGGAGAAGTTCAGCAATCTTAGGCCTGTTCTGGGAATCCTCGTGGATACCAAGCTTCAAGTTCTTGGAGAAGGCCTCGTAGAACTTGTTGTAATCTTCCTTGTTCTCGGCAATCTCAAAGAAGAGCTCAAGGCACTTCTTGACCAAGTTCTTTCGGATGACCTTCAAGATCTTGTTCTGCTGCAACATTTCTCTAGAAATATTCAGAGGGAGATCCTCGGAGTCGACAATACCCTTAACAAAGCCAAGGTATTCAGGAATCAATTCCTCACAGTTGTCCATGATGAAGACACGGCGAACATACAACTTGATGTTGTTTGGCTTCTTCTTTGTGTCAAACAGATCAAAAGGAGCCCTCTTGGGAACAAAGAGGATGGCCTTGAATTCCAATTGACCTTCAACGGAGAAGTGCTTTACGGCCAAATGCTCTTCCCAGTCATTGGTAAGGCTCTTGTAGAAAGCAGCATATTCTTCCTTTGTAATCTCTTCTGGCTTCCTCATCCAGATAGGCTTCTGCTTGTTCACCAACGACCACTCGTGTGAAACCTCCTTAATCTTTTTCTTCTTCTTTTCGTCCTTCTCCTTCTCCTCATCAACTTCCTCAACCTTTCCTTCCTCGTCCTTCTTCTCCTCCTCATCTTCGTCATCAGA

mRNA sequence

GTTCTTGTCAGCGTCGGCTCTCTTCCTGAGCTCTTCCATGATGGGGTTCTCTGGGTTAATTTCCATGGTCTTCTTGCTCGACATGTAACCGGCCATGCTGTTGTCCTTCAATGCCTGCGCTTTCATGATTCTTTCCATGTTGGCTGTCCATCCATATTCACCAGTTACCAAACAGCATGGAGAATCCACAACACGGTCTGAAACAACAACCTTCTCCACTTTGTCACCCAAAACATCCTTGATCACCTTGCATAGCCCCTCGAACTTCTCCACCAAAGCTTCTTTCTTCTTCTTCTCATCTTCACTCTCGTCAAGTTTCAGACCTTCCTTGGTTGCTGAAACAAGCTTCTTACCTTCAAACTCCTTCAACTGACCGACTGCATACTCATCAATCGCATCAACCATGAACAAAACTTCGTAACCCTTCTTCTTGAGCTTCTCAAGGAAAGGAGAGTTTTCTACTGCTTTCTTGCTTTCACCAGTGATGTAAAAGATATCGTTCTGACCTTCCTTCATTCTGGTCACGTAATCCTTCAAGCTTGTCAACTCATCGCCACTCTTGGTAGAGTGGAAGCGGAGAAGTTCAGCAATCTTAGGCCTGTTCTGGGAATCCTCGTGGATACCAAGCTTCAAGTTCTTGGAGAAGGCCTCGTAGAACTTGTTGTAATCTTCCTTGTTCTCGGCAATCTCAAAGAAGAGCTCAAGGCACTTCTTGACCAAGTTCTTTCGGATGACCTTCAAGATCTTGTTCTGCTGCAACATTTCTCTAGAAATATTCAGAGGGAGATCCTCGGAGTCGACAATACCCTTAACAAAGCCAAGGTATTCAGGAATCAATTCCTCACAGTTGTCCATGATGAAGACACGGCGAACATACAACTTGATGTTGTTTGGCTTCTTCTTTGTGTCAAACAGATCAAAAGGAGCCCTCTTGGGAACAAAGAGGATGGCCTTGAATTCCAATTGACCTTCAACGGAGAAGTGCTTTACGGCCAAATGCTCTTCCCAGTCATTGGTAAGGCTCTTGTAGAAAGCAGCATATTCTTCCTTTGTAATCTCTTCTGGCTTCCTCATCCAGATAGGCTTCTGCTTGTTCACCAACGACCACTCGTGTGAAACCTCCTTAATCTTTTTCTTCTTCTTTTCGTCCTTCTCCTTCTCCTCATCAACTTCCTCAACCTTTCCTTCCTCGTCCTTCTTCTCCTCCTCATCTTCGTCATCAGA

Coding sequence (CDS)

ATGCTGTTGTCCTTCAATGCCTGCGCTTTCATGATTCTTTCCATGTTGGCTGTCCATCCATATTCACCAGTTACCAAACAGCATGGAGAATCCACAACACGGTCTGAAACAACAACCTTCTCCACTTTGTCACCCAAAACATCCTTGATCACCTTGCATAGCCCCTCGAACTTCTCCACCAAAGCTTCTTTCTTCTTCTTCTCATCTTCACTCTCGTCAAGTTTCAGACCTTCCTTGGTTGCTGAAACAAGCTTCTTACCTTCAAACTCCTTCAACTGA

Protein sequence

MLLSFNACAFMILSMLAVHPYSPVTKQHGESTTRSETTTFSTLSPKTSLITLHSPSNFSTKASFFFFSSSLSSSFRPSLVAETSFLPSNSFN

Homology

[Close]

BLAST of Cmc02g0038031 vs. NCBI nr
Match: KVE05414.1 (hypothetical protein Ccrd_024082 [Cynara cardunculus var. scolymus])

HSP 1 Score: 138.7 bits (348), Expect = 2.6e-29
Identity = 77/92 (83.70%), Postives = 80/92 (86.96%), Query Frame = 0


Query: 1   MLLSFNACAFMILSMLAVHPYSPVTKQHGESTTRSETTTFSTLSPKTSLITLHSPSNFST 60
           ML S  ACAFMI SM AVHPYSPVT+QHGESTTRS+TTTFSTLSP TSLITLH PSNFS 
Sbjct: 116 MLASRKACAFMIRSMFAVHPYSPVTRQHGESTTRSDTTTFSTLSPNTSLITLHRPSNFSF 175

Query: 61  KASFFFFSSSLSSSFRPSLVAETSFLPSNSFN 93
           K S F FSSS+SSSFRPSLVAETSF PSNSFN
Sbjct: 176 KDSCFLFSSSVSSSFRPSLVAETSFFPSNSFN 207

[Close]

BLAST of Cmc02g0038031 vs. NCBI nr
Match: GAV59646.1 (hypothetical protein CFOL_v3_03177 [Cephalotus follicularis])

HSP 1 Score: 134.0 bits (336), Expect = 6.4e-28
Identity = 75/92 (81.52%), Postives = 81/92 (88.04%), Query Frame = 0


Query: 1   MLLSFNACAFMILSMLAVHPYSPVTKQHGESTTRSETTTFSTLSPKTSLITLHSPSNFST 60
           MLLS  ACAFMILSMLAVHPYSPVTKQ GESTTRSETTTFS LSP TSLITL  PSN++ 
Sbjct: 86  MLLSLKACAFMILSMLAVHPYSPVTKQQGESTTRSETTTFSILSPNTSLITLQRPSNWAF 145

Query: 61  KASFFFFSSSLSSSFRPSLVAETSFLPSNSFN 93
            +S FFFSSS+SSSFRPSLVA+TSFLPSNS +
Sbjct: 146 NSSAFFFSSSVSSSFRPSLVADTSFLPSNSLS 177

[Close]

BLAST of Cmc02g0038031 vs. NCBI nr
Match: RID45918.1 (hypothetical protein BRARA_I02612 [Brassica rapa])

HSP 1 Score: 126.3 bits (316), Expect = 1.3e-25
Identity = 69/82 (84.15%), Postives = 74/82 (90.24%), Query Frame = 0


Query: 11 MILSMLAVHPYSPVTKQHGESTTRSETTTFSTLSPKTSLITLHSPSNFSTKASFFFFSSS 70
          MILSM AVHPYSPVT+QHGESTTRSET TFSTLSP+TSLITL SPSNFS  +SFFFFSSS
Sbjct: 1  MILSMFAVHPYSPVTRQHGESTTRSETITFSTLSPRTSLITLQSPSNFSFSSSFFFFSSS 60

Query: 71 LSSSFRPSLVAETSFLPSNSFN 93
           SSSFRPSL+AETSF PSNS +
Sbjct: 61 DSSSFRPSLIAETSFFPSNSLS 82

[Close]

BLAST of Cmc02g0038031 vs. NCBI nr
Match: TYZ63420.1 (hypothetical protein PybrP1_008369 [Pythium brassicum])

HSP 1 Score: 90.5 bits (223), Expect = 8.1e-15
Identity = 56/92 (60.87%), Postives = 67/92 (72.83%), Query Frame = 0


Query: 1   MLLSFNACAFMILSMLAVHPYSPVTKQHGESTTRSETTTFSTLSPKTSLITLHSPSNFST 60
           +LLS +ACAFM+ SM A  PYSPVT  HG+ST R E +TFSTLS  TSLI+LH P+  + 
Sbjct: 20  VLLSRSACAFMMRSMFADQPYSPVTSTHGDSTMRFEISTFSTLSSSTSLISLHRPAVAAF 79

Query: 61  KASFFFFSSSLSSSFRPSLVAETSFLPSNSFN 93
            +S  FFSSS+SS  RPS VA  SFLPS SF+
Sbjct: 80  ASSNVFFSSSVSSILRPSFVALISFLPSYSFS 111

[Close]

BLAST of Cmc02g0038031 vs. NCBI nr
Match: KAF6364784.1 (hypothetical protein mRhiFer1_009893 [Rhinolophus ferrumequinum])

HSP 1 Score: 62.0 bits (149), Expect = 3.1e-06
Identity = 41/76 (53.95%), Postives = 48/76 (63.16%), Query Frame = 0


Query: 11 MILSMLAVHPYSPVTKQHGESTTRSETTTFSTLSPKTSLITLHSPSNFSTKASFFFFSSS 70
          MILSM AV PY  VT Q G+ T R +TTTFST   + S + L   SNF   +S FFFSSS
Sbjct: 1  MILSMFAVQPYVLVTMQQGDVTNRFDTTTFSTFFSRMSFMILQRFSNFVFFSSCFFFSSS 60

Query: 71 LSSSFRPSLVAETSFL 87
           S S +PSLV +T  L
Sbjct: 61 SSGSSKPSLVTDTKVL 76

[Close]

BLAST of Cmc02g0038031 vs. ExPASy TrEMBL
Match: A0A124P607 (EF-hand domain-containing protein OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_024082 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.3e-29
Identity = 77/92 (83.70%), Postives = 80/92 (86.96%), Query Frame = 0


Query: 1   MLLSFNACAFMILSMLAVHPYSPVTKQHGESTTRSETTTFSTLSPKTSLITLHSPSNFST 60
           ML S  ACAFMI SM AVHPYSPVT+QHGESTTRS+TTTFSTLSP TSLITLH PSNFS 
Sbjct: 116 MLASRKACAFMIRSMFAVHPYSPVTRQHGESTTRSDTTTFSTLSPNTSLITLHRPSNFSF 175

Query: 61  KASFFFFSSSLSSSFRPSLVAETSFLPSNSFN 93
           K S F FSSS+SSSFRPSLVAETSF PSNSFN
Sbjct: 176 KDSCFLFSSSVSSSFRPSLVAETSFFPSNSFN 207

[Close]

BLAST of Cmc02g0038031 vs. ExPASy TrEMBL
Match: A0A1Q3AV70 (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_03177 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 3.1e-28
Identity = 75/92 (81.52%), Postives = 81/92 (88.04%), Query Frame = 0


Query: 1   MLLSFNACAFMILSMLAVHPYSPVTKQHGESTTRSETTTFSTLSPKTSLITLHSPSNFST 60
           MLLS  ACAFMILSMLAVHPYSPVTKQ GESTTRSETTTFS LSP TSLITL  PSN++ 
Sbjct: 86  MLLSLKACAFMILSMLAVHPYSPVTKQQGESTTRSETTTFSILSPNTSLITLQRPSNWAF 145

Query: 61  KASFFFFSSSLSSSFRPSLVAETSFLPSNSFN 93
            +S FFFSSS+SSSFRPSLVA+TSFLPSNS +
Sbjct: 146 NSSAFFFSSSVSSSFRPSLVADTSFLPSNSLS 177

[Close]

BLAST of Cmc02g0038031 vs. ExPASy TrEMBL
Match: A0A0E0ETB8 (Uncharacterized protein OS=Oryza meridionalis OX=40149 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 3.4e-27
Identity = 76/92 (82.61%), Postives = 79/92 (85.87%), Query Frame = 0


Query: 1  MLLSFNACAFMILSMLAVHPYSPVTKQHGESTTRSETTTFSTLSPKTSLITLHSPSNFST 60
          ML S  A AFMILSMLAV PYSPVT+Q GESTTRSETTTFSTLSP TSLITLH PSNFS 
Sbjct: 1  MLESLRAWAFMILSMLAVQPYSPVTRQQGESTTRSETTTFSTLSPSTSLITLHRPSNFSL 60

Query: 61 KASFFFFSSSLSSSFRPSLVAETSFLPSNSFN 93
           +S  FFSSSLSSSFRPSLVAETSFLPSNS +
Sbjct: 61 SSSCRFFSSSLSSSFRPSLVAETSFLPSNSLS 92

[Close]

BLAST of Cmc02g0038031 vs. ExPASy TrEMBL
Match: A0A397XZE7 (Uncharacterized protein OS=Brassica campestris OX=3711 GN=BRARA_I02612 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 6.5e-26
Identity = 69/82 (84.15%), Postives = 74/82 (90.24%), Query Frame = 0


Query: 11 MILSMLAVHPYSPVTKQHGESTTRSETTTFSTLSPKTSLITLHSPSNFSTKASFFFFSSS 70
          MILSM AVHPYSPVT+QHGESTTRSET TFSTLSP+TSLITL SPSNFS  +SFFFFSSS
Sbjct: 1  MILSMFAVHPYSPVTRQHGESTTRSETITFSTLSPRTSLITLQSPSNFSFSSSFFFFSSS 60

Query: 71 LSSSFRPSLVAETSFLPSNSFN 93
           SSSFRPSL+AETSF PSNS +
Sbjct: 61 DSSSFRPSLIAETSFFPSNSLS 82

[Close]

BLAST of Cmc02g0038031 vs. ExPASy TrEMBL
Match: A0A7C8Z274 (Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 4.5e-19
Identity = 65/83 (78.31%), Postives = 68/83 (81.93%), Query Frame = 0


Query: 11 MILSMLAVHPYSPVTKQHGESTTRSETTTFSTLSPKTSLITLHSPSNFSTKASFFFFSSS 70
          MILSMLAVHPYSPVTKQHGEST  SETTTFSTLSPK SLITL   SN    +SFFFFSSS
Sbjct: 1  MILSMLAVHPYSPVTKQHGESTILSETTTFSTLSPKISLITLQRFSNDFFFSSFFFFSSS 60

Query: 71 L-SSSFRPSLVAETSFLPSNSFN 93
          + SSS  PSLVAETSFLPS S +
Sbjct: 61 VSSSSLSPSLVAETSFLPSYSLS 83

The following BLAST results are available for this feature:

BLAST of Cmc02g0038031 vs. NCBI nr


Match Name	E-value	Identity	Description
KVE05414.1	2.6e-29	83.70	hypothetical protein Ccrd_024082 [Cynara cardunculus var. scolymus]	[more]
GAV59646.1	6.4e-28	81.52	hypothetical protein CFOL_v3_03177 [Cephalotus follicularis]	[more]
RID45918.1	1.3e-25	84.15	hypothetical protein BRARA_I02612 [Brassica rapa]	[more]
TYZ63420.1	8.1e-15	60.87	hypothetical protein PybrP1_008369 [Pythium brassicum]	[more]
KAF6364784.1	3.1e-06	53.95	hypothetical protein mRhiFer1_009893 [Rhinolophus ferrumequinum]	[more]

BLAST of Cmc02g0038031 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc02g0038031 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A124P607	1.3e-29	83.70	EF-hand domain-containing protein OS=Cynara cardunculus var. scolymus OX=59895 G...	[more]
A0A1Q3AV70	3.1e-28	81.52	Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_03177 PE=4...	[more]
A0A0E0ETB8	3.4e-27	82.61	Uncharacterized protein OS=Oryza meridionalis OX=40149 PE=4 SV=1	[more]
A0A397XZE7	6.5e-26	84.15	Uncharacterized protein OS=Brassica campestris OX=3711 GN=BRARA_I02612 PE=4 SV=1	[more]
A0A7C8Z274	4.5e-19	78.31	Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1	[more]

BLAST of Cmc02g0038031 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc02g0038031.1	Cmc02g0038031.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019722	calcium-mediated signaling
cellular_component	GO:0016020	membrane
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0019900	kinase binding