Cmc02g0037951 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc02g0037951
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	60S ribosomal protein L18
Location	CMiso1.1chr02: 597078 .. 597964 (-)
RNA-Seq Expression	Cmc02g0037951
Synteny	Cmc02g0037951

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTACCGCTTTCTTGTTCGTCGAACTGGAAGCAATTTCAATGCTGTGATTCTCAAGCGCTTGTTTATGAGCAAGGTTAACAAGCCTCCACTTTCCCTCTCTCGGCTTATCCAGTTCATGAAAGGAAAGGTTGGTCAAATCATGTAGTATTCTAATTTTATTTTATTTTTTTGTATGGTTAAAAGATATCTCAGACTTTGTACGTTCATGTGTTAATATAATAGGAAAGTAAGATTGCTGTCGTTGTTGGGACTATTACCGATGATATTCGAGTCTATGAAGTTCCAGCATTGAAAGTTGCAGCTTTGAGGTTCACTGAGACAGCAAGGGCAAGGATCGAAAAGGCTGGTGGGGAATGTTTGACATTTGACCAGCTTGCTTTGAGGGCTCCTCTGGGTCAGAACACGGTATGTTTTTCATTTCTTTTCAGAATTTGCTGGATGAATTTTTCATTGTGAAGTCATTATTTAGTTCATTTGCATTCTTAACTTGCTGCTTCACATTGGTCAAGATTTGGTAGTTATTTAGGGGTTTAATCATCACTCGGCTTCTTCTGCAGGTTCTTCTTAGAGGTCCTAAGAATTCTCGAGAGGCAGTGAAGCATTTCGGTCCAGCACCTGGTGTGCCACACAGCCATTCCAAGCCATATGTGAGGTCGAAGGGAAGGAAGTTTGAGAGGGCTAGAGGAAAGAGAAACAGCAGGGGATATAGGGTTTGATTTGATCTTTTACTTTTTTCCAAGCCTAATTCAATGCAAGTGTGTTATTTCGAAATTCAATATCCAAATTTTGCTAGATTTTAGTTGCATGTCAGTTATTCCATTTCTTACGGTTTTTCCCATAGTATTGTTGATTATGAATTTGATTAAATGTTATTCCGCGGGACTT

mRNA sequence

CTTTACCGCTTTCTTGTTCGTCGAACTGGAAGCAATTTCAATGCTGTGATTCTCAAGCGCTTGTTTATGAGCAAGGTTAACAAGCCTCCACTTTCCCTCTCTCGGCTTATCCAGTTCATGAAAGGAAAGGAAAGTAAGATTGCTGTCGTTGTTGGGACTATTACCGATGATATTCGAGTCTATGAAGTTCCAGCATTGAAAGTTGCAGCTTTGAGGTTCACTGAGACAGCAAGGGCAAGGATCGAAAAGGCTGGTGGGGAATGTTTGACATTTGACCAGCTTGCTTTGAGGGCTCCTCTGGGTCAGAACACGGTTCTTCTTAGAGGTCCTAAGAATTCTCGAGAGGCAGTGAAGCATTTCGGTCCAGCACCTGGTGTGCCACACAGCCATTCCAAGCCATATGTGAGGTCGAAGGGAAGGAAGTTTGAGAGGGCTAGAGGAAAGAGAAACAGCAGGGGATATAGGGTTTGATTTGATCTTTTACTTTTTTCCAAGCCTAATTCAATGCAAGTGTGTTATTTCGAAATTCAATATCCAAATTTTGCTAGATTTTAGTTGCATGTCAGTTATTCCATTTCTTACGGTTTTTCCCATAGTATTGTTGATTATGAATTTGATTAAATGTTATTCCGCGGGACTT

Coding sequence (CDS)

ATGAGCAAGGTTAACAAGCCTCCACTTTCCCTCTCTCGGCTTATCCAGTTCATGAAAGGAAAGGAAAGTAAGATTGCTGTCGTTGTTGGGACTATTACCGATGATATTCGAGTCTATGAAGTTCCAGCATTGAAAGTTGCAGCTTTGAGGTTCACTGAGACAGCAAGGGCAAGGATCGAAAAGGCTGGTGGGGAATGTTTGACATTTGACCAGCTTGCTTTGAGGGCTCCTCTGGGTCAGAACACGGTTCTTCTTAGAGGTCCTAAGAATTCTCGAGAGGCAGTGAAGCATTTCGGTCCAGCACCTGGTGTGCCACACAGCCATTCCAAGCCATATGTGAGGTCGAAGGGAAGGAAGTTTGAGAGGGCTAGAGGAAAGAGAAACAGCAGGGGATATAGGGTTTGA

Protein sequence

MSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYRV

Homology

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BLAST of Cmc02g0037951 vs. NCBI nr
Match: XP_008450608.1 (PREDICTED: 60S ribosomal protein L18-2 [Cucumis melo] >KAA0050917.1 60S ribosomal protein L18-2 [Cucumis melo var. makuwa] >TYK10265.1 60S ribosomal protein L18-2 [Cucumis melo var. makuwa])

HSP 1 Score: 261.5 bits (667), Expect = 3.9e-66
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 1   MSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIE 60
           MSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIE
Sbjct: 54  MSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIE 113

Query: 61  KAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKF 120
           KAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKF
Sbjct: 114 KAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKF 173

Query: 121 ERARGKRNSRGYRV 135
           ERARGKRNSRGYRV
Sbjct: 174 ERARGKRNSRGYRV 187

[Close]

BLAST of Cmc02g0037951 vs. NCBI nr
Match: XP_038887726.1 (60S ribosomal protein L18-2-like [Benincasa hispida])

HSP 1 Score: 259.6 bits (662), Expect = 1.5e-65
Identity = 133/134 (99.25%), Postives = 133/134 (99.25%), Query Frame = 0


Query: 1   MSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIE 60
           MSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDD RVYEVPALKVAALRFTETARARIE
Sbjct: 54  MSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDTRVYEVPALKVAALRFTETARARIE 113

Query: 61  KAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKF 120
           KAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKF
Sbjct: 114 KAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKF 173

Query: 121 ERARGKRNSRGYRV 135
           ERARGKRNSRGYRV
Sbjct: 174 ERARGKRNSRGYRV 187

[Close]

BLAST of Cmc02g0037951 vs. NCBI nr
Match: XP_011659839.1 (60S ribosomal protein L18-2 [Cucumis sativus] >KAE8653364.1 hypothetical protein Csa_007522 [Cucumis sativus])

HSP 1 Score: 259.2 bits (661), Expect = 1.9e-65
Identity = 133/134 (99.25%), Postives = 133/134 (99.25%), Query Frame = 0


Query: 1   MSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIE 60
           MSKVNKPPLSLSRLIQF KGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIE
Sbjct: 54  MSKVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIE 113

Query: 61  KAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKF 120
           KAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKF
Sbjct: 114 KAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKF 173

Query: 121 ERARGKRNSRGYRV 135
           ERARGKRNSRGYRV
Sbjct: 174 ERARGKRNSRGYRV 187

[Close]

BLAST of Cmc02g0037951 vs. NCBI nr
Match: XP_023531430.1 (60S ribosomal protein L18-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 257.3 bits (656), Expect = 7.3e-65
Identity = 132/134 (98.51%), Postives = 133/134 (99.25%), Query Frame = 0


Query: 1   MSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIE 60
           MS+VNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIE
Sbjct: 81  MSRVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIE 140

Query: 61  KAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKF 120
           KAGGECLTFDQLALRAPLGQNTVLLRG KNSREAVKHFGPAPGVPHSHSKPYVRSKGRKF
Sbjct: 141 KAGGECLTFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKF 200

Query: 121 ERARGKRNSRGYRV 135
           ERARGKRNSRGYRV
Sbjct: 201 ERARGKRNSRGYRV 214

[Close]

BLAST of Cmc02g0037951 vs. NCBI nr
Match: XP_022931687.1 (60S ribosomal protein L18-2-like [Cucurbita moschata])

HSP 1 Score: 257.3 bits (656), Expect = 7.3e-65
Identity = 132/134 (98.51%), Postives = 133/134 (99.25%), Query Frame = 0


Query: 1   MSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIE 60
           MS+VNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIE
Sbjct: 54  MSRVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIE 113

Query: 61  KAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKF 120
           KAGGECLTFDQLALRAPLGQNTVLLRG KNSREAVKHFGPAPGVPHSHSKPYVRSKGRKF
Sbjct: 114 KAGGECLTFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKF 173

Query: 121 ERARGKRNSRGYRV 135
           ERARGKRNSRGYRV
Sbjct: 174 ERARGKRNSRGYRV 187

[Close]

BLAST of Cmc02g0037951 vs. ExPASy Swiss-Prot
Match: P42791 (60S ribosomal protein L18-2 OS=Arabidopsis thaliana OX=3702 GN=RPL18B PE=1 SV=2)

HSP 1 Score: 236.9 bits (603), Expect = 1.3e-61
Identity = 117/134 (87.31%), Postives = 128/134 (95.52%), Query Frame = 0


Query: 1   MSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIE 60
           MSKVNK PLSLSRL++FM GKE KIAV+VGTITDD+RV+E+PA+KV ALRFTE ARARIE
Sbjct: 54  MSKVNKAPLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIE 113

Query: 61  KAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKF 120
           KAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVR+KGRKF
Sbjct: 114 KAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKF 173

Query: 121 ERARGKRNSRGYRV 135
           E+ARGKR SRG++V
Sbjct: 174 EKARGKRKSRGFKV 187

[Close]

BLAST of Cmc02g0037951 vs. ExPASy Swiss-Prot
Match: Q940B0 (60S ribosomal protein L18-3 OS=Arabidopsis thaliana OX=3702 GN=RPL18C PE=2 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 7.4e-60
Identity = 114/134 (85.07%), Postives = 127/134 (94.78%), Query Frame = 0


Query: 1   MSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIE 60
           MSKVNK PLSLSRL++FM GK+ KIAV+VGTITDD+RV+E+PA+KV ALRFTE ARARIE
Sbjct: 54  MSKVNKAPLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIE 113

Query: 61  KAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKF 120
           KAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHS++KPYVR KGRKF
Sbjct: 114 KAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKF 173

Query: 121 ERARGKRNSRGYRV 135
           E+ARGKR SRG++V
Sbjct: 174 EKARGKRKSRGFKV 187

[Close]

BLAST of Cmc02g0037951 vs. ExPASy Swiss-Prot
Match: O65729 (60S ribosomal protein L18 (Fragment) OS=Cicer arietinum OX=3827 GN=RPL18 PE=2 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 4.5e-57
Identity = 110/134 (82.09%), Postives = 125/134 (93.28%), Query Frame = 0


Query: 1   MSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIE 60
           MSKVN+PPLSLSRLI++M+GKE KI VVVG +TDDIRVY+VP +KV AL+FTETARARI+
Sbjct: 51  MSKVNRPPLSLSRLIKYMQGKEGKIGVVVGAVTDDIRVYDVPTIKVTALKFTETARARIQ 110

Query: 61  KAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKF 120
           KAGGECLTFDQLALR PL  +TVLLRGPKN+REAVKHFGPAPGVPHSH+KPYVRSKGRKF
Sbjct: 111 KAGGECLTFDQLALRLPL-TDTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKF 170

Query: 121 ERARGKRNSRGYRV 135
           E+ARG+R SRG+RV
Sbjct: 171 EKARGRRKSRGFRV 183

[Close]

BLAST of Cmc02g0037951 vs. ExPASy Swiss-Prot
Match: O22254 (Putative 60S ribosomal protein L18-1 OS=Arabidopsis thaliana OX=3702 GN=RPL18A PE=3 SV=3)

HSP 1 Score: 203.8 bits (517), Expect = 1.3e-51
Identity = 101/135 (74.81%), Postives = 118/135 (87.41%), Query Frame = 0


Query: 1   MSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIE 60
           MSKVNK PLSLSRL+++M GK+ KIAV+VGT+TDD+R+ +VPAL V ALRFTE+ARARI 
Sbjct: 54  MSKVNKAPLSLSRLVRYMDGKDGKIAVIVGTVTDDVRIEDVPALTVTALRFTESARARIH 113

Query: 61  KAGGECLTFDQLALRAPL-GQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRK 120
           KAGGECLTFDQLAL  P   +NTVLLRGPKN+REAVKHFGPAPGVPHSH+KPYVR  G+K
Sbjct: 114 KAGGECLTFDQLALPCPTWSENTVLLRGPKNTREAVKHFGPAPGVPHSHTKPYVRQTGKK 173

Query: 121 FERARGKRNSRGYRV 135
            E ARG+R SRG++V
Sbjct: 174 IEIARGRRRSRGFKV 188

[Close]

BLAST of Cmc02g0037951 vs. ExPASy Swiss-Prot
Match: Q4PM04 (60S ribosomal protein L18 OS=Ixodes scapularis OX=6945 GN=RpL18 PE=2 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 2.9e-48
Identity = 95/135 (70.37%), Postives = 119/135 (88.15%), Query Frame = 0


Query: 1   MSKVNKPPLSLSRLIQFMK--GKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARAR 60
           MS++NKP +SL+R+ +FMK  G+E+ IAVVVGT+TDD+R+Y+VP L++ ALR TE ARAR
Sbjct: 53  MSRINKPVISLARVTRFMKKPGRENLIAVVVGTVTDDLRLYDVPKLRLCALRVTERARAR 112

Query: 61  IEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGR 120
           I KAGGE LTFDQLA++AP G+ TVL++GP+NSREA +HFGPAPGVPHSH+KPYVRSKGR
Sbjct: 113 ILKAGGEILTFDQLAVQAPKGKGTVLMQGPRNSREACRHFGPAPGVPHSHTKPYVRSKGR 172

Query: 121 KFERARGKRNSRGYR 134
           KFERARG+R SR Y+
Sbjct: 173 KFERARGRRKSRRYK 187

[Close]

BLAST of Cmc02g0037951 vs. ExPASy TrEMBL
Match: A0A5A7U942 (60S ribosomal protein L18-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G004150 PE=3 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 1.9e-66
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 1   MSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIE 60
           MSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIE
Sbjct: 54  MSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIE 113

Query: 61  KAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKF 120
           KAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKF
Sbjct: 114 KAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKF 173

Query: 121 ERARGKRNSRGYRV 135
           ERARGKRNSRGYRV
Sbjct: 174 ERARGKRNSRGYRV 187

[Close]

BLAST of Cmc02g0037951 vs. ExPASy TrEMBL
Match: A0A1S3BPL9 (60S ribosomal protein L18-2 OS=Cucumis melo OX=3656 GN=LOC103492145 PE=3 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 1.9e-66
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 1   MSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIE 60
           MSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIE
Sbjct: 54  MSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIE 113

Query: 61  KAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKF 120
           KAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKF
Sbjct: 114 KAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKF 173

Query: 121 ERARGKRNSRGYRV 135
           ERARGKRNSRGYRV
Sbjct: 174 ERARGKRNSRGYRV 187

[Close]

BLAST of Cmc02g0037951 vs. ExPASy TrEMBL
Match: A0A0A0LWD1 (Ribosomal_L18e/L15P domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G569250 PE=3 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 9.3e-66
Identity = 133/134 (99.25%), Postives = 133/134 (99.25%), Query Frame = 0


Query: 1   MSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIE 60
           MSKVNKPPLSLSRLIQF KGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIE
Sbjct: 111 MSKVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIE 170

Query: 61  KAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKF 120
           KAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKF
Sbjct: 171 KAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKF 230

Query: 121 ERARGKRNSRGYRV 135
           ERARGKRNSRGYRV
Sbjct: 231 ERARGKRNSRGYRV 244

[Close]

BLAST of Cmc02g0037951 vs. ExPASy TrEMBL
Match: A0A6J1I1I5 (60S ribosomal protein L18-2 OS=Cucurbita maxima OX=3661 GN=LOC111469018 PE=3 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 3.5e-65
Identity = 132/134 (98.51%), Postives = 133/134 (99.25%), Query Frame = 0


Query: 1   MSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIE 60
           MS+VNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIE
Sbjct: 81  MSRVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIE 140

Query: 61  KAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKF 120
           KAGGECLTFDQLALRAPLGQNTVLLRG KNSREAVKHFGPAPGVPHSHSKPYVRSKGRKF
Sbjct: 141 KAGGECLTFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKF 200

Query: 121 ERARGKRNSRGYRV 135
           ERARGKRNSRGYRV
Sbjct: 201 ERARGKRNSRGYRV 214

[Close]

BLAST of Cmc02g0037951 vs. ExPASy TrEMBL
Match: A0A6J1EUD5 (60S ribosomal protein L18-2-like OS=Cucurbita moschata OX=3662 GN=LOC111437842 PE=3 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 3.5e-65
Identity = 132/134 (98.51%), Postives = 133/134 (99.25%), Query Frame = 0


Query: 1   MSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIE 60
           MS+VNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIE
Sbjct: 54  MSRVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIE 113

Query: 61  KAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKF 120
           KAGGECLTFDQLALRAPLGQNTVLLRG KNSREAVKHFGPAPGVPHSHSKPYVRSKGRKF
Sbjct: 114 KAGGECLTFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKF 173

Query: 121 ERARGKRNSRGYRV 135
           ERARGKRNSRGYRV
Sbjct: 174 ERARGKRNSRGYRV 187

[Close]

BLAST of Cmc02g0037951 vs. TAIR 10
Match: AT3G05590.1 (ribosomal protein L18 )

HSP 1 Score: 236.9 bits (603), Expect = 9.5e-63
Identity = 117/134 (87.31%), Postives = 128/134 (95.52%), Query Frame = 0


Query: 1   MSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIE 60
           MSKVNK PLSLSRL++FM GKE KIAV+VGTITDD+RV+E+PA+KV ALRFTE ARARIE
Sbjct: 54  MSKVNKAPLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIE 113

Query: 61  KAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKF 120
           KAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVR+KGRKF
Sbjct: 114 KAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKF 173

Query: 121 ERARGKRNSRGYRV 135
           E+ARGKR SRG++V
Sbjct: 174 EKARGKRKSRGFKV 187

[Close]

BLAST of Cmc02g0037951 vs. TAIR 10
Match: AT5G27850.1 (Ribosomal protein L18e/L15 superfamily protein )

HSP 1 Score: 231.1 bits (588), Expect = 5.2e-61
Identity = 114/134 (85.07%), Postives = 127/134 (94.78%), Query Frame = 0


Query: 1   MSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIE 60
           MSKVNK PLSLSRL++FM GK+ KIAV+VGTITDD+RV+E+PA+KV ALRFTE ARARIE
Sbjct: 54  MSKVNKAPLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIE 113

Query: 61  KAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKF 120
           KAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHS++KPYVR KGRKF
Sbjct: 114 KAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKF 173

Query: 121 ERARGKRNSRGYRV 135
           E+ARGKR SRG++V
Sbjct: 174 EKARGKRKSRGFKV 187

[Close]

BLAST of Cmc02g0037951 vs. TAIR 10
Match: AT2G47570.1 (Ribosomal protein L18e/L15 superfamily protein )

HSP 1 Score: 203.8 bits (517), Expect = 8.9e-53
Identity = 101/135 (74.81%), Postives = 118/135 (87.41%), Query Frame = 0


Query: 1   MSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIE 60
           MSKVNK PLSLSRL+++M GK+ KIAV+VGT+TDD+R+ +VPAL V ALRFTE+ARARI 
Sbjct: 1   MSKVNKAPLSLSRLVRYMDGKDGKIAVIVGTVTDDVRIEDVPALTVTALRFTESARARIH 60

Query: 61  KAGGECLTFDQLALRAPL-GQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRK 120
           KAGGECLTFDQLAL  P   +NTVLLRGPKN+REAVKHFGPAPGVPHSH+KPYVR  G+K
Sbjct: 61  KAGGECLTFDQLALPCPTWSENTVLLRGPKNTREAVKHFGPAPGVPHSHTKPYVRQTGKK 120

Query: 121 FERARGKRNSRGYRV 135
            E ARG+R SRG++V
Sbjct: 121 IEIARGRRRSRGFKV 135

[Close]

BLAST of Cmc02g0037951 vs. TAIR 10
Match: AT2G47570.2 (Ribosomal protein L18e/L15 superfamily protein )

HSP 1 Score: 203.8 bits (517), Expect = 8.9e-53
Identity = 101/135 (74.81%), Postives = 118/135 (87.41%), Query Frame = 0


Query: 1   MSKVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIE 60
           MSKVNK PLSLSRL+++M GK+ KIAV+VGT+TDD+R+ +VPAL V ALRFTE+ARARI 
Sbjct: 1   MSKVNKAPLSLSRLVRYMDGKDGKIAVIVGTVTDDVRIEDVPALTVTALRFTESARARIH 60

Query: 61  KAGGECLTFDQLALRAPL-GQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRK 120
           KAGGECLTFDQLAL  P   +NTVLLRGPKN+REAVKHFGPAPGVPHSH+KPYVR  G+K
Sbjct: 61  KAGGECLTFDQLALPCPTWSENTVLLRGPKNTREAVKHFGPAPGVPHSHTKPYVRQTGKK 120

Query: 121 FERARGKRNSRGYRV 135
            E ARG+R SRG++V
Sbjct: 121 IEIARGRRRSRGFKV 135

The following BLAST results are available for this feature:

BLAST of Cmc02g0037951 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008450608.1	3.9e-66	100.00	PREDICTED: 60S ribosomal protein L18-2 [Cucumis melo] >KAA0050917.1 60S ribosoma...	[more]
XP_038887726.1	1.5e-65	99.25	60S ribosomal protein L18-2-like [Benincasa hispida]	[more]
XP_011659839.1	1.9e-65	99.25	60S ribosomal protein L18-2 [Cucumis sativus] >KAE8653364.1 hypothetical protein...	[more]
XP_023531430.1	7.3e-65	98.51	60S ribosomal protein L18-2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022931687.1	7.3e-65	98.51	60S ribosomal protein L18-2-like [Cucurbita moschata]	[more]

BLAST of Cmc02g0037951 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42791	1.3e-61	87.31	60S ribosomal protein L18-2 OS=Arabidopsis thaliana OX=3702 GN=RPL18B PE=1 SV=2	[more]
Q940B0	7.4e-60	85.07	60S ribosomal protein L18-3 OS=Arabidopsis thaliana OX=3702 GN=RPL18C PE=2 SV=1	[more]
O65729	4.5e-57	82.09	60S ribosomal protein L18 (Fragment) OS=Cicer arietinum OX=3827 GN=RPL18 PE=2 SV...	[more]
O22254	1.3e-51	74.81	Putative 60S ribosomal protein L18-1 OS=Arabidopsis thaliana OX=3702 GN=RPL18A P...	[more]
Q4PM04	2.9e-48	70.37	60S ribosomal protein L18 OS=Ixodes scapularis OX=6945 GN=RpL18 PE=2 SV=1	[more]

BLAST of Cmc02g0037951 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U942	1.9e-66	100.00	60S ribosomal protein L18-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3BPL9	1.9e-66	100.00	60S ribosomal protein L18-2 OS=Cucumis melo OX=3656 GN=LOC103492145 PE=3 SV=1	[more]
A0A0A0LWD1	9.3e-66	99.25	Ribosomal_L18e/L15P domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_...	[more]
A0A6J1I1I5	3.5e-65	98.51	60S ribosomal protein L18-2 OS=Cucurbita maxima OX=3661 GN=LOC111469018 PE=3 SV=...	[more]
A0A6J1EUD5	3.5e-65	98.51	60S ribosomal protein L18-2-like OS=Cucurbita moschata OX=3662 GN=LOC111437842 P...	[more]

BLAST of Cmc02g0037951 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05590.1	9.5e-63	87.31	ribosomal protein L18	[more]
AT5G27850.1	5.2e-61	85.07	Ribosomal protein L18e/L15 superfamily protein	[more]
AT2G47570.1	8.9e-53	74.81	Ribosomal protein L18e/L15 superfamily protein	[more]
AT2G47570.2	8.9e-53	74.81	Ribosomal protein L18e/L15 superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021131	Ribosomal protein L18e/L15P	PFAM	PF17135	Ribosomal_L18	coord: 1..134 e-value: 1.4E-69 score: 233.2
None	No IPR available	GENE3D	3.100.10.10		coord: 1..134 e-value: 4.3E-72 score: 243.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..134
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..134
None	No IPR available	PANTHER	PTHR10934:SF18	60S RIBOSOMAL PROTEIN L18-1-RELATED	coord: 1..134
IPR000039	Ribosomal protein L18e	PANTHER	PTHR10934	60S RIBOSOMAL PROTEIN L18	coord: 1..134
IPR036227	Ribosomal L18e/L15P superfamily	SUPERFAMILY	52080	Ribosomal proteins L15p and L18e	coord: 2..86

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc02g0037951.1	Cmc02g0037951.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:1990904	ribonucleoprotein complex
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome