Cmc02g0037241 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc02g0037241
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	RNA helicase
Location	CMiso1.1chr02: 82353 .. 88333 (+)
RNA-Seq Expression	Cmc02g0037241
Synteny	Cmc02g0037241

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGTAAAAAACCCTCCCATATAATCGAAATATCTAAACAATCACCGCTTCACTATATATATATAGATGAGAAAAGAGTTGTAGGTAATGTGGTTAAGGCGGACGCAAAACCATATAGTCCATACGTTCTATCCTTATCGCTGGCTTTGCGATATTTGATAAACCCATCTTTTACTCTGCTCCAGTTCATACTTCATTGGGAGTTTGAGCGAGTGCAAGCTCGCAACTTACTTAGTAAGCCACTGAAGAGAAGCTGAAAACAAGAAATGGCTTCCCTTCTTGGAGTTACTGCAATTCATCATGCACCAAATCTTGATTTGTACAGAAGGATGGGAACAACGGCGACGGCATCACCGACGCCTTCTCTTTCTTTTGTTGACAAGTCCCACTTAATTGCCCTCAAAGTTCAAACTTGTTTCAGTGGTAGTAGCCGTCGCAACTTGTCCGGATTCACCTCTTCTGCAATTGCGACTCCCAATTCCATACTCAGCGAAGAGGCTTTTAGAAGTCTCGATGGCTTCTCTAAAGACCCCTTGGATGATGATCTCATCGACCCTGAACCTAATTCATCTCTTGCATTTTCTGCTGACGATGACGAGCTCGCCATTTCCAAATTAAACTTGCCCCAGCGGCTGACGGATGCTCTTCAGAAGCGTGGGATTACCCACCTCTTCCCCATTCAAGTACTATCCCACTTTCTTACCTCGCTTTATGTCCCATTTCTCATTCCTGTCTCATTTTACAGTTAATGTTGTTAGAAGTTTTTTTTTCCAATTACTTGCTAAATGCTACGGGAAAGGGGGACACGGTTTCTTTCTTTAACCAGACGCACTGCTTTAAGTTTGTAGTTGTGATTTTCTCCGTTCTCTTTCAGTATTTTTGTTAGGTTTTTTGAGGCTATTACTTTTAATTCAGATATTATCTGTTGGCTTAAATTTAAAATTCAAAATGTTATAGATGTGGGAAATGCTAACATGCAAAATCCATAGTGCACAAATTTTGAGAATGATGCATACACCTGCTTGTTTAAAAACTTTCATTTAGGATATAGATTCATTTTATTCTTAAGTTAATCTTCCAGGTTATGTTAACCACACCAGAAGAAGTAATTTGTTTCGAAGCTTAATATTCGTTTCGTTACAAGATATTTGTTGTTGAATAATTTGATTACTCATGTGGTGTGATTTTATCTCTATTTTATTTATTTATTTATTTGTTCATTTGAAACATGCAGAGAGCTGTTCTTGTCCCTGCATTAGAAGGTCGAGACCTCATTGCCCGTGCAAAGACTGGTACTGGGAAGACATTGGCTTTTGGGATACCAATTCTTAAAAAACTCACTGAAGATGATGAATCAAGAAGTTTGCGGAGGTACGAATATGTGACTGCCTAAAACCTAGTACTTAATGCATGTTTGGATTGAATTTTTAAATGTTTAAAAAAGTGTTCATAAGTGCAAAAAAAAAAAAAGTGTAACCCTTAGAAAGTCAATTCAAACACTTTTAGAGGTTTGTCTCGGGATTACTAACTTTTCAGTATTTGTTACAGGCGGTCTCGACTTCCGAGAGTTTTGGTGTTAACTCCCACCAGGGAACTAGCCAAACAAGTGGAAAAAGAGATTAAGGAATCTGCACCTTATCTGAACACTGTTTGCGTTTATGGAGGAGTTTCATATGTTACACAGCAAAATGCTCTTTCTCGTGGAGTTGATGTGGTAGTTGGAACACCTGGTCGACTAATAGACCTAATAAATGGTAACAGCCTCAATTTGGGGGAAGTTGAATATTTAGTATTAGATGAAGCAGATCAGATGCTTGCTGTTGGGTTTGAGGAGGATGTGGAAGTAATTTTAGAAAAGCTTCCATCTCAGCGACAAAACATGCTTTTCTCTGCTACTATGCCAACGTGGGTTAAGAAACTTGCACGCAAATATTTGGACAATCCATTGACCATCGATTTGGTAATCTTATACATTTTTTTAACATCTTAACTAATTACTTAATCTACCGATTTTTGACATTTGCATATTTTTTTATTGAAATAAACAATAAAATTGTGTTGGAAAGATGGTTACTCTTTGGATTATGGTGTAATGAAGAGATGAGCTAGGTTCTTTTTGTATGTTCTCTTTTCGATCCTTTTTTTTTCTTTCACTTTTCAGTTATGTTTGGGCATGCAATTTTAGTAAAGGAAGTAATATTCATCTTCTATGTGACATTGTTGTCAATTGTCATGACAGGCTAGTGTATGCAAAAAGGAAAAAATTCCAATAGTATTCTGCTTGCCTAATGCAAGTTTTAAGGAATGGAATCCACTTTGGCGTTGGAAATTGCATTTAATTCTCCATATAAAATTCAATTCCTGTTGGGTAAAAATAATCATCCTGTATTAAATGTGTAGGTTGGCGACCAAGATGAAAAGCTTGCTGAGGGGATCAAACTTCATGCCATATTAACGACTGCAACTTCGAAGCAAACTATTCTGAGAGATCTTGTAACAGTAAGAATTGAATCAGATCCCCATTTCTTCAACCATTACAGACGATTAATCTTGGGACTTGTTCTTCTGTATGCTGTAACTGTGAAGCTGTTATTTGATGTCCTGTTATGTGGTTGGTTTGAACATATTAGATTATCACTAATTATTAAAGTTTAAACTTTTGGAAAACATCAAGTTCTTTTATTGAAAAGCAAGCTGTCACTGAGAAACAAAAAACTAATTTCTTTTATCTATAAATTCTTCACATTCACCTCTAACATGAATTTTAGCTTAAAATCAATTAATTCCATTCTCATGGTTCATTTTAATAAAAGAGCATTTATGCTTGATCAAGTGTGTGTGTGTGTGTCTACTCCTTTACTAATTAAAAATTGCATCTCACTTCATTCTTGTGATACTTTTGTTTTTGCTTTTTCTTTACCTCCAGAACCTTACAAATCTTTTTTACTAATTGTCTTAAAATTTGATTTAACCCTTTTGCCCAACATAAATTGGGCATTACACGATATAAAATGCAGCCCTTGAGAAATATCTTCTACGAGACTCTTTCATTCATAATAGCATCCTTTCATTTTCATGTGAACCATATTATTTTAATGCCTGATCTCCCCAAAAACTGAGTCTAATAACATCCTGGTTTTAGGTTTATGCAAAGGGGGGAAAGACCATTGTTTTTACTCAGACAAAACGTGATGCTGATGAAGTCTCCTTGGCATTAGCTAATAGCATAACATCAGAAGCATTGCATGGAGATATATCACAGCATCAACGGGAAAGAACATTAAATGGCTTTCGGCAGGGGAAGTTCACTGTGCTGGTTGCAACTGATGTAGCTTCACGAGGACTGGATATCCCAAATGTTGATTTGGTATTCTCATTTGGACACTATTTCAGTGCCAATTTCTTTTAGTTTCAATGCTGTTCTACCCTGTCCAAATTTTCAATCTGAGGCGTTCACTAATGATTTTGCCAATTTGAGAGTAATTGAGCATTCTTCAAGTGATAGAGTCATTGTTGGCTTGTGAAGTATCTAATTCTTAGAAGTTTCATTCTCGTACTCATTTTAAGAGCTTGTAAAATTAGACCTCTTTCAAAATTTTCATTTTCTATAACAATTATCTAACTGGACTTCTATCTACCTTCACTTCAGGTTATCCATTATGAACTTCCTAATGATCCTGAGACTTTTGTACATCGCTCTGGCCGCACTGGACGTGCAGGAAAAGAGGGTACTGCCATTTTAATGTTTACAAATAGTCAAAGGAGAACAGTTAGATCACTTGAGCGTGATGTGGGGTGCAAATTTGAGTTTGCAAATCCACCTGCAATTGAGCAGGTTCTAGAATCATCAGCTGAGCAAGTGGTTGTTACTCTTCGGGGTGTTCATCCTGAATCTATTGAGTATTTCACTCCAACTGCACAGAAGTTAATTGATGAACAAGGACCGGGTGCTCTGGCGGCTGCACTAGCACAATTAAGTGGGTTCTCCCATCCTCCTTCATCACGGTCACTTATTAACCACGAACAGGTATTAAGAGTTCTGTTTGTGAATTTATTATAGCTAGAAAATTATCTCTTGCAAATGGTTGTCATTAAGGTAAAACATATTTGTTGCAGGGATGGGTGACATTGCAGCTGACCAGGGATCCATCTTATTCACGTGGGTTTTTGTCTGCTAGGTCTGTCACTGGATTTCTGTCTGACATTTATTCTCCAGCTGCAGACGAAATTGGAAAAATACATCTAATTGCCGATGAAAGGGTGAAAATCTTTTGCATGCTGTACCTATTTCATGTCTTTAATTTTAAATTTTCACTGGCATTCAATTTTGTTTTATAAACTTAAATATTGATGTTGGTAATGGCAGATAAATGGAGCAGTATTTGATCTTCCAGAGGAAATAGCAAAAGAGTTGCTGAATAAGGAACTACCAGAAGGAAATACTATTTTGAAGGTAACGAAGGTAAGTTTGTTCCTTCCTCCTCTCACGATCACAATTGTGGCTTAGTTAATAATATTCTTATGTTGCCTCAAAAATAATGTTATCTCTTTGATGCATGACCATTGACTAACAGAATGTTGGAACACATTCCAATACTTCATTTTTTTGCAGTTACCTCCTCTGCAGGACGATGGCCCACCAAGTGACAACTACGGAAGATTTTCTGGCAGAGAAAGAAATAGTCGAAATAGCTCTAGGGATCGCAGAGGTTTTAGAACTTCAAGGGGATGGGGAAGCAGTCGAGATTCTGATGCCGATGGTGATATGTTTAGTAGAAATCGCAGTTTTAGAACCAACAGCAGCAAGGGTCGAAATTTTAGAAGCTCAGGAGATGATTGGCTAATTGGAGGCAGACGATCAAGCAGGTCATCATCCGTGGATAGGTAACTTTTTTTGCTTATTATGATAGAGGGTATTGTGCATTTCCTTGTAACAGTGTTTTGGAAGTAAAATGATGGGTTTTAGCAAGACAGTGAAAGGCATGCATTAATCTTTAAAAGTATAGCAAGACTGTTTTGGGATGGTGTGTTGAGTATGCAGTTGATTTCGTTTGGATTTCCTTTTTTAATTATTGGCGTATTTAGGTTCTGGTTTCTTATTCTCTTTTTCCTCGGGGAGGGGAGGGAAGAGGTGGGGGAGGTGTTCCAGGAAAGAACTTTTAAGGATTAAATTTTGGGAAATTATTCATATTCTTATTATGTCGAATATTTCTCCAAAGGTGATTCGAAATTCATTGGTGTTCATTAATGATTATGATAAGCATCTACGGTATCTGAAGAAATTATAAATTTTGTTTTCTAGTTTTGAACTTGGAAGTGTTCTTGCGATTTTGTTCTTCCATTTTCCCTTACATTTCTACTTAATAATTCATCTAGGAGACTAGAGCCTGTTTCGTTCACTCATCTGGGAAGTTACTCTGTTTTCTTTCTTCTTCTTCTTCTTCTTATTTTTCTTTTTTCTTTTTTTTTTTTCATTTTGAATTTGTTTTCACTAATTCTTCTGTGATGTAATCTGGATATATTTTGCAGATTTGGCGGCTCCTGTTTTAACTGCGGAAGGATGGGACACAGGGCATCAGAATGCCCTGACAAGTGATAAGCAAGACGACTAAGTATACTTGATCAGCTTCTAGTTATTGTGGGGACTCATAGGTAGGTTTTTGGGTTCAGCTAAGTTGCATCATCTTACATTTAGGTGGCTGGTATTCAGGTCTCGAAGATGCTGCTTGAAGAGTTAACAGTCTCATGTTGCGTTACAAGATTACTTTTTACAATCTCAGTCTGTTGTAATTTAAGTTTTGCGGGGTGAAGCATTCAAAATTGATTTGTCATGTAATGAGTTATATGGATACCCTTTTTCGACCCCCCATGCAGAATGTAAATGTTTCGGAAGAATGAAGAAATGAAAAACGGCATAGAATTCCGTTGATTATAACTTGATTTACTAATTCCTTGGAACAGCCCAGGATCTCTATGAGATGG

mRNA sequence

GTGTAAAAAACCCTCCCATATAATCGAAATATCTAAACAATCACCGCTTCACTATATATATATAGATGAGAAAAGAGTTGTAGGTAATGTGGTTAAGGCGGACGCAAAACCATATAGTCCATACGTTCTATCCTTATCGCTGGCTTTGCGATATTTGATAAACCCATCTTTTACTCTGCTCCAGTTCATACTTCATTGGGAGTTTGAGCGAGTGCAAGCTCGCAACTTACTTAGTAAGCCACTGAAGAGAAGCTGAAAACAAGAAATGGCTTCCCTTCTTGGAGTTACTGCAATTCATCATGCACCAAATCTTGATTTGTACAGAAGGATGGGAACAACGGCGACGGCATCACCGACGCCTTCTCTTTCTTTTGTTGACAAGTCCCACTTAATTGCCCTCAAAGTTCAAACTTGTTTCAGTGGTAGTAGCCGTCGCAACTTGTCCGGATTCACCTCTTCTGCAATTGCGACTCCCAATTCCATACTCAGCGAAGAGGCTTTTAGAAGTCTCGATGGCTTCTCTAAAGACCCCTTGGATGATGATCTCATCGACCCTGAACCTAATTCATCTCTTGCATTTTCTGCTGACGATGACGAGCTCGCCATTTCCAAATTAAACTTGCCCCAGCGGCTGACGGATGCTCTTCAGAAGCGTGGGATTACCCACCTCTTCCCCATTCAAAGAGCTGTTCTTGTCCCTGCATTAGAAGGTCGAGACCTCATTGCCCGTGCAAAGACTGGTACTGGGAAGACATTGGCTTTTGGGATACCAATTCTTAAAAAACTCACTGAAGATGATGAATCAAGAAGTTTGCGGAGGCGGTCTCGACTTCCGAGAGTTTTGGTGTTAACTCCCACCAGGGAACTAGCCAAACAAGTGGAAAAAGAGATTAAGGAATCTGCACCTTATCTGAACACTGTTTGCGTTTATGGAGGAGTTTCATATGTTACACAGCAAAATGCTCTTTCTCGTGGAGTTGATGTGGTAGTTGGAACACCTGGTCGACTAATAGACCTAATAAATGGTAACAGCCTCAATTTGGGGGAAGTTGAATATTTAGTATTAGATGAAGCAGATCAGATGCTTGCTGTTGGGTTTGAGGAGGATGTGGAAGTAATTTTAGAAAAGCTTCCATCTCAGCGACAAAACATGCTTTTCTCTGCTACTATGCCAACGTGGGTTAAGAAACTTGCACGCAAATATTTGGACAATCCATTGACCATCGATTTGGTTGGCGACCAAGATGAAAAGCTTGCTGAGGGGATCAAACTTCATGCCATATTAACGACTGCAACTTCGAAGCAAACTATTCTGAGAGATCTTGTAACAGTTTATGCAAAGGGGGGAAAGACCATTGTTTTTACTCAGACAAAACGTGATGCTGATGAAGTCTCCTTGGCATTAGCTAATAGCATAACATCAGAAGCATTGCATGGAGATATATCACAGCATCAACGGGAAAGAACATTAAATGGCTTTCGGCAGGGGAAGTTCACTGTGCTGGTTGCAACTGATGTAGCTTCACGAGGACTGGATATCCCAAATGTTGATTTGGTTATCCATTATGAACTTCCTAATGATCCTGAGACTTTTGTACATCGCTCTGGCCGCACTGGACGTGCAGGAAAAGAGGGTACTGCCATTTTAATGTTTACAAATAGTCAAAGGAGAACAGTTAGATCACTTGAGCGTGATGTGGGGTGCAAATTTGAGTTTGCAAATCCACCTGCAATTGAGCAGGTTCTAGAATCATCAGCTGAGCAAGTGGTTGTTACTCTTCGGGGTGTTCATCCTGAATCTATTGAGTATTTCACTCCAACTGCACAGAAGTTAATTGATGAACAAGGACCGGGTGCTCTGGCGGCTGCACTAGCACAATTAAGTGGGTTCTCCCATCCTCCTTCATCACGGTCACTTATTAACCACGAACAGGGATGGGTGACATTGCAGCTGACCAGGGATCCATCTTATTCACGTGGGTTTTTGTCTGCTAGGTCTGTCACTGGATTTCTGTCTGACATTTATTCTCCAGCTGCAGACGAAATTGGAAAAATACATCTAATTGCCGATGAAAGGATAAATGGAGCAGTATTTGATCTTCCAGAGGAAATAGCAAAAGAGTTGCTGAATAAGGAACTACCAGAAGGAAATACTATTTTGAAGGTAACGAAGTTACCTCCTCTGCAGGACGATGGCCCACCAAGTGACAACTACGGAAGATTTTCTGGCAGAGAAAGAAATAGTCGAAATAGCTCTAGGGATCGCAGAGGTTTTAGAACTTCAAGGGGATGGGGAAGCAGTCGAGATTCTGATGCCGATGGTGATATGTTTAGTAGAAATCGCAGTTTTAGAACCAACAGCAGCAAGGGTCGAAATTTTAGAAGCTCAGGAGATGATTGGCTAATTGGAGGCAGACGATCAAGCAGGTCATCATCCGTGGATAGATTTGGCGGCTCCTGTTTTAACTGCGGAAGGATGGGACACAGGGCATCAGAATGCCCTGACAAGTGATAAGCAAGACGACTAAGTATACTTGATCAGCTTCTAGTTATTGTGGGGACTCATAGGTAGGTTTTTGGGTTCAGCTAAGTTGCATCATCTTACATTTAGGTGGCTGGTATTCAGGTCTCGAAGATGCTGCTTGAAGAGTTAACAGTCTCATGTTGCGTTACAAGATTACTTTTTACAATCTCAGTCTGTTGTAATTTAAGTTTTGCGGGGTGAAGCATTCAAAATTGATTTGTCATGTAATGAGTTATATGGATACCCTTTTTCGACCCCCCATGCAGAATGTAAATGTTTCGGAAGAATGAAGAAATGAAAAACGGCATAGAATTCCGTTGATTATAACTTGATTTACTAATTCCTTGGAACAGCCCAGGATCTCTATGAGATGG

Coding sequence (CDS)

ATGGCTTCCCTTCTTGGAGTTACTGCAATTCATCATGCACCAAATCTTGATTTGTACAGAAGGATGGGAACAACGGCGACGGCATCACCGACGCCTTCTCTTTCTTTTGTTGACAAGTCCCACTTAATTGCCCTCAAAGTTCAAACTTGTTTCAGTGGTAGTAGCCGTCGCAACTTGTCCGGATTCACCTCTTCTGCAATTGCGACTCCCAATTCCATACTCAGCGAAGAGGCTTTTAGAAGTCTCGATGGCTTCTCTAAAGACCCCTTGGATGATGATCTCATCGACCCTGAACCTAATTCATCTCTTGCATTTTCTGCTGACGATGACGAGCTCGCCATTTCCAAATTAAACTTGCCCCAGCGGCTGACGGATGCTCTTCAGAAGCGTGGGATTACCCACCTCTTCCCCATTCAAAGAGCTGTTCTTGTCCCTGCATTAGAAGGTCGAGACCTCATTGCCCGTGCAAAGACTGGTACTGGGAAGACATTGGCTTTTGGGATACCAATTCTTAAAAAACTCACTGAAGATGATGAATCAAGAAGTTTGCGGAGGCGGTCTCGACTTCCGAGAGTTTTGGTGTTAACTCCCACCAGGGAACTAGCCAAACAAGTGGAAAAAGAGATTAAGGAATCTGCACCTTATCTGAACACTGTTTGCGTTTATGGAGGAGTTTCATATGTTACACAGCAAAATGCTCTTTCTCGTGGAGTTGATGTGGTAGTTGGAACACCTGGTCGACTAATAGACCTAATAAATGGTAACAGCCTCAATTTGGGGGAAGTTGAATATTTAGTATTAGATGAAGCAGATCAGATGCTTGCTGTTGGGTTTGAGGAGGATGTGGAAGTAATTTTAGAAAAGCTTCCATCTCAGCGACAAAACATGCTTTTCTCTGCTACTATGCCAACGTGGGTTAAGAAACTTGCACGCAAATATTTGGACAATCCATTGACCATCGATTTGGTTGGCGACCAAGATGAAAAGCTTGCTGAGGGGATCAAACTTCATGCCATATTAACGACTGCAACTTCGAAGCAAACTATTCTGAGAGATCTTGTAACAGTTTATGCAAAGGGGGGAAAGACCATTGTTTTTACTCAGACAAAACGTGATGCTGATGAAGTCTCCTTGGCATTAGCTAATAGCATAACATCAGAAGCATTGCATGGAGATATATCACAGCATCAACGGGAAAGAACATTAAATGGCTTTCGGCAGGGGAAGTTCACTGTGCTGGTTGCAACTGATGTAGCTTCACGAGGACTGGATATCCCAAATGTTGATTTGGTTATCCATTATGAACTTCCTAATGATCCTGAGACTTTTGTACATCGCTCTGGCCGCACTGGACGTGCAGGAAAAGAGGGTACTGCCATTTTAATGTTTACAAATAGTCAAAGGAGAACAGTTAGATCACTTGAGCGTGATGTGGGGTGCAAATTTGAGTTTGCAAATCCACCTGCAATTGAGCAGGTTCTAGAATCATCAGCTGAGCAAGTGGTTGTTACTCTTCGGGGTGTTCATCCTGAATCTATTGAGTATTTCACTCCAACTGCACAGAAGTTAATTGATGAACAAGGACCGGGTGCTCTGGCGGCTGCACTAGCACAATTAAGTGGGTTCTCCCATCCTCCTTCATCACGGTCACTTATTAACCACGAACAGGGATGGGTGACATTGCAGCTGACCAGGGATCCATCTTATTCACGTGGGTTTTTGTCTGCTAGGTCTGTCACTGGATTTCTGTCTGACATTTATTCTCCAGCTGCAGACGAAATTGGAAAAATACATCTAATTGCCGATGAAAGGATAAATGGAGCAGTATTTGATCTTCCAGAGGAAATAGCAAAAGAGTTGCTGAATAAGGAACTACCAGAAGGAAATACTATTTTGAAGGTAACGAAGTTACCTCCTCTGCAGGACGATGGCCCACCAAGTGACAACTACGGAAGATTTTCTGGCAGAGAAAGAAATAGTCGAAATAGCTCTAGGGATCGCAGAGGTTTTAGAACTTCAAGGGGATGGGGAAGCAGTCGAGATTCTGATGCCGATGGTGATATGTTTAGTAGAAATCGCAGTTTTAGAACCAACAGCAGCAAGGGTCGAAATTTTAGAAGCTCAGGAGATGATTGGCTAATTGGAGGCAGACGATCAAGCAGGTCATCATCCGTGGATAGATTTGGCGGCTCCTGTTTTAACTGCGGAAGGATGGGACACAGGGCATCAGAATGCCCTGACAAGTGA

Protein sequence

MASLLGVTAIHHAPNLDLYRRMGTTATASPTPSLSFVDKSHLIALKVQTCFSGSSRRNLSGFTSSAIATPNSILSEEAFRSLDGFSKDPLDDDLIDPEPNSSLAFSADDDELAISKLNLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDESRSLRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDVVVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSATMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGCKFEFANPPAIEQVLESSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAAALAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEIGKIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQDDGPPSDNYGRFSGRERNSRNSSRDRRGFRTSRGWGSSRDSDADGDMFSRNRSFRTNSSKGRNFRSSGDDWLIGGRRSSRSSSVDRFGGSCFNCGRMGHRASECPDK

Homology

[Close]

BLAST of Cmc02g0037241 vs. NCBI nr
Match: XP_008450498.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Cucumis melo])

HSP 1 Score: 1446.4 bits (3743), Expect = 0.0e+00
Identity = 746/748 (99.73%), Postives = 747/748 (99.87%), Query Frame = 0


Query: 1   MASLLGVTAIHHAPNLDLYRRMGTTATASPTPSLSFVDKSHLIALKVQTCFSGSSRRNLS 60
           MASLLGVTAIHHAPNLDLYRRMGTTATASPTPSLSFVDKSHLIALKVQTCFSGSSRRNLS
Sbjct: 1   MASLLGVTAIHHAPNLDLYRRMGTTATASPTPSLSFVDKSHLIALKVQTCFSGSSRRNLS 60

Query: 61  GFTSSAIATPNSILSEEAFRSLDGFSKDPLDDDLIDPEPNSSLAFSADDDELAISKLNLP 120
           GFTSSAIATPNSILSEEAFRSLDGFSKDPLDD+LIDPEPNSSLAFSADDDELAISKLNLP
Sbjct: 61  GFTSSAIATPNSILSEEAFRSLDGFSKDPLDDNLIDPEPNSSLAFSADDDELAISKLNLP 120

Query: 121 QRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDES 180
           QRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDES
Sbjct: 121 QRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDES 180

Query: 181 RSLRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDV 240
           RSLRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDV
Sbjct: 181 RSLRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDV 240

Query: 241 VVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSA 300
           VVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSA
Sbjct: 241 VVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSA 300

Query: 301 TMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKG 360
           TMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKG
Sbjct: 301 TMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKG 360

Query: 361 GKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAS 420
           GKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAS
Sbjct: 361 GKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAS 420

Query: 421 RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGC 480
           RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGC
Sbjct: 421 RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGC 480

Query: 481 KFEFANPPAIEQVLESSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAAALAQLS 540
           KFEFANPPAIEQVLESSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAAALAQLS
Sbjct: 481 KFEFANPPAIEQVLESSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAAALAQLS 540

Query: 541 GFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEIGKIHLI 600
           GFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEIGKIHLI
Sbjct: 541 GFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEIGKIHLI 600

Query: 601 ADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQDDGPPSDNYGRFSGRERNS 660
           ADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQDDGPPSDNYGRFSGRERNS
Sbjct: 601 ADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQDDGPPSDNYGRFSGRERNS 660

Query: 661 RNSSRDRRGFRTSRGWGSSRDSDADGDMFSRNRSFRTNSSKGRNFRSSGDDWLIGGRRSS 720
           RNSSRDRRGFRTSRGWGSSRDSD DGDMFSRNRSFRTNSSKGRNFRSSGDDWLIGGRRSS
Sbjct: 661 RNSSRDRRGFRTSRGWGSSRDSDDDGDMFSRNRSFRTNSSKGRNFRSSGDDWLIGGRRSS 720

Query: 721 RSSSVDRFGGSCFNCGRMGHRASECPDK 749
           RSSSVDRFGGSCFNCGRMGHRASECPDK
Sbjct: 721 RSSSVDRFGGSCFNCGRMGHRASECPDK 748

[Close]

BLAST of Cmc02g0037241 vs. NCBI nr
Match: XP_004135577.1 (DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Cucumis sativus] >KGN66001.1 hypothetical protein Csa_007094 [Cucumis sativus])

HSP 1 Score: 1411.0 bits (3651), Expect = 0.0e+00
Identity = 725/748 (96.93%), Postives = 740/748 (98.93%), Query Frame = 0


Query: 1   MASLLGVTAIHHAPNLDLYRRMGTTATASPTPSLSFVDKSHLIALKVQTCFSGSSRRNLS 60
           MASLLGVTAI HAPNLDLYRR GTTATASPTPSLSFVDKSHLIALKVQTCFSGSSRRNLS
Sbjct: 1   MASLLGVTAILHAPNLDLYRRTGTTATASPTPSLSFVDKSHLIALKVQTCFSGSSRRNLS 60

Query: 61  GFTSSAIATPNSILSEEAFRSLDGFSKDPLDDDLIDPEPNSSLAFSADDDELAISKLNLP 120
           GFTSSAIATPNSILSEEAFRS DGFS+D LDD+LIDPEPNSSLAF+ADDDELAISKLNLP
Sbjct: 61  GFTSSAIATPNSILSEEAFRSFDGFSEDSLDDNLIDPEPNSSLAFAADDDELAISKLNLP 120

Query: 121 QRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDES 180
           QRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDES
Sbjct: 121 QRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDES 180

Query: 181 RSLRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDV 240
           RSLRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSY+TQQNALSRGVDV
Sbjct: 181 RSLRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYITQQNALSRGVDV 240

Query: 241 VVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSA 300
           VVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSA
Sbjct: 241 VVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSA 300

Query: 301 TMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKG 360
           TMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKG
Sbjct: 301 TMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKG 360

Query: 361 GKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAS 420
           GKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAS
Sbjct: 361 GKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAS 420

Query: 421 RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGC 480
           RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGC
Sbjct: 421 RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGC 480

Query: 481 KFEFANPPAIEQVLESSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAAALAQLS 540
           KFEFANPP +E+VL+SSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQG GALAAALAQLS
Sbjct: 481 KFEFANPPGMEEVLKSSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGLGALAAALAQLS 540

Query: 541 GFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEIGKIHLI 600
           GF+HPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSD+YSPAADEIGKIHLI
Sbjct: 541 GFTHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDVYSPAADEIGKIHLI 600

Query: 601 ADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQDDGPPSDNYGRFSGRERNS 660
           ADERINGAVFDLPEEIAKELLNKELPEGNTILK+TKLPPLQDDGPPSDNYGRFSGRER+S
Sbjct: 601 ADERINGAVFDLPEEIAKELLNKELPEGNTILKITKLPPLQDDGPPSDNYGRFSGRERSS 660

Query: 661 RNSSRDRRGFRTSRGWGSSRDSDADGDMFSRNRSFRTNSSKGRNFRSSGDDWLIGGRRSS 720
           RNSSRDRRG +TSRGWGSSRDSD +GD+FSRNRSFRTN+SKGRNFRSSGDDWLIGGRRSS
Sbjct: 661 RNSSRDRRGLKTSRGWGSSRDSDDNGDIFSRNRSFRTNNSKGRNFRSSGDDWLIGGRRSS 720

Query: 721 RSSSVDRFGGSCFNCGRMGHRASECPDK 749
           RSSSVDRFGGSCFNCGRMGHRASECPDK
Sbjct: 721 RSSSVDRFGGSCFNCGRMGHRASECPDK 748

[Close]

BLAST of Cmc02g0037241 vs. NCBI nr
Match: XP_038879136.1 (DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Benincasa hispida])

HSP 1 Score: 1401.0 bits (3625), Expect = 0.0e+00
Identity = 724/753 (96.15%), Postives = 739/753 (98.14%), Query Frame = 0


Query: 1   MASLLGVTAIHHAPNLDLYRRMGTTATASPTPSLSFVDKSHLIALKVQTCFSGSSRRNLS 60
           MASLLGVTAIHHAPNLD+YRRMGTTATASPTPSLSF +KSHLIALK QTCFSGSSRRNLS
Sbjct: 1   MASLLGVTAIHHAPNLDMYRRMGTTATASPTPSLSFAEKSHLIALKAQTCFSGSSRRNLS 60

Query: 61  GFT-SSAIATPNSILSEEAFRSLDGFSKDPLDDDLIDPEPNSSLAFS----ADDDELAIS 120
           GFT SSAIATPNSILSEEAFRSLDGFSKD LD +L+D E NSSLAFS    ADDDELAIS
Sbjct: 61  GFTSSSAIATPNSILSEEAFRSLDGFSKDSLDGNLVDSESNSSLAFSTAPPADDDELAIS 120

Query: 121 KLNLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLT 180
           KLNLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLT
Sbjct: 121 KLNLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLT 180

Query: 181 EDDESRSLRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALS 240
           EDDE RS RRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSY+TQQNALS
Sbjct: 181 EDDELRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYITQQNALS 240

Query: 241 RGVDVVVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQN 300
           RGVDVVVGTPGR+IDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQ+
Sbjct: 241 RGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQS 300

Query: 301 MLFSATMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVT 360
           MLFSATMPTWVKKLARKYL+NPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVT
Sbjct: 301 MLFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVT 360

Query: 361 VYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVA 420
           VYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVA
Sbjct: 361 VYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVA 420

Query: 421 TDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLE 480
           TDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLE
Sbjct: 421 TDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLE 480

Query: 481 RDVGCKFEFANPPAIEQVLESSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAAA 540
           RDVGCKFEFANPPAIE+VLESSAEQVVVTLRGVHPESIE+FTPTA+KLIDEQGPGALAAA
Sbjct: 481 RDVGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEFFTPTARKLIDEQGPGALAAA 540

Query: 541 LAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEIG 600
           LAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADE+G
Sbjct: 541 LAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEVG 600

Query: 601 KIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQDDGPPSDNYGRFSG 660
           KIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQDDGPPSDNYGRFSG
Sbjct: 601 KIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQDDGPPSDNYGRFSG 660

Query: 661 RERNSRNSSRDRRGFRTSRGWGSSRDSDADGDMFSRNRSFRTNSSKGRNFRSSGDDWLIG 720
           RERNSRNSSRDRRGFRTSRGWGSSRDSD DGD+FSRNRSFRTNSS+GRNF+SSGDDWLIG
Sbjct: 661 RERNSRNSSRDRRGFRTSRGWGSSRDSDDDGDLFSRNRSFRTNSSRGRNFKSSGDDWLIG 720

Query: 721 GRRSSRSSSVDRFGGSCFNCGRMGHRASECPDK 749
           GRRSSRSSSVDRFGGSCFNCGRMGHRASECPDK
Sbjct: 721 GRRSSRSSSVDRFGGSCFNCGRMGHRASECPDK 753

[Close]

BLAST of Cmc02g0037241 vs. NCBI nr
Match: KAA0050973.1 (DEAD-box ATP-dependent RNA helicase 3 [Cucumis melo var. makuwa] >TYK10319.1 DEAD-box ATP-dependent RNA helicase 3 [Cucumis melo var. makuwa])

HSP 1 Score: 1398.3 bits (3618), Expect = 0.0e+00
Identity = 725/727 (99.72%), Postives = 726/727 (99.86%), Query Frame = 0


Query: 1   MASLLGVTAIHHAPNLDLYRRMGTTATASPTPSLSFVDKSHLIALKVQTCFSGSSRRNLS 60
           MASLLGVTAIHHAPNLDLYRRMGTTATASPTPSLSFVDKSHLIALKVQTCFSGSSRRNLS
Sbjct: 1   MASLLGVTAIHHAPNLDLYRRMGTTATASPTPSLSFVDKSHLIALKVQTCFSGSSRRNLS 60

Query: 61  GFTSSAIATPNSILSEEAFRSLDGFSKDPLDDDLIDPEPNSSLAFSADDDELAISKLNLP 120
           GFTSSAIATPNSILSEEAFRSLDGFSKDPLDD+LIDPEPNSSLAFSADDDELAISKLNLP
Sbjct: 61  GFTSSAIATPNSILSEEAFRSLDGFSKDPLDDNLIDPEPNSSLAFSADDDELAISKLNLP 120

Query: 121 QRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDES 180
           QRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDES
Sbjct: 121 QRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDES 180

Query: 181 RSLRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDV 240
           RSLRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDV
Sbjct: 181 RSLRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDV 240

Query: 241 VVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSA 300
           VVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSA
Sbjct: 241 VVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSA 300

Query: 301 TMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKG 360
           TMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKG
Sbjct: 301 TMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKG 360

Query: 361 GKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAS 420
           GKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAS
Sbjct: 361 GKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAS 420

Query: 421 RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGC 480
           RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGC
Sbjct: 421 RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGC 480

Query: 481 KFEFANPPAIEQVLESSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAAALAQLS 540
           KFEFANPPAIEQVLESSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAAALAQLS
Sbjct: 481 KFEFANPPAIEQVLESSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAAALAQLS 540

Query: 541 GFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEIGKIHLI 600
           GFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEIGKIHLI
Sbjct: 541 GFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEIGKIHLI 600

Query: 601 ADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQDDGPPSDNYGRFSGRERNS 660
           ADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQDDGPPSDNYGRFSGRERNS
Sbjct: 601 ADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQDDGPPSDNYGRFSGRERNS 660

Query: 661 RNSSRDRRGFRTSRGWGSSRDSDADGDMFSRNRSFRTNSSKGRNFRSSGDDWLIGGRRSS 720
           RNSSRDRRGFRTSRGWGSSRDSD DGDMFSRNRSFRTNSSKGRNFRSSGDDWLIGGRRSS
Sbjct: 661 RNSSRDRRGFRTSRGWGSSRDSDDDGDMFSRNRSFRTNSSKGRNFRSSGDDWLIGGRRSS 720

Query: 721 RSSSVDR 728
           RSSSVDR
Sbjct: 721 RSSSVDR 727

[Close]

BLAST of Cmc02g0037241 vs. NCBI nr
Match: XP_022157915.1 (DEAD-box ATP-dependent RNA helicase 3, chloroplastic isoform X1 [Momordica charantia])

HSP 1 Score: 1326.2 bits (3431), Expect = 0.0e+00
Identity = 691/765 (90.33%), Postives = 719/765 (93.99%), Query Frame = 0


Query: 1   MASLLGVTAIHHAPNLDLYRRMGTTATASPTPSLSFVDKSHLIALKVQTCFSGSSRRNL- 60
           MAS+LGVTAIHHAPNLD+YRRMGT AT SPTPSLSF DKSH+ A K QT FS  SRRNL 
Sbjct: 1   MASILGVTAIHHAPNLDIYRRMGTAATPSPTPSLSFADKSHINASKAQTSFSSGSRRNLA 60

Query: 61  -----------SGFTSSAIATPNSILSEEAFRSLDGFSKDPLDDDLIDPEPNSSLAFS-- 120
                      SGF+SSAIATPNSILSEEAF+SLDGFSK    DD ID +PNSSL FS  
Sbjct: 61  FSDGSSAGTFKSGFSSSAIATPNSILSEEAFKSLDGFSK----DDFIDSQPNSSLGFSAD 120

Query: 121 --ADDDELAISKLNLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTL 180
             AD+DELAISKL LPQRLT++L+KRGIT LFPIQRAVLVPALEGRDLIARAKTGTGKTL
Sbjct: 121 SPADEDELAISKLGLPQRLTESLEKRGITSLFPIQRAVLVPALEGRDLIARAKTGTGKTL 180

Query: 181 AFGIPILKKLTEDDESRSLRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGG 240
           AFGIPI+K+LTEDDE RS RRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGG
Sbjct: 181 AFGIPIIKRLTEDDELRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGG 240

Query: 241 VSYVTQQNALSRGVDVVVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEV 300
           VSYVTQQNAL+RGVDVVVGTPGR+IDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEV
Sbjct: 241 VSYVTQQNALTRGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEV 300

Query: 301 ILEKLPSQRQNMLFSATMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTAT 360
           IL+KLP+QRQNMLFSATMPTWVKKLARKYL+NPLTIDLVG QDEKLAEGIKL+AILTTAT
Sbjct: 301 ILQKLPTQRQNMLFSATMPTWVKKLARKYLENPLTIDLVGXQDEKLAEGIKLYAILTTAT 360

Query: 361 SKQTILRDLVTVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNG 420
           SKQTILRDLVTVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNG
Sbjct: 361 SKQTILRDLVTVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNG 420

Query: 421 FRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFT 480
           FRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEG+AILMFT
Sbjct: 421 FRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMFT 480

Query: 481 NSQRRTVRSLERDVGCKFEFANPPAIEQVLESSAEQVVVTLRGVHPESIEYFTPTAQKLI 540
           NSQRRTVRSLERDVGCKFEFANPPAIE VLESSAEQVV TLRGVHPESIE+FTPTAQKLI
Sbjct: 481 NSQRRTVRSLERDVGCKFEFANPPAIEDVLESSAEQVVATLRGVHPESIEFFTPTAQKLI 540

Query: 541 DEQGPGALAAALAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLS 600
           DEQG GALAAALAQLSGFSHPPSSRSLI+HEQGWVTLQLTRDPSYSRGFLSARSVTGFLS
Sbjct: 541 DEQGAGALAAALAQLSGFSHPPSSRSLISHEQGWVTLQLTRDPSYSRGFLSARSVTGFLS 600

Query: 601 DIYSPAADEIGKIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQDDG 660
           DIYSPAADE+GKIHLIADERI+GAVFDLPEEIAKELLNK LPEGNTILKVTKLPPLQDDG
Sbjct: 601 DIYSPAADEVGKIHLIADERIHGAVFDLPEEIAKELLNKPLPEGNTILKVTKLPPLQDDG 660

Query: 661 PPSDNYGRFSGRERNSRNSSRDRRGFRTSRGWGSSRDSDADGDMFSRNRSFRT-NSSKGR 720
           PPSDNYGRFSGRERNSRN+SRDRRGFRTSRGWGS RDSD DGD+FSRNRSFRT NSS+ R
Sbjct: 661 PPSDNYGRFSGRERNSRNNSRDRRGFRTSRGWGSGRDSDDDGDLFSRNRSFRTNNSSRSR 720

Query: 721 NFRSSGDDWLIGGRRSSRSSSVDRFGGSCFNCGRMGHRASECPDK 749
           NF+SSGDDWLIGGRRSSRSSS+D FGGSCFNCGRMGHRASECPDK
Sbjct: 721 NFKSSGDDWLIGGRRSSRSSSMDGFGGSCFNCGRMGHRASECPDK 761

[Close]

BLAST of Cmc02g0037241 vs. ExPASy Swiss-Prot
Match: Q8L7S8 (DEAD-box ATP-dependent RNA helicase 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RH3 PE=1 SV=2)

HSP 1 Score: 971.5 bits (2510), Expect = 5.6e-282
Identity = 535/759 (70.49%), Postives = 616/759 (81.16%), Query Frame = 0


Query: 1   MASLLGVTAIHHAPNLDLYRRMGTTATASPTPSLSFVDKSHLIALKVQTCFSGSSRR--N 60
           MAS +GV +++  P+L++ +    +   S   SLS +DK     L +       +RR  +
Sbjct: 1   MASTVGVPSLYQVPHLEISK--PNSKKRSNCLSLS-LDKPFFTPLSLVR----RTRRIHS 60

Query: 61  LSGFTSSAIATPNSILSEEAFRSLDGFSKDPLDDDLIDPEPNSSLAFSADDDELAISKLN 120
            S    SA+ATPNS+LSEEAF+SL G S    D D  D + +++   + D +ELAISKL+
Sbjct: 61  SSLLVPSAVATPNSVLSEEAFKSL-GLS----DHDEYDLDGDNNNVEADDGEELAISKLS 120

Query: 121 LPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTED- 180
           LPQRL ++L+KRGITHLFPIQRAVLVPAL+GRD+IARAKTGTGKTLAFGIPI+K+LTE+ 
Sbjct: 121 LPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEA 180

Query: 181 DESRSLRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRG 240
            +  + RR  RLP+ LVL PTRELAKQVEKEIKESAPYL+TVCVYGGVSY  QQ+AL+RG
Sbjct: 181 GDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYTIQQSALTRG 240

Query: 241 VDVVVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNML 300
           VDVVVGTPGR+IDLI G SL LGEVEYLVLDEADQMLAVGFEE VE ILE LP++RQ+ML
Sbjct: 241 VDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQSML 300

Query: 301 FSATMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVY 360
           FSATMPTWVKKLARKYLDNPL IDLVGDQDEKLAEGIKL+AI TT+TSK+TIL DL+TVY
Sbjct: 301 FSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLITVY 360

Query: 361 AKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATD 420
           AKGGKTIVFTQTKRDADEVSLAL+NSI +EALHGDISQHQRERTLN FRQGKFTVLVATD
Sbjct: 361 AKGGKTIVFTQTKRDADEVSLALSNSIATEALHGDISQHQRERTLNAFRQGKFTVLVATD 420

Query: 421 VASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERD 480
           VASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEG+AILM T+SQ+RTVRSLERD
Sbjct: 421 VASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLERD 480

Query: 481 VGCKFEFANPPAIEQVLESSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAAALA 540
           VGC FEF +PP +  +LESSA+QVV TL GVHP+SI++F+ TAQKL +E+G  ALAAALA
Sbjct: 481 VGCHFEFISPPTVGDLLESSADQVVATLNGVHPDSIKFFSATAQKLYEEKGTDALAAALA 540

Query: 541 QLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEIGKI 600
            LSGFS PPSSRSL++HE+GWVTLQL RDP+ +RGFLSARSVTGFLSD+Y  AADE+GKI
Sbjct: 541 HLSGFSQPPSSRSLLSHEKGWVTLQLIRDPTNARGFLSARSVTGFLSDLYRTAADEVGKI 600

Query: 601 HLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQDDGPPSDNYGRFSGRE 660
            LIAD+RI GAVFDLPEEIAKELL K++PEGN++  +TKLPPLQDDGP SDNYGRFS R+
Sbjct: 601 FLIADDRIQGAVFDLPEEIAKELLEKDVPEGNSLSMITKLPPLQDDGPSSDNYGRFSSRD 660

Query: 661 RNSRNSSRDRRGFRTSRGWGSSRDSDA---DGDMFSRNRSFRTN--SSKGRNFRSSGDDW 720
           R  R      RG R  RG GSSR  D+   D D  SR  S   +  S  G + R S DDW
Sbjct: 661 RMPRGGG-GSRGSRGGRG-GSSRGRDSWGGDDDRGSRRSSGGGSSWSRGGSSSRGSSDDW 720

Query: 721 LIGGRRSSRSSSVDR---FGGSCFNCGRMGHRASECPDK 749
           LIGGR SS S +  R   FGGSCF CG+ GHRA++CPDK
Sbjct: 721 LIGGRSSSSSRAPSRERSFGGSCFICGKSGHRATDCPDK 745

[Close]

BLAST of Cmc02g0037241 vs. ExPASy Swiss-Prot
Match: Q0DM51 (DEAD-box ATP-dependent RNA helicase 3, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0827700 PE=2 SV=2)

HSP 1 Score: 941.0 bits (2431), Expect = 8.0e-273
Identity = 512/760 (67.37%), Postives = 592/760 (77.89%), Query Frame = 0


Query: 28  ASPTPSLSFVDKSHLIALKVQTCFSGSSRRNLSG---FTSSAIATPNSILSEEAFRSLDG 87
           ++P+ S +        +L+++  F   + R   G     + AIA+PNS+LSE AF+ L  
Sbjct: 13  SNPSASAAAAGAGAAPSLRLRAAFRCWALRRAGGGRWAAAGAIASPNSVLSEHAFKRLQL 72

Query: 88  FSKDPLDDDLI---DPEPNSSL-AFSADDDELAISKLNLPQRLTDALQKRGITHLFPIQR 147
             ++  +++     D E   ++     D+DELAI++L LP++L   L+KRGITHLFPIQR
Sbjct: 73  SDEEEEEEEGAYGSDEEGVEAVGGGEGDEDELAIARLGLPEQLVSTLEKRGITHLFPIQR 132

Query: 148 AVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDESRSLRRRSRLPRVLVLTPTRE 207
           AVL+PAL+GRDLIARAKTGTGKTLAFGIP++K+L E+D+ RS+ RR R+PRVLVL PTRE
Sbjct: 133 AVLIPALDGRDLIARAKTGTGKTLAFGIPMIKQLMEEDDGRSV-RRGRIPRVLVLAPTRE 192

Query: 208 LAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDVVVGTPGRLIDLINGNSLNLG 267
           LAKQVEKEIKESAP L+TVCVYGGVSY  QQNALSRGVDVVVGTPGR+IDLING SL LG
Sbjct: 193 LAKQVEKEIKESAPKLSTVCVYGGVSYNVQQNALSRGVDVVVGTPGRIIDLINGGSLQLG 252

Query: 268 EVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSATMPTWVKKLARKYLDNPLTI 327
           EV+YLVLDEADQMLAVGFEEDVE IL++LP++RQ+MLFSATMP WVKKL+R+YL+NPLTI
Sbjct: 253 EVKYLVLDEADQMLAVGFEEDVETILQQLPAERQSMLFSATMPGWVKKLSRRYLNNPLTI 312

Query: 328 DLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKGGKTIVFTQTKRDADEVSLAL 387
           DLVGDQDEKLAEGIKL+AI  T+TSK+T+L DL+TVYAKGGKTIVFT+TKRDADEVSLAL
Sbjct: 313 DLVGDQDEKLAEGIKLYAIPLTSTSKRTVLSDLITVYAKGGKTIVFTKTKRDADEVSLAL 372

Query: 388 ANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDP 447
            NSI SEALHGDISQHQRERTLNGFRQGKFTVLVATDVA+RGLDIPNVDL+IHYELPNDP
Sbjct: 373 TNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDP 432

Query: 448 ETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGCKFEFANPPAIEQVLESSAEQ 507
           ETFVHRSGRTGRAGK GTAILMFTNSQRRTVRSLERDVGC+F+F +PPAIE VLESSAE 
Sbjct: 433 ETFVHRSGRTGRAGKAGTAILMFTNSQRRTVRSLERDVGCRFDFISPPAIEDVLESSAEH 492

Query: 508 VVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAAALAQLSGFSHPPSSRSLINHEQGWVT 567
           V+ TLRGVH ESI+YF P A++L +E GP ALA+ALA LSGFS PPSSRSLI+HEQGWVT
Sbjct: 493 VIATLRGVHTESIQYFIPAAERLQEELGPNALASALAHLSGFSQPPSSRSLISHEQGWVT 552

Query: 568 LQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEIGKIHLIADERINGAVFDLPEEIAKEL 627
           LQLTRDP Y RGF S RSVTGFLSD+ S AADE+GKI L ADE++ GAVFDLPEEIA++L
Sbjct: 553 LQLTRDPGYGRGFFSPRSVTGFLSDVSSAAADEVGKIFLTADEKVQGAVFDLPEEIARDL 612

Query: 628 LNKELPEGNTILKVTKLPPLQDDGPPSDNYGRFSGRERNSRNSSRDRRGFRTSRGWGSSR 687
           L+ ELP GNTI KVTKLP LQDDGP +D+YGRFS  +R  RN  R R G   SRG     
Sbjct: 613 LSMELPPGNTITKVTKLPALQDDGPATDSYGRFSNSDRGFRN-RRSRGG--GSRGGRGGW 672

Query: 688 DSDADGDMFSRNRSFRTNSSKGRNFRSSGDDW----LIGGRRSSRSSSVD---------- 747
           DSD + D F R          GR+FRS  D W      GGRRS+RSSS            
Sbjct: 673 DSDGE-DRFRRG---------GRSFRSDNDSWSDDDFGGGRRSNRSSSFGGRGSSYGSRS 732

Query: 748 ------------------RFGGSCFNCGRMGHRASECPDK 749
                              F G+CFNCG  GHRAS+CP+K
Sbjct: 733 SSSFGGRSSSFGSRDSSRSFSGACFNCGESGHRASDCPNK 758

[Close]

BLAST of Cmc02g0037241 vs. ExPASy Swiss-Prot
Match: A0A1D6GDY8 (DEAD-box ATP-dependent RNA helicase 3A, chloroplastic OS=Zea mays OX=4577 GN=RH3A PE=3 SV=1)

HSP 1 Score: 922.2 bits (2382), Expect = 3.9e-267
Identity = 496/716 (69.27%), Postives = 568/716 (79.33%), Query Frame = 0


Query: 64  SSAIATPNSILSEEAFRSLDGFSKDPLDDDLIDPEPNSSLAFSADDDELAISKLNLPQRL 123
           ++A+A+PNS+LSE AF+ L   S D  +D+      ++   F  D++ELAI++L LP  L
Sbjct: 42  AAAVASPNSVLSEHAFKRLQLGSDD--EDEEGPYGSDADEGFQGDEEELAIARLGLPDEL 101

Query: 124 TDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDESRSL 183
              L+KRGITHLFPIQRAVL+PAL GRDLIARAKTGTGKTLAFGIP++K+L E D+ RS 
Sbjct: 102 VATLEKRGITHLFPIQRAVLIPALGGRDLIARAKTGTGKTLAFGIPMIKQLMEQDDGRS- 161

Query: 184 RRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDVVVG 243
            RR R PRVLVL PTRELAKQVEKEIKESAP L TVCVYGGVSY  QQNALSRGVDVVVG
Sbjct: 162 TRRGRTPRVLVLAPTRELAKQVEKEIKESAPKLGTVCVYGGVSYNVQQNALSRGVDVVVG 221

Query: 244 TPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSATMP 303
           TPGR+IDLING SL LGEV+YLVLDEADQMLAVGFEEDVE IL++LP+ RQ+MLFSATMP
Sbjct: 222 TPGRIIDLINGGSLQLGEVQYLVLDEADQMLAVGFEEDVETILQQLPADRQSMLFSATMP 281

Query: 304 TWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKGGKT 363
           +WVKKL+R+YL+NPLTIDLVGDQDEKLAEGIKLHAI  TATSK+TIL DL+TVYAKGGKT
Sbjct: 282 SWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLHAIPLTATSKRTILSDLITVYAKGGKT 341

Query: 364 IVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGL 423
           IVFT+TK+DADEVSLAL  SI SEALHGDISQHQRERTLNGFRQGKFTVLVATDVA+RGL
Sbjct: 342 IVFTRTKKDADEVSLALTTSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGL 401

Query: 424 DIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGCKFE 483
           DIPNVDL+IHYELPNDPETFVHRSGRTGRAGK GTAILMFT+SQ+RTV SLERDVGCKFE
Sbjct: 402 DIPNVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTSSQKRTVMSLERDVGCKFE 461

Query: 484 FANPPAIEQVLESSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAAALAQLSGFS 543
           F +PP+IE+VLESSAE V+ TLRGVHPES +YF   A+KL +E GP ALA+ALA LSGFS
Sbjct: 462 FISPPSIEEVLESSAEHVIATLRGVHPESTQYFLGAAEKLTEELGPHALASALAHLSGFS 521

Query: 544 HPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEIGKIHLIADE 603
            PPSSRSLI++EQGWVTLQLTR+P Y RGF S RSVTGFLSD+ S AADE+GKI++ ADE
Sbjct: 522 QPPSSRSLISYEQGWVTLQLTREPGYGRGFFSPRSVTGFLSDVCSAAADEVGKIYITADE 581

Query: 604 RINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQDDGPPSDNYGRFSGRERNSRNS 663
            + GAVFDLPEEIAK+LL  E+P GNT+ K++KLP LQDD P +D+YGRFS  +R SRN 
Sbjct: 582 NVQGAVFDLPEEIAKDLLTMEVPPGNTLTKISKLPALQDDSPATDSYGRFS-NDRGSRN- 641

Query: 664 SRDRRGFRTSRGWGSSRDSDADGDMFSRNRSFRTNSSKGRNFRSSGDDWLIGGRRSSRSS 723
            R  RG   SRG G   D+D++       RS R++     N   S DDW  GGR+S+RSS
Sbjct: 642 -RRSRGGGASRGRG-GWDTDSEDRYRRGGRSLRSD-----NDSWSDDDWSGGGRKSNRSS 701

Query: 724 -------------------------------SVDRFGGSCFNCGRMGHRASECPDK 749
                                          S   F G+CFNCG  GHRAS+CP+K
Sbjct: 702 SSFGGRSSSYGSRGSPSPSFGVRSSSLGGRESSRSFSGACFNCGESGHRASDCPNK 745

[Close]

BLAST of Cmc02g0037241 vs. ExPASy Swiss-Prot
Match: A0A1D6LAB7 (DEAD-box ATP-dependent RNA helicase 3B, chloroplastic OS=Zea mays OX=4577 GN=RH3B PE=2 SV=1)

HSP 1 Score: 921.0 bits (2379), Expect = 8.6e-267
Identity = 497/716 (69.41%), Postives = 568/716 (79.33%), Query Frame = 0


Query: 64  SSAIATPNSILSEEAFRSLDGFSKDPLDDDLIDPEPNSSL-AFSADDDELAISKLNLPQR 123
           + A+A+PNS+LSE AF+ L   S D   +     + +    A   D++ELAI++L LP  
Sbjct: 39  AGALASPNSVLSEHAFKRLQLGSDDEDGEGPYGSDADEGFEAGEGDNEELAIARLGLPDE 98

Query: 124 LTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDESRS 183
           L   L+KRGITHLFPIQRAVL+PALEGRDLIARAKTGTGKTLAFGIP++K+L E D+ R 
Sbjct: 99  LVATLEKRGITHLFPIQRAVLIPALEGRDLIARAKTGTGKTLAFGIPMIKQLIEQDDGR- 158

Query: 184 LRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDVVV 243
           + RR R PRVLVL PTRELAKQVEKEIKESAP L TVCVYGGVSY  QQNALSRGVDVVV
Sbjct: 159 ITRRGRTPRVLVLAPTRELAKQVEKEIKESAPKLGTVCVYGGVSYNVQQNALSRGVDVVV 218

Query: 244 GTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSATM 303
           GTPGR+IDLING SL LGEV+YLVLDEADQMLAVGFEEDVE IL++LP+ RQ+MLFSATM
Sbjct: 219 GTPGRIIDLINGGSLQLGEVQYLVLDEADQMLAVGFEEDVETILQQLPAGRQSMLFSATM 278

Query: 304 PTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKGGK 363
           P+WVKKL+R+YL+NPLTIDLVGDQDEKLAEGIKL+AI  T TSK+T+L DL+TVYAKGGK
Sbjct: 279 PSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAIPLTTTSKRTVLSDLITVYAKGGK 338

Query: 364 TIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRG 423
           TIVFT+TK+DADEVSLAL NSI SEALHGDISQHQRERTLNGFRQGKFTVLVATDVA+RG
Sbjct: 339 TIVFTRTKKDADEVSLALTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARG 398

Query: 424 LDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGCKF 483
           LDIPNVDL+IHYELPNDPETFVHRSGRTGRAGK GTAILMFT+SQ+RTV+SLERDVGC F
Sbjct: 399 LDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTSSQKRTVKSLERDVGCNF 458

Query: 484 EFANPPAIEQVLESSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAAALAQLSGF 543
           EF +PP+IE+VLESSAE V+ TLRGVHPES +YF   A+KL +E GP ALA+ALA LSGF
Sbjct: 459 EFISPPSIEEVLESSAEHVIATLRGVHPESTKYFLGAAEKLTEELGPHALASALAHLSGF 518

Query: 544 SHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEIGKIHLIAD 603
           S PPSSRSLI+HEQGWVTLQLTR+  + RGF S RSVTGFLSD+ S AADE+GKI+L AD
Sbjct: 519 SQPPSSRSLISHEQGWVTLQLTREQGFGRGFFSPRSVTGFLSDVCSAAADEVGKIYLTAD 578

Query: 604 ERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQDDGPPSDNYGRFSGRERNSRN 663
           E + GAVFDLPEEIAK+LL  ELP GNT+ K++KLP LQDDGP +D+YGRFS  +R SRN
Sbjct: 579 ENVQGAVFDLPEEIAKDLLTMELPPGNTLTKISKLPALQDDGPATDSYGRFS-NDRGSRN 638

Query: 664 SSRDRRGFRTSRGWGSSRDSDADG-DMFSR-NRSFRTNSSKGRNFRSSGDDWLIGGRRSS 723
           + R R G   SRG G     D DG D F R  RS R++     N   S DDW  GGR+S+
Sbjct: 639 NRRSRGG-GASRGRGG---WDTDGEDRFRRGGRSLRSD-----NDSWSDDDWSGGGRKSN 698

Query: 724 RSSSVD----------------------------RFGGSCFNCGRMGHRASECPDK 749
           RSSS                               F G+CFNCG  GHRA++CP+K
Sbjct: 699 RSSSFGSRSSSYSSRGSPSFGGRSSSFGGRESNRSFSGACFNCGESGHRATDCPNK 743

[Close]

BLAST of Cmc02g0037241 vs. ExPASy Swiss-Prot
Match: Q9LUW5 (DEAD-box ATP-dependent RNA helicase 53, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RH53 PE=1 SV=1)

HSP 1 Score: 471.5 bits (1212), Expect = 1.8e-131
Identity = 239/396 (60.35%), Postives = 301/396 (76.01%), Query Frame = 0


Query: 106 SADDDELAISKLNLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLA 165
           S   D LAIS+L +   +  AL  +GI  LFPIQ+AVL PA+EGRD+I RA+TGTGKTLA
Sbjct: 98  SVGGDGLAISELGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLA 157

Query: 166 FGIPILKKLTEDDESRSLRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGV 225
           FGIPI+ K+ + +       R R P  LVL PTRELA+QVEKE +ESAP L+T+C+YGG 
Sbjct: 158 FGIPIIDKIIKYNAKHG---RGRNPLCLVLAPTRELARQVEKEFRESAPSLDTICLYGGT 217

Query: 226 SYVTQQNALSRGVDVVVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVI 285
               Q   L  GVDV VGTPGR+IDL+   +LNL EV+++VLDEADQML VGF EDVE+I
Sbjct: 218 PIGQQMRQLDYGVDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEII 277

Query: 286 LEKLPSQRQNMLFSATMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATS 345
           LEKLP +RQ+M+FSATMP+W++ L +KYL+NPLT+DLVGD D+KLA+GI  ++I+  +  
Sbjct: 278 LEKLPEKRQSMMFSATMPSWIRSLTKKYLNNPLTVDLVGDSDQKLADGITTYSIIADSYG 337

Query: 346 KQTILRDLVTVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGF 405
           + +I+  LVT +AKGGK IVFTQTKRDAD +S ALA S   EALHGDISQ QRERTL GF
Sbjct: 338 RASIIGPLVTEHAKGGKCIVFTQTKRDADRLSYALARSFKCEALHGDISQSQRERTLAGF 397

Query: 406 RQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTN 465
           R G F +LVATDVA+RGLD+PNVDL+IHYELPN+ ETFVHR+GRTGRAGK+G+AIL+++ 
Sbjct: 398 RDGHFNILVATDVAARGLDVPNVDLIIHYELPNNTETFVHRTGRTGRAGKKGSAILIYSQ 457

Query: 466 SQRRTVRSLERDVGCKFEFANPPAIEQVLESSAEQV 502
            Q R V+ +ER+VG +F      A+E+   S  E +
Sbjct: 458 DQSRAVKIIEREVGSRFTELPSIAVERGSASMFEGI 490

[Close]

BLAST of Cmc02g0037241 vs. ExPASy TrEMBL
Match: A0A1S3BQ06 (RNA helicase OS=Cucumis melo OX=3656 GN=LOC103492086 PE=3 SV=1)

HSP 1 Score: 1446.4 bits (3743), Expect = 0.0e+00
Identity = 746/748 (99.73%), Postives = 747/748 (99.87%), Query Frame = 0


Query: 1   MASLLGVTAIHHAPNLDLYRRMGTTATASPTPSLSFVDKSHLIALKVQTCFSGSSRRNLS 60
           MASLLGVTAIHHAPNLDLYRRMGTTATASPTPSLSFVDKSHLIALKVQTCFSGSSRRNLS
Sbjct: 1   MASLLGVTAIHHAPNLDLYRRMGTTATASPTPSLSFVDKSHLIALKVQTCFSGSSRRNLS 60

Query: 61  GFTSSAIATPNSILSEEAFRSLDGFSKDPLDDDLIDPEPNSSLAFSADDDELAISKLNLP 120
           GFTSSAIATPNSILSEEAFRSLDGFSKDPLDD+LIDPEPNSSLAFSADDDELAISKLNLP
Sbjct: 61  GFTSSAIATPNSILSEEAFRSLDGFSKDPLDDNLIDPEPNSSLAFSADDDELAISKLNLP 120

Query: 121 QRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDES 180
           QRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDES
Sbjct: 121 QRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDES 180

Query: 181 RSLRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDV 240
           RSLRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDV
Sbjct: 181 RSLRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDV 240

Query: 241 VVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSA 300
           VVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSA
Sbjct: 241 VVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSA 300

Query: 301 TMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKG 360
           TMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKG
Sbjct: 301 TMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKG 360

Query: 361 GKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAS 420
           GKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAS
Sbjct: 361 GKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAS 420

Query: 421 RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGC 480
           RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGC
Sbjct: 421 RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGC 480

Query: 481 KFEFANPPAIEQVLESSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAAALAQLS 540
           KFEFANPPAIEQVLESSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAAALAQLS
Sbjct: 481 KFEFANPPAIEQVLESSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAAALAQLS 540

Query: 541 GFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEIGKIHLI 600
           GFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEIGKIHLI
Sbjct: 541 GFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEIGKIHLI 600

Query: 601 ADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQDDGPPSDNYGRFSGRERNS 660
           ADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQDDGPPSDNYGRFSGRERNS
Sbjct: 601 ADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQDDGPPSDNYGRFSGRERNS 660

Query: 661 RNSSRDRRGFRTSRGWGSSRDSDADGDMFSRNRSFRTNSSKGRNFRSSGDDWLIGGRRSS 720
           RNSSRDRRGFRTSRGWGSSRDSD DGDMFSRNRSFRTNSSKGRNFRSSGDDWLIGGRRSS
Sbjct: 661 RNSSRDRRGFRTSRGWGSSRDSDDDGDMFSRNRSFRTNSSKGRNFRSSGDDWLIGGRRSS 720

Query: 721 RSSSVDRFGGSCFNCGRMGHRASECPDK 749
           RSSSVDRFGGSCFNCGRMGHRASECPDK
Sbjct: 721 RSSSVDRFGGSCFNCGRMGHRASECPDK 748

[Close]

BLAST of Cmc02g0037241 vs. ExPASy TrEMBL
Match: A0A0A0M1E9 (RNA helicase OS=Cucumis sativus OX=3659 GN=Csa_1G560830 PE=3 SV=1)

HSP 1 Score: 1411.0 bits (3651), Expect = 0.0e+00
Identity = 725/748 (96.93%), Postives = 740/748 (98.93%), Query Frame = 0


Query: 1   MASLLGVTAIHHAPNLDLYRRMGTTATASPTPSLSFVDKSHLIALKVQTCFSGSSRRNLS 60
           MASLLGVTAI HAPNLDLYRR GTTATASPTPSLSFVDKSHLIALKVQTCFSGSSRRNLS
Sbjct: 1   MASLLGVTAILHAPNLDLYRRTGTTATASPTPSLSFVDKSHLIALKVQTCFSGSSRRNLS 60

Query: 61  GFTSSAIATPNSILSEEAFRSLDGFSKDPLDDDLIDPEPNSSLAFSADDDELAISKLNLP 120
           GFTSSAIATPNSILSEEAFRS DGFS+D LDD+LIDPEPNSSLAF+ADDDELAISKLNLP
Sbjct: 61  GFTSSAIATPNSILSEEAFRSFDGFSEDSLDDNLIDPEPNSSLAFAADDDELAISKLNLP 120

Query: 121 QRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDES 180
           QRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDES
Sbjct: 121 QRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDES 180

Query: 181 RSLRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDV 240
           RSLRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSY+TQQNALSRGVDV
Sbjct: 181 RSLRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYITQQNALSRGVDV 240

Query: 241 VVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSA 300
           VVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSA
Sbjct: 241 VVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSA 300

Query: 301 TMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKG 360
           TMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKG
Sbjct: 301 TMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKG 360

Query: 361 GKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAS 420
           GKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAS
Sbjct: 361 GKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAS 420

Query: 421 RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGC 480
           RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGC
Sbjct: 421 RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGC 480

Query: 481 KFEFANPPAIEQVLESSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAAALAQLS 540
           KFEFANPP +E+VL+SSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQG GALAAALAQLS
Sbjct: 481 KFEFANPPGMEEVLKSSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGLGALAAALAQLS 540

Query: 541 GFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEIGKIHLI 600
           GF+HPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSD+YSPAADEIGKIHLI
Sbjct: 541 GFTHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDVYSPAADEIGKIHLI 600

Query: 601 ADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQDDGPPSDNYGRFSGRERNS 660
           ADERINGAVFDLPEEIAKELLNKELPEGNTILK+TKLPPLQDDGPPSDNYGRFSGRER+S
Sbjct: 601 ADERINGAVFDLPEEIAKELLNKELPEGNTILKITKLPPLQDDGPPSDNYGRFSGRERSS 660

Query: 661 RNSSRDRRGFRTSRGWGSSRDSDADGDMFSRNRSFRTNSSKGRNFRSSGDDWLIGGRRSS 720
           RNSSRDRRG +TSRGWGSSRDSD +GD+FSRNRSFRTN+SKGRNFRSSGDDWLIGGRRSS
Sbjct: 661 RNSSRDRRGLKTSRGWGSSRDSDDNGDIFSRNRSFRTNNSKGRNFRSSGDDWLIGGRRSS 720

Query: 721 RSSSVDRFGGSCFNCGRMGHRASECPDK 749
           RSSSVDRFGGSCFNCGRMGHRASECPDK
Sbjct: 721 RSSSVDRFGGSCFNCGRMGHRASECPDK 748

[Close]

BLAST of Cmc02g0037241 vs. ExPASy TrEMBL
Match: A0A5D3CJA2 (RNA helicase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G004730 PE=3 SV=1)

HSP 1 Score: 1398.3 bits (3618), Expect = 0.0e+00
Identity = 725/727 (99.72%), Postives = 726/727 (99.86%), Query Frame = 0


Query: 1   MASLLGVTAIHHAPNLDLYRRMGTTATASPTPSLSFVDKSHLIALKVQTCFSGSSRRNLS 60
           MASLLGVTAIHHAPNLDLYRRMGTTATASPTPSLSFVDKSHLIALKVQTCFSGSSRRNLS
Sbjct: 1   MASLLGVTAIHHAPNLDLYRRMGTTATASPTPSLSFVDKSHLIALKVQTCFSGSSRRNLS 60

Query: 61  GFTSSAIATPNSILSEEAFRSLDGFSKDPLDDDLIDPEPNSSLAFSADDDELAISKLNLP 120
           GFTSSAIATPNSILSEEAFRSLDGFSKDPLDD+LIDPEPNSSLAFSADDDELAISKLNLP
Sbjct: 61  GFTSSAIATPNSILSEEAFRSLDGFSKDPLDDNLIDPEPNSSLAFSADDDELAISKLNLP 120

Query: 121 QRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDES 180
           QRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDES
Sbjct: 121 QRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDES 180

Query: 181 RSLRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDV 240
           RSLRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDV
Sbjct: 181 RSLRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDV 240

Query: 241 VVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSA 300
           VVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSA
Sbjct: 241 VVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSA 300

Query: 301 TMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKG 360
           TMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKG
Sbjct: 301 TMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKG 360

Query: 361 GKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAS 420
           GKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAS
Sbjct: 361 GKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAS 420

Query: 421 RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGC 480
           RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGC
Sbjct: 421 RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGC 480

Query: 481 KFEFANPPAIEQVLESSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAAALAQLS 540
           KFEFANPPAIEQVLESSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAAALAQLS
Sbjct: 481 KFEFANPPAIEQVLESSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAAALAQLS 540

Query: 541 GFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEIGKIHLI 600
           GFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEIGKIHLI
Sbjct: 541 GFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEIGKIHLI 600

Query: 601 ADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQDDGPPSDNYGRFSGRERNS 660
           ADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQDDGPPSDNYGRFSGRERNS
Sbjct: 601 ADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQDDGPPSDNYGRFSGRERNS 660

Query: 661 RNSSRDRRGFRTSRGWGSSRDSDADGDMFSRNRSFRTNSSKGRNFRSSGDDWLIGGRRSS 720
           RNSSRDRRGFRTSRGWGSSRDSD DGDMFSRNRSFRTNSSKGRNFRSSGDDWLIGGRRSS
Sbjct: 661 RNSSRDRRGFRTSRGWGSSRDSDDDGDMFSRNRSFRTNSSKGRNFRSSGDDWLIGGRRSS 720

Query: 721 RSSSVDR 728
           RSSSVDR
Sbjct: 721 RSSSVDR 727

[Close]

BLAST of Cmc02g0037241 vs. ExPASy TrEMBL
Match: A0A6J1DUC8 (RNA helicase OS=Momordica charantia OX=3673 GN=LOC111024523 PE=3 SV=1)

HSP 1 Score: 1326.2 bits (3431), Expect = 0.0e+00
Identity = 691/765 (90.33%), Postives = 719/765 (93.99%), Query Frame = 0


Query: 1   MASLLGVTAIHHAPNLDLYRRMGTTATASPTPSLSFVDKSHLIALKVQTCFSGSSRRNL- 60
           MAS+LGVTAIHHAPNLD+YRRMGT AT SPTPSLSF DKSH+ A K QT FS  SRRNL 
Sbjct: 1   MASILGVTAIHHAPNLDIYRRMGTAATPSPTPSLSFADKSHINASKAQTSFSSGSRRNLA 60

Query: 61  -----------SGFTSSAIATPNSILSEEAFRSLDGFSKDPLDDDLIDPEPNSSLAFS-- 120
                      SGF+SSAIATPNSILSEEAF+SLDGFSK    DD ID +PNSSL FS  
Sbjct: 61  FSDGSSAGTFKSGFSSSAIATPNSILSEEAFKSLDGFSK----DDFIDSQPNSSLGFSAD 120

Query: 121 --ADDDELAISKLNLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTL 180
             AD+DELAISKL LPQRLT++L+KRGIT LFPIQRAVLVPALEGRDLIARAKTGTGKTL
Sbjct: 121 SPADEDELAISKLGLPQRLTESLEKRGITSLFPIQRAVLVPALEGRDLIARAKTGTGKTL 180

Query: 181 AFGIPILKKLTEDDESRSLRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGG 240
           AFGIPI+K+LTEDDE RS RRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGG
Sbjct: 181 AFGIPIIKRLTEDDELRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGG 240

Query: 241 VSYVTQQNALSRGVDVVVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEV 300
           VSYVTQQNAL+RGVDVVVGTPGR+IDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEV
Sbjct: 241 VSYVTQQNALTRGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEV 300

Query: 301 ILEKLPSQRQNMLFSATMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTAT 360
           IL+KLP+QRQNMLFSATMPTWVKKLARKYL+NPLTIDLVG QDEKLAEGIKL+AILTTAT
Sbjct: 301 ILQKLPTQRQNMLFSATMPTWVKKLARKYLENPLTIDLVGXQDEKLAEGIKLYAILTTAT 360

Query: 361 SKQTILRDLVTVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNG 420
           SKQTILRDLVTVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNG
Sbjct: 361 SKQTILRDLVTVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNG 420

Query: 421 FRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFT 480
           FRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEG+AILMFT
Sbjct: 421 FRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMFT 480

Query: 481 NSQRRTVRSLERDVGCKFEFANPPAIEQVLESSAEQVVVTLRGVHPESIEYFTPTAQKLI 540
           NSQRRTVRSLERDVGCKFEFANPPAIE VLESSAEQVV TLRGVHPESIE+FTPTAQKLI
Sbjct: 481 NSQRRTVRSLERDVGCKFEFANPPAIEDVLESSAEQVVATLRGVHPESIEFFTPTAQKLI 540

Query: 541 DEQGPGALAAALAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLS 600
           DEQG GALAAALAQLSGFSHPPSSRSLI+HEQGWVTLQLTRDPSYSRGFLSARSVTGFLS
Sbjct: 541 DEQGAGALAAALAQLSGFSHPPSSRSLISHEQGWVTLQLTRDPSYSRGFLSARSVTGFLS 600

Query: 601 DIYSPAADEIGKIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQDDG 660
           DIYSPAADE+GKIHLIADERI+GAVFDLPEEIAKELLNK LPEGNTILKVTKLPPLQDDG
Sbjct: 601 DIYSPAADEVGKIHLIADERIHGAVFDLPEEIAKELLNKPLPEGNTILKVTKLPPLQDDG 660

Query: 661 PPSDNYGRFSGRERNSRNSSRDRRGFRTSRGWGSSRDSDADGDMFSRNRSFRT-NSSKGR 720
           PPSDNYGRFSGRERNSRN+SRDRRGFRTSRGWGS RDSD DGD+FSRNRSFRT NSS+ R
Sbjct: 661 PPSDNYGRFSGRERNSRNNSRDRRGFRTSRGWGSGRDSDDDGDLFSRNRSFRTNNSSRSR 720

Query: 721 NFRSSGDDWLIGGRRSSRSSSVDRFGGSCFNCGRMGHRASECPDK 749
           NF+SSGDDWLIGGRRSSRSSS+D FGGSCFNCGRMGHRASECPDK
Sbjct: 721 NFKSSGDDWLIGGRRSSRSSSMDGFGGSCFNCGRMGHRASECPDK 761

[Close]

BLAST of Cmc02g0037241 vs. ExPASy TrEMBL
Match: A0A6J1EUB8 (RNA helicase OS=Cucurbita moschata OX=3662 GN=LOC111437838 PE=3 SV=1)

HSP 1 Score: 1321.2 bits (3418), Expect = 0.0e+00
Identity = 692/757 (91.41%), Postives = 722/757 (95.38%), Query Frame = 0


Query: 1   MASLLGVTAIHHAPNLDLYRRMGT----TATASPTPSLSFVDKSHLIALKVQTCF--SGS 60
           MAS+LGVTAIHHAPNLD+YRRMGT    TAT S TPSLSF DKSH  +LK  T F  S S
Sbjct: 1   MASILGVTAIHHAPNLDMYRRMGTPATATATVSSTPSLSFADKSHFNSLKALTSFLSSSS 60

Query: 61  SRRNLSGFTSSAIATPNSILSEEAFRSLDGFSKDPLDDD-LIDPEPNSSLAFSADDDELA 120
           SRRN SGF+SSAIATPNSILSEEAFRSLDGFSKD LDDD LID E NSSLAFS DDDELA
Sbjct: 61  SRRNFSGFSSSAIATPNSILSEEAFRSLDGFSKDSLDDDGLIDSEANSSLAFS-DDDELA 120

Query: 121 ISKLNLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKK 180
           ISKL LPQRL+DAL+KRGIT LF IQRAVLVPALEGRDLIARAKTGTGKTLAFGIPI+KK
Sbjct: 121 ISKLGLPQRLSDALEKRGITQLFAIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPIIKK 180

Query: 181 LTEDDESRSLRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNA 240
           +TEDDE +S RRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQ+A
Sbjct: 181 ITEDDELKSPRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQSA 240

Query: 241 LSRGVDVVVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQR 300
           LSRGVDVVVGTPGR+IDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQR
Sbjct: 241 LSRGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQR 300

Query: 301 QNMLFSATMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDL 360
           QNMLFSATMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKL+AILTTATSKQTILRDL
Sbjct: 301 QNMLFSATMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLYAILTTATSKQTILRDL 360

Query: 361 VTVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVL 420
           VTVYAKGGKTIVFT+TKRDADEVSLALAN+ITSEALHGDISQHQRERTLNGFRQGKFTVL
Sbjct: 361 VTVYAKGGKTIVFTRTKRDADEVSLALANTITSEALHGDISQHQRERTLNGFRQGKFTVL 420

Query: 421 VATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRS 480
           VATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTN+QRRTVRS
Sbjct: 421 VATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNNQRRTVRS 480

Query: 481 LERDVGCKFEFANPPAIEQVLESSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGPGALA 540
           LERDVGCKFEFANPP IE+VLESSAEQVVVTLRGVHPESIE+FTPTAQKLIDEQG GALA
Sbjct: 481 LERDVGCKFEFANPPGIEKVLESSAEQVVVTLRGVHPESIEFFTPTAQKLIDEQGAGALA 540

Query: 541 AALAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADE 600
           AALAQLSGFS PPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSD+YSPAADE
Sbjct: 541 AALAQLSGFSRPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDVYSPAADE 600

Query: 601 IGKIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQDDGPPSDNYGRF 660
           +GKIHLIADERINGAVFDLPEEIAKELLNK+LPEGNT+LK+TKLPPLQDDGPPSD+YGRF
Sbjct: 601 VGKIHLIADERINGAVFDLPEEIAKELLNKDLPEGNTLLKITKLPPLQDDGPPSDSYGRF 660

Query: 661 SGRERNSRNSSRDRRGFRTSRGW-GSSRDSDADGDMFSRNRSFRTNSSKGRNFRSSGDDW 720
           SGRER+SRNSSRDRRG RTSRGW GSSRDSD DGD+FSRNR FR+NSS+GRNF+SSGDDW
Sbjct: 661 SGRERSSRNSSRDRRGSRTSRGWGGSSRDSDDDGDLFSRNRGFRSNSSRGRNFKSSGDDW 720

Query: 721 LIGG--RRSSRSSSVDRFGGSCFNCGRMGHRASECPD 748
           LIGG  RRSSRSSS+DRFGGSCFNCGRMGHRASECP+
Sbjct: 721 LIGGGSRRSSRSSSMDRFGGSCFNCGRMGHRASECPN 756

[Close]

BLAST of Cmc02g0037241 vs. TAIR 10
Match: AT5G26742.1 (DEAD box RNA helicase (RH3) )

HSP 1 Score: 972.2 bits (2512), Expect = 2.3e-283
Identity = 535/758 (70.58%), Postives = 617/758 (81.40%), Query Frame = 0


Query: 1   MASLLGVTAIHHAPNLDLYRRMGTTATASPTPSLSFVDKSHLIALKVQTCFSGSSRR--N 60
           MAS +GV +++  P+L++ +    +   S   SLS +DK     L +       +RR  +
Sbjct: 1   MASTVGVPSLYQVPHLEISK--PNSKKRSNCLSLS-LDKPFFTPLSLVR----RTRRIHS 60

Query: 61  LSGFTSSAIATPNSILSEEAFRSLDGFSKDPLDDDLIDPEPNSSLAFSADDDELAISKLN 120
            S    SA+ATPNS+LSEEAF+SL G S    D D  D + +++   + D +ELAISKL+
Sbjct: 61  SSLLVPSAVATPNSVLSEEAFKSL-GLS----DHDEYDLDGDNNNVEADDGEELAISKLS 120

Query: 121 LPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTED- 180
           LPQRL ++L+KRGITHLFPIQRAVLVPAL+GRD+IARAKTGTGKTLAFGIPI+K+LTE+ 
Sbjct: 121 LPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEA 180

Query: 181 DESRSLRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRG 240
            +  + RR  RLP+ LVL PTRELAKQVEKEIKESAPYL+TVCVYGGVSY  QQ+AL+RG
Sbjct: 181 GDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYTIQQSALTRG 240

Query: 241 VDVVVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNML 300
           VDVVVGTPGR+IDLI G SL LGEVEYLVLDEADQMLAVGFEE VE ILE LP++RQ+ML
Sbjct: 241 VDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQSML 300

Query: 301 FSATMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVY 360
           FSATMPTWVKKLARKYLDNPL IDLVGDQDEKLAEGIKL+AI TT+TSK+TIL DL+TVY
Sbjct: 301 FSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLITVY 360

Query: 361 AKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATD 420
           AKGGKTIVFTQTKRDADEVSLAL+NSI +EALHGDISQHQRERTLN FRQGKFTVLVATD
Sbjct: 361 AKGGKTIVFTQTKRDADEVSLALSNSIATEALHGDISQHQRERTLNAFRQGKFTVLVATD 420

Query: 421 VASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERD 480
           VASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEG+AILM T+SQ+RTVRSLERD
Sbjct: 421 VASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLERD 480

Query: 481 VGCKFEFANPPAIEQVLESSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAAALA 540
           VGC FEF +PP +  +LESSA+QVV TL GVHP+SI++F+ TAQKL +E+G  ALAAALA
Sbjct: 481 VGCHFEFISPPTVGDLLESSADQVVATLNGVHPDSIKFFSATAQKLYEEKGTDALAAALA 540

Query: 541 QLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEIGKI 600
            LSGFS PPSSRSL++HE+GWVTLQL RDP+ +RGFLSARSVTGFLSD+Y  AADE+GKI
Sbjct: 541 HLSGFSQPPSSRSLLSHEKGWVTLQLIRDPTNARGFLSARSVTGFLSDLYRTAADEVGKI 600

Query: 601 HLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQDDGPPSDNYGRFSGRE 660
            LIAD+RI GAVFDLPEEIAKELL K++PEGN++  +TKLPPLQDDGP SDNYGRFS R+
Sbjct: 601 FLIADDRIQGAVFDLPEEIAKELLEKDVPEGNSLSMITKLPPLQDDGPSSDNYGRFSSRD 660

Query: 661 RNSRNSSRDRRGFRTSRGWGSSRDSDA---DGDMFSRNRSFRTN--SSKGRNFRSSGDDW 720
           R  R      RG R  RG GSSR  D+   D D  SR  S   +  S  G + R S DDW
Sbjct: 661 RMPRGGG-GSRGSRGGRG-GSSRGRDSWGGDDDRGSRRSSGGGSSWSRGGSSSRGSSDDW 720

Query: 721 LIGGR--RSSRSSSVDRFGGSCFNCGRMGHRASECPDK 749
           LIGGR   SSR+ S + FGGSCF CG+ GHRA++CPDK
Sbjct: 721 LIGGRSSSSSRAPSRESFGGSCFICGKSGHRATDCPDK 744

[Close]

BLAST of Cmc02g0037241 vs. TAIR 10
Match: AT5G26742.2 (DEAD box RNA helicase (RH3) )

HSP 1 Score: 971.5 bits (2510), Expect = 3.9e-283
Identity = 535/759 (70.49%), Postives = 616/759 (81.16%), Query Frame = 0


Query: 1   MASLLGVTAIHHAPNLDLYRRMGTTATASPTPSLSFVDKSHLIALKVQTCFSGSSRR--N 60
           MAS +GV +++  P+L++ +    +   S   SLS +DK     L +       +RR  +
Sbjct: 1   MASTVGVPSLYQVPHLEISK--PNSKKRSNCLSLS-LDKPFFTPLSLVR----RTRRIHS 60

Query: 61  LSGFTSSAIATPNSILSEEAFRSLDGFSKDPLDDDLIDPEPNSSLAFSADDDELAISKLN 120
            S    SA+ATPNS+LSEEAF+SL G S    D D  D + +++   + D +ELAISKL+
Sbjct: 61  SSLLVPSAVATPNSVLSEEAFKSL-GLS----DHDEYDLDGDNNNVEADDGEELAISKLS 120

Query: 121 LPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTED- 180
           LPQRL ++L+KRGITHLFPIQRAVLVPAL+GRD+IARAKTGTGKTLAFGIPI+K+LTE+ 
Sbjct: 121 LPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEA 180

Query: 181 DESRSLRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRG 240
            +  + RR  RLP+ LVL PTRELAKQVEKEIKESAPYL+TVCVYGGVSY  QQ+AL+RG
Sbjct: 181 GDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYTIQQSALTRG 240

Query: 241 VDVVVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNML 300
           VDVVVGTPGR+IDLI G SL LGEVEYLVLDEADQMLAVGFEE VE ILE LP++RQ+ML
Sbjct: 241 VDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQSML 300

Query: 301 FSATMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVY 360
           FSATMPTWVKKLARKYLDNPL IDLVGDQDEKLAEGIKL+AI TT+TSK+TIL DL+TVY
Sbjct: 301 FSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLITVY 360

Query: 361 AKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATD 420
           AKGGKTIVFTQTKRDADEVSLAL+NSI +EALHGDISQHQRERTLN FRQGKFTVLVATD
Sbjct: 361 AKGGKTIVFTQTKRDADEVSLALSNSIATEALHGDISQHQRERTLNAFRQGKFTVLVATD 420

Query: 421 VASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERD 480
           VASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEG+AILM T+SQ+RTVRSLERD
Sbjct: 421 VASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLERD 480

Query: 481 VGCKFEFANPPAIEQVLESSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAAALA 540
           VGC FEF +PP +  +LESSA+QVV TL GVHP+SI++F+ TAQKL +E+G  ALAAALA
Sbjct: 481 VGCHFEFISPPTVGDLLESSADQVVATLNGVHPDSIKFFSATAQKLYEEKGTDALAAALA 540

Query: 541 QLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEIGKI 600
            LSGFS PPSSRSL++HE+GWVTLQL RDP+ +RGFLSARSVTGFLSD+Y  AADE+GKI
Sbjct: 541 HLSGFSQPPSSRSLLSHEKGWVTLQLIRDPTNARGFLSARSVTGFLSDLYRTAADEVGKI 600

Query: 601 HLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQDDGPPSDNYGRFSGRE 660
            LIAD+RI GAVFDLPEEIAKELL K++PEGN++  +TKLPPLQDDGP SDNYGRFS R+
Sbjct: 601 FLIADDRIQGAVFDLPEEIAKELLEKDVPEGNSLSMITKLPPLQDDGPSSDNYGRFSSRD 660

Query: 661 RNSRNSSRDRRGFRTSRGWGSSRDSDA---DGDMFSRNRSFRTN--SSKGRNFRSSGDDW 720
           R  R      RG R  RG GSSR  D+   D D  SR  S   +  S  G + R S DDW
Sbjct: 661 RMPRGGG-GSRGSRGGRG-GSSRGRDSWGGDDDRGSRRSSGGGSSWSRGGSSSRGSSDDW 720

Query: 721 LIGGRRSSRSSSVDR---FGGSCFNCGRMGHRASECPDK 749
           LIGGR SS S +  R   FGGSCF CG+ GHRA++CPDK
Sbjct: 721 LIGGRSSSSSRAPSRERSFGGSCFICGKSGHRATDCPDK 745

[Close]

BLAST of Cmc02g0037241 vs. TAIR 10
Match: AT5G26742.3 (DEAD box RNA helicase (RH3) )

HSP 1 Score: 894.4 bits (2310), Expect = 6.1e-260
Identity = 473/618 (76.54%), Postives = 528/618 (85.44%), Query Frame = 0


Query: 140 RAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTED-DESRSLRRRSRLPRVLVLTPT 199
           RAVLVPAL+GRD+IARAKTGTGKTLAFGIPI+K+LTE+  +  + RR  RLP+ LVL PT
Sbjct: 37  RAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPT 96

Query: 200 RELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDVVVGTPGRLIDLINGNSLN 259
           RELAKQVEKEIKESAPYL+TVCVYGGVSY  QQ+AL+RGVDVVVGTPGR+IDLI G SL 
Sbjct: 97  RELAKQVEKEIKESAPYLSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLK 156

Query: 260 LGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSATMPTWVKKLARKYLDNPL 319
           LGEVEYLVLDEADQMLAVGFEE VE ILE LP++RQ+MLFSATMPTWVKKLARKYLDNPL
Sbjct: 157 LGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQSMLFSATMPTWVKKLARKYLDNPL 216

Query: 320 TIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKGGKTIVFTQTKRDADEVSL 379
            IDLVGDQDEKLAEGIKL+AI TT+TSK+TIL DL+TVYAKGGKTIVFTQTKRDADEVSL
Sbjct: 217 NIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSL 276

Query: 380 ALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPN 439
           AL+NSI +EALHGDISQHQRERTLN FRQGKFTVLVATDVASRGLDIPNVDLVIHYELPN
Sbjct: 277 ALSNSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPN 336

Query: 440 DPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGCKFEFANPPAIEQVLESSA 499
           DPETFVHRSGRTGRAGKEG+AILM T+SQ+RTVRSLERDVGC FEF +PP +  +LESSA
Sbjct: 337 DPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLERDVGCHFEFISPPTVGDLLESSA 396

Query: 500 EQVVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAAALAQLSGFSHPPSSRSLINHEQGW 559
           +QVV TL GVHP+SI++F+ TAQKL +E+G  ALAAALA LSGFS PPSSRSL++HE+GW
Sbjct: 397 DQVVATLNGVHPDSIKFFSATAQKLYEEKGTDALAAALAHLSGFSQPPSSRSLLSHEKGW 456

Query: 560 VTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEIGKIHLIADERINGAVFDLPEEIAK 619
           VTLQL RDP+ +RGFLSARSVTGFLSD+Y  AADE+GKI LIAD+RI GAVFDLPEEIAK
Sbjct: 457 VTLQLIRDPTNARGFLSARSVTGFLSDLYRTAADEVGKIFLIADDRIQGAVFDLPEEIAK 516

Query: 620 ELLNKELPEGNTILKVTKLPPLQDDGPPSDNYGRFSGRERNSRNSSRDRRGFRTSRGWGS 679
           ELL K++PEGN++  +TKLPPLQDDGP SDNYGRFS R+R  R      RG R  RG GS
Sbjct: 517 ELLEKDVPEGNSLSMITKLPPLQDDGPSSDNYGRFSSRDRMPRGGG-GSRGSRGGRG-GS 576

Query: 680 SRDSDA---DGDMFSRNRSFRTN--SSKGRNFRSSGDDWLIGGRRSSRSSSVDR---FGG 739
           SR  D+   D D  SR  S   +  S  G + R S DDWLIGGR SS S +  R   FGG
Sbjct: 577 SRGRDSWGGDDDRGSRRSSGGGSSWSRGGSSSRGSSDDWLIGGRSSSSSRAPSRERSFGG 636

Query: 740 SCFNCGRMGHRASECPDK 749
           SCF CG+ GHRA++CPDK
Sbjct: 637 SCFICGKSGHRATDCPDK 652

[Close]

BLAST of Cmc02g0037241 vs. TAIR 10
Match: AT3G22330.1 (putative mitochondrial RNA helicase 2 )

HSP 1 Score: 471.5 bits (1212), Expect = 1.3e-132
Identity = 239/396 (60.35%), Postives = 301/396 (76.01%), Query Frame = 0


Query: 106 SADDDELAISKLNLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLA 165
           S   D LAIS+L +   +  AL  +GI  LFPIQ+AVL PA+EGRD+I RA+TGTGKTLA
Sbjct: 98  SVGGDGLAISELGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLA 157

Query: 166 FGIPILKKLTEDDESRSLRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGV 225
           FGIPI+ K+ + +       R R P  LVL PTRELA+QVEKE +ESAP L+T+C+YGG 
Sbjct: 158 FGIPIIDKIIKYNAKHG---RGRNPLCLVLAPTRELARQVEKEFRESAPSLDTICLYGGT 217

Query: 226 SYVTQQNALSRGVDVVVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVI 285
               Q   L  GVDV VGTPGR+IDL+   +LNL EV+++VLDEADQML VGF EDVE+I
Sbjct: 218 PIGQQMRQLDYGVDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEII 277

Query: 286 LEKLPSQRQNMLFSATMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATS 345
           LEKLP +RQ+M+FSATMP+W++ L +KYL+NPLT+DLVGD D+KLA+GI  ++I+  +  
Sbjct: 278 LEKLPEKRQSMMFSATMPSWIRSLTKKYLNNPLTVDLVGDSDQKLADGITTYSIIADSYG 337

Query: 346 KQTILRDLVTVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGF 405
           + +I+  LVT +AKGGK IVFTQTKRDAD +S ALA S   EALHGDISQ QRERTL GF
Sbjct: 338 RASIIGPLVTEHAKGGKCIVFTQTKRDADRLSYALARSFKCEALHGDISQSQRERTLAGF 397

Query: 406 RQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTN 465
           R G F +LVATDVA+RGLD+PNVDL+IHYELPN+ ETFVHR+GRTGRAGK+G+AIL+++ 
Sbjct: 398 RDGHFNILVATDVAARGLDVPNVDLIIHYELPNNTETFVHRTGRTGRAGKKGSAILIYSQ 457

Query: 466 SQRRTVRSLERDVGCKFEFANPPAIEQVLESSAEQV 502
            Q R V+ +ER+VG +F      A+E+   S  E +
Sbjct: 458 DQSRAVKIIEREVGSRFTELPSIAVERGSASMFEGI 490

[Close]

BLAST of Cmc02g0037241 vs. TAIR 10
Match: AT3G22310.1 (putative mitochondrial RNA helicase 1 )

HSP 1 Score: 462.6 bits (1189), Expect = 6.0e-130
Identity = 242/431 (56.15%), Postives = 314/431 (72.85%), Query Frame = 0


Query: 71  NSILSEEAFRSLDGFSKDPLDDDLIDPEPNSSLAFSADDDELAISKLNLPQRLTDALQKR 130
           +SI+S   F + +       D  + D E   S+  S   D LAI+ L +   +  AL+ R
Sbjct: 78  SSIVSSAGFAAQEYAPSYENDGGIGDSE---SVGSSGGGDGLAIADLGISPEIVKALKGR 137

Query: 131 GITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDESRSLRRRSRLP 190
           GI  LFPIQ+AVL PA+EGRD+I RA+TGTGKTLAFGIPI+ K+ + +       R + P
Sbjct: 138 GIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIKFNAKHG---RGKNP 197

Query: 191 RVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDVVVGTPGRLID 250
           + LVL PTRELA+QVEKE +ESAP L+T+C+YGG     Q   L+ G+DV VGTPGR+ID
Sbjct: 198 QCLVLAPTRELARQVEKEFRESAPSLDTICLYGGTPIGQQMRELNYGIDVAVGTPGRIID 257

Query: 251 LINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSATMPTWVKKLA 310
           L+   +LNL EV+++VLDEADQML VGF EDVE+IL+KLP++RQ+M+FSATMP+W++ L 
Sbjct: 258 LMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKLPAKRQSMMFSATMPSWIRSLT 317

Query: 311 RKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKGGKTIVFTQTK 370
           +KYL+NPLTIDLVGD D+KLA+GI +++I   +  + +I+  LV  + KGGK IVFTQTK
Sbjct: 318 KKYLNNPLTIDLVGDSDQKLADGITMYSIAADSYGRASIIGPLVKEHGKGGKCIVFTQTK 377

Query: 371 RDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDL 430
           RDAD ++  LA S   EALHGDISQ QRERTL GFR G F++LVATDVA+RGLD+PNVDL
Sbjct: 378 RDADRLAFGLAKSYKCEALHGDISQAQRERTLAGFRDGNFSILVATDVAARGLDVPNVDL 437

Query: 431 VIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGCKFEFANPPAI 490
           VIHYELPN+ ETFVHR+GRTGRAGK+G+AIL+    Q R V+ +E++VG +F      A+
Sbjct: 438 VIHYELPNNTETFVHRTGRTGRAGKKGSAILIHGQDQTRAVKMIEKEVGSRFNELPSIAV 497

Query: 491 EQVLESSAEQV 502
           E+   S  E V
Sbjct: 498 ERGSASMFEGV 502

The following BLAST results are available for this feature:

BLAST of Cmc02g0037241 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008450498.1	0.0e+00	99.73	PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Cucumis melo]	[more]
XP_004135577.1	0.0e+00	96.93	DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Cucumis sativus] >KGN66001...	[more]
XP_038879136.1	0.0e+00	96.15	DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Benincasa hispida]	[more]
KAA0050973.1	0.0e+00	99.72	DEAD-box ATP-dependent RNA helicase 3 [Cucumis melo var. makuwa] >TYK10319.1 DEA...	[more]
XP_022157915.1	0.0e+00	90.33	DEAD-box ATP-dependent RNA helicase 3, chloroplastic isoform X1 [Momordica chara...	[more]

BLAST of Cmc02g0037241 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L7S8	5.6e-282	70.49	DEAD-box ATP-dependent RNA helicase 3, chloroplastic OS=Arabidopsis thaliana OX=...	[more]
Q0DM51	8.0e-273	67.37	DEAD-box ATP-dependent RNA helicase 3, chloroplastic OS=Oryza sativa subsp. japo...	[more]
A0A1D6GDY8	3.9e-267	69.27	DEAD-box ATP-dependent RNA helicase 3A, chloroplastic OS=Zea mays OX=4577 GN=RH3...	[more]
A0A1D6LAB7	8.6e-267	69.41	DEAD-box ATP-dependent RNA helicase 3B, chloroplastic OS=Zea mays OX=4577 GN=RH3...	[more]
Q9LUW5	1.8e-131	60.35	DEAD-box ATP-dependent RNA helicase 53, mitochondrial OS=Arabidopsis thaliana OX...	[more]

BLAST of Cmc02g0037241 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BQ06	0.0e+00	99.73	RNA helicase OS=Cucumis melo OX=3656 GN=LOC103492086 PE=3 SV=1	[more]
A0A0A0M1E9	0.0e+00	96.93	RNA helicase OS=Cucumis sativus OX=3659 GN=Csa_1G560830 PE=3 SV=1	[more]
A0A5D3CJA2	0.0e+00	99.72	RNA helicase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G004730 P...	[more]
A0A6J1DUC8	0.0e+00	90.33	RNA helicase OS=Momordica charantia OX=3673 GN=LOC111024523 PE=3 SV=1	[more]
A0A6J1EUB8	0.0e+00	91.41	RNA helicase OS=Cucurbita moschata OX=3662 GN=LOC111437838 PE=3 SV=1	[more]

BLAST of Cmc02g0037241 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G26742.1	2.3e-283	70.58	DEAD box RNA helicase (RH3)	[more]
AT5G26742.2	3.9e-283	70.49	DEAD box RNA helicase (RH3)	[more]
AT5G26742.3	6.1e-260	76.54	DEAD box RNA helicase (RH3)	[more]
AT3G22330.1	1.3e-132	60.35	putative mitochondrial RNA helicase 2	[more]
AT3G22310.1	6.0e-130	56.15	putative mitochondrial RNA helicase 1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 731..747 e-value: 2.4E-4 score: 30.4
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 731..746 e-value: 3.0E-6 score: 27.1
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 732..747 score: 10.674652
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 374..454 e-value: 6.5E-32 score: 122.0
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 348..454 e-value: 1.8E-31 score: 108.7
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 349..509 score: 23.345821
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 131..337 e-value: 6.1E-60 score: 215.1
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 143..320 score: 32.01828
IPR012562	GUCT	PFAM	PF08152	GUCT	coord: 541..641 e-value: 2.9E-17 score: 62.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 113..324 e-value: 5.7E-76 score: 256.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 334..526 e-value: 1.2E-51 score: 177.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 190..475
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 136..309 e-value: 7.5E-48 score: 162.6
None	No IPR available	GENE3D	4.10.60.10		coord: 717..748 e-value: 5.9E-6 score: 27.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 654..690
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 691..706
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 633..728
None	No IPR available	PANTHER	PTHR47959:SF12	SUBFAMILY NOT NAMED	coord: 26..743
None	No IPR available	PANTHER	PTHR47959	ATP-DEPENDENT RNA HELICASE RHLE-RELATED	coord: 26..743
None	No IPR available	CDD	cd12938	GUCT_Hera	coord: 548..628 e-value: 5.42879E-21 score: 85.4275
None	No IPR available	CDD	cd18787	SF2_C_DEAD	coord: 334..463 e-value: 9.70569E-54 score: 179.625
None	No IPR available	CDD	cd00268	DEADc	coord: 123..321 e-value: 3.0903E-91 score: 281.638
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 717..747

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc02g0037241.1	Cmc02g0037241.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000373	Group II intron splicing
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003724	RNA helicase activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003676	nucleic acid binding