Cmc01g0035041 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc01g0035041
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Integrase-type DNA-binding superfamily protein
Location	CMiso1.1chr01: 34406806 .. 34407783 (+)
RNA-Seq Expression	Cmc01g0035041
Synteny	Cmc01g0035041

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCCTACAAAAGCCTTCAACTCTCCTCTGTTTTCTCATATCCTCCATTGTTATACTTCAACAGTGCTTTCATATAAAACAAACTAAAACCCACTCTCTCTCTCTTCACAAAATCATGGCAAAACCAAAGAATTCAAATCCCCAAAACAAAACCACCCCTCTTCCCACTACTCGGCCGGCCGGCAAAAGACCAAGAGATTGCAACAAACACCCTGTTTTCCGAGGCGTACGGAAGCGGAGCTGGGGGAAATGGGTATCGGAAATCCGGCAACCCCGTAAGAATTCCCGAATTTGGCTCGGCACTTTTCCGACTCCGGAGATGGCGGCACGTGCTCACGATGCCGCCGCTTTATGCATCAAAGGCGACTCTGCCATCCTCAATTACCCTGAACTTGCAGACTTTTTGCCTAGGCCGGCGTCGCTCATGCCGCAGGATGTTCAGGCTGCCGCCGCCAAAGCCGCAGCGATGGTCCATTTGAATTCCGCTGCATTGCCGTCGGAGGAGGAGGAGCTGAGTGAGATCGTCGAGTTGCCGAATATTGAAGACGATTTTGGTACTGAGTCGTTGAACGAGTTCAAATTGGTTACTGAGTCATGGGAATGGTGGGAGTCCGTGGCAATGCCGTTGGCGGCGGAATTCGGTTACGGTTATTTTTCCGAGCAAACGACGGCGGAGGAAGGTTGTTACCCGAGCAGTTTTTACGGCGTACTATGGGATTAATTTTCTGGGGTAAAATTCGTGACATTTCAAGCGGTAAAAAAAAGTTATTAGTCAGTAATTATCGAAGAGTTATTTAAAATTTTACTTACAACTTTTGTAAAAATATTATACTTTGTTTGTTTTTTTGCTCTTTCTTTCTTTTATTTTGTTAGTGAAGAATAACTTAATTAAAATAGTTTGTAAGATGTAGAAAATGTATTGAAATTAAACACAATGATAATTTTGTTATTTGAATCTTCAATTTCCAGGTTGTGTTC

mRNA sequence

TTCCCTACAAAAGCCTTCAACTCTCCTCTGTTTTCTCATATCCTCCATTGTTATACTTCAACAGTGCTTTCATATAAAACAAACTAAAACCCACTCTCTCTCTCTTCACAAAATCATGGCAAAACCAAAGAATTCAAATCCCCAAAACAAAACCACCCCTCTTCCCACTACTCGGCCGGCCGGCAAAAGACCAAGAGATTGCAACAAACACCCTGTTTTCCGAGGCGTACGGAAGCGGAGCTGGGGGAAATGGGTATCGGAAATCCGGCAACCCCGTAAGAATTCCCGAATTTGGCTCGGCACTTTTCCGACTCCGGAGATGGCGGCACGTGCTCACGATGCCGCCGCTTTATGCATCAAAGGCGACTCTGCCATCCTCAATTACCCTGAACTTGCAGACTTTTTGCCTAGGCCGGCGTCGCTCATGCCGCAGGATGTTCAGGCTGCCGCCGCCAAAGCCGCAGCGATGGTCCATTTGAATTCCGCTGCATTGCCGTCGGAGGAGGAGGAGCTGAGTGAGATCGTCGAGTTGCCGAATATTGAAGACGATTTTGGTACTGAGTCGTTGAACGAGTTCAAATTGGTTACTGAGTCATGGGAATGGTGGGAGTCCGTGGCAATGCCGTTGGCGGCGGAATTCGGTTACGGTTATTTTTCCGAGCAAACGACGGCGGAGGAAGGTTGTTACCCGAGCAGTTTTTACGGCGTACTATGGGATTAATTTTCTGGGGTAAAATTCGTGACATTTCAAGCGGTAAAAAAAAGTTATTAGTCAGTAATTATCGAAGAGTTATTTAAAATTTTACTTACAACTTTTGTAAAAATATTATACTTTGTTTGTTTTTTTGCTCTTTCTTTCTTTTATTTTGTTAGTGAAGAATAACTTAATTAAAATAGTTTGTAAGATGTAGAAAATGTATTGAAATTAAACACAATGATAATTTTGTTATTTGAATCTTCAATTTCCAGGTTGTGTTC

Coding sequence (CDS)

ATGGCAAAACCAAAGAATTCAAATCCCCAAAACAAAACCACCCCTCTTCCCACTACTCGGCCGGCCGGCAAAAGACCAAGAGATTGCAACAAACACCCTGTTTTCCGAGGCGTACGGAAGCGGAGCTGGGGGAAATGGGTATCGGAAATCCGGCAACCCCGTAAGAATTCCCGAATTTGGCTCGGCACTTTTCCGACTCCGGAGATGGCGGCACGTGCTCACGATGCCGCCGCTTTATGCATCAAAGGCGACTCTGCCATCCTCAATTACCCTGAACTTGCAGACTTTTTGCCTAGGCCGGCGTCGCTCATGCCGCAGGATGTTCAGGCTGCCGCCGCCAAAGCCGCAGCGATGGTCCATTTGAATTCCGCTGCATTGCCGTCGGAGGAGGAGGAGCTGAGTGAGATCGTCGAGTTGCCGAATATTGAAGACGATTTTGGTACTGAGTCGTTGAACGAGTTCAAATTGGTTACTGAGTCATGGGAATGGTGGGAGTCCGTGGCAATGCCGTTGGCGGCGGAATTCGGTTACGGTTATTTTTCCGAGCAAACGACGGCGGAGGAAGGTTGTTACCCGAGCAGTTTTTACGGCGTACTATGGGATTAA

Protein sequence

MAKPKNSNPQNKTTPLPTTRPAGKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELADFLPRPASLMPQDVQAAAAKAAAMVHLNSAALPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWESVAMPLAAEFGYGYFSEQTTAEEGCYPSSFYGVLWD

Homology

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BLAST of Cmc01g0035041 vs. NCBI nr
Match: XP_008462184.1 (PREDICTED: dehydration-responsive element-binding protein 3-like [Cucumis melo] >KAA0059324.1 dehydration-responsive element-binding protein 3-like [Cucumis melo var. makuwa] >TYK04003.1 dehydration-responsive element-binding protein 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 411.4 bits (1056), Expect = 4.5e-111
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 1   MAKPKNSNPQNKTTPLPTTRPAGKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW 60
           MAKPKNSNPQNKTTPLPTTRPAGKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW
Sbjct: 1   MAKPKNSNPQNKTTPLPTTRPAGKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW 60

Query: 61  LGTFPTPEMAARAHDAAALCIKGDSAILNYPELADFLPRPASLMPQDVQAAAAKAAAMVH 120
           LGTFPTPEMAARAHDAAALCIKGDSAILNYPELADFLPRPASLMPQDVQAAAAKAAAMVH
Sbjct: 61  LGTFPTPEMAARAHDAAALCIKGDSAILNYPELADFLPRPASLMPQDVQAAAAKAAAMVH 120

Query: 121 LNSAALPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWESVAMPLAAEFGYGYF 180
           LNSAALPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWESVAMPLAAEFGYGYF
Sbjct: 121 LNSAALPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWESVAMPLAAEFGYGYF 180

Query: 181 SEQTTAEEGCYPSSFYGVLWD 202
           SEQTTAEEGCYPSSFYGVLWD
Sbjct: 181 SEQTTAEEGCYPSSFYGVLWD 201

[Close]

BLAST of Cmc01g0035041 vs. NCBI nr
Match: XP_004141836.1 (dehydration-responsive element-binding protein 3 [Cucumis sativus])

HSP 1 Score: 377.9 bits (969), Expect = 5.6e-101
Identity = 189/201 (94.03%), Postives = 189/201 (94.03%), Query Frame = 0


Query: 1   MAKPKNSNPQNKTTPLPTTRPAGKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW 60
           MAKPKNSNPQNKTT    T PA KRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW
Sbjct: 1   MAKPKNSNPQNKTTSSLPTTPASKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW 60

Query: 61  LGTFPTPEMAARAHDAAALCIKGDSAILNYPELADFLPRPASLMPQDVQAAAAKAAAMVH 120
           LGTFPTPEMAARAHDAAALCIKGDSAILNYPELAD LPRPASLMPQDVQAAAAKAAAMVH
Sbjct: 61  LGTFPTPEMAARAHDAAALCIKGDSAILNYPELADILPRPASLMPQDVQAAAAKAAAMVH 120

Query: 121 LNSAALPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWESVAMPLAAEFGYGYF 180
           LNSA LPSEEEELSEIVELPNIEDDF TESLNEFKLVTESWEWWESVAMPLAAEFG GYF
Sbjct: 121 LNSAGLPSEEEELSEIVELPNIEDDFCTESLNEFKLVTESWEWWESVAMPLAAEFGSGYF 180

Query: 181 SEQTTAEEGCYPSSFYGVLWD 202
           S QTTAEE CYPSSFYGVLWD
Sbjct: 181 SGQTTAEEICYPSSFYGVLWD 201

[Close]

BLAST of Cmc01g0035041 vs. NCBI nr
Match: XP_038899641.1 (dehydration-responsive element-binding protein 3-like [Benincasa hispida])

HSP 1 Score: 366.3 bits (939), Expect = 1.7e-97
Identity = 184/203 (90.64%), Postives = 190/203 (93.60%), Query Frame = 0


Query: 1   MAKPKNSNPQNKTTPLPTTRPAGKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW 60
           MAKPKNSNPQNK  PLP T P GKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW
Sbjct: 1   MAKPKNSNPQNKRNPLPLT-PTGKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW 60

Query: 61  LGTFPTPEMAARAHDAAALCIKGDSAILNYPELADFLPRPASLMPQDVQAAAAKAAAMVH 120
           LGTFPTPEMAARAHDAAALCIKGDSAILNYPELA+FLPRPASLMP DVQAAAAKAAAMV+
Sbjct: 61  LGTFPTPEMAARAHDAAALCIKGDSAILNYPELAEFLPRPASLMPHDVQAAAAKAAAMVN 120

Query: 121 LNSAAL--PSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWESVAMPLAAEFGYG 180
           LNSAAL  PSEEEELSEIVELPNIEDDFGTESL +F+LV+ESWEWWESVAMPLAAEF  G
Sbjct: 121 LNSAALPSPSEEEELSEIVELPNIEDDFGTESLKDFRLVSESWEWWESVAMPLAAEFDCG 180

Query: 181 YFSEQTTAEEGCYPSSFYGVLWD 202
           YFS+QTTAEE  YPSSFYGVLWD
Sbjct: 181 YFSDQTTAEESSYPSSFYGVLWD 202

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BLAST of Cmc01g0035041 vs. NCBI nr
Match: KAE8646475.1 (hypothetical protein Csa_016024 [Cucumis sativus])

HSP 1 Score: 333.6 bits (854), Expect = 1.2e-87
Identity = 168/178 (94.38%), Postives = 168/178 (94.38%), Query Frame = 0


Query: 1   MAKPKNSNPQNKTTPLPTTRPAGKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW 60
           MAKPKNSNPQNKTT    T PA KRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW
Sbjct: 1   MAKPKNSNPQNKTTSSLPTTPASKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW 60

Query: 61  LGTFPTPEMAARAHDAAALCIKGDSAILNYPELADFLPRPASLMPQDVQAAAAKAAAMVH 120
           LGTFPTPEMAARAHDAAALCIKGDSAILNYPELAD LPRPASLMPQDVQAAAAKAAAMVH
Sbjct: 61  LGTFPTPEMAARAHDAAALCIKGDSAILNYPELADILPRPASLMPQDVQAAAAKAAAMVH 120

Query: 121 LNSAALPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWESVAMPLAAEFGYG 179
           LNSA LPSEEEELSEIVELPNIEDDF TESLNEFKLVTESWEWWESVAMPLAAEFG G
Sbjct: 121 LNSAGLPSEEEELSEIVELPNIEDDFCTESLNEFKLVTESWEWWESVAMPLAAEFGSG 178

[Close]

BLAST of Cmc01g0035041 vs. NCBI nr
Match: XP_022964007.1 (ethylene-responsive transcription factor TINY-like [Cucurbita moschata])

HSP 1 Score: 310.5 bits (794), Expect = 1.1e-80
Identity = 165/219 (75.34%), Postives = 173/219 (79.00%), Query Frame = 0


Query: 1   MAKPKNSNPQNKTTP------LPTTRPAG------------KRPRDCNKHPVFRGVRKRS 60
           MAKPK+S P   TTP       P+TRP              KR RDCN+HPVFRGVRKRS
Sbjct: 1   MAKPKSSFP---TTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRS 60

Query: 61  WGKWVSEIRQPRKNSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELADFLPRPAS 120
           WGKWVSEIRQPRK SRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELA FLPRPAS
Sbjct: 61  WGKWVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPAS 120

Query: 121 LMPQDVQAAAAKAAAMVHLNSAALPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWE 180
           LMP D+QAAAAKAAAM    +   PSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWE
Sbjct: 121 LMPHDIQAAAAKAAAMA--TALPSPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWE 180

Query: 181 WWESVAMPLAAEFGYGYFSEQTTAEEGCYPSSFYGVLWD 202
           WWE VAMPLAAEFG   FS+Q  AE+  +P SFYG LWD
Sbjct: 181 WWEYVAMPLAAEFGSCSFSDQLAAEDSLFPCSFYGALWD 214

[Close]

BLAST of Cmc01g0035041 vs. ExPASy Swiss-Prot
Match: Q9LYD3 (Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DREB3 PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.4e-38
Identity = 99/202 (49.01%), Postives = 122/202 (60.40%), Query Frame = 0


Query: 24  KRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIWLGTFPTPEMAARAHDAAALCIKG 83
           KR RD  KHPV+RGVR R+WGKWVSEIR+PRK SRIWLGTFPTPEMAARAHD AAL IKG
Sbjct: 40  KRGRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKG 99

Query: 84  DSAILNYPELADFLPRPASLMPQDVQAAAAKAAAMVHL--------NSAALPS------- 143
            +AILN+PELAD  PRP SL P+D+Q AA KAA M           +S++L S       
Sbjct: 100 TAAILNFPELADSFPRPVSLSPRDIQTAALKAAHMEPTTSFSSSTSSSSSLSSTSSLESL 159

Query: 144 ---------EEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWESVAMPLAAEFGYGY 202
                    E EEL EIVELP++   +  +S N    +   + +++SV   L     +G 
Sbjct: 160 VLVMDLSRTESEELGEIVELPSLGASYDVDSAN----LGNEFVFYDSVDYCLYPP-PWGQ 219

[Close]

BLAST of Cmc01g0035041 vs. ExPASy Swiss-Prot
Match: Q39127 (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN=TINY PE=2 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 6.5e-36
Identity = 88/166 (53.01%), Postives = 108/166 (65.06%), Query Frame = 0


Query: 24  KRP-RDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIWLGTFPTPEMAARAHDAAALCIK 83
           K+P +D  KHPV+RGVRKR+WGKWVSEIR+PRK SRIWLGTFP+PEMAARAHD AAL IK
Sbjct: 24  KKPVKDSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIK 83

Query: 84  GDSAILNYPELADFLPRPASLMPQDVQAAAAKAAAMVHLNSAALPSE------------- 143
           G SAILN+P+LA   PRP+SL P+D+Q AA KAA M    S +  S              
Sbjct: 84  GASAILNFPDLAGSFPRPSSLSPRDIQVAALKAAHMETSQSFSSSSSLTFSSSQSSSSLE 143

Query: 144 ---------EEELSEIVELPNIEDDFG--TESLNEFKLVTESWEWW 165
                     EEL EIVELP++   +   T+  NEF + ++S + W
Sbjct: 144 SLVSSSATGSEELGEIVELPSLGSSYDGLTQLGNEF-IFSDSADLW 188

[Close]

BLAST of Cmc01g0035041 vs. ExPASy Swiss-Prot
Match: O80654 (Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana OX=3702 GN=ERF037 PE=1 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.5e-35
Identity = 90/166 (54.22%), Postives = 105/166 (63.25%), Query Frame = 0


Query: 33  PVFRGVRKRSWGKWVSEIRQPRKNSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPE 92
           P +RGVR R+WGKWVSEIR+PRK SRIWLGTF TPEMAARAHDAAAL IKG SA+LN+PE
Sbjct: 41  PGYRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDAAALTIKGTSAVLNFPE 100

Query: 93  LADFLPRPASLMPQDVQAAAAKAAAM-------------------------------VHL 152
           LA +LPRPAS  P+DVQAAAA AAAM                                  
Sbjct: 101 LATYLPRPASSSPRDVQAAAAVAAAMDFSPSSSSLVVSDPTTVIAPAETQLSSSSYSTCT 160

Query: 153 NSAALPSEE------EELSEIVELPNIEDDFGTESLNEFKLVTESW 162
           +S+  PS E      EELSEIVELP++E  +  ESL+EF  V  ++
Sbjct: 161 SSSLSPSSEEAASTAEELSEIVELPSLETSY-DESLSEFVYVDSAY 205

[Close]

BLAST of Cmc01g0035041 vs. ExPASy Swiss-Prot
Match: Q9LU18 (Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana OX=3702 GN=ERF036 PE=2 SV=2)

HSP 1 Score: 147.1 bits (370), Expect = 2.1e-34
Identity = 86/169 (50.89%), Postives = 104/169 (61.54%), Query Frame = 0


Query: 2   AKPKNSNPQNKTTPLPTTRPAGKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIWL 61
           A P+N+N + +     +   +        +HPV+RGVR RSWGKWVSEIRQPRK +RIWL
Sbjct: 33  APPRNNNTRKRRRDSSSASSSSSM-----QHPVYRGVRMRSWGKWVSEIRQPRKKTRIWL 92

Query: 62  GTFPTPEMAARAHDAAALCIKGDSAILNYPELADFLPRPASLMPQDVQAAAAKAAAMVHL 121
           GTF T +MAARAHD AAL IKG SA+LN+PELA   PRPAS  P D+Q AAA+AAAMV  
Sbjct: 93  GTFVTADMAARAHDVAALTIKGSSAVLNFPELASLFPRPASSSPHDIQTAAAEAAAMVVE 152

Query: 122 NS-------------------AALPSEEEELSEIVELPNIEDDFGTESL 152
                                AA   +EE L +IVELPNIE+    ES+
Sbjct: 153 EKLLEKDEAPEAPPSSESSYVAAESEDEERLEKIVELPNIEEGSYDESV 196

[Close]

BLAST of Cmc01g0035041 vs. ExPASy Swiss-Prot
Match: Q9M080 (Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana OX=3702 GN=ERF043 PE=2 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 5.2e-33
Identity = 72/108 (66.67%), Postives = 84/108 (77.78%), Query Frame = 0


Query: 24  KRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIWLGTFPTPEMAARAHDAAALCIKG 83
           K  ++ NK PV+RGVR RSWGKWVSEIR+PRK SRIWLGTFPT EMA RAHD AA+ IKG
Sbjct: 8   KEKKENNKQPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAAMSIKG 67

Query: 84  DSAILNYPELADFLPRPASLMPQDVQAAAAKAAAMVHLNSAALPSEEE 132
            SAILN+PEL+  LPRP SL P+DV+AAA KAA M   ++ A  S+ E
Sbjct: 68  TSAILNFPELSKLLPRPVSLSPRDVRAAATKAALM-DFDTTAFRSDTE 114

[Close]

BLAST of Cmc01g0035041 vs. ExPASy TrEMBL
Match: A0A5D3BW76 (Dehydration-responsive element-binding protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G002010 PE=4 SV=1)

HSP 1 Score: 411.4 bits (1056), Expect = 2.2e-111
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 1   MAKPKNSNPQNKTTPLPTTRPAGKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW 60
           MAKPKNSNPQNKTTPLPTTRPAGKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW
Sbjct: 1   MAKPKNSNPQNKTTPLPTTRPAGKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW 60

Query: 61  LGTFPTPEMAARAHDAAALCIKGDSAILNYPELADFLPRPASLMPQDVQAAAAKAAAMVH 120
           LGTFPTPEMAARAHDAAALCIKGDSAILNYPELADFLPRPASLMPQDVQAAAAKAAAMVH
Sbjct: 61  LGTFPTPEMAARAHDAAALCIKGDSAILNYPELADFLPRPASLMPQDVQAAAAKAAAMVH 120

Query: 121 LNSAALPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWESVAMPLAAEFGYGYF 180
           LNSAALPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWESVAMPLAAEFGYGYF
Sbjct: 121 LNSAALPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWESVAMPLAAEFGYGYF 180

Query: 181 SEQTTAEEGCYPSSFYGVLWD 202
           SEQTTAEEGCYPSSFYGVLWD
Sbjct: 181 SEQTTAEEGCYPSSFYGVLWD 201

[Close]

BLAST of Cmc01g0035041 vs. ExPASy TrEMBL
Match: A0A1S3CGW5 (dehydration-responsive element-binding protein 3-like OS=Cucumis melo OX=3656 GN=LOC103500606 PE=4 SV=1)

HSP 1 Score: 411.4 bits (1056), Expect = 2.2e-111
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 1   MAKPKNSNPQNKTTPLPTTRPAGKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW 60
           MAKPKNSNPQNKTTPLPTTRPAGKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW
Sbjct: 1   MAKPKNSNPQNKTTPLPTTRPAGKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW 60

Query: 61  LGTFPTPEMAARAHDAAALCIKGDSAILNYPELADFLPRPASLMPQDVQAAAAKAAAMVH 120
           LGTFPTPEMAARAHDAAALCIKGDSAILNYPELADFLPRPASLMPQDVQAAAAKAAAMVH
Sbjct: 61  LGTFPTPEMAARAHDAAALCIKGDSAILNYPELADFLPRPASLMPQDVQAAAAKAAAMVH 120

Query: 121 LNSAALPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWESVAMPLAAEFGYGYF 180
           LNSAALPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWESVAMPLAAEFGYGYF
Sbjct: 121 LNSAALPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWESVAMPLAAEFGYGYF 180

Query: 181 SEQTTAEEGCYPSSFYGVLWD 202
           SEQTTAEEGCYPSSFYGVLWD
Sbjct: 181 SEQTTAEEGCYPSSFYGVLWD 201

[Close]

BLAST of Cmc01g0035041 vs. ExPASy TrEMBL
Match: A0A0A0K6P8 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G447150 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 2.7e-101
Identity = 189/201 (94.03%), Postives = 189/201 (94.03%), Query Frame = 0


Query: 1   MAKPKNSNPQNKTTPLPTTRPAGKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW 60
           MAKPKNSNPQNKTT    T PA KRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW
Sbjct: 1   MAKPKNSNPQNKTTSSLPTTPASKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW 60

Query: 61  LGTFPTPEMAARAHDAAALCIKGDSAILNYPELADFLPRPASLMPQDVQAAAAKAAAMVH 120
           LGTFPTPEMAARAHDAAALCIKGDSAILNYPELAD LPRPASLMPQDVQAAAAKAAAMVH
Sbjct: 61  LGTFPTPEMAARAHDAAALCIKGDSAILNYPELADILPRPASLMPQDVQAAAAKAAAMVH 120

Query: 121 LNSAALPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWESVAMPLAAEFGYGYF 180
           LNSA LPSEEEELSEIVELPNIEDDF TESLNEFKLVTESWEWWESVAMPLAAEFG GYF
Sbjct: 121 LNSAGLPSEEEELSEIVELPNIEDDFCTESLNEFKLVTESWEWWESVAMPLAAEFGSGYF 180

Query: 181 SEQTTAEEGCYPSSFYGVLWD 202
           S QTTAEE CYPSSFYGVLWD
Sbjct: 181 SGQTTAEEICYPSSFYGVLWD 201

[Close]

BLAST of Cmc01g0035041 vs. ExPASy TrEMBL
Match: A0A6J1HGN7 (ethylene-responsive transcription factor TINY-like OS=Cucurbita moschata OX=3662 GN=LOC111464158 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 5.3e-81
Identity = 165/219 (75.34%), Postives = 173/219 (79.00%), Query Frame = 0


Query: 1   MAKPKNSNPQNKTTP------LPTTRPAG------------KRPRDCNKHPVFRGVRKRS 60
           MAKPK+S P   TTP       P+TRP              KR RDCN+HPVFRGVRKRS
Sbjct: 1   MAKPKSSFP---TTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRS 60

Query: 61  WGKWVSEIRQPRKNSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELADFLPRPAS 120
           WGKWVSEIRQPRK SRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELA FLPRPAS
Sbjct: 61  WGKWVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPAS 120

Query: 121 LMPQDVQAAAAKAAAMVHLNSAALPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWE 180
           LMP D+QAAAAKAAAM    +   PSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWE
Sbjct: 121 LMPHDIQAAAAKAAAMA--TALPSPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWE 180

Query: 181 WWESVAMPLAAEFGYGYFSEQTTAEEGCYPSSFYGVLWD 202
           WWE VAMPLAAEFG   FS+Q  AE+  +P SFYG LWD
Sbjct: 181 WWEYVAMPLAAEFGSCSFSDQLAAEDSLFPCSFYGALWD 214

[Close]

BLAST of Cmc01g0035041 vs. ExPASy TrEMBL
Match: A0A6J1D072 (dehydration-responsive element-binding protein 3 OS=Momordica charantia OX=3673 GN=LOC111015808 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 2.2e-79
Identity = 159/210 (75.71%), Postives = 171/210 (81.43%), Query Frame = 0


Query: 1   MAKPKNSNPQ-----NKTTPLPTTRPAGKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRK 60
           MAKPKNS+PQ     +    +   RPA KR RDCN+HP+FRGVRKRSWGKWVSEIRQPRK
Sbjct: 1   MAKPKNSDPQTIPAVSGAGAVQPDRPAAKRARDCNRHPLFRGVRKRSWGKWVSEIRQPRK 60

Query: 61  NSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELADFLPRPASLMPQDVQAAAAKA 120
            SRIWLGTFPTPEMAARAHDAAAL IKGDSAILNYPELA FLPRPASL P D+QAAAAKA
Sbjct: 61  KSRIWLGTFPTPEMAARAHDAAALSIKGDSAILNYPELAQFLPRPASLTPHDIQAAAAKA 120

Query: 121 AAMVHLNSAA--LPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWESVAMP--L 180
           AAMV+  S +   PSEEEELSEIVELPNIEDDF TES +EF LVTESWEWWE VAMP  L
Sbjct: 121 AAMVNFKSTSSPSPSEEEELSEIVELPNIEDDFATESQSEFALVTESWEWWECVAMPLEL 180

Query: 181 AAEFGYGYFSEQTTAEEGCYPSSFYGVLWD 202
           AAEFG  ++S QTTAEE  +P  FYG LWD
Sbjct: 181 AAEFGGDFYSNQTTAEENLFPGCFYGALWD 210

[Close]

BLAST of Cmc01g0035041 vs. TAIR 10
Match: AT5G11590.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 161.0 bits (406), Expect = 1.0e-39
Identity = 99/202 (49.01%), Postives = 122/202 (60.40%), Query Frame = 0


Query: 24  KRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIWLGTFPTPEMAARAHDAAALCIKG 83
           KR RD  KHPV+RGVR R+WGKWVSEIR+PRK SRIWLGTFPTPEMAARAHD AAL IKG
Sbjct: 40  KRGRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKG 99

Query: 84  DSAILNYPELADFLPRPASLMPQDVQAAAAKAAAMVHL--------NSAALPS------- 143
            +AILN+PELAD  PRP SL P+D+Q AA KAA M           +S++L S       
Sbjct: 100 TAAILNFPELADSFPRPVSLSPRDIQTAALKAAHMEPTTSFSSSTSSSSSLSSTSSLESL 159

Query: 144 ---------EEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWESVAMPLAAEFGYGY 202
                    E EEL EIVELP++   +  +S N    +   + +++SV   L     +G 
Sbjct: 160 VLVMDLSRTESEELGEIVELPSLGASYDVDSAN----LGNEFVFYDSVDYCLYPP-PWGQ 219

[Close]

BLAST of Cmc01g0035041 vs. TAIR 10
Match: AT5G25810.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 152.1 bits (383), Expect = 4.6e-37
Identity = 88/166 (53.01%), Postives = 108/166 (65.06%), Query Frame = 0


Query: 24  KRP-RDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIWLGTFPTPEMAARAHDAAALCIK 83
           K+P +D  KHPV+RGVRKR+WGKWVSEIR+PRK SRIWLGTFP+PEMAARAHD AAL IK
Sbjct: 24  KKPVKDSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIK 83

Query: 84  GDSAILNYPELADFLPRPASLMPQDVQAAAAKAAAMVHLNSAALPSE------------- 143
           G SAILN+P+LA   PRP+SL P+D+Q AA KAA M    S +  S              
Sbjct: 84  GASAILNFPDLAGSFPRPSSLSPRDIQVAALKAAHMETSQSFSSSSSLTFSSSQSSSSLE 143

Query: 144 ---------EEELSEIVELPNIEDDFG--TESLNEFKLVTESWEWW 165
                     EEL EIVELP++   +   T+  NEF + ++S + W
Sbjct: 144 SLVSSSATGSEELGEIVELPSLGSSYDGLTQLGNEF-IFSDSADLW 188

[Close]

BLAST of Cmc01g0035041 vs. TAIR 10
Match: AT1G77200.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 150.2 bits (378), Expect = 1.8e-36
Identity = 90/166 (54.22%), Postives = 105/166 (63.25%), Query Frame = 0


Query: 33  PVFRGVRKRSWGKWVSEIRQPRKNSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPE 92
           P +RGVR R+WGKWVSEIR+PRK SRIWLGTF TPEMAARAHDAAAL IKG SA+LN+PE
Sbjct: 41  PGYRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDAAALTIKGTSAVLNFPE 100

Query: 93  LADFLPRPASLMPQDVQAAAAKAAAM-------------------------------VHL 152
           LA +LPRPAS  P+DVQAAAA AAAM                                  
Sbjct: 101 LATYLPRPASSSPRDVQAAAAVAAAMDFSPSSSSLVVSDPTTVIAPAETQLSSSSYSTCT 160

Query: 153 NSAALPSEE------EELSEIVELPNIEDDFGTESLNEFKLVTESW 162
           +S+  PS E      EELSEIVELP++E  +  ESL+EF  V  ++
Sbjct: 161 SSSLSPSSEEAASTAEELSEIVELPSLETSY-DESLSEFVYVDSAY 205

[Close]

BLAST of Cmc01g0035041 vs. TAIR 10
Match: AT3G16280.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 147.1 bits (370), Expect = 1.5e-35
Identity = 86/169 (50.89%), Postives = 104/169 (61.54%), Query Frame = 0


Query: 2   AKPKNSNPQNKTTPLPTTRPAGKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIWL 61
           A P+N+N + +     +   +        +HPV+RGVR RSWGKWVSEIRQPRK +RIWL
Sbjct: 33  APPRNNNTRKRRRDSSSASSSSSM-----QHPVYRGVRMRSWGKWVSEIRQPRKKTRIWL 92

Query: 62  GTFPTPEMAARAHDAAALCIKGDSAILNYPELADFLPRPASLMPQDVQAAAAKAAAMVHL 121
           GTF T +MAARAHD AAL IKG SA+LN+PELA   PRPAS  P D+Q AAA+AAAMV  
Sbjct: 93  GTFVTADMAARAHDVAALTIKGSSAVLNFPELASLFPRPASSSPHDIQTAAAEAAAMVVE 152

Query: 122 NS-------------------AALPSEEEELSEIVELPNIEDDFGTESL 152
                                AA   +EE L +IVELPNIE+    ES+
Sbjct: 153 EKLLEKDEAPEAPPSSESSYVAAESEDEERLEKIVELPNIEEGSYDESV 196

[Close]

BLAST of Cmc01g0035041 vs. TAIR 10
Match: AT4G32800.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 142.5 bits (358), Expect = 3.7e-34
Identity = 72/108 (66.67%), Postives = 84/108 (77.78%), Query Frame = 0


Query: 24  KRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIWLGTFPTPEMAARAHDAAALCIKG 83
           K  ++ NK PV+RGVR RSWGKWVSEIR+PRK SRIWLGTFPT EMA RAHD AA+ IKG
Sbjct: 8   KEKKENNKQPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAAMSIKG 67

Query: 84  DSAILNYPELADFLPRPASLMPQDVQAAAAKAAAMVHLNSAALPSEEE 132
            SAILN+PEL+  LPRP SL P+DV+AAA KAA M   ++ A  S+ E
Sbjct: 68  TSAILNFPELSKLLPRPVSLSPRDVRAAATKAALM-DFDTTAFRSDTE 114

The following BLAST results are available for this feature:

BLAST of Cmc01g0035041 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008462184.1	4.5e-111	100.00	PREDICTED: dehydration-responsive element-binding protein 3-like [Cucumis melo] ...	[more]
XP_004141836.1	5.6e-101	94.03	dehydration-responsive element-binding protein 3 [Cucumis sativus]	[more]
XP_038899641.1	1.7e-97	90.64	dehydration-responsive element-binding protein 3-like [Benincasa hispida]	[more]
KAE8646475.1	1.2e-87	94.38	hypothetical protein Csa_016024 [Cucumis sativus]	[more]
XP_022964007.1	1.1e-80	75.34	ethylene-responsive transcription factor TINY-like [Cucurbita moschata]	[more]

BLAST of Cmc01g0035041 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LYD3	1.4e-38	49.01	Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702...	[more]
Q39127	6.5e-36	53.01	Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN...	[more]
O80654	2.5e-35	54.22	Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LU18	2.1e-34	50.89	Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9M080	5.2e-33	66.67	Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Cmc01g0035041 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BW76	2.2e-111	100.00	Dehydration-responsive element-binding protein 3-like OS=Cucumis melo var. makuw...	[more]
A0A1S3CGW5	2.2e-111	100.00	dehydration-responsive element-binding protein 3-like OS=Cucumis melo OX=3656 GN...	[more]
A0A0A0K6P8	2.7e-101	94.03	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G447150 PE=...	[more]
A0A6J1HGN7	5.3e-81	75.34	ethylene-responsive transcription factor TINY-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1D072	2.2e-79	75.71	dehydration-responsive element-binding protein 3 OS=Momordica charantia OX=3673 ...	[more]

BLAST of Cmc01g0035041 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11590.1	1.0e-39	49.01	Integrase-type DNA-binding superfamily protein	[more]
AT5G25810.1	4.6e-37	53.01	Integrase-type DNA-binding superfamily protein	[more]
AT1G77200.1	1.8e-36	54.22	Integrase-type DNA-binding superfamily protein	[more]
AT3G16280.1	1.5e-35	50.89	Integrase-type DNA-binding superfamily protein	[more]
AT4G32800.1	3.7e-34	66.67	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 57..73 score: 66.52 coord: 35..46 score: 65.61
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 34..97 e-value: 3.9E-33 score: 126.1
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 33..83 e-value: 6.4E-15 score: 55.1
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 34..91 score: 22.721256
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 35..93 e-value: 3.46763E-20 score: 78.0823
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 34..92 e-value: 7.5E-24 score: 85.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	PANTHER	PTHR31985:SF95	AP2 DOMAIN CLASS TRANSCRIPTION FACTOR	coord: 4..164
None	No IPR available	PANTHER	PTHR31985	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED	coord: 4..164
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 34..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc01g0035041.1	Cmc01g0035041.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity