Cmc01g0030321 (gene) Melon (Charmono) v1.1

Overview
NameCmc01g0030321
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr01: 31347273 .. 31348292 (+)
RNA-Seq ExpressionCmc01g0030321
SyntenyCmc01g0030321
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGTGCTTTAGAATTAGGCATAATACAACATATAGCCTTAAGTTGTTAAGGTTGAGCATTGAAAGCTCCATGAGAAACAACGCTACCGGTAATGGTGCTTGTAGTTTGGTGATGAGTATGAAAAACAACGCTGCTGCTGCCACTTGTGTGAATACCATGAGCTCCCTTTGTATTTTGGACATTGTGAGAAGCAAACATGCTTTTGCTGCTGCTGCTCTTACTAGTATGGATTCCTTGAGAAAACAAACCAGCACCACCACGAATCATGCCAGCTCCATGTCCATGAGAAACAACAGTACTGGTGGCGCTCTTCACTCTAGTTTCTTGACCGCTGGCCACGACGACACTCCTTCTCCCCATGTTCCCACCGATTTTTCCTCTATGAGAAATGACAACACTGCCGCCACTCTTTGCACTCACTTCGTGACCGCTAGATACTGCAACAATACTACCGCCTCCATTCACACCGGTTTTGGAACCACGGGCGACAACGATGCTGCTGCTACCCTTCTTCGTGATTTCTTGACCTTGAGAAACCGCAACCAAACTACTACCGTTCTTCACACCGGTTTTGCCACCATGAGAAACAATAACACTACTACCACCACTCTTCTTGCTGATTTCATGACCACTAGAAATAGCAACGACACTTCCGCCGTTGCCGTTCGCACCCGTTTTTTTACCATGAGAAACGACAACACTACCGGCACCCTTTGCCGTGCTGGTTTCATGACCATGAGAGACAACAAGAATTTTTCCGCCGACGCTGCTCACTGGTGCAACCGCTGGTGCTTGTTTGCCGTGTGATCCAAAGGCACGGAAGGGGAATTTATTATCGACAGCGGGTTCTACGCTACCAGTGAAGTCACCGAAAGTGGCTCCGACCTTCCCACAACATTGCCAAACAAGCACTAAGAAAAGGGTGTGAAAGAGCTTGAAACCTTTTGGTGCCATTACCTTGGTAAAAATGGTGTGAGTTGAAATTGTAGGGATTTCAAGCTCTTTTCATAAAATGTGAAGG

mRNA sequence

GGTGCTTTAGAATTAGGCATAATACAACATATAGCCTTAAGTTGTTAAGGTTGAGCATTGAAAGCTCCATGAGAAACAACGCTACCGGTAATGGTGCTTGTAGTTTGGTGATGAGTATGAAAAACAACGCTGCTGCTGCCACTTGTGTGAATACCATGAGCTCCCTTTGTATTTTGGACATTGTGAGAAGCAAACATGCTTTTGCTGCTGCTGCTCTTACTAGTATGGATTCCTTGAGAAAACAAACCAGCACCACCACGAATCATGCCAGCTCCATGTCCATGAGAAACAACAGTACTGGTGGCGCTCTTCACTCTAGTTTCTTGACCGCTGGCCACGACGACACTCCTTCTCCCCATGTTCCCACCGATTTTTCCTCTATGAGAAATGACAACACTGCCGCCACTCTTTGCACTCACTTCGTGACCGCTAGATACTGCAACAATACTACCGCCTCCATTCACACCGGTTTTGGAACCACGGGCGACAACGATGCTGCTGCTACCCTTCTTCGTGATTTCTTGACCTTGAGAAACCGCAACCAAACTACTACCGTTCTTCACACCGGTTTTGCCACCATGAGAAACAATAACACTACTACCACCACTCTTCTTGCTGATTTCATGACCACTAGAAATAGCAACGACACTTCCGCCGTTGCCGTTCGCACCCGTTTTTTTACCATGAGAAACGACAACACTACCGGCACCCTTTGCCGTGCTGGTTTCATGACCATGAGAGACAACAAGAATTTTTCCGCCGACGCTGCTCACTGGTGCAACCGCTGGTGCTTGTTTGCCGTGTGATCCAAAGGCACGGAAGGGGAATTTATTATCGACAGCGGGTTCTACGCTACCAGTGAAGTCACCGAAAGTGGCTCCGACCTTCCCACAACATTGCCAAACAAGCACTAAGAAAAGGGTGTGAAAGAGCTTGAAACCTTTTGGTGCCATTACCTTGGTAAAAATGGTGTGAGTTGAAATTGTAGGGATTTCAAGCTCTTTTCATAAAATGTGAAGG

Coding sequence (CDS)

ATGAGAAACAACGCTACCGGTAATGGTGCTTGTAGTTTGGTGATGAGTATGAAAAACAACGCTGCTGCTGCCACTTGTGTGAATACCATGAGCTCCCTTTGTATTTTGGACATTGTGAGAAGCAAACATGCTTTTGCTGCTGCTGCTCTTACTAGTATGGATTCCTTGAGAAAACAAACCAGCACCACCACGAATCATGCCAGCTCCATGTCCATGAGAAACAACAGTACTGGTGGCGCTCTTCACTCTAGTTTCTTGACCGCTGGCCACGACGACACTCCTTCTCCCCATGTTCCCACCGATTTTTCCTCTATGAGAAATGACAACACTGCCGCCACTCTTTGCACTCACTTCGTGACCGCTAGATACTGCAACAATACTACCGCCTCCATTCACACCGGTTTTGGAACCACGGGCGACAACGATGCTGCTGCTACCCTTCTTCGTGATTTCTTGACCTTGAGAAACCGCAACCAAACTACTACCGTTCTTCACACCGGTTTTGCCACCATGAGAAACAATAACACTACTACCACCACTCTTCTTGCTGATTTCATGACCACTAGAAATAGCAACGACACTTCCGCCGTTGCCGTTCGCACCCGTTTTTTTACCATGAGAAACGACAACACTACCGGCACCCTTTGCCGTGCTGGTTTCATGACCATGAGAGACAACAAGAATTTTTCCGCCGACGCTGCTCACTGGTGCAACCGCTGGTGCTTGTTTGCCGTGTGA

Protein sequence

MRNNATGNGACSLVMSMKNNAAAATCVNTMSSLCILDIVRSKHAFAAAALTSMDSLRKQTSTTTNHASSMSMRNNSTGGALHSSFLTAGHDDTPSPHVPTDFSSMRNDNTAATLCTHFVTARYCNNTTASIHTGFGTTGDNDAAATLLRDFLTLRNRNQTTTVLHTGFATMRNNNTTTTTLLADFMTTRNSNDTSAVAVRTRFFTMRNDNTTGTLCRAGFMTMRDNKNFSADAAHWCNRWCLFAV
Homology
[Close]
BLAST of Cmc01g0030321 vs. ExPASy TrEMBL
Match: A0A0A0K7V9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G398745 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.6e-68
Identity = 143/171 (83.63%), Postives = 154/171 (90.06%), Query Frame = 0 

Query: 70  MSMRNNSTGGALHSSFLTAGHDDTPSPHVPTDFSSMRNDNTAATLCTHFVTARYCNNTTA 129
           MSMRNNSTGGALHSSFLTAGHDDTP+P V TDF+ MRNDNTAATLCT+FVT RY N+TTA
Sbjct: 1   MSMRNNSTGGALHSSFLTAGHDDTPAPPVGTDFAFMRNDNTAATLCTYFVTGRYSNSTTA 60

Query: 130 SIHTGFGTTGDNDAAATLLRDFLTLRNRNQTTT-VLHTGFATMRNNNTTTTTLLADFMTT 189
           SIHTG GTTG+NDAAATLLRDFLTLRN NQTTT V+HTGFATMRNNNTT+TTLLA+FMTT
Sbjct: 61  SIHTGLGTTGNNDAAATLLRDFLTLRNCNQTTTAVVHTGFATMRNNNTTSTTLLANFMTT 120

Query: 190 RNSNDTSAVAVRTRFFTMRNDNTTGTLCRAGFMTMRDNKNFSADAAHWCNR 240
           RN NDTSAV VRT F TMRNDNTTGT CRA FMT+R+NKNFS D AH C+R
Sbjct: 121 RNRNDTSAVGVRTSFSTMRNDNTTGTFCRANFMTLRNNKNFSTDTAHRCDR 171

The following BLAST results are available for this feature:
BLAST of Cmc01g0030321 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc01g0030321 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc01g0030321 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K7V91.6e-6883.63Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G398745 PE=4 SV=1[more]
BLAST of Cmc01g0030321 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc01g0030321.1Cmc01g0030321.1mRNA