Cmc01g0030291 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc01g0030291
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Exopolygalacturonase-like
Location	CMiso1.1chr01: 31316045 .. 31316823 (-)
RNA-Seq Expression	Cmc01g0030291
Synteny	Cmc01g0030291

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAACATGGATTGCAGCTTGCCGGAATACAGTCGGTCCGGCGAAGTTCTTGATCCCACAAGGCACATATCTGGTGGGTCCGGTGACTTTTGCCGGTCCGTGCAAAAGCTTTCCGATCACCCTCGAAAATCAAGGAACTGTGAAGGCCACAACCGATATTAGTGAATATTCATCTCCTGAATGGTTCTCCATTGAAGATATTACTGGCTTCATCCTCACCGGCTCCGGCGTCTTTGACGGTCAAGGCGTCACCGTTTGGCCCTATAATGACTGCAAGAAAAACAGATTTTGCCAACTTCTTCCAATCGTAATTAACCATATAGAATTTTGCCTAACTCAATCATTTATTTTCCTTTCATTTTAAATTACAAACTGTTTTACACTCGAAACTTTTTGATTTGTCTCTATTAATACGTTATGCTATATTTGAAAAAATTCTTTTAACGATTTTGATTTATTCATTGATTTTTTCTTTTTTTGTAGTCGATTAAATTCTCGAGATTAAATCACACGATCGTTGATGGGCTCACTTCAGTAAACAGCATGGGGTTCCACACTTCCGTATTCTACTGTTACAATTTCACTGCTACTAACATGAAAATTATAGCTCCACATAATAGTCCGAACACCGATGGAATGCACCTTAGCACCTCAAAATTGGTCACCATTACCAACAGTGTCATTGGCACCGGTGATGATTGTGTCTCCATCGGCCACAGTACTGAGAATATCGTTGTCACCAATGTCACTTGCGGCCCAGGACATGGCCTCAGGTAA

mRNA sequence

ATGACAACATGGATTGCAGCTTGCCGGAATACAGTCGGTCCGGCGAAGTTCTTGATCCCACAAGGCACATATCTGGTGGGTCCGGTGACTTTTGCCGGTCCGTGCAAAAGCTTTCCGATCACCCTCGAAAATCAAGGAACTGTGAAGGCCACAACCGATATTAGTGAATATTCATCTCCTGAATGGTTCTCCATTGAAGATATTACTGGCTTCATCCTCACCGGCTCCGGCGTCTTTGACGGTCAAGGCGTCACCGTTTGGCCCTATAATGACTGCAAGAAAAACAGATTTTGCCAACTTCTTCCAATCTCGATTAAATTCTCGAGATTAAATCACACGATCGTTGATGGGCTCACTTCAGTAAACAGCATGGGGTTCCACACTTCCGTATTCTACTGTTACAATTTCACTGCTACTAACATGAAAATTATAGCTCCACATAATAGTCCGAACACCGATGGAATGCACCTTAGCACCTCAAAATTGGTCACCATTACCAACAGTGTCATTGGCACCGGTGATGATTGTGTCTCCATCGGCCACAGTACTGAGAATATCGTTGTCACCAATGTCACTTGCGGCCCAGGACATGGCCTCAGGTAA

Coding sequence (CDS)

ATGACAACATGGATTGCAGCTTGCCGGAATACAGTCGGTCCGGCGAAGTTCTTGATCCCACAAGGCACATATCTGGTGGGTCCGGTGACTTTTGCCGGTCCGTGCAAAAGCTTTCCGATCACCCTCGAAAATCAAGGAACTGTGAAGGCCACAACCGATATTAGTGAATATTCATCTCCTGAATGGTTCTCCATTGAAGATATTACTGGCTTCATCCTCACCGGCTCCGGCGTCTTTGACGGTCAAGGCGTCACCGTTTGGCCCTATAATGACTGCAAGAAAAACAGATTTTGCCAACTTCTTCCAATCTCGATTAAATTCTCGAGATTAAATCACACGATCGTTGATGGGCTCACTTCAGTAAACAGCATGGGGTTCCACACTTCCGTATTCTACTGTTACAATTTCACTGCTACTAACATGAAAATTATAGCTCCACATAATAGTCCGAACACCGATGGAATGCACCTTAGCACCTCAAAATTGGTCACCATTACCAACAGTGTCATTGGCACCGGTGATGATTGTGTCTCCATCGGCCACAGTACTGAGAATATCGTTGTCACCAATGTCACTTGCGGCCCAGGACATGGCCTCAGGTAA

Protein sequence

MTTWIAACRNTVGPAKFLIPQGTYLVGPVTFAGPCKSFPITLENQGTVKATTDISEYSSPEWFSIEDITGFILTGSGVFDGQGVTVWPYNDCKKNRFCQLLPISIKFSRLNHTIVDGLTSVNSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIGHSTENIVVTNVTCGPGHGLR

Homology

[Close]

BLAST of Cmc01g0030291 vs. NCBI nr
Match: KAA0048658.1 (exopolygalacturonase-like [Cucumis melo var. makuwa])

HSP 1 Score: 418.7 bits (1075), Expect = 2.8e-113
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0


Query: 1   MTTWIAACRNTVGPAKFLIPQGTYLVGPVTFAGPCKSFPITLENQGTVKATTDISEYSSP 60
           MTTWIAACRNTVGPAKFLIPQGTYLVGPVTFAGPCKSFPITLENQGTVKATTDISEYSSP
Sbjct: 1   MTTWIAACRNTVGPAKFLIPQGTYLVGPVTFAGPCKSFPITLENQGTVKATTDISEYSSP 60

Query: 61  EWFSIEDITGFILTGSGVFDGQGVTVWPYNDCKKNRFCQLLPISIKFSRLNHTIVDGLTS 120
           EWFSIEDITGFILTGSGVFDGQGVTVWPYNDCKKNRFCQLLPISIKFSRLNHTIVDGLTS
Sbjct: 61  EWFSIEDITGFILTGSGVFDGQGVTVWPYNDCKKNRFCQLLPISIKFSRLNHTIVDGLTS 120

Query: 121 VNSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIG 180
           VNSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIG
Sbjct: 121 VNSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIG 180

Query: 181 HSTENIVVTNVTCGPGHGL 200
           HSTENIVVTNVTCGPGHGL
Sbjct: 181 HSTENIVVTNVTCGPGHGL 199

[Close]

BLAST of Cmc01g0030291 vs. NCBI nr
Match: KAA0048661.1 (exopolygalacturonase-like [Cucumis melo var. makuwa] >KAA0048665.1 exopolygalacturonase-like [Cucumis melo var. makuwa] >TYK18163.1 exopolygalacturonase-like [Cucumis melo var. makuwa])

HSP 1 Score: 418.7 bits (1075), Expect = 2.8e-113
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0


Query: 1   MTTWIAACRNTVGPAKFLIPQGTYLVGPVTFAGPCKSFPITLENQGTVKATTDISEYSSP 60
           MTTWIAACRNTVGPAKFLIPQGTYLVGPVTFAGPCKSFPITLENQGTVKATTDISEYSSP
Sbjct: 108 MTTWIAACRNTVGPAKFLIPQGTYLVGPVTFAGPCKSFPITLENQGTVKATTDISEYSSP 167

Query: 61  EWFSIEDITGFILTGSGVFDGQGVTVWPYNDCKKNRFCQLLPISIKFSRLNHTIVDGLTS 120
           EWFSIEDITGFILTGSGVFDGQGVTVWPYNDCKKNRFCQLLPISIKFSRLNHTIVDGLTS
Sbjct: 168 EWFSIEDITGFILTGSGVFDGQGVTVWPYNDCKKNRFCQLLPISIKFSRLNHTIVDGLTS 227

Query: 121 VNSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIG 180
           VNSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIG
Sbjct: 228 VNSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIG 287

Query: 181 HSTENIVVTNVTCGPGHGL 200
           HSTENIVVTNVTCGPGHGL
Sbjct: 288 HSTENIVVTNVTCGPGHGL 306

[Close]

BLAST of Cmc01g0030291 vs. NCBI nr
Match: KAA0043575.1 (exopolygalacturonase-like [Cucumis melo var. makuwa])

HSP 1 Score: 418.7 bits (1075), Expect = 2.8e-113
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0


Query: 1   MTTWIAACRNTVGPAKFLIPQGTYLVGPVTFAGPCKSFPITLENQGTVKATTDISEYSSP 60
           MTTWIAACRNTVGPAKFLIPQGTYLVGPVTFAGPCKSFPITLENQGTVKATTDISEYSSP
Sbjct: 108 MTTWIAACRNTVGPAKFLIPQGTYLVGPVTFAGPCKSFPITLENQGTVKATTDISEYSSP 167

Query: 61  EWFSIEDITGFILTGSGVFDGQGVTVWPYNDCKKNRFCQLLPISIKFSRLNHTIVDGLTS 120
           EWFSIEDITGFILTGSGVFDGQGVTVWPYNDCKKNRFCQLLPISIKFSRLNHTIVDGLTS
Sbjct: 168 EWFSIEDITGFILTGSGVFDGQGVTVWPYNDCKKNRFCQLLPISIKFSRLNHTIVDGLTS 227

Query: 121 VNSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIG 180
           VNSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIG
Sbjct: 228 VNSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIG 287

Query: 181 HSTENIVVTNVTCGPGHGL 200
           HSTENIVVTNVTCGPGHGL
Sbjct: 288 HSTENIVVTNVTCGPGHGL 306

[Close]

BLAST of Cmc01g0030291 vs. NCBI nr
Match: XP_031745094.1 (exopolygalacturonase-like [Cucumis sativus])

HSP 1 Score: 403.3 bits (1035), Expect = 1.2e-108
Identity = 190/199 (95.48%), Postives = 194/199 (97.49%), Query Frame = 0


Query: 1   MTTWIAACRNTVGPAKFLIPQGTYLVGPVTFAGPCKSFPITLENQGTVKATTDISEYSSP 60
           MTTWIAACRNTVGPAKFLIPQGT+LVGPVTFAGPCKSFPITLENQGTVKATTDIS YSSP
Sbjct: 104 MTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSFPITLENQGTVKATTDISAYSSP 163

Query: 61  EWFSIEDITGFILTGSGVFDGQGVTVWPYNDCKKNRFCQLLPISIKFSRLNHTIVDGLTS 120
           EWFSIEDITGFILTGSGVFDGQG++VWPYNDCKKN  CQLLPISIKF+RLNHTIVDGLTS
Sbjct: 164 EWFSIEDITGFILTGSGVFDGQGLSVWPYNDCKKNNLCQLLPISIKFTRLNHTIVDGLTS 223

Query: 121 VNSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIG 180
           VNSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTI NSVIGTGDDCVSIG
Sbjct: 224 VNSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIG 283

Query: 181 HSTENIVVTNVTCGPGHGL 200
           HSTENI VTNVTCGPGHGL
Sbjct: 284 HSTENITVTNVTCGPGHGL 302

[Close]

BLAST of Cmc01g0030291 vs. NCBI nr
Match: XP_031745095.1 (exopolygalacturonase-like [Cucumis sativus])

HSP 1 Score: 403.3 bits (1035), Expect = 1.2e-108
Identity = 190/199 (95.48%), Postives = 194/199 (97.49%), Query Frame = 0


Query: 1   MTTWIAACRNTVGPAKFLIPQGTYLVGPVTFAGPCKSFPITLENQGTVKATTDISEYSSP 60
           MTTWIAACRNTVGPAKFLIPQGT+LVGPVTFAGPCKSFPITLENQGTVKATTDIS YSSP
Sbjct: 104 MTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSFPITLENQGTVKATTDISAYSSP 163

Query: 61  EWFSIEDITGFILTGSGVFDGQGVTVWPYNDCKKNRFCQLLPISIKFSRLNHTIVDGLTS 120
           EWFSIEDITGFILTGSGVFDGQG++VWPYNDCKKN  CQLLPISIKF+RLNHTIVDGLTS
Sbjct: 164 EWFSIEDITGFILTGSGVFDGQGLSVWPYNDCKKNNLCQLLPISIKFTRLNHTIVDGLTS 223

Query: 121 VNSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIG 180
           VNSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTI NSVIGTGDDCVSIG
Sbjct: 224 VNSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIG 283

Query: 181 HSTENIVVTNVTCGPGHGL 200
           HSTENI VTNVTCGPGHGL
Sbjct: 284 HSTENITVTNVTCGPGHGL 302

[Close]

BLAST of Cmc01g0030291 vs. ExPASy Swiss-Prot
Match: P49062 (Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana OX=3702 GN=PGA3 PE=2 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 2.5e-48
Identity = 94/199 (47.24%), Postives = 127/199 (63.82%), Query Frame = 0


Query: 1   MTTWIAACRNTVGPAKFLIPQGTYLVGPVTFAGPCKSFPITLENQGTVKATTDISEYSSP 60
           + TWI  C + V PA  L+P+GT+L GPV FAGPCKS  +T+   GT+ ATT  S Y++P
Sbjct: 72  LNTWIQVCDSPV-PATLLVPKGTFLAGPVIFAGPCKS-KVTVNVIGTIIATT--SGYATP 131

Query: 61  EWFSIEDITGFILTGSGVFDGQGVTVWPYNDCKKNRFCQLLPISIKFSRLNHTIVDGLTS 120
           EWF  E +   +LTG+G F G+G  VW  + C K   C L P S+KF  + +  ++G++S
Sbjct: 132 EWFLFERVDNLVLTGTGTFHGKGEAVWKADGCGKKVQCNLPPTSLKFRNMKNVEINGISS 191

Query: 121 VNSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIG 180
           VN+  FH  +    N    N+K+ AP  SPNTDG+HLS +  V+I +S I TGDDCVS+G
Sbjct: 192 VNAKAFHMFLVKTENVNIQNIKLTAPAESPNTDGIHLSNADNVSILDSTIATGDDCVSVG 251

Query: 181 HSTENIVVTNVTCGPGHGL 200
             + N+ V  V CGPGHGL
Sbjct: 252 RGSNNVTVERVICGPGHGL 266

[Close]

BLAST of Cmc01g0030291 vs. ExPASy Swiss-Prot
Match: Q6H9K0 (Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 5.3e-46
Identity = 89/199 (44.72%), Postives = 122/199 (61.31%), Query Frame = 0


Query: 1   MTTWIAACRNTVGPAKFLIPQGTYLVGPVTFAGPCKSFPITLENQGTVKATTDISEYSSP 60
           M  W AAC +  GP+  LIP+G Y +G V   GPCK   I  +  G VKA  D S++ S 
Sbjct: 28  MKAWKAACASQ-GPSTVLIPKGNYNMGEVAMQGPCKGSKIGFQIDGVVKAPADPSKFKSD 87

Query: 61  EWFSIEDITGFILTGSGVFDGQGVTVWPYNDCKKNRFCQLLPISIKFSRLNHTIVDGLTS 120
            W S   I G  ++G+G  DGQG T W  N+C KN  C+   ++++F  L H +V  +TS
Sbjct: 88  GWVSFYRIDGLTVSGTGTLDGQGQTAWAKNNCDKNPNCKHAAMNLRFDFLKHAMVRDITS 147

Query: 121 VNSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIG 180
           +NS  FH +V  C + T  ++ + AP  S NTDG+H+  SK VTITN+ I TGDDC+SIG
Sbjct: 148 LNSKMFHINVLECEDITFQHVTVTAPGTSINTDGIHVGISKGVTITNTKIATGDDCISIG 207

Query: 181 HSTENIVVTNVTCGPGHGL 200
             ++N+ +T V CGPGHG+
Sbjct: 208 PGSQNVTITQVNCGPGHGI 225

[Close]

BLAST of Cmc01g0030291 vs. ExPASy Swiss-Prot
Match: P35339 (Exopolygalacturonase OS=Zea mays OX=4577 GN=PG2C PE=2 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 5.3e-46
Identity = 88/197 (44.67%), Postives = 123/197 (62.44%), Query Frame = 0


Query: 4   WIAACRNTVGPAKFLIPQGTYLVGPVTFAGPCKSFPITLENQGTVKATTDISEYSS-PEW 63
           W +AC  T G    LIP+G +LVGP+ F GPCK   +T++  G + ATTD+S+Y     W
Sbjct: 64  WASACGGT-GKQTILIPKGDFLVGPLNFTGPCKG-DVTIQVNGNLLATTDLSQYKDHGNW 123

Query: 64  FSIEDITGFILTGSGVFDGQGVTVWPYNDCKKNRFCQLLPISIKFSRLNHTIVDGLTSVN 123
             I  +   ++TG G  DGQG  VW  N C K   C++LP S+    +N+  V G+T +N
Sbjct: 124 IEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGITLLN 183

Query: 124 SMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIGHS 183
           S  FH +++ C +    ++ + AP +SPNTDG+H+  S  VTITN+VIG GDDC+SIG  
Sbjct: 184 SKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGPG 243

Query: 184 TENIVVTNVTCGPGHGL 200
           T  + +T VTCGPGHG+
Sbjct: 244 TSKVNITGVTCGPGHGI 258

[Close]

BLAST of Cmc01g0030291 vs. ExPASy Swiss-Prot
Match: P35338 (Exopolygalacturonase OS=Zea mays OX=4577 GN=PG9 PE=2 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 2.0e-45
Identity = 87/197 (44.16%), Postives = 122/197 (61.93%), Query Frame = 0


Query: 4   WIAACRNTVGPAKFLIPQGTYLVGPVTFAGPCKSFPITLENQGTVKATTDISEYSS-PEW 63
           W +AC  T G    LIP+G +LVG + F GPCK   +T++  G + ATTD+S+Y     W
Sbjct: 64  WASACGGT-GKQTILIPKGDFLVGQLNFTGPCKG-DVTIQVDGNLLATTDLSQYKEHGNW 123

Query: 64  FSIEDITGFILTGSGVFDGQGVTVWPYNDCKKNRFCQLLPISIKFSRLNHTIVDGLTSVN 123
             I  +   ++TG G  DGQG  VW  N C K   C++LP S+    +N+  V G+T +N
Sbjct: 124 IEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLLN 183

Query: 124 SMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIGHS 183
           S  FH +++ C N    ++ + AP +SPNTDG+H+  S  +TITN+VIG GDDC+SIG  
Sbjct: 184 SKFFHMNMYQCKNMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPG 243

Query: 184 TENIVVTNVTCGPGHGL 200
           T  + +T VTCGPGHG+
Sbjct: 244 TSKVNITGVTCGPGHGI 258

[Close]

BLAST of Cmc01g0030291 vs. ExPASy Swiss-Prot
Match: P26216 (Exopolygalacturonase OS=Zea mays OX=4577 GN=PG1 PE=1 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.0e-44
Identity = 86/197 (43.65%), Postives = 122/197 (61.93%), Query Frame = 0


Query: 4   WIAACRNTVGPAKFLIPQGTYLVGPVTFAGPCKSFPITLENQGTVKATTDISEYSS-PEW 63
           W +AC  T G    LIP+G +LVG + F GPCK   +T++  G + ATTD+S+Y     W
Sbjct: 64  WASACGGT-GKQTILIPKGDFLVGQLNFTGPCKG-DVTIQVDGNLLATTDLSQYKDHGNW 123

Query: 64  FSIEDITGFILTGSGVFDGQGVTVWPYNDCKKNRFCQLLPISIKFSRLNHTIVDGLTSVN 123
             I  +   ++TG G  DGQG  VW  N C K   C++LP S+    +N+  V G+T +N
Sbjct: 124 IEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLLN 183

Query: 124 SMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIGHS 183
           S  FH +++ C +    ++ + AP +SPNTDG+H+  S  +TITN+VIG GDDC+SIG  
Sbjct: 184 SKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPG 243

Query: 184 TENIVVTNVTCGPGHGL 200
           T  + +T VTCGPGHG+
Sbjct: 244 TSKVNITGVTCGPGHGI 258

[Close]

BLAST of Cmc01g0030291 vs. ExPASy TrEMBL
Match: A0A5A7U4W1 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00950 PE=3 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 1.4e-113
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0


Query: 1   MTTWIAACRNTVGPAKFLIPQGTYLVGPVTFAGPCKSFPITLENQGTVKATTDISEYSSP 60
           MTTWIAACRNTVGPAKFLIPQGTYLVGPVTFAGPCKSFPITLENQGTVKATTDISEYSSP
Sbjct: 108 MTTWIAACRNTVGPAKFLIPQGTYLVGPVTFAGPCKSFPITLENQGTVKATTDISEYSSP 167

Query: 61  EWFSIEDITGFILTGSGVFDGQGVTVWPYNDCKKNRFCQLLPISIKFSRLNHTIVDGLTS 120
           EWFSIEDITGFILTGSGVFDGQGVTVWPYNDCKKNRFCQLLPISIKFSRLNHTIVDGLTS
Sbjct: 168 EWFSIEDITGFILTGSGVFDGQGVTVWPYNDCKKNRFCQLLPISIKFSRLNHTIVDGLTS 227

Query: 121 VNSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIG 180
           VNSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIG
Sbjct: 228 VNSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIG 287

Query: 181 HSTENIVVTNVTCGPGHGL 200
           HSTENIVVTNVTCGPGHGL
Sbjct: 288 HSTENIVVTNVTCGPGHGL 306

[Close]

BLAST of Cmc01g0030291 vs. ExPASy TrEMBL
Match: A0A5A7U0D6 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold670G00070 PE=3 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 1.4e-113
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0


Query: 1   MTTWIAACRNTVGPAKFLIPQGTYLVGPVTFAGPCKSFPITLENQGTVKATTDISEYSSP 60
           MTTWIAACRNTVGPAKFLIPQGTYLVGPVTFAGPCKSFPITLENQGTVKATTDISEYSSP
Sbjct: 1   MTTWIAACRNTVGPAKFLIPQGTYLVGPVTFAGPCKSFPITLENQGTVKATTDISEYSSP 60

Query: 61  EWFSIEDITGFILTGSGVFDGQGVTVWPYNDCKKNRFCQLLPISIKFSRLNHTIVDGLTS 120
           EWFSIEDITGFILTGSGVFDGQGVTVWPYNDCKKNRFCQLLPISIKFSRLNHTIVDGLTS
Sbjct: 61  EWFSIEDITGFILTGSGVFDGQGVTVWPYNDCKKNRFCQLLPISIKFSRLNHTIVDGLTS 120

Query: 121 VNSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIG 180
           VNSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIG
Sbjct: 121 VNSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIG 180

Query: 181 HSTENIVVTNVTCGPGHGL 200
           HSTENIVVTNVTCGPGHGL
Sbjct: 181 HSTENIVVTNVTCGPGHGL 199

[Close]

BLAST of Cmc01g0030291 vs. ExPASy TrEMBL
Match: A0A5A7TQ89 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36913G00010 PE=3 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 1.4e-113
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0


Query: 1   MTTWIAACRNTVGPAKFLIPQGTYLVGPVTFAGPCKSFPITLENQGTVKATTDISEYSSP 60
           MTTWIAACRNTVGPAKFLIPQGTYLVGPVTFAGPCKSFPITLENQGTVKATTDISEYSSP
Sbjct: 108 MTTWIAACRNTVGPAKFLIPQGTYLVGPVTFAGPCKSFPITLENQGTVKATTDISEYSSP 167

Query: 61  EWFSIEDITGFILTGSGVFDGQGVTVWPYNDCKKNRFCQLLPISIKFSRLNHTIVDGLTS 120
           EWFSIEDITGFILTGSGVFDGQGVTVWPYNDCKKNRFCQLLPISIKFSRLNHTIVDGLTS
Sbjct: 168 EWFSIEDITGFILTGSGVFDGQGVTVWPYNDCKKNRFCQLLPISIKFSRLNHTIVDGLTS 227

Query: 121 VNSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIG 180
           VNSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIG
Sbjct: 228 VNSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIG 287

Query: 181 HSTENIVVTNVTCGPGHGL 200
           HSTENIVVTNVTCGPGHGL
Sbjct: 288 HSTENIVVTNVTCGPGHGL 306

[Close]

BLAST of Cmc01g0030291 vs. ExPASy TrEMBL
Match: A0A0A0KMA6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G222970 PE=3 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 3.9e-108
Identity = 186/199 (93.47%), Postives = 194/199 (97.49%), Query Frame = 0


Query: 1   MTTWIAACRNTVGPAKFLIPQGTYLVGPVTFAGPCKSFPITLENQGTVKATTDISEYSSP 60
           MTTWIAACRNTVGPAKFLIPQGT+LVGPVTFAGPCKS+PITLENQGTVKATTDIS YSSP
Sbjct: 76  MTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSYPITLENQGTVKATTDISAYSSP 135

Query: 61  EWFSIEDITGFILTGSGVFDGQGVTVWPYNDCKKNRFCQLLPISIKFSRLNHTIVDGLTS 120
           EWFS+EDITGFILTGSGVFDGQG++VWPYNDCKKN  CQLLPISIKF+RLNHTIVDGLTS
Sbjct: 136 EWFSLEDITGFILTGSGVFDGQGLSVWPYNDCKKNNLCQLLPISIKFTRLNHTIVDGLTS 195

Query: 121 VNSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIG 180
           +NSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTI NS+IGTGDDCVSIG
Sbjct: 196 INSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSIIGTGDDCVSIG 255

Query: 181 HSTENIVVTNVTCGPGHGL 200
           HSTENI VTNVTCGPGHGL
Sbjct: 256 HSTENITVTNVTCGPGHGL 274

[Close]

BLAST of Cmc01g0030291 vs. ExPASy TrEMBL
Match: A0A5D3C9J8 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold886G00530 PE=3 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 6.2e-98
Identity = 172/199 (86.43%), Postives = 181/199 (90.95%), Query Frame = 0


Query: 1   MTTWIAACRNTVGPAKFLIPQGTYLVGPVTFAGPCKSFPITLENQGTVKATTDISEYSSP 60
           +TTWI ACRNTVGPAK LIP+GTYLVGPVT AGPCKSFPITLENQGTVKATTDIS+YSSP
Sbjct: 107 VTTWIEACRNTVGPAKILIPEGTYLVGPVTLAGPCKSFPITLENQGTVKATTDISQYSSP 166

Query: 61  EWFSIEDITGFILTGSGVFDGQGVTVWPYNDCKKNRFCQLLPISIKFSRLNHTIVDGLTS 120
           EWFSIEDITGFILTGSGVFDGQGV  WPYNDCK N  CQLLPISIKFSRLN TIVD LTS
Sbjct: 167 EWFSIEDITGFILTGSGVFDGQGVAAWPYNDCKNNNICQLLPISIKFSRLNDTIVDRLTS 226

Query: 121 VNSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIG 180
           +NS GFH S+F CYNFTATN+ IIAPH+SPNTDG+HLSTSKLV I NS+IGTGDDCVSIG
Sbjct: 227 LNSKGFHMSLFSCYNFTATNINIIAPHDSPNTDGIHLSTSKLVNIANSIIGTGDDCVSIG 286

Query: 181 HSTENIVVTNVTCGPGHGL 200
           HSTE I VTNVTCGPGHGL
Sbjct: 287 HSTEKITVTNVTCGPGHGL 305

[Close]

BLAST of Cmc01g0030291 vs. TAIR 10
Match: AT1G02790.1 (polygalacturonase 4 )

HSP 1 Score: 193.4 bits (490), Expect = 1.8e-49
Identity = 94/199 (47.24%), Postives = 127/199 (63.82%), Query Frame = 0


Query: 1   MTTWIAACRNTVGPAKFLIPQGTYLVGPVTFAGPCKSFPITLENQGTVKATTDISEYSSP 60
           + TWI  C + V PA  L+P+GT+L GPV FAGPCKS  +T+   GT+ ATT  S Y++P
Sbjct: 72  LNTWIQVCDSPV-PATLLVPKGTFLAGPVIFAGPCKS-KVTVNVIGTIIATT--SGYATP 131

Query: 61  EWFSIEDITGFILTGSGVFDGQGVTVWPYNDCKKNRFCQLLPISIKFSRLNHTIVDGLTS 120
           EWF  E +   +LTG+G F G+G  VW  + C K   C L P S+KF  + +  ++G++S
Sbjct: 132 EWFLFERVDNLVLTGTGTFHGKGEAVWKADGCGKKVQCNLPPTSLKFRNMKNVEINGISS 191

Query: 121 VNSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIG 180
           VN+  FH  +    N    N+K+ AP  SPNTDG+HLS +  V+I +S I TGDDCVS+G
Sbjct: 192 VNAKAFHMFLVKTENVNIQNIKLTAPAESPNTDGIHLSNADNVSILDSTIATGDDCVSVG 251

Query: 181 HSTENIVVTNVTCGPGHGL 200
             + N+ V  V CGPGHGL
Sbjct: 252 RGSNNVTVERVICGPGHGL 266

[Close]

BLAST of Cmc01g0030291 vs. TAIR 10
Match: AT4G18180.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 181.8 bits (460), Expect = 5.4e-46
Identity = 87/201 (43.28%), Postives = 123/201 (61.19%), Query Frame = 0


Query: 1   MTTWIAACRNTVGPAKFLIPQGTYLVGPVTFAGPCKSFP-ITLENQGTVKATTDISEY-S 60
           +  W  AC+++      +IP+G + VG + F+GPC +   +T+     VKA+TD+S+Y S
Sbjct: 55  VAAWDKACKSSSSSVNLIIPRGEFSVGSLRFSGPCTNVSNLTVR----VKASTDLSKYRS 114

Query: 61  SPEWFSIEDITGFILTGSGVFDGQGVTVWPYNDCKKNRFCQLLPISIKFSRLNHTIVDGL 120
              W     I G  LTG G FDGQG   WP+N+C  +  C+LLP S+KF  +N T+V  +
Sbjct: 115 GGGWIQFGWINGLTLTGGGTFDGQGALAWPFNNCTSDSNCKLLPTSLKFVGMNRTVVRRI 174

Query: 121 TSVNSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTITNSVIGTGDDCVS 180
           +SVNS  FH ++  C +F  T + I AP +SPNTDG+H+  S  V  + S I TGDDCVS
Sbjct: 175 SSVNSKFFHIALVECRDFKGTRLNITAPSDSPNTDGIHIERSSNVYFSRSHIATGDDCVS 234

Query: 181 IGHSTENIVVTNVTCGPGHGL 200
           IG     I +T++ CGPGHG+
Sbjct: 235 IGQGNSQITITSIKCGPGHGI 251

[Close]

BLAST of Cmc01g0030291 vs. TAIR 10
Match: AT3G07820.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 171.0 bits (432), Expect = 9.6e-43
Identity = 84/199 (42.21%), Postives = 125/199 (62.81%), Query Frame = 0


Query: 1   MTTWIAACRNTVGPAKFLIPQGTYLVGPVTFAGPCKSFPITLENQGTVKATTDISEYSSP 60
           +  + +AC+++  P+K +IP+G + +G +   GPCK+ PI +  QGTVKA  +  +    
Sbjct: 40  LKAFTSACQSS-SPSKVVIPKGEFKLGEIEMRGPCKA-PIEVTLQGTVKADGNAIQ-GKE 99

Query: 61  EWFSIEDITGFILTGSGVFDGQGVTVWPYNDCKKNRFCQLLPISIKFSRLNHTIVDGLTS 120
           +W    +I GF L G G FDG+G   W  N+C K   C+ LPISI+F  + ++ +  ++S
Sbjct: 100 KWVVFGNIDGFKLNGGGAFDGEGNAAWRVNNCHKTFECKKLPISIRFDFILNSEIRDISS 159

Query: 121 VNSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIG 180
           +++  FH +V    N T  N+KI+AP +SPNTDG+HL  S  V I NS I TGDDC+S+G
Sbjct: 160 IDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGVKILNSFISTGDDCISVG 219

Query: 181 HSTENIVVTNVTCGPGHGL 200
              +N+ V  VTCGPGHG+
Sbjct: 220 DGMKNLHVEKVTCGPGHGI 235

[Close]

BLAST of Cmc01g0030291 vs. TAIR 10
Match: AT5G48140.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 167.5 bits (423), Expect = 1.1e-41
Identity = 83/182 (45.60%), Postives = 114/182 (62.64%), Query Frame = 0


Query: 18  LIPQGTYLVGPVTFAGPCKSFPITLENQGTVKATTDISEYSSPEWFSIEDITGFILTGSG 77
           +IP+G Y +G +   GPCK+ PI +   GTVKA  D +     +W +  +I GF L G G
Sbjct: 57  MIPKGEYKLGEIVMMGPCKA-PIRIALLGTVKA--DGNANGKEKWVAFRNINGFKLNGGG 116

Query: 78  VFDGQGVTVWPYNDCKKNRFCQLLPISIKFSRLNHTIVDGLTSVNSMGFHTSVFYCYNFT 137
           VFDG+G   W  N+C K   C+ LPISI+F  +    + G+TS+++  FH +V    N T
Sbjct: 117 VFDGEGNAAWRVNNCHKTFNCKKLPISIRFDFVTDAKIRGITSLDAKHFHINVIGAKNVT 176

Query: 138 ATNMKIIAPHNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIGHSTENIVVTNVTCGPGH 197
             ++KIIAP  SPNTDG+H+  S  + I NS I TGDDCVS+G   +N++V  VTCGPGH
Sbjct: 177 FEDVKIIAPAESPNTDGIHVGRSDGIKIINSFISTGDDCVSVGDGMKNLLVERVTCGPGH 235

Query: 198 GL 200
           G+
Sbjct: 237 GI 235

[Close]

BLAST of Cmc01g0030291 vs. TAIR 10
Match: AT2G26620.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 167.2 bits (422), Expect = 1.4e-41
Identity = 77/196 (39.29%), Postives = 118/196 (60.20%), Query Frame = 0


Query: 4   WIAACRNTVGPAKFLIPQGTYLVGPVTFAGPCKSFPITLENQGTVKATTDISEYSSPEWF 63
           W  AC+   G +K  +P+GT+ +G V F GPCK+ PI     GT+ A  + ++     W 
Sbjct: 54  WSRACKRISGSSKIYVPKGTFYLGGVEFVGPCKN-PIEFIIDGTLLAPANPNDIKQDTWI 113

Query: 64  SIEDITGFILTGSGVFDGQGVTVWPYNDCKKNRFCQLLPISIKFSRLNHTIVDGLTSVNS 123
           +   I    ++GSG  DGQG   WP NDC KN  C  L IS+ F+ +N++ +  +TS+NS
Sbjct: 114 NFRYINNLSISGSGTLDGQGKQSWPLNDCHKNPNCPKLAISMGFAFVNNSNIKDITSLNS 173

Query: 124 MGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIGHST 183
              H + F+ ++F  T + I AP +SPNTDG+ + +   + I+N+ IGTGDDC++I   T
Sbjct: 174 KMGHFNFFFVHHFNITGVTITAPSDSPNTDGIKMGSCSNIQISNTNIGTGDDCIAILSGT 233

Query: 184 ENIVVTNVTCGPGHGL 200
             + ++N+ CGPGHG+
Sbjct: 234 TKLNISNINCGPGHGI 248

The following BLAST results are available for this feature:

BLAST of Cmc01g0030291 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0048658.1	2.8e-113	100.00	exopolygalacturonase-like [Cucumis melo var. makuwa]	[more]
KAA0048661.1	2.8e-113	100.00	exopolygalacturonase-like [Cucumis melo var. makuwa] >KAA0048665.1 exopolygalact...	[more]
KAA0043575.1	2.8e-113	100.00	exopolygalacturonase-like [Cucumis melo var. makuwa]	[more]
XP_031745094.1	1.2e-108	95.48	exopolygalacturonase-like [Cucumis sativus]	[more]
XP_031745095.1	1.2e-108	95.48	exopolygalacturonase-like [Cucumis sativus]	[more]

BLAST of Cmc01g0030291 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P49062	2.5e-48	47.24	Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana OX=3702 GN=PGA3 PE=2 ...	[more]
Q6H9K0	5.3e-46	44.72	Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 S...	[more]
P35339	5.3e-46	44.67	Exopolygalacturonase OS=Zea mays OX=4577 GN=PG2C PE=2 SV=1	[more]
P35338	2.0e-45	44.16	Exopolygalacturonase OS=Zea mays OX=4577 GN=PG9 PE=2 SV=1	[more]
P26216	1.0e-44	43.65	Exopolygalacturonase OS=Zea mays OX=4577 GN=PG1 PE=1 SV=1	[more]

BLAST of Cmc01g0030291 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U4W1	1.4e-113	100.00	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A5A7U0D6	1.4e-113	100.00	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A5A7TQ89	1.4e-113	100.00	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A0A0KMA6	3.9e-108	93.47	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G222970 PE=3 SV=1	[more]
A0A5D3C9J8	6.2e-98	86.43	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]

BLAST of Cmc01g0030291 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G02790.1	1.8e-49	47.24	polygalacturonase 4	[more]
AT4G18180.1	5.4e-46	43.28	Pectin lyase-like superfamily protein	[more]
AT3G07820.1	9.6e-43	42.21	Pectin lyase-like superfamily protein	[more]
AT5G48140.1	1.1e-41	45.60	Pectin lyase-like superfamily protein	[more]
AT2G26620.1	1.4e-41	39.29	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 2..200 e-value: 2.9E-52 score: 180.0
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 12..199 e-value: 6.0E-49 score: 166.8
None	No IPR available	PANTHER	PTHR31375:SF158	POLYGALACTURONASE	coord: 1..199
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 1..199
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 5..199

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc01g0030291.1	Cmc01g0030291.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity