Cmc01g0026341 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc01g0026341
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Poly(A)-specific ribonuclease PARN-like
Location	CMiso1.1chr01: 27303850 .. 27311018 (+)
RNA-Seq Expression	Cmc01g0026341
Synteny	Cmc01g0026341

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGTTTATCATAAGTCCAAATCTCATAACCCAAACCACGATAGTTAAGCAGACTCACTCTTCATAGGAGAGTCTTGGTAAAGCTTGCCATATGAAACAGAGCTCGCAACTCATTTCGCCACTTCCGCCATGAATTTTGAATGAGAGCTTAAACGGGAAAACTATGGCGTCTCGGTTCTCATATTTCCAGCTGCACAGACGCCTCTATACAACAACCACCGATCAATGGAGTATCAAGCAAGTTCGCAATTCCAACTTCCATAGCTGCTTGGGGGACCTGAAGAACCACATCTCCGATTCCGACTTCATCGCACTTTCTCTTCAGAGAACGGGTTCTTCTTCTTTCCCTTGGCACCGCCCTCAGCCCTTCGACACTCTCGATACCGCTTATTGCAAGGCCAAGTACGCCGCCGAGAAGTTTCAGATTCTTCAGTTTTCTCTCTGTCCTTTCTCTGTTAGGGATTCCAAGCTAATCGCCCATCCGTAAGTTCCCCCAGGCCGCCGCGTATCTTCATGTTTGGATGTTTGGAGTTTTGTACTCTTGGGCAGGATTTGGGAATTGGGTGTTTCTTTATTTTGATTGATGAATATTTCTCCGCACTTGCAATGAATTTGGTTTCTTTCACTGGAATTTAAAGTAGGGACGAGGAGTATATTCTGTAGTATTCATAGATGAGTATGATTTATAATGGAAAGTTTGATGCTTTCTGGCTGATATTTTATTATGGCTTTTGCTCGTGGTCTGTCCGTTCATCATCATTTTAAACTCTAAATAGGAAGTCTCTTCTATTATTTGGTGATTGATACAAATTTGATTGATGAAAATGTGTTTCATTGAATGGTGTAGGTACAACTTTCATTTGTTCCCCAGAGATGAACTGAACATTGGGATGCCATCTTACAGTTTTTCATGTCAAGTTTCACATCTAACATCCATAGCTCGTGAAGGTTTTGACTTTGGTGCTTGGGTATATGATGGTAAGCCTAATTGTGGACAATTTACTTCTGTTTCACCCTCACTAATAGAGGAGAAATTCTAAAACCCAGATTTCCAATCCCTAAACCACCTTCCTTTCAAGGTTTCAGCAAGAGCAGAGGTTGAATTTGAGAGGCATTCTTTAGAAAGAAAACAGTCTCTTTGACCCTTGAAATTCTGTTCCCATTATCAAGCTCAAGAGAAGAACTTCGGTTCTTAAGTCTCCTGAAATGAAAATAAGATGTCTCACGATTACGTTCACTAATTCACTCTGTCTTGGACTATATTTTGTTCATCTCTTCTGTTCGAATAAGAATCTCAGGATCCCCCTTCAATCTGATTAACTCTTCCCATGCTACACTCAAAATCCTCACAGACTCCAAGTCATGTAAAATGTTTATCTTATTAGTTATCTTCTATTTTTTAGTGAAAGAACTTTTGAAGACCCTCAGGTTCCAGCCTCTAGACTTGAACTTTAGGGACTCCAATCTTATTGTAAACCCAAGTACCTCCCATCTACCAACCATATCAGCTGACCATTAGTCGAGCTTGGAAGACTTGAAAGAAGGATGCTTTATTCACACACTCCAAATATGAAACGACAAGGTCCCTGTCTTGTATCTGAGAACTTACCAAACGACCTGTTGTTGGTCAGATTCAACTATGGGACTCCAATGGCTTGATATCCTCCAAGAATTTTTTTTCTGCCCTTTAAGAGCAAAAACGTATCTACCTGGCAAGAAATGGGATTAATACACAGATTGGATAAAGTAATCTGACAGCATGAGGGGAGGATAAAATAAAATATACTCTTCAAGATACTTTTGGTAAGATTGCATCGGTCTAGATGATTGACTTCTCAAGACTTCTTTAGATAAAACTCTCATCACCAAAATTTCCAACCACAGACCAGCTAGATTCACTATTACAAATGCTGAAGGTGCCACTCAAGTCTTCGTACAAATCATCTTGTTTTGAGATTCATATGGCTCTTGTAGCAGTAGTACATTTGAACGCCAATCTTCCAAATTTTAGTTGGATCTACTTGTTTCGAGTAGTTTTTATCGACCTAAATATTATTTATCGCTTTCTTGATGCTTTATCTCTTGATTTTTGGGGAAAATTAAACCTTTGTTTTATCTTTATACTGAATTATGAAGTATCATCTATATTGCACTTGGACTTCTAATGGTCCTTTTCCTTTTTTTTTTTTTTTTTGGTTCCAGGCATATCATATTTATCCAGAGCTCAAGAGTCTATAGCAAAAGCTCAAATGGGCTGTCAAACTCTAACACCTAATACTGACGCTGTGAAATCTTCTTCTGAACCGTCAGTTTTTGATACCATTTTTGTTCAACGGGTTAAATCACGTGTAAAGAACTGGAAAGATGCATATGATTCAAGCTCAAAAACAAATGGTAATTTACAACTTAGTATTGCTTTCTAAAACAATTTCATCATGTTCTTTTCTTTCCATTTTGCTCTCGCATTTTTTAAACTATGTAGGTTAAAGAACACTTTCGGTTCTTGAACGTTTTTATTAAAGTAACAATTTTGCCTCTAAACTCTAGCTTGTAATGAATCTGATGATTTAATTTCTATACTTTCTAACTTGTTAAATTAAATGAGATTTATTGACCATGCATATCAATAAATTGATTAGGACCAAATGTGTTTTTAAACTACAAAGAAAAGAGATTTTGATGAGATTTTCATAGTAGGGATTAAATTGTTACAAGTTTGAAAGTAAAAGGATTGAATTGTTACATAGAAAAATTCAATGACTAAATTATTGCAAATTTAAAAGAACGATGGGTGAAATTGTTACAAAATTAAAGTTCAAACAAAATTGTTACTCGTATGGAGGTTGAAGGACTAAAGTGTTTTTTAACCTCTTTTATTTCTTTGTTTCCTGAAATAGTAAAGGTAATGTTTCCATAATATAGACGCATTGCTAAGTACGTTGAAAAAGCTCATAGTCGGTATTGAGCAGTATGGATCAAGACCATCTATTGTTATAGATGTTTATAGCGAACGGCAAACTCTACTTGCATTAGAGGTAACTTAACCTTTTCAAAATATGAGTGGTTCAACATGTGTATTGCTTGTTTTTAACTATGCTAAATTATTATGGACATTCTACATCTCCAGAGATATCCCCTTCCAGAGAAAAACCGTTATCTATAATTATGAATTATAGATCTCTGATCTCTCTATTTTCAATGTTATTATTTTTAGTAACTCTACATTTATGTTACACATTGTTTAAATAAAATAGCTTATCATGCATGTTATACACAATTTAAGGTAAAATTAATGATTTAATACGTGGACGTTTATGGTTGTCTATTTAATGACTTGACTTGAATAGTTTCCATTGCATTCCTGAAATTTAATTTATGTAATTTTTGCTCTTAATACTGGTACCATATAAATATTGGCTGATTTGATATGATATGATTGACGACAATTGAAAAAAGTGGATAGTTGGTCATGATCCAAATTAAGTGACACTTGCAATATGGCATTTTCGAAGCATTTTTTTTCTGTAGAACGTGCTGCCATTTTTGTCAAGCTGTTGCCCTCCTATCTTTTGTTTGCTATGTCATGCTTACTGAACCATGTTTATACAAAAGAACTACATGAAATTATTGTTCAAAGTTAATTACAACTCTAGTTAGAGTTTAGGGAGTAAATCTCTATAAGTTTATAACTGAGTTTAAAGGTCTCAATTGATGTAATATTACTATTGATTATGTTCCAGGACTTGTTTTTTTTAAAAAAATTTTGAAAGGGAAACAAGTCTCTTTTATTAATGATAATAATAATGAGACAAAAGCTCAAAGTACAAGAGAGTTATATGATGAGCAAAATATCCTAAGGGTGGCATCTCGATTATGTTCTACTGACTTGTTTTGGTCAGTTAATTAGTTATTGGGATTAAATCAATTTATACCCCCACATGTGCAAGATAAATCAAGTAAAACCAACCTTAAAATGTTTAAAATAAACTCAAATAACATTATTCTAGAAATTGTCACATAATAGAATTGATAGAATAGCATGTAAATGTGAAGGACAATTACTGTGAATTTTATTGAATAAATCATAATAATTCGGAATACATAAAGATGTTTTACGTAGGGAAATATATAGACCTCAAAGAAACCACTAAATGAAAATTCATGAATGGAAAAGATATAGACCTTAAAGAAGGTAGTGTGAGTAAAAACTCATGACTCTGAACTTACTAAATATGACACTAATAACAAAACGATGAACCAAGCAAAAACTATAATATCATTTCTGAAATGACCATCCCTTGCTAATGAAAGTTTTGTTTCTTATCAGGTAAAACCAAATCTAAAATGACTAAATTTAAGAGTGAATATATGCATTCCAATTTATTCTTAGTATTATCCTTTTTATTATGTAATGATGTCTTTCACTATGTTGCTTTTTCTGCAGAGGGACTATATCCGTAGACTTATATTGTTTCTTTATTTTATGTAGCTGTTGAAGGAATTTTCTGATGACGTGGTTCCTGTAGTAATTTCAGCGAAGAGTGGAGGAACTCAAGCAATTCGTGCCATTTTGACAAGCTCAAAAGAAGACAAGATTCTGCTTGAGGTACCAGTATATTCACTGGATTTCCACATTCTAAGTTCCTGAACTATTTTCTCATAAAAAAAAACAAAAAAAAGATCCCTAAACTATTAATTCTTTAACTACCACTTTGTAGAAGTTTATATACTTCAGTTGATTCTTTCATCATTTTCAACTGGCCTATGCATCTGGATAATTAAGAATATGCATGCCATAATATTATATTTTTTTAAAGAAAATAAAATAAGATGAAGAAGTGGTACATGATGGAAATAAGGTTTGAACTTCCAAAAATTGAGAGCATTAGACTGATGGGTTAACCGAGTAATGCCAAATTTTAAATGGATTTGCTAGAATGTGCCATCCAGCTTTGTAGAACGTGTAAATTATTTTGTGTTCCCGTGCAGAAGGAGCTTCAAAATCTTGAAGACGAAGAAAACAAGAAATTTCGTGGTTTTCGAGAGGTGATAGAGATGATTTCTGCTTCACAGAAGCCTATTGTCTCCTACAGTTCTCTTCATGGTGTTTATCTCATATATTCTTTATTTTTGGTTGATCTCTCTGCTATATTTTCTTTTGTTCTCTAATGCTTTTGTTTTGGATGCAGATTTTACATTTATTCATTCTAAATTCCTTGCTCCCCTGCCTACTAGCATAGATGAGTTTGCTTCTTCCTTGCATTTGGTTTTCCCACGAGTGCTTGAGGTAAAGCATTTGATGAGCAAGATTGGTGGCCTCAGTAAGCCGATGAGTATAGCCGCAGCTCTTTCTTACTTGAAAAAACATTATTATGCACCTACTTACTTGGATATCCCAATTGAAGGTTTGTCACCTCATCGTCCCTTCCTGATGCTATGAAAAACACTTTTTCATTGTGTTTGTGAGAGAGAGACATGACCTAAAACTCACTTTAAATACGTGCTAATGATGCTGATGATGACGTAGATGTGGGTCCATTGGCTTTCCCGGTGCTAAGCTAAGTGATTGAAGGACTCAATCAAGCACCAAAGACATTTAATCTCTGCACTTTGAGGTTTATGTCTATTTAGACTAAGTTTTGAAAAGTGTATAATAGGTTCTTAAGCTTTCAATTTAGTTTGTAATAGATCTTTGAACTTTCAATCTTATGACCAAGAAGTCTTACGAAATTTGAAATTTTAAACAACCAATCGATCTATTAGATAATTTTAATTCTATGTCTAATAGAACCCTAAAATTTCAAAGGTTAATTGAACAAAAATGATATCAAACTATCAAAGGTTAGAAACTAAATCCCTTATCTTGAAAGTCCAGGGAGACGACTGAATTTGCGATTTAGCCTATATTTTTTATGTTTACATTCATTTCTTCACAGTACACATTATAAGCCATTTGTTAGGCCTTGGTTTTTCTCTCTCTTTTTAAATTGTCTTTTGTCTTACCGATCAGTGAAAAGAAGGCCTATCCTTGTTTTATCTTTTTTGTTTTACCGTAATTTAATATACACAATCTTTTCTTAATACATCCATTTTTAATGAATTATTTGTGTTTTTCATGTATCGAGTATCCATCTAAATCTCACTATTTTATTTTTCATTAGGCTCCACTGATCATCACCAAGGTCCCTAAAGTAGAAATCTTTCGTTTCTGCTAACCTTGTAGTTTTCTATTGCAGCTCCAGGAAATGATCACAAGCCTCAGGGGCATAATGCTATACGGTTATGCCATTTGTTTGCCAAAGTCTGCTCTCTACTTAAAATTGATCTCAGTGGTGTCCAATCCAACAACAACGAATGTTTGGCCTCGATGCTCGAAAAGTGTTCAAATGTTTCTTCTTCATTCTCCCCTTACCACCACGAACCCAAGGATGAGGACGTTAAGATCTGGGCACGGGATGTTAGAAAAGCAAGTTGTAGGCATTTGGTTTTCTTGTGGGGATTTAGAGAAGGGATGACTGCTCCGTTGCTAAAAGCTTCACTTGAAGGATCCCATGAAGTTTTCTGTGAAGAGTTTTATGTTCGATTTGTGGACAAGAAATGTGCCATCATCGTTTTCTCACAGCCAGGCCTATCCGAGACCTTCCTTGATGCAATAAATAGTGACTGCATTGTTGGATCTTTAAGAGAGATGGTATCAGAAGGGCTAAGAGCAACAGGTTATGAAACTTACAAGAGAATGTGTAGGTTTGATTTATGGGAAGCAGATTTAGCTGAGTCTTTAGAGAGAGCCATTTTTGAAGCCGACCCCGAAACCGCTCAGTTAGACATCAATTACTCTAATGATACCGTCATTAGTTTGGATGATCTTTGAAAGACATGATTGATTGATATTTGGCATCCATGATAAAACTTTTTAAGTTTTGGTTCATTCCTTACAGCAAGCCTTAAAACTTTATGACGATGGAATATTTTTCTTTCCATTGTTTTGTACATACTGTTGGCCATTTTAGGGCTCTTGCTTGTTGTTTTAAACAGTTTAGATCACCAAATTCATGAATTAGGTGAGAGATGATTTCCATTTGGTAATTCTGCACCTACACTAGTATTTGATAATGGTATCCATTTTAAAAGCTCCTGAATGTTTTCCTCATTTATCTTCTAAAGAAAATG

mRNA sequence

AGGTTTATCATAAGTCCAAATCTCATAACCCAAACCACGATAGTTAAGCAGACTCACTCTTCATAGGAGAGTCTTGGTAAAGCTTGCCATATGAAACAGAGCTCGCAACTCATTTCGCCACTTCCGCCATGAATTTTGAATGAGAGCTTAAACGGGAAAACTATGGCGTCTCGGTTCTCATATTTCCAGCTGCACAGACGCCTCTATACAACAACCACCGATCAATGGAGTATCAAGCAAGTTCGCAATTCCAACTTCCATAGCTGCTTGGGGGACCTGAAGAACCACATCTCCGATTCCGACTTCATCGCACTTTCTCTTCAGAGAACGGGTTCTTCTTCTTTCCCTTGGCACCGCCCTCAGCCCTTCGACACTCTCGATACCGCTTATTGCAAGGCCAAGTACGCCGCCGAGAAGTTTCAGATTCTTCAGTTTTCTCTCTGTCCTTTCTCTGTTAGGGATTCCAAGCTAATCGCCCATCCGTACAACTTTCATTTGTTCCCCAGAGATGAACTGAACATTGGGATGCCATCTTACAGTTTTTCATGTCAAGTTTCACATCTAACATCCATAGCTCGTGAAGGTTTTGACTTTGGTGCTTGGGTATATGATGGCATATCATATTTATCCAGAGCTCAAGAGTCTATAGCAAAAGCTCAAATGGGCTGTCAAACTCTAACACCTAATACTGACGCTGTGAAATCTTCTTCTGAACCGTCAGTTTTTGATACCATTTTTGTTCAACGGGTTAAATCACGTGTAAAGAACTGGAAAGATGCATATGATTCAAGCTCAAAAACAAATGACGCATTGCTAAGTACGTTGAAAAAGCTCATAGTCGGTATTGAGCAGTATGGATCAAGACCATCTATTGTTATAGATGTTTATAGCGAACGGCAAACTCTACTTGCATTAGAGCTGTTGAAGGAATTTTCTGATGACGTGGTTCCTGTAGTAATTTCAGCGAAGAGTGGAGGAACTCAAGCAATTCGTGCCATTTTGACAAGCTCAAAAGAAGACAAGATTCTGCTTGAGAAGGAGCTTCAAAATCTTGAAGACGAAGAAAACAAGAAATTTCGTGGTTTTCGAGAGGTGATAGAGATGATTTCTGCTTCACAGAAGCCTATTGTCTCCTACAGTTCTCTTCATGATTTTACATTTATTCATTCTAAATTCCTTGCTCCCCTGCCTACTAGCATAGATGAGTTTGCTTCTTCCTTGCATTTGGTTTTCCCACGAGTGCTTGAGGTAAAGCATTTGATGAGCAAGATTGGTGGCCTCAGTAAGCCGATGAGTATAGCCGCAGCTCTTTCTTACTTGAAAAAACATTATTATGCACCTACTTACTTGGATATCCCAATTGAAGCTCCAGGAAATGATCACAAGCCTCAGGGGCATAATGCTATACGGTTATGCCATTTGTTTGCCAAAGTCTGCTCTCTACTTAAAATTGATCTCAGTGGTGTCCAATCCAACAACAACGAATGTTTGGCCTCGATGCTCGAAAAGTGTTCAAATGTTTCTTCTTCATTCTCCCCTTACCACCACGAACCCAAGGATGAGGACGTTAAGATCTGGGCACGGGATGTTAGAAAAGCAAGTTGTAGGCATTTGGTTTTCTTGTGGGGATTTAGAGAAGGGATGACTGCTCCGTTGCTAAAAGCTTCACTTGAAGGATCCCATGAAGTTTTCTGTGAAGAGTTTTATGTTCGATTTGTGGACAAGAAATGTGCCATCATCGTTTTCTCACAGCCAGGCCTATCCGAGACCTTCCTTGATGCAATAAATAGTGACTGCATTGTTGGATCTTTAAGAGAGATGGTATCAGAAGGGCTAAGAGCAACAGGTTATGAAACTTACAAGAGAATGTGTAGGTTTGATTTATGGGAAGCAGATTTAGCTGAGTCTTTAGAGAGAGCCATTTTTGAAGCCGACCCCGAAACCGCTCAGTTAGACATCAATTACTCTAATGATACCGTCATTAGTTTGGATGATCTTTGAAAGACATGATTGATTGATATTTGGCATCCATGATAAAACTTTTTAAGTTTTGGTTCATTCCTTACAGCAAGCCTTAAAACTTTATGACGATGGAATATTTTTCTTTCCATTGTTTTGTACATACTGTTGGCCATTTTAGGGCTCTTGCTTGTTGTTTTAAACAGTTTAGATCACCAAATTCATGAATTAGGTGAGAGATGATTTCCATTTGGTAATTCTGCACCTACACTAGTATTTGATAATGGTATCCATTTTAAAAGCTCCTGAATGTTTTCCTCATTTATCTTCTAAAGAAAATG

Coding sequence (CDS)

ATGGCGTCTCGGTTCTCATATTTCCAGCTGCACAGACGCCTCTATACAACAACCACCGATCAATGGAGTATCAAGCAAGTTCGCAATTCCAACTTCCATAGCTGCTTGGGGGACCTGAAGAACCACATCTCCGATTCCGACTTCATCGCACTTTCTCTTCAGAGAACGGGTTCTTCTTCTTTCCCTTGGCACCGCCCTCAGCCCTTCGACACTCTCGATACCGCTTATTGCAAGGCCAAGTACGCCGCCGAGAAGTTTCAGATTCTTCAGTTTTCTCTCTGTCCTTTCTCTGTTAGGGATTCCAAGCTAATCGCCCATCCGTACAACTTTCATTTGTTCCCCAGAGATGAACTGAACATTGGGATGCCATCTTACAGTTTTTCATGTCAAGTTTCACATCTAACATCCATAGCTCGTGAAGGTTTTGACTTTGGTGCTTGGGTATATGATGGCATATCATATTTATCCAGAGCTCAAGAGTCTATAGCAAAAGCTCAAATGGGCTGTCAAACTCTAACACCTAATACTGACGCTGTGAAATCTTCTTCTGAACCGTCAGTTTTTGATACCATTTTTGTTCAACGGGTTAAATCACGTGTAAAGAACTGGAAAGATGCATATGATTCAAGCTCAAAAACAAATGACGCATTGCTAAGTACGTTGAAAAAGCTCATAGTCGGTATTGAGCAGTATGGATCAAGACCATCTATTGTTATAGATGTTTATAGCGAACGGCAAACTCTACTTGCATTAGAGCTGTTGAAGGAATTTTCTGATGACGTGGTTCCTGTAGTAATTTCAGCGAAGAGTGGAGGAACTCAAGCAATTCGTGCCATTTTGACAAGCTCAAAAGAAGACAAGATTCTGCTTGAGAAGGAGCTTCAAAATCTTGAAGACGAAGAAAACAAGAAATTTCGTGGTTTTCGAGAGGTGATAGAGATGATTTCTGCTTCACAGAAGCCTATTGTCTCCTACAGTTCTCTTCATGATTTTACATTTATTCATTCTAAATTCCTTGCTCCCCTGCCTACTAGCATAGATGAGTTTGCTTCTTCCTTGCATTTGGTTTTCCCACGAGTGCTTGAGGTAAAGCATTTGATGAGCAAGATTGGTGGCCTCAGTAAGCCGATGAGTATAGCCGCAGCTCTTTCTTACTTGAAAAAACATTATTATGCACCTACTTACTTGGATATCCCAATTGAAGCTCCAGGAAATGATCACAAGCCTCAGGGGCATAATGCTATACGGTTATGCCATTTGTTTGCCAAAGTCTGCTCTCTACTTAAAATTGATCTCAGTGGTGTCCAATCCAACAACAACGAATGTTTGGCCTCGATGCTCGAAAAGTGTTCAAATGTTTCTTCTTCATTCTCCCCTTACCACCACGAACCCAAGGATGAGGACGTTAAGATCTGGGCACGGGATGTTAGAAAAGCAAGTTGTAGGCATTTGGTTTTCTTGTGGGGATTTAGAGAAGGGATGACTGCTCCGTTGCTAAAAGCTTCACTTGAAGGATCCCATGAAGTTTTCTGTGAAGAGTTTTATGTTCGATTTGTGGACAAGAAATGTGCCATCATCGTTTTCTCACAGCCAGGCCTATCCGAGACCTTCCTTGATGCAATAAATAGTGACTGCATTGTTGGATCTTTAAGAGAGATGGTATCAGAAGGGCTAAGAGCAACAGGTTATGAAACTTACAAGAGAATGTGTAGGTTTGATTTATGGGAAGCAGATTTAGCTGAGTCTTTAGAGAGAGCCATTTTTGAAGCCGACCCCGAAACCGCTCAGTTAGACATCAATTACTCTAATGATACCGTCATTAGTTTGGATGATCTTTGA

Protein sequence

MASRFSYFQLHRRLYTTTTDQWSIKQVRNSNFHSCLGDLKNHISDSDFIALSLQRTGSSSFPWHRPQPFDTLDTAYCKAKYAAEKFQILQFSLCPFSVRDSKLIAHPYNFHLFPRDELNIGMPSYSFSCQVSHLTSIAREGFDFGAWVYDGISYLSRAQESIAKAQMGCQTLTPNTDAVKSSSEPSVFDTIFVQRVKSRVKNWKDAYDSSSKTNDALLSTLKKLIVGIEQYGSRPSIVIDVYSERQTLLALELLKEFSDDVVPVVISAKSGGTQAIRAILTSSKEDKILLEKELQNLEDEENKKFRGFREVIEMISASQKPIVSYSSLHDFTFIHSKFLAPLPTSIDEFASSLHLVFPRVLEVKHLMSKIGGLSKPMSIAAALSYLKKHYYAPTYLDIPIEAPGNDHKPQGHNAIRLCHLFAKVCSLLKIDLSGVQSNNNECLASMLEKCSNVSSSFSPYHHEPKDEDVKIWARDVRKASCRHLVFLWGFREGMTAPLLKASLEGSHEVFCEEFYVRFVDKKCAIIVFSQPGLSETFLDAINSDCIVGSLREMVSEGLRATGYETYKRMCRFDLWEADLAESLERAIFEADPETAQLDINYSNDTVISLDDL

Homology

[Close]

BLAST of Cmc01g0026341 vs. NCBI nr
Match: KAA0059619.1 (poly(A)-specific ribonuclease PARN-like [Cucumis melo var. makuwa])

HSP 1 Score: 1225.7 bits (3170), Expect = 0.0e+00
Identity = 610/612 (99.67%), Postives = 610/612 (99.67%), Query Frame = 0


Query: 1   MASRFSYFQLHRRLYTTTTDQWSIKQVRNSNFHSCLGDLKNHISDSDFIALSLQRTGSSS 60
           MASRFSYFQLHRRLYTTTTDQWSIKQVRNSNFH CLGDLKNHISDSDFIALSLQRTGSSS
Sbjct: 1   MASRFSYFQLHRRLYTTTTDQWSIKQVRNSNFHGCLGDLKNHISDSDFIALSLQRTGSSS 60

Query: 61  FPWHRPQPFDTLDTAYCKAKYAAEKFQILQFSLCPFSVRDSKLIAHPYNFHLFPRDELNI 120
           FPWHRPQPFDTLDTAYCKAKYAAEKFQILQFSLCPFSVRDSKLIAHPYNFHLFPRDELNI
Sbjct: 61  FPWHRPQPFDTLDTAYCKAKYAAEKFQILQFSLCPFSVRDSKLIAHPYNFHLFPRDELNI 120

Query: 121 GMPSYSFSCQVSHLTSIAREGFDFGAWVYDGISYLSRAQESIAKAQMGCQTLTPNTDAVK 180
           GMPSYSFSCQVSHLTSIAREGFDFGAWVYDGISYLSRAQESIAKAQMGCQTLTPNTDAVK
Sbjct: 121 GMPSYSFSCQVSHLTSIAREGFDFGAWVYDGISYLSRAQESIAKAQMGCQTLTPNTDAVK 180

Query: 181 SSSEPSVFDTIFVQRVKSRVKNWKDAYDSSSKTNDALLSTLKKLIVGIEQYGSRPSIVID 240
           SSSEPSVFDTIFVQRVKSRVKNWKDAYDSSSKTNDALLSTLKKLIVGIEQYGSRPSIVID
Sbjct: 181 SSSEPSVFDTIFVQRVKSRVKNWKDAYDSSSKTNDALLSTLKKLIVGIEQYGSRPSIVID 240

Query: 241 VYSERQTLLALELLKEFSDDVVPVVISAKSGGTQAIRAILTSSKEDKILLEKELQNLEDE 300
           VYSERQ LLALELLKEFSDDVVPVVISAKSGGTQAIRAILTSSKEDKILLEKELQNLEDE
Sbjct: 241 VYSERQALLALELLKEFSDDVVPVVISAKSGGTQAIRAILTSSKEDKILLEKELQNLEDE 300

Query: 301 ENKKFRGFREVIEMISASQKPIVSYSSLHDFTFIHSKFLAPLPTSIDEFASSLHLVFPRV 360
           ENKKFRGFREVIEMISASQKPIVSYSSLHDFTFIHSKFLAPLPTSIDEFASSLHLVFPRV
Sbjct: 301 ENKKFRGFREVIEMISASQKPIVSYSSLHDFTFIHSKFLAPLPTSIDEFASSLHLVFPRV 360

Query: 361 LEVKHLMSKIGGLSKPMSIAAALSYLKKHYYAPTYLDIPIEAPGNDHKPQGHNAIRLCHL 420
           LEVKHLMSKIGGLSKPMSIAAALSYLKKHYYAPTYLDIPIEAPGNDHKPQGHNAIRLCHL
Sbjct: 361 LEVKHLMSKIGGLSKPMSIAAALSYLKKHYYAPTYLDIPIEAPGNDHKPQGHNAIRLCHL 420

Query: 421 FAKVCSLLKIDLSGVQSNNNECLASMLEKCSNVSSSFSPYHHEPKDEDVKIWARDVRKAS 480
           FAKVCSLLKIDLSGVQSNNNECLASMLEKCSNVSSSFSPYHHEPKDEDVKIWARDVRKAS
Sbjct: 421 FAKVCSLLKIDLSGVQSNNNECLASMLEKCSNVSSSFSPYHHEPKDEDVKIWARDVRKAS 480

Query: 481 CRHLVFLWGFREGMTAPLLKASLEGSHEVFCEEFYVRFVDKKCAIIVFSQPGLSETFLDA 540
           CRHLVFLWGFREGMTAPLLKASLEGSHEVFCEEFYVRFVDKKCAIIVFSQPGLSETFLDA
Sbjct: 481 CRHLVFLWGFREGMTAPLLKASLEGSHEVFCEEFYVRFVDKKCAIIVFSQPGLSETFLDA 540

Query: 541 INSDCIVGSLREMVSEGLRATGYETYKRMCRFDLWEADLAESLERAIFEADPETAQLDIN 600
           INSDCIVGSLREMVSEGLRATGYETYKRMCRFDLWEADLAESLERAIFEADPETAQLDIN
Sbjct: 541 INSDCIVGSLREMVSEGLRATGYETYKRMCRFDLWEADLAESLERAIFEADPETAQLDIN 600

Query: 601 YSNDTVISLDDL 613
           YSNDTVISLDDL
Sbjct: 601 YSNDTVISLDDL 612

[Close]

BLAST of Cmc01g0026341 vs. NCBI nr
Match: TYK08152.1 (poly(A)-specific ribonuclease PARN-like [Cucumis melo var. makuwa])

HSP 1 Score: 1202.6 bits (3110), Expect = 0.0e+00
Identity = 605/629 (96.18%), Postives = 607/629 (96.50%), Query Frame = 0


Query: 1   MASRFSYFQLHRRLYTTTTDQWSIKQVRNSNFHSCLGDLKNHISDSDFIALSLQRTGSSS 60
           MASRFSYFQLHRRLYTTTTDQWSIKQVRNSNFH CLGDLKNHISDSDFIALSLQRTGSSS
Sbjct: 1   MASRFSYFQLHRRLYTTTTDQWSIKQVRNSNFHGCLGDLKNHISDSDFIALSLQRTGSSS 60

Query: 61  FPWHRPQPFDTLDTAYCKAKYAAEKFQILQFSLCPFSVRDSKLIAHPYNFHLFPRDELNI 120
           FPWHRPQPFDTLDTAYCKAKYAAEKFQILQFSLCPFSVRDSKLIAHPYNFHLFPRDELNI
Sbjct: 61  FPWHRPQPFDTLDTAYCKAKYAAEKFQILQFSLCPFSVRDSKLIAHPYNFHLFPRDELNI 120

Query: 121 GMPSYSFSCQVSHLTSIAREGFDFGAWVYD----GISYL-------------SRAQESIA 180
           GMPSYSFSCQVSHLTSIAREGFDFGAWVYD    G+ +L               AQESIA
Sbjct: 121 GMPSYSFSCQVSHLTSIAREGFDFGAWVYDDSTMGLQWLDILQEFFFCPLRAKTAQESIA 180

Query: 181 KAQMGCQTLTPNTDAVKSSSEPSVFDTIFVQRVKSRVKNWKDAYDSSSKTNDALLSTLKK 240
           KAQMGCQTLTPNTDAVKSSSEPSVFDTIFVQRVKSRVKNWKDAYDSSSKTNDALLSTLKK
Sbjct: 181 KAQMGCQTLTPNTDAVKSSSEPSVFDTIFVQRVKSRVKNWKDAYDSSSKTNDALLSTLKK 240

Query: 241 LIVGIEQYGSRPSIVIDVYSERQTLLALELLKEFSDDVVPVVISAKSGGTQAIRAILTSS 300
           LIVGIEQYGSRPSIVIDVYSERQ LLALELLKEFSDDVVPVVISAKSGGTQAIRAILTSS
Sbjct: 241 LIVGIEQYGSRPSIVIDVYSERQALLALELLKEFSDDVVPVVISAKSGGTQAIRAILTSS 300

Query: 301 KEDKILLEKELQNLEDEENKKFRGFREVIEMISASQKPIVSYSSLHDFTFIHSKFLAPLP 360
           KEDKILLEKELQNLEDEENKKFRGFREVIEMISASQKPIVSYSSLHDFTFIHSKFLAPLP
Sbjct: 301 KEDKILLEKELQNLEDEENKKFRGFREVIEMISASQKPIVSYSSLHDFTFIHSKFLAPLP 360

Query: 361 TSIDEFASSLHLVFPRVLEVKHLMSKIGGLSKPMSIAAALSYLKKHYYAPTYLDIPIEAP 420
           TSIDEFASSLHLVFPRVLEVKHLMSKIGGLSKPMSIAAALSYLKKHYYAPTYLDIPIEAP
Sbjct: 361 TSIDEFASSLHLVFPRVLEVKHLMSKIGGLSKPMSIAAALSYLKKHYYAPTYLDIPIEAP 420

Query: 421 GNDHKPQGHNAIRLCHLFAKVCSLLKIDLSGVQSNNNECLASMLEKCSNVSSSFSPYHHE 480
           GNDHKPQGHNAIRLCHLFAKVCSLLKIDLSGVQSNNNECLASMLEKCSNVSSSFSPYHHE
Sbjct: 421 GNDHKPQGHNAIRLCHLFAKVCSLLKIDLSGVQSNNNECLASMLEKCSNVSSSFSPYHHE 480

Query: 481 PKDEDVKIWARDVRKASCRHLVFLWGFREGMTAPLLKASLEGSHEVFCEEFYVRFVDKKC 540
           PKDEDVKIWARDVRKASCRHLVFLWGFREGMTAPLLKASLEGSHEVFCEEFYVRFVDKKC
Sbjct: 481 PKDEDVKIWARDVRKASCRHLVFLWGFREGMTAPLLKASLEGSHEVFCEEFYVRFVDKKC 540

Query: 541 AIIVFSQPGLSETFLDAINSDCIVGSLREMVSEGLRATGYETYKRMCRFDLWEADLAESL 600
           AIIVFSQPGLSETFLDAINSDCIVGSLREMVSEGLRATGYETYKRMCRFDLWEADLAESL
Sbjct: 541 AIIVFSQPGLSETFLDAINSDCIVGSLREMVSEGLRATGYETYKRMCRFDLWEADLAESL 600

Query: 601 ERAIFEADPETAQLDINYSNDTVISLDDL 613
           ERAIFEADPETAQLDINYSNDTVISLDDL
Sbjct: 601 ERAIFEADPETAQLDINYSNDTVISLDDL 629

[Close]

BLAST of Cmc01g0026341 vs. NCBI nr
Match: XP_008451634.1 (PREDICTED: poly(A)-specific ribonuclease PARN-like [Cucumis melo])

HSP 1 Score: 1147.9 bits (2968), Expect = 0.0e+00
Identity = 576/612 (94.12%), Postives = 584/612 (95.42%), Query Frame = 0


Query: 1   MASRFSYFQLHRRLYTTTTDQWSIKQVRNSNFHSCLGDLKNHISDSDFIALSLQRTGSSS 60
           MASRFSYFQLHRRLYTTTTDQWSIKQVRNSNFHSCLGDLKNHISDSDFIALSLQRTGSSS
Sbjct: 1   MASRFSYFQLHRRLYTTTTDQWSIKQVRNSNFHSCLGDLKNHISDSDFIALSLQRTGSSS 60

Query: 61  FPWHRPQPFDTLDTAYCKAKYAAEKFQILQFSLCPFSVRDSKLIAHPYNFHLFPRDELNI 120
           FPWHRPQPFDTLDTAYCKAKYAAEKFQILQFSLCPFSVRDSKLIAHPYNFHLFPRDELNI
Sbjct: 61  FPWHRPQPFDTLDTAYCKAKYAAEKFQILQFSLCPFSVRDSKLIAHPYNFHLFPRDELNI 120

Query: 121 GMPSYSFSCQVSHLTSIAREGFDFGAWVYDGISYLSRAQESIAKAQMGCQTLTPNTDAVK 180
           GMPSYSFSCQVSHLTSIAREGFDFGAWVYDGISYLSRAQESIAKAQMGCQTLTPNTDAVK
Sbjct: 121 GMPSYSFSCQVSHLTSIAREGFDFGAWVYDGISYLSRAQESIAKAQMGCQTLTPNTDAVK 180

Query: 181 SSSEPSVFDTIFVQRVKSRVKNWKDAYDSSSKTNDALLSTLKKLIVGIEQYGSRPSIVID 240
           SSSEPSVFDTIFVQRVKSRVKNWKDAYDSSSKTNDALLSTLKKLIVGIEQYGSRPSIVID
Sbjct: 181 SSSEPSVFDTIFVQRVKSRVKNWKDAYDSSSKTNDALLSTLKKLIVGIEQYGSRPSIVID 240

Query: 241 VYSERQTLLALELLKEFSDDVVPVVISAKSGGTQAIRAILTSSKEDKILLEKELQNLEDE 300
           VYSERQTLLALE+      D++   I            +  + K   + ++KELQNLEDE
Sbjct: 241 VYSERQTLLALEM------DLLECAIQ-----------LCRTCKLFCVPVQKELQNLEDE 300

Query: 301 ENKKFRGFREVIEMISASQKPIVSYSSLHDFTFIHSKFLAPLPTSIDEFASSLHLVFPRV 360
           ENKKFRGFREVIEMISASQKPIVSYSSLHDFTFIHSKFLAPLPTSIDEFASSLHLVFPRV
Sbjct: 301 ENKKFRGFREVIEMISASQKPIVSYSSLHDFTFIHSKFLAPLPTSIDEFASSLHLVFPRV 360

Query: 361 LEVKHLMSKIGGLSKPMSIAAALSYLKKHYYAPTYLDIPIEAPGNDHKPQGHNAIRLCHL 420
           LEVKHLMSKIGGLSKPMSIAAALSYLKKHYYAPTYLDIPIEAPGNDHKPQGHNAIRLCHL
Sbjct: 361 LEVKHLMSKIGGLSKPMSIAAALSYLKKHYYAPTYLDIPIEAPGNDHKPQGHNAIRLCHL 420

Query: 421 FAKVCSLLKIDLSGVQSNNNECLASMLEKCSNVSSSFSPYHHEPKDEDVKIWARDVRKAS 480
           FAKVCSLLKIDLSGVQSNNNECLASMLEKCSNVSSSFSPYHHEPKDEDVKIWARDVRKAS
Sbjct: 421 FAKVCSLLKIDLSGVQSNNNECLASMLEKCSNVSSSFSPYHHEPKDEDVKIWARDVRKAS 480

Query: 481 CRHLVFLWGFREGMTAPLLKASLEGSHEVFCEEFYVRFVDKKCAIIVFSQPGLSETFLDA 540
           CRHLVFLWGFREGMTAPLLKASLEGSHEVFCEEFYVRFVDKKCAIIVFSQPGLSETFLDA
Sbjct: 481 CRHLVFLWGFREGMTAPLLKASLEGSHEVFCEEFYVRFVDKKCAIIVFSQPGLSETFLDA 540

Query: 541 INSDCIVGSLREMVSEGLRATGYETYKRMCRFDLWEADLAESLERAIFEADPETAQLDIN 600
           INSDCIVGSLREMVSEGLRATGYETYKRMCRFDLWEADLAESLERAIFEADPETAQLDIN
Sbjct: 541 INSDCIVGSLREMVSEGLRATGYETYKRMCRFDLWEADLAESLERAIFEADPETAQLDIN 595

Query: 601 YSNDTVISLDDL 613
           YSNDTVISLDDL
Sbjct: 601 YSNDTVISLDDL 595

[Close]

BLAST of Cmc01g0026341 vs. NCBI nr
Match: XP_004148964.1 (poly(A)-specific ribonuclease PARN-like [Cucumis sativus] >KAE8646280.1 hypothetical protein Csa_016030 [Cucumis sativus])

HSP 1 Score: 1076.6 bits (2783), Expect = 0.0e+00
Identity = 542/612 (88.56%), Postives = 573/612 (93.63%), Query Frame = 0


Query: 1   MASRFSYFQLHRRLYTTTTDQWSIKQVRNSNFHSCLGDLKNHISDSDFIALSLQRTGSSS 60
           MASRFSYFQLHRRLYTTT+ QWS++QVRNSNF   L DLKN ISDSDFIALSLQRTGSSS
Sbjct: 1   MASRFSYFQLHRRLYTTTS-QWSVRQVRNSNFLGSLEDLKNDISDSDFIALSLQRTGSSS 60

Query: 61  FPWHRPQPFDTLDTAYCKAKYAAEKFQILQFSLCPFSVRDSKLIAHPYNFHLFPRDELNI 120
           FPWHR QPFDT DTAYCKAKYAAEKFQI+QFSLCPFSVRDSKLIAHPYNFHLFPRDELNI
Sbjct: 61  FPWHRLQPFDTHDTAYCKAKYAAEKFQIIQFSLCPFSVRDSKLIAHPYNFHLFPRDELNI 120

Query: 121 GMPSYSFSCQVSHLTSIAREGFDFGAWVYDGISYLSRAQESIAKAQMGCQTLTPNTDAVK 180
           GMPSYSFSCQVSHLTS+AREGFDFGAWVYDGISYLSRAQESIAK QMG QTL PN +AVK
Sbjct: 121 GMPSYSFSCQVSHLTSMAREGFDFGAWVYDGISYLSRAQESIAKTQMGSQTLPPNINAVK 180

Query: 181 SSSEPSVFDTIFVQRVKSRVKNWKDAYDSSSKTNDALLSTLKKLIVGIEQYGSRPSIVID 240
            SSE SV DTIFVQRVKSRVKNWKDAYDSSSKT+DALLSTLKKLIVG EQYGSRPSIVID
Sbjct: 181 PSSELSVADTIFVQRVKSRVKNWKDAYDSSSKTSDALLSTLKKLIVGSEQYGSRPSIVID 240

Query: 241 VYSERQTLLALELLKEFSDDVVPVVISAKSGGTQAIRAILTSSKEDKILLEKELQNLEDE 300
           VYSERQ LL LELLKEFSDD+VPVVISAK GGTQA+RAILTSSKEDKILLEKELQ LED+
Sbjct: 241 VYSERQVLLVLELLKEFSDDLVPVVISAKGGGTQAVRAILTSSKEDKILLEKELQYLEDK 300

Query: 301 ENKKFRGFREVIEMISASQKPIVSYSSLHDFTFIHSKFLAPLPTSIDEFASSLHLVFPRV 360
           ENKKFRGFREVI++ISASQKPIVSY+SLHDFTFIHSKFLAPLPTSIDE+ASSLH VFPRV
Sbjct: 301 ENKKFRGFREVIDVISASQKPIVSYNSLHDFTFIHSKFLAPLPTSIDEYASSLHSVFPRV 360

Query: 361 LEVKHLMSKIGGLSKPMSIAAALSYLKKHYYAPTYLDIPIEAPGNDHKPQGHNAIRLCHL 420
            +VKHLMSKIGGLSKPMSIAAA SYLKK YYAP+YLDIP+EAPGNDHKP GHNAIRLCHL
Sbjct: 361 HDVKHLMSKIGGLSKPMSIAAAYSYLKKQYYAPSYLDIPVEAPGNDHKPHGHNAIRLCHL 420

Query: 421 FAKVCSLLKIDLSGVQSNNNECLASMLEKCSNVSSSFSPYHHEPKDEDVKIWARDVRKAS 480
           FA+VCS+LKIDLSGVQSN+NECLASML++CSNV SSFSPYH +PKDEDVKIWA+ VRK S
Sbjct: 421 FAQVCSVLKIDLSGVQSNDNECLASMLDECSNV-SSFSPYHCKPKDEDVKIWAQGVRKVS 480

Query: 481 CRHLVFLWGFREGMTAPLLKASLEGSHEVFCEEFYVRFVDKKCAIIVFSQPGLSETFLDA 540
           CRHLVFLWG REG+TA LLKASLEG+HEVFCEEF VRFVDKKCAI+VFSQP LSETFLDA
Sbjct: 481 CRHLVFLWGLREGLTARLLKASLEGTHEVFCEEFDVRFVDKKCAIVVFSQPDLSETFLDA 540

Query: 541 INSDCIVGSLREMVSEGLRATGYETYKRMCRFDLWEADLAESLERAIFEADPETAQLDIN 600
           INSD IVGSLREMVSEGLRA GYETYK++C FDLWEADLAESLERAI EADPETAQLDIN
Sbjct: 541 INSDNIVGSLREMVSEGLRAAGYETYKKICSFDLWEADLAESLERAILEADPETAQLDIN 600

Query: 601 YSNDTVISLDDL 613
           YSND+ I L+DL
Sbjct: 601 YSNDSFIYLNDL 610

[Close]

BLAST of Cmc01g0026341 vs. NCBI nr
Match: XP_038899639.1 (poly(A)-specific ribonuclease PARN-like isoform X2 [Benincasa hispida])

HSP 1 Score: 1013.4 bits (2619), Expect = 8.0e-292
Identity = 507/619 (81.91%), Postives = 557/619 (89.98%), Query Frame = 0


Query: 1   MASRFSYFQLHRRLYTTTTDQWSIKQVRNSNFHSCLGDLKNHISDSDFIALSLQRTGSSS 60
           MASRFS  QL RRLYTTT+ QWS++QVR+S+FH CLG+LKNHISDSDFIALSLQ TGSSS
Sbjct: 1   MASRFSSVQLQRRLYTTTS-QWSVRQVRSSDFHGCLGELKNHISDSDFIALSLQNTGSSS 60

Query: 61  FPWHRPQPFDTLDTAYCKAKYAAEKFQILQFSLCPFSVRDSKLIAHPYNFHLFPRDELNI 120
           FPWHR QPFDT DTAYCK KYAAEKFQILQF+LCPFSVR+SKLIAHPYNFHLFPRDELNI
Sbjct: 61  FPWHRLQPFDTYDTAYCKTKYAAEKFQILQFALCPFSVRESKLIAHPYNFHLFPRDELNI 120

Query: 121 GMPSYSFSCQVSHLTSIAREGFDFGAWVYDGISYLSRAQESIAKAQMGCQTLTPNTDAVK 180
           GMPSYSFSCQVSHLTS+AREGFDF A +YDGISYLSRAQE IAK +MGC TLT NT+  K
Sbjct: 121 GMPSYSFSCQVSHLTSMAREGFDFDACIYDGISYLSRAQEFIAKVRMGCPTLTSNTNVAK 180

Query: 181 SSSEPSVFDTIFVQRVKSRVKNWKDAYDSSSKTNDALLSTLKKLIVGIEQYGSRPSIVID 240
           SSS+PSV D+IFVQRVKSRVKNWKDA +SSSK +D LLS L+KLI G EQYGSRPS+ ID
Sbjct: 181 SSSKPSVADSIFVQRVKSRVKNWKDACNSSSKKSDGLLSLLEKLIPGREQYGSRPSMTID 240

Query: 241 VYSERQTLLALELLKEFSDDVVPVVISAKSGGTQAIRAILTSSKEDKILLEKELQNLEDE 300
           V SERQ +L LELL EFSDD+VPVVI AKSGGT+AIRAILTSSKEDKILLEKELQNLE+E
Sbjct: 241 VCSERQVILVLELLMEFSDDLVPVVIPAKSGGTRAIRAILTSSKEDKILLEKELQNLEEE 300

Query: 301 ENKKFRGFREVIEMISASQKPIVSYSSLHDFTFIHSKFLAPLPTSIDEFASSLHLVFPRV 360
           ENKK RGFREVIEMISASQKPI+SYSSL+DFTFIHSKFLAPLPT+IDEFASSLHLVFPRV
Sbjct: 301 ENKKIRGFREVIEMISASQKPIISYSSLNDFTFIHSKFLAPLPTNIDEFASSLHLVFPRV 360

Query: 361 LEVKHLMSKIGGLSKPMSIAAALSYLKKHYYAPTYLDIPIEAPGNDHKPQGHNAIRLCHL 420
           L+VKHLMSKIGGL+KP SI +ALSYLK HYYAP  LDIP+EA GNDHK  GHNAI LCHL
Sbjct: 361 LDVKHLMSKIGGLNKPTSITSALSYLKNHYYAPVDLDIPVEATGNDHKFHGHNAIWLCHL 420

Query: 421 FAKVCSLLKIDLSGVQSNNNECLASMLEKCSNVSSSFSPYHHEPKDEDVKIWARDVRKAS 480
           FAKVCS+LKIDL GVQSNNN+ LASML++C+NVSSSFSPYHH+P+DE++KIWA++  K S
Sbjct: 421 FAKVCSVLKIDLDGVQSNNNKRLASMLDECANVSSSFSPYHHKPEDENIKIWAKNAIKVS 480

Query: 481 CRHLVFLWGFREGMTAPLLKASLEGSHEVFCEEFYVRFVDKKCAIIVFSQPGLSETFLDA 540
           CRHL+FLWGFR+GMTA LLK +LEGSHEVFCEEF VRFVDKKCAI+VF QPGLSETFLDA
Sbjct: 481 CRHLIFLWGFRDGMTARLLKTALEGSHEVFCEEFDVRFVDKKCAIVVFWQPGLSETFLDA 540

Query: 541 INSDCIVGSLREMVSEGLRATGYETYKRMCRFDLWEADLAESLERA-------IFEADPE 600
           INSD IVGSLREMVSEGLRA GYETYKR+CR DLWEADLAESLERA       I EA+PE
Sbjct: 541 INSDGIVGSLREMVSEGLRAAGYETYKRVCRLDLWEADLAESLERAMLEEHHSILEAEPE 600

Query: 601 TAQLDINYSNDTVISLDDL 613
           T +LDINYSND++I L+DL
Sbjct: 601 TVRLDINYSNDSLIYLNDL 618

[Close]

BLAST of Cmc01g0026341 vs. ExPASy Swiss-Prot
Match: Q8W4C3 (Poly(A)-specific ribonuclease PARN-like OS=Arabidopsis thaliana OX=3702 GN=At3g25430 PE=2 SV=1)

HSP 1 Score: 591.7 bits (1524), Expect = 9.8e-168
Identity = 312/610 (51.15%), Postives = 429/610 (70.33%), Query Frame = 0


Query: 16  TTTTDQWSIKQVRNSNFHSCLGDLKNHISDSDFIALSLQRTGSSSFPWHRPQPFDTLDTA 75
           T    +WS+KQV+ SNFH  L +++  I  SDFIALSLQ TGS +  WHR    DT  T+
Sbjct: 18  TLNQGRWSVKQVKKSNFHVTLDEIRTSIDSSDFIALSLQNTGSYAAAWHRVSAIDTPQTS 77

Query: 76  YCKAKYAAEKFQILQFSLCPFSVRDSKLIAHPYNFHLFPRDELNIGMPSYSFSCQVSHLT 135
           Y KAKYAAE++QILQF+LCPFS++ SKL  HPYNFHLFPRDEL  GMPSYSFSCQ S LT
Sbjct: 78  YLKAKYAAERYQILQFALCPFSLQGSKLTVHPYNFHLFPRDELKCGMPSYSFSCQASRLT 137

Query: 136 SIAREGFDFGAWVYDGISYLSRAQESIAKAQMGCQTLTPNTDAVKSSSEP-SVFDTIFVQ 195
           ++AREGFDF   +Y+GISYLSRAQES +K       L    D+V  SS P +V DT+FV 
Sbjct: 138 AMAREGFDFNICIYEGISYLSRAQESASKFLSENPIL---ADSVTVSSSPATVADTVFVG 197

Query: 196 RVKSRVKNWKDA-YDSSSKT-NDALLSTLKKLIVGIEQYGSRPSIVIDVYSERQTLLALE 255
           R++SRVKNW+ +  DS SKT +D L+S+L++L++G EQYGSR  + IDV SERQ  L LE
Sbjct: 198 RIRSRVKNWRQSCIDSGSKTGDDDLVSSLRRLVLGSEQYGSRLCLTIDVCSERQVQLILE 257

Query: 256 LLKEFSDDVVPVVISAKSGGTQAIRAILTSSKEDKILLEKELQNLEDEENKKFRGFREVI 315
           +L EFSDDVVP+++++KS GTQA+R +  SSKEDK L ++EL++LE EEN++ RGFREV+
Sbjct: 258 MLTEFSDDVVPLLVASKSRGTQAVRTVFMSSKEDKDLFKRELKDLEKEENRRVRGFREVV 317

Query: 316 EMISASQKPIVSYSSLHDFTFIHSKFLAPLPTSIDEFASSLHLVFPRVLEVKHLMSKIGG 375
           + IS+SQKP+VS + L DFT IH+KFL PLP+++D+F+SSL   FP V+++   M +I  
Sbjct: 318 DFISSSQKPVVSQNYLSDFTSIHAKFLGPLPSNVDDFSSSLSSAFPNVVDLSQFMKEISP 377

Query: 376 LSKPMSIAAALSYLKKHYYAPTYLDI-----PIEAPGNDHKPQGHNAIRLCHLFAKVCSL 435
           LS   ++ AA+S L + ++AP  +++     P++     H+  G NA+ +  LFAK+C++
Sbjct: 378 LSNISNLPAAMSSLNR-FFAPVDVEVANQGCPVKL-DEGHQSHGQNAVMISQLFAKLCTI 437

Query: 436 LKIDLSGVQSNNNECLASMLEKCSNVSSSFSPYHHEPKDEDVKIWARDVRKASCRHLVFL 495
            K DLS +QSN +    +  E  ++V+S          DE+VK+W+++ R+ S  +LVF+
Sbjct: 438 QKSDLSTIQSNEDFQALASDEHANSVTSC----SKNAGDENVKVWSKNSRRVSSENLVFI 497

Query: 496 WGFREGMTAPLLKASLEGSHEVFCEEFYVRFVDKKCAIIVFSQPGLSETFLDAINS-DCI 555
           WG  + MTA  LK  L+ SH VF  EF V+++D+  AI+VF + G SETFL A+N+ + +
Sbjct: 498 WGLGKKMTAAKLKNVLQKSHPVFAREFDVKYIDRSSAILVFWESGPSETFLSAVNNEEQL 557

Query: 556 VGSLREMVSEGLRATGYETYKRMCRFDLWEADLAESLERAI----FEADPETAQLDINYS 613
            GSLREMV+EGLR  GYETYKR CR   WEADLAESL++A+     + D +T   +I++S
Sbjct: 558 DGSLREMVAEGLRGAGYETYKRACRLGFWEADLAESLDKALESSDTDPDSDTKPSEIDWS 617

[Close]

BLAST of Cmc01g0026341 vs. ExPASy Swiss-Prot
Match: Q9LG26 (Poly(A)-specific ribonuclease PARN OS=Arabidopsis thaliana OX=3702 GN=PARN PE=1 SV=2)

HSP 1 Score: 197.2 bits (500), Expect = 5.4e-49
Identity = 160/623 (25.68%), Postives = 285/623 (45.75%), Query Frame = 0


Query: 17  TTTDQWSIKQVRNSNFHSCLGDLKNHISDSDFIALSLQRTGSSSFPWHRPQPFDTLDTAY 76
           + T  + +K V  SNF + L DL++ +  +DF+A+ L+ TG +S PW     FD  D  Y
Sbjct: 31  SATAAFPLKHVTRSNFETTLNDLRSLVKAADFVAIDLEMTGVTSAPWRDSLEFDRYDVRY 90

Query: 77  CKAKYAAEKFQILQFSLCPF--SVRDSKLIAHPYNFHLFPRDELNIGMPSYSFSCQVSHL 136
            K K +AEKF ++QF +CPF    R    +++P+NF +FPR EL    P++ F CQ + +
Sbjct: 91  LKVKDSAEKFAVVQFGVCPFRWDSRTQSFVSYPHNFFVFPRQELTFDPPAHEFLCQTTSM 150

Query: 137 TSIAREGFDFGAWVYDGISYLSRAQESIAKAQMGCQTLTPNTDAVKSSSEPS------VF 196
             +A+  FDF   +++GISYLSR +E  A  ++    +    D + SS E        + 
Sbjct: 151 DFLAKYQFDFNTCIHEGISYLSRREEEEASKRL---KMLHGEDGIDSSGETEELKLVRLA 210

Query: 197 DTIFVQRVKSRVKNWKDA--YDSSSKTNDALLSTLKKLIVGIEQYGSRPSIVIDVYSERQ 256
           D +F  R++  +  W+    +  ++ +    +S      +    +  RP++ +  ++  Q
Sbjct: 211 DVLFAARMEKLLNEWRSGLLHGGNASSEFPRISNGSNQSMETVFHHMRPALSLKGFTSHQ 270

Query: 257 TLLALELLKEFSDDVVPVVISAKSGGTQAIRAILTSSKEDKILLEKELQN----LEDEEN 316
             +   +L++   D+V +  + KS  ++ I  + T S  DK  L KE ++    L + + 
Sbjct: 271 LRVLNSVLRKHFGDLVYIHSNDKSSSSRDI-VVYTDSDSDKENLMKEAKDERKRLAERKI 330

Query: 317 KKFRGFREVIEMISASQKPIVSYSSLHDFTFIHSKFLAPLPTSIDEFASSLHLVFPRVLE 376
           +   GFR+VI+++++ +K IV ++   D   ++SKF+ PLP++ ++F +S++  FP +++
Sbjct: 331 QSAIGFRQVIDLLASEKKLIVGHNCFLDIAHVYSKFVGPLPSTAEKFVASINSHFPYIVD 390

Query: 377 VKHLMSKIGGLSKPM-----SIAAALSYL---------KKHYYAPTYLDIPIEA------ 436
            K L++    L + M     S+++A S L             +    ++I +E       
Sbjct: 391 TKILLNVNPMLHQRMKKSSTSLSSAFSSLCPQIEFSSRSSDSFLQQRVNIDVEIDNVRCS 450

Query: 437 ---PGNDHKPQGHNAIRLCHLFAKVCSLLKIDLSGVQSNNNECLASMLEKCSN-VSSSFS 496
               G  H+  G++A     +FA+ C+ L  D       ++      LEK  N +  S++
Sbjct: 451 NWNAGGKHE-AGYDAFMTGCIFAQACNHLGFDFKQHSQLDDFAQNEKLEKYINRLYLSWT 510

Query: 497 P---YHHEPKDEDVKIWARDVRKASCRHLVFLWGFREGMTAPLLKASLEGSHEVFCEEF- 556
                       +   W   V K    ++V +W F         K    G  E  C+ F 
Sbjct: 511 RGDIIDLRTGHSNADNWR--VSKFKYENIVLIWNFPR-------KLKARGIKECICKAFG 570

Query: 557 -----YVRFVDKKCAIIVFSQPGLSETFL----DAINSDCIVGSLREM--VSEG--LRAT 585
                 V  VD     ++F    L   FL       +SD  V  L  +  + EG    A 
Sbjct: 571 SASVTSVYHVDDSAVFVLFKNSELVWDFLALKRQLESSDGPVSVLHPLSKILEGGNTGAA 630

[Close]

BLAST of Cmc01g0026341 vs. ExPASy Swiss-Prot
Match: Q90ZA1 (Poly(A)-specific ribonuclease PARN OS=Xenopus laevis OX=8355 GN=parn PE=1 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 8.1e-21
Identity = 97/361 (26.87%), Postives = 160/361 (44.32%), Query Frame = 0


Query: 26  QVRNSNFHSCLGDLKNHISDSDFIALSLQRTGSSSFP--WHRPQPFDTLDTAYCKAKYAA 85
           ++  SNF   L  +   I ++DF+A+  + +G S  P        FDT +  Y K K  +
Sbjct: 2   EITRSNFKDTLPKVYKAIEEADFLAIDGEFSGISDGPSVSTLTNGFDTPEERYTKLKKHS 61

Query: 86  EKFQILQFSLCPFSV--RDSKLIAHPYNFHLFPRDELNIGMPSYSFSCQVSHLTSIAREG 145
            +F + QF LC F+    ++K +   +NF++FP+   N   P   F CQ S +  +A +G
Sbjct: 62  MEFLLFQFGLCTFNYDNTEAKYLMKSFNFYIFPK-PFNRNSPDKKFVCQSSSIDFLANQG 121

Query: 146 FDFGAWVYDGISYLSRAQESIAKAQM--------GCQT---LTPNTD--AVKSSSEPSVF 205
           FDF     +GI YL++ +E + + Q         G  T   ++PN+    V    E   F
Sbjct: 122 FDFNKVFRNGIPYLNQEEERVLRDQYEDRRSQSNGASTMSYISPNSSKTPVSIPDEQKGF 181

Query: 206 DTIFVQRVKSRVKNWKDAYDSSSKTNDALLSTLKKLIVGIEQYGSRPSIVID-VYSERQT 265
               V+RV+  +KN     +  S   +      +KLI     +     I ++ V SE++ 
Sbjct: 182 IDKVVERVEDFLKN-----EQKSMNVEPCTGYQRKLIYQTLNWKYPRGIHVETVESEKKE 241

Query: 266 LLALELLKEFSDDVVPVVISAKSGGTQAIRAILTSSKEDKILLEKELQNLEDEENKKFRG 325
                           +VIS                +E++  +E++ Q  E EE     G
Sbjct: 242 RY--------------IVIS-------------KVDEEERKRMEQQKQAKEREELDDAVG 301

Query: 326 FREVIEMISASQKPIVSYSSLHDFTFIHSKFLAPLPTSIDEFASSLHLVFPRVLEVKHLM 369
           F  +I+ IS+S K +V ++ L D      +F   LP  ++EF    + VFPRVL+ K + 
Sbjct: 302 FSRIIQAISSSGKLVVGHNMLLDVMHTIHQFFCQLPDELNEFKEVTNCVFPRVLDTKLMA 329

[Close]

BLAST of Cmc01g0026341 vs. ExPASy Swiss-Prot
Match: P69341 (Poly(A)-specific ribonuclease PARN OS=Bos taurus OX=9913 GN=PARN PE=1 SV=2)

HSP 1 Score: 100.5 bits (249), Expect = 6.8e-20
Identity = 95/358 (26.54%), Postives = 146/358 (40.78%), Query Frame = 0


Query: 26  QVRNSNFHSCLGDLKNHISDSDFIALSLQRTGSSSFP--WHRPQPFDTLDTAYCKAKYAA 85
           ++  SNF S L  +   I ++DF A+  + +G S  P        FDT +  Y K K  +
Sbjct: 2   EIIRSNFKSNLHKVYQAIEEADFFAIDGEFSGISDGPSVTALTNGFDTPEERYQKLKKHS 61

Query: 86  EKFQILQFSLCPF--SVRDSKLIAHPYNFHLFPRDELNIGMPSYSFSCQVSHLTSIAREG 145
             F + QF LC F     DSK I   +NF++FP+   N   P   F CQ S +  +A +G
Sbjct: 62  MDFLLFQFGLCTFKYDYTDSKYITKSFNFYVFPK-PFNRSSPDVKFVCQSSSIDFLASQG 121

Query: 146 FDFGAWVYDGISYLSRAQESIAKAQMGCQTLTPNTDAVKSSSEPSVFDTIFVQRVKSRVK 205
           FDF     +GI YL++ +E   + Q   +    N     S + P+              K
Sbjct: 122 FDFNKVFRNGIPYLNQEEERQLREQYDEKRSQSNGAGALSYTSPNT------------SK 181

Query: 206 NWKDAYDSSSKTNDALLSTLKKLIVGIEQYGSRPSIVIDVYSERQTLLALELLKEFSDDV 265
                 D   K  D ++  ++ L+                 SE    L LE    F   +
Sbjct: 182 CPVTIPDDQKKFIDQVVEKIEDLL----------------QSEENKNLDLEPCTGFQRKL 241

Query: 266 VPVVISAKSGGTQAIRAILTSSKEDKILL-----------EKELQNLEDEENKKFRGFRE 325
           +   +S K      +  + T  KE  I++           E++    E EE     GF  
Sbjct: 242 IYQTLSWKYPKGIHVETLETEKKERYIVISKVDEEERKRREQQKHAKEQEELNDAVGFSR 301

Query: 326 VIEMISASQKPIVSYSSLHDFTFIHSKFLAPLPTSIDEFASSLHLVFPRVLEVKHLMS 369
           VI  I+ S K ++ ++ L D      +F  PLP  ++EF      VFPR+L+ K + S
Sbjct: 302 VIHAIANSGKLVIGHNMLLDVMHTVHQFYCPLPADLNEFKEMTTCVFPRLLDTKLMAS 330

[Close]

BLAST of Cmc01g0026341 vs. ExPASy Swiss-Prot
Match: O95453 (Poly(A)-specific ribonuclease PARN OS=Homo sapiens OX=9606 GN=PARN PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 4.4e-19
Identity = 96/358 (26.82%), Postives = 145/358 (40.50%), Query Frame = 0


Query: 26  QVRNSNFHSCLGDLKNHISDSDFIALSLQRTGSSSFP--WHRPQPFDTLDTAYCKAKYAA 85
           ++  SNF S L  +   I ++DF A+  + +G S  P        FDT +  Y K K  +
Sbjct: 2   EIIRSNFKSNLHKVYQAIEEADFFAIDGEFSGISDGPSVSALTNGFDTPEERYQKLKKHS 61

Query: 86  EKFQILQFSLCPF--SVRDSKLIAHPYNFHLFPRDELNIGMPSYSFSCQVSHLTSIAREG 145
             F + QF LC F     DSK I   +NF++FP+   N   P   F CQ S +  +A +G
Sbjct: 62  MDFLLFQFGLCTFKYDYTDSKYITKSFNFYVFPK-PFNRSSPDVKFVCQSSSIDFLASQG 121

Query: 146 FDFGAWVYDGISYLSRAQESIAKAQMGCQTLTPNTDAVKSSSEPSVFDTIFVQRVKSRVK 205
           FDF     +GI YL++ +E   + Q   +    N     S   P                
Sbjct: 122 FDFNKVFRNGIPYLNQEEERQLREQYDEKRSQANGAGALSYVSP---------------- 181

Query: 206 NWKDAYDSSSKTNDALLSTLKKLIVGIEQYGSRPSIVIDVYSERQTLLALELLKEFSDDV 265
                  ++SK    +    KK I  + +      I   + SE    L LE    F   +
Sbjct: 182 -------NTSKCPVTIPEDQKKFIDQVVE-----KIEDLLQSEENKNLDLEPCTGFQRKL 241

Query: 266 VPVVISAKSGGTQAIRAILTSSKEDKILL-----------EKELQNLEDEENKKFRGFRE 325
           +   +S K      +  + T  KE  I++           E++    E EE     GF  
Sbjct: 242 IYQTLSWKYPKGIHVETLETEKKERYIVISKVDEEERKRREQQKHAKEQEELNDAVGFSR 301

Query: 326 VIEMISASQKPIVSYSSLHDFTFIHSKFLAPLPTSIDEFASSLHLVFPRVLEVKHLMS 369
           VI  I+ S K ++ ++ L D      +F  PLP  + EF      VFPR+L+ K + S
Sbjct: 302 VIHAIANSGKLVIGHNMLLDVMHTVHQFYCPLPADLSEFKEMTTCVFPRLLDTKLMAS 330

[Close]

BLAST of Cmc01g0026341 vs. ExPASy TrEMBL
Match: A0A5A7V1F6 (Poly(A)-specific ribonuclease PARN-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold54G00470 PE=3 SV=1)

HSP 1 Score: 1225.7 bits (3170), Expect = 0.0e+00
Identity = 610/612 (99.67%), Postives = 610/612 (99.67%), Query Frame = 0


Query: 1   MASRFSYFQLHRRLYTTTTDQWSIKQVRNSNFHSCLGDLKNHISDSDFIALSLQRTGSSS 60
           MASRFSYFQLHRRLYTTTTDQWSIKQVRNSNFH CLGDLKNHISDSDFIALSLQRTGSSS
Sbjct: 1   MASRFSYFQLHRRLYTTTTDQWSIKQVRNSNFHGCLGDLKNHISDSDFIALSLQRTGSSS 60

Query: 61  FPWHRPQPFDTLDTAYCKAKYAAEKFQILQFSLCPFSVRDSKLIAHPYNFHLFPRDELNI 120
           FPWHRPQPFDTLDTAYCKAKYAAEKFQILQFSLCPFSVRDSKLIAHPYNFHLFPRDELNI
Sbjct: 61  FPWHRPQPFDTLDTAYCKAKYAAEKFQILQFSLCPFSVRDSKLIAHPYNFHLFPRDELNI 120

Query: 121 GMPSYSFSCQVSHLTSIAREGFDFGAWVYDGISYLSRAQESIAKAQMGCQTLTPNTDAVK 180
           GMPSYSFSCQVSHLTSIAREGFDFGAWVYDGISYLSRAQESIAKAQMGCQTLTPNTDAVK
Sbjct: 121 GMPSYSFSCQVSHLTSIAREGFDFGAWVYDGISYLSRAQESIAKAQMGCQTLTPNTDAVK 180

Query: 181 SSSEPSVFDTIFVQRVKSRVKNWKDAYDSSSKTNDALLSTLKKLIVGIEQYGSRPSIVID 240
           SSSEPSVFDTIFVQRVKSRVKNWKDAYDSSSKTNDALLSTLKKLIVGIEQYGSRPSIVID
Sbjct: 181 SSSEPSVFDTIFVQRVKSRVKNWKDAYDSSSKTNDALLSTLKKLIVGIEQYGSRPSIVID 240

Query: 241 VYSERQTLLALELLKEFSDDVVPVVISAKSGGTQAIRAILTSSKEDKILLEKELQNLEDE 300
           VYSERQ LLALELLKEFSDDVVPVVISAKSGGTQAIRAILTSSKEDKILLEKELQNLEDE
Sbjct: 241 VYSERQALLALELLKEFSDDVVPVVISAKSGGTQAIRAILTSSKEDKILLEKELQNLEDE 300

Query: 301 ENKKFRGFREVIEMISASQKPIVSYSSLHDFTFIHSKFLAPLPTSIDEFASSLHLVFPRV 360
           ENKKFRGFREVIEMISASQKPIVSYSSLHDFTFIHSKFLAPLPTSIDEFASSLHLVFPRV
Sbjct: 301 ENKKFRGFREVIEMISASQKPIVSYSSLHDFTFIHSKFLAPLPTSIDEFASSLHLVFPRV 360

Query: 361 LEVKHLMSKIGGLSKPMSIAAALSYLKKHYYAPTYLDIPIEAPGNDHKPQGHNAIRLCHL 420
           LEVKHLMSKIGGLSKPMSIAAALSYLKKHYYAPTYLDIPIEAPGNDHKPQGHNAIRLCHL
Sbjct: 361 LEVKHLMSKIGGLSKPMSIAAALSYLKKHYYAPTYLDIPIEAPGNDHKPQGHNAIRLCHL 420

Query: 421 FAKVCSLLKIDLSGVQSNNNECLASMLEKCSNVSSSFSPYHHEPKDEDVKIWARDVRKAS 480
           FAKVCSLLKIDLSGVQSNNNECLASMLEKCSNVSSSFSPYHHEPKDEDVKIWARDVRKAS
Sbjct: 421 FAKVCSLLKIDLSGVQSNNNECLASMLEKCSNVSSSFSPYHHEPKDEDVKIWARDVRKAS 480

Query: 481 CRHLVFLWGFREGMTAPLLKASLEGSHEVFCEEFYVRFVDKKCAIIVFSQPGLSETFLDA 540
           CRHLVFLWGFREGMTAPLLKASLEGSHEVFCEEFYVRFVDKKCAIIVFSQPGLSETFLDA
Sbjct: 481 CRHLVFLWGFREGMTAPLLKASLEGSHEVFCEEFYVRFVDKKCAIIVFSQPGLSETFLDA 540

Query: 541 INSDCIVGSLREMVSEGLRATGYETYKRMCRFDLWEADLAESLERAIFEADPETAQLDIN 600
           INSDCIVGSLREMVSEGLRATGYETYKRMCRFDLWEADLAESLERAIFEADPETAQLDIN
Sbjct: 541 INSDCIVGSLREMVSEGLRATGYETYKRMCRFDLWEADLAESLERAIFEADPETAQLDIN 600

Query: 601 YSNDTVISLDDL 613
           YSNDTVISLDDL
Sbjct: 601 YSNDTVISLDDL 612

[Close]

BLAST of Cmc01g0026341 vs. ExPASy TrEMBL
Match: A0A5D3CA51 (Poly(A)-specific ribonuclease PARN-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold886G00350 PE=3 SV=1)

HSP 1 Score: 1202.6 bits (3110), Expect = 0.0e+00
Identity = 605/629 (96.18%), Postives = 607/629 (96.50%), Query Frame = 0


Query: 1   MASRFSYFQLHRRLYTTTTDQWSIKQVRNSNFHSCLGDLKNHISDSDFIALSLQRTGSSS 60
           MASRFSYFQLHRRLYTTTTDQWSIKQVRNSNFH CLGDLKNHISDSDFIALSLQRTGSSS
Sbjct: 1   MASRFSYFQLHRRLYTTTTDQWSIKQVRNSNFHGCLGDLKNHISDSDFIALSLQRTGSSS 60

Query: 61  FPWHRPQPFDTLDTAYCKAKYAAEKFQILQFSLCPFSVRDSKLIAHPYNFHLFPRDELNI 120
           FPWHRPQPFDTLDTAYCKAKYAAEKFQILQFSLCPFSVRDSKLIAHPYNFHLFPRDELNI
Sbjct: 61  FPWHRPQPFDTLDTAYCKAKYAAEKFQILQFSLCPFSVRDSKLIAHPYNFHLFPRDELNI 120

Query: 121 GMPSYSFSCQVSHLTSIAREGFDFGAWVYD----GISYL-------------SRAQESIA 180
           GMPSYSFSCQVSHLTSIAREGFDFGAWVYD    G+ +L               AQESIA
Sbjct: 121 GMPSYSFSCQVSHLTSIAREGFDFGAWVYDDSTMGLQWLDILQEFFFCPLRAKTAQESIA 180

Query: 181 KAQMGCQTLTPNTDAVKSSSEPSVFDTIFVQRVKSRVKNWKDAYDSSSKTNDALLSTLKK 240
           KAQMGCQTLTPNTDAVKSSSEPSVFDTIFVQRVKSRVKNWKDAYDSSSKTNDALLSTLKK
Sbjct: 181 KAQMGCQTLTPNTDAVKSSSEPSVFDTIFVQRVKSRVKNWKDAYDSSSKTNDALLSTLKK 240

Query: 241 LIVGIEQYGSRPSIVIDVYSERQTLLALELLKEFSDDVVPVVISAKSGGTQAIRAILTSS 300
           LIVGIEQYGSRPSIVIDVYSERQ LLALELLKEFSDDVVPVVISAKSGGTQAIRAILTSS
Sbjct: 241 LIVGIEQYGSRPSIVIDVYSERQALLALELLKEFSDDVVPVVISAKSGGTQAIRAILTSS 300

Query: 301 KEDKILLEKELQNLEDEENKKFRGFREVIEMISASQKPIVSYSSLHDFTFIHSKFLAPLP 360
           KEDKILLEKELQNLEDEENKKFRGFREVIEMISASQKPIVSYSSLHDFTFIHSKFLAPLP
Sbjct: 301 KEDKILLEKELQNLEDEENKKFRGFREVIEMISASQKPIVSYSSLHDFTFIHSKFLAPLP 360

Query: 361 TSIDEFASSLHLVFPRVLEVKHLMSKIGGLSKPMSIAAALSYLKKHYYAPTYLDIPIEAP 420
           TSIDEFASSLHLVFPRVLEVKHLMSKIGGLSKPMSIAAALSYLKKHYYAPTYLDIPIEAP
Sbjct: 361 TSIDEFASSLHLVFPRVLEVKHLMSKIGGLSKPMSIAAALSYLKKHYYAPTYLDIPIEAP 420

Query: 421 GNDHKPQGHNAIRLCHLFAKVCSLLKIDLSGVQSNNNECLASMLEKCSNVSSSFSPYHHE 480
           GNDHKPQGHNAIRLCHLFAKVCSLLKIDLSGVQSNNNECLASMLEKCSNVSSSFSPYHHE
Sbjct: 421 GNDHKPQGHNAIRLCHLFAKVCSLLKIDLSGVQSNNNECLASMLEKCSNVSSSFSPYHHE 480

Query: 481 PKDEDVKIWARDVRKASCRHLVFLWGFREGMTAPLLKASLEGSHEVFCEEFYVRFVDKKC 540
           PKDEDVKIWARDVRKASCRHLVFLWGFREGMTAPLLKASLEGSHEVFCEEFYVRFVDKKC
Sbjct: 481 PKDEDVKIWARDVRKASCRHLVFLWGFREGMTAPLLKASLEGSHEVFCEEFYVRFVDKKC 540

Query: 541 AIIVFSQPGLSETFLDAINSDCIVGSLREMVSEGLRATGYETYKRMCRFDLWEADLAESL 600
           AIIVFSQPGLSETFLDAINSDCIVGSLREMVSEGLRATGYETYKRMCRFDLWEADLAESL
Sbjct: 541 AIIVFSQPGLSETFLDAINSDCIVGSLREMVSEGLRATGYETYKRMCRFDLWEADLAESL 600

Query: 601 ERAIFEADPETAQLDINYSNDTVISLDDL 613
           ERAIFEADPETAQLDINYSNDTVISLDDL
Sbjct: 601 ERAIFEADPETAQLDINYSNDTVISLDDL 629

[Close]

BLAST of Cmc01g0026341 vs. ExPASy TrEMBL
Match: A0A1S3BT38 (poly(A)-specific ribonuclease PARN-like OS=Cucumis melo OX=3656 GN=LOC103492866 PE=3 SV=1)

HSP 1 Score: 1147.9 bits (2968), Expect = 0.0e+00
Identity = 576/612 (94.12%), Postives = 584/612 (95.42%), Query Frame = 0


Query: 1   MASRFSYFQLHRRLYTTTTDQWSIKQVRNSNFHSCLGDLKNHISDSDFIALSLQRTGSSS 60
           MASRFSYFQLHRRLYTTTTDQWSIKQVRNSNFHSCLGDLKNHISDSDFIALSLQRTGSSS
Sbjct: 1   MASRFSYFQLHRRLYTTTTDQWSIKQVRNSNFHSCLGDLKNHISDSDFIALSLQRTGSSS 60

Query: 61  FPWHRPQPFDTLDTAYCKAKYAAEKFQILQFSLCPFSVRDSKLIAHPYNFHLFPRDELNI 120
           FPWHRPQPFDTLDTAYCKAKYAAEKFQILQFSLCPFSVRDSKLIAHPYNFHLFPRDELNI
Sbjct: 61  FPWHRPQPFDTLDTAYCKAKYAAEKFQILQFSLCPFSVRDSKLIAHPYNFHLFPRDELNI 120

Query: 121 GMPSYSFSCQVSHLTSIAREGFDFGAWVYDGISYLSRAQESIAKAQMGCQTLTPNTDAVK 180
           GMPSYSFSCQVSHLTSIAREGFDFGAWVYDGISYLSRAQESIAKAQMGCQTLTPNTDAVK
Sbjct: 121 GMPSYSFSCQVSHLTSIAREGFDFGAWVYDGISYLSRAQESIAKAQMGCQTLTPNTDAVK 180

Query: 181 SSSEPSVFDTIFVQRVKSRVKNWKDAYDSSSKTNDALLSTLKKLIVGIEQYGSRPSIVID 240
           SSSEPSVFDTIFVQRVKSRVKNWKDAYDSSSKTNDALLSTLKKLIVGIEQYGSRPSIVID
Sbjct: 181 SSSEPSVFDTIFVQRVKSRVKNWKDAYDSSSKTNDALLSTLKKLIVGIEQYGSRPSIVID 240

Query: 241 VYSERQTLLALELLKEFSDDVVPVVISAKSGGTQAIRAILTSSKEDKILLEKELQNLEDE 300
           VYSERQTLLALE+      D++   I            +  + K   + ++KELQNLEDE
Sbjct: 241 VYSERQTLLALEM------DLLECAIQ-----------LCRTCKLFCVPVQKELQNLEDE 300

Query: 301 ENKKFRGFREVIEMISASQKPIVSYSSLHDFTFIHSKFLAPLPTSIDEFASSLHLVFPRV 360
           ENKKFRGFREVIEMISASQKPIVSYSSLHDFTFIHSKFLAPLPTSIDEFASSLHLVFPRV
Sbjct: 301 ENKKFRGFREVIEMISASQKPIVSYSSLHDFTFIHSKFLAPLPTSIDEFASSLHLVFPRV 360

Query: 361 LEVKHLMSKIGGLSKPMSIAAALSYLKKHYYAPTYLDIPIEAPGNDHKPQGHNAIRLCHL 420
           LEVKHLMSKIGGLSKPMSIAAALSYLKKHYYAPTYLDIPIEAPGNDHKPQGHNAIRLCHL
Sbjct: 361 LEVKHLMSKIGGLSKPMSIAAALSYLKKHYYAPTYLDIPIEAPGNDHKPQGHNAIRLCHL 420

Query: 421 FAKVCSLLKIDLSGVQSNNNECLASMLEKCSNVSSSFSPYHHEPKDEDVKIWARDVRKAS 480
           FAKVCSLLKIDLSGVQSNNNECLASMLEKCSNVSSSFSPYHHEPKDEDVKIWARDVRKAS
Sbjct: 421 FAKVCSLLKIDLSGVQSNNNECLASMLEKCSNVSSSFSPYHHEPKDEDVKIWARDVRKAS 480

Query: 481 CRHLVFLWGFREGMTAPLLKASLEGSHEVFCEEFYVRFVDKKCAIIVFSQPGLSETFLDA 540
           CRHLVFLWGFREGMTAPLLKASLEGSHEVFCEEFYVRFVDKKCAIIVFSQPGLSETFLDA
Sbjct: 481 CRHLVFLWGFREGMTAPLLKASLEGSHEVFCEEFYVRFVDKKCAIIVFSQPGLSETFLDA 540

Query: 541 INSDCIVGSLREMVSEGLRATGYETYKRMCRFDLWEADLAESLERAIFEADPETAQLDIN 600
           INSDCIVGSLREMVSEGLRATGYETYKRMCRFDLWEADLAESLERAIFEADPETAQLDIN
Sbjct: 541 INSDCIVGSLREMVSEGLRATGYETYKRMCRFDLWEADLAESLERAIFEADPETAQLDIN 595

Query: 601 YSNDTVISLDDL 613
           YSNDTVISLDDL
Sbjct: 601 YSNDTVISLDDL 595

[Close]

BLAST of Cmc01g0026341 vs. ExPASy TrEMBL
Match: A0A6J1GP80 (poly(A)-specific ribonuclease PARN-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456191 PE=3 SV=1)

HSP 1 Score: 964.1 bits (2491), Expect = 2.7e-277
Identity = 484/619 (78.19%), Postives = 543/619 (87.72%), Query Frame = 0


Query: 1   MASRFSYFQLHRRLYTTTTDQWSIKQVRNSNFHSCLGDLKNHISDSDFIALSLQRTGSSS 60
           MASRFS  +L RR   T T+Q S++Q+RN++F+ CLGDLKNHISDSDFIALSLQ TGSSS
Sbjct: 1   MASRFSSLRLQRRRLHTATNQLSVRQIRNTDFYGCLGDLKNHISDSDFIALSLQNTGSSS 60

Query: 61  FPWHRPQPFDTLDTAYCKAKYAAEKFQILQFSLCPFSVRDSKLIAHPYNFHLFPRDELNI 120
           FPWHR Q FDT DTAYCKAKYAAEKFQILQF+LCPFSVR+SKLIAHPYNFHLFPRD+LNI
Sbjct: 61  FPWHRLQSFDTYDTAYCKAKYAAEKFQILQFALCPFSVRESKLIAHPYNFHLFPRDDLNI 120

Query: 121 GMPSYSFSCQVSHLTSIAREGFDFGAWVYDGISYLSRAQESIAKAQMGCQTLTPNTDAVK 180
           GMPSYSFSCQVSHLTS+AREGFDF A +YDGISYLSRAQESIAK ++G   LTP+T AVK
Sbjct: 121 GMPSYSFSCQVSHLTSMAREGFDFDACIYDGISYLSRAQESIAKVRIGRSFLTPSTYAVK 180

Query: 181 SSSEPSVFDTIFVQRVKSRVKNWKDAYDSSSKTNDALLSTLKKLIVGIEQYGSRPSIVID 240
           SSS  ++ D++FVQRVKSRVKNWKDA +SS+KTNDALLS+LKKLI+G EQYGSRPS+ ID
Sbjct: 181 SSSRQTIADSVFVQRVKSRVKNWKDACNSSTKTNDALLSSLKKLIIGSEQYGSRPSMTID 240

Query: 241 VYSERQTLLALELLKEFSDDVVPVVISAKSGGTQAIRAILTSSKEDKILLEKELQNLEDE 300
           V SERQ LL LELL EFSDD+VPVV  AK GGTQAIRAILTSSKEDKILLEKELQNLE+E
Sbjct: 241 VCSERQVLLVLELLSEFSDDLVPVVNPAKGGGTQAIRAILTSSKEDKILLEKELQNLEEE 300

Query: 301 ENKKFRGFREVIEMISASQKPIVSYSSLHDFTFIHSKFLAPLPTSIDEFASSLHLVFPRV 360
           ENKKFRGFREV+++ISASQKPI+SY+SL+DF FIHSKFLAPLPT +DEFASSLHLVFPRV
Sbjct: 301 ENKKFRGFREVVDIISASQKPILSYNSLNDFAFIHSKFLAPLPTGMDEFASSLHLVFPRV 360

Query: 361 LEVKHLMSKIGGLSKPMSIAAALSYLKKHYYAPTYLDIPIEAPGNDHKPQGHNAIRLCHL 420
           L+VKHL+SKIGGLSKP+SIA+ALSYLK HY+AP  LDIP+EA GND K  GHNAI LCHL
Sbjct: 361 LDVKHLISKIGGLSKPISIASALSYLKNHYFAPIDLDIPVEATGNDRKFHGHNAILLCHL 420

Query: 421 FAKVCSLLKIDLSGVQSNNNECLASMLEKCSNVSSSFSPYHHEPKDEDVKIWARDVRKAS 480
           FAK CS+LKIDL GVQSNNN CLAS L+ C+NV  SFSP HHE +DED+KI  ++VRK S
Sbjct: 421 FAKACSVLKIDLGGVQSNNN-CLASKLDGCANVFGSFSPDHHESEDEDIKISTKNVRKVS 480

Query: 481 CRHLVFLWGFREGMTAPLLKASLEGSHEVFCEEFYVRFVDKKCAIIVFSQPGLSETFLDA 540
           CRHLVFLWGFR+GMTA  +K +LEGSHEVFCEEF VRFVDKKCAI+VF QPGLSE FLDA
Sbjct: 481 CRHLVFLWGFRDGMTAQSMKTALEGSHEVFCEEFDVRFVDKKCAIVVFWQPGLSEAFLDA 540

Query: 541 INSDCIVGSLREMVSEGLRATGYETYKRMCRFDLWEADLAESLERA-------IFEADPE 600
           INSD IVG L++MVSEGL+ATGYETYKR+CR  LWEADLAESLERA        FEADPE
Sbjct: 541 INSDGIVGCLKDMVSEGLKATGYETYKRVCRLGLWEADLAESLERASSEQHHSSFEADPE 600

Query: 601 TAQLDINYSNDTVISLDDL 613
           T +LDI YSND++I+L DL
Sbjct: 601 TERLDIYYSNDSIINLADL 618

[Close]

BLAST of Cmc01g0026341 vs. ExPASy TrEMBL
Match: A0A6J1JW45 (poly(A)-specific ribonuclease PARN-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488047 PE=3 SV=1)

HSP 1 Score: 953.4 bits (2463), Expect = 4.7e-274
Identity = 479/619 (77.38%), Postives = 537/619 (86.75%), Query Frame = 0


Query: 1   MASRFSYFQLHRRLYTTTTDQWSIKQVRNSNFHSCLGDLKNHISDSDFIALSLQRTGSSS 60
           MASRFS  QL RR     T+Q S++Q+RNS+F+ CLGDLKNHISDSDFIALSLQ TGSSS
Sbjct: 1   MASRFSSLQLQRRRLHIATNQLSVRQIRNSDFYGCLGDLKNHISDSDFIALSLQNTGSSS 60

Query: 61  FPWHRPQPFDTLDTAYCKAKYAAEKFQILQFSLCPFSVRDSKLIAHPYNFHLFPRDELNI 120
           FPWHR Q FDT DTAYCKAKYAAEKFQILQF+LCPFSVR+SKLIAHPYNFHLFPRD+LNI
Sbjct: 61  FPWHRLQSFDTYDTAYCKAKYAAEKFQILQFALCPFSVRESKLIAHPYNFHLFPRDDLNI 120

Query: 121 GMPSYSFSCQVSHLTSIAREGFDFGAWVYDGISYLSRAQESIAKAQMGCQTLTPNTDAVK 180
           GMPSYSFSCQVSHLTS+A EGFDF A +YDGISYLSRAQESIAK ++G   LTP+T  VK
Sbjct: 121 GMPSYSFSCQVSHLTSMAHEGFDFDACIYDGISYLSRAQESIAKVRIGRPILTPSTYDVK 180

Query: 181 SSSEPSVFDTIFVQRVKSRVKNWKDAYDSSSKTNDALLSTLKKLIVGIEQYGSRPSIVID 240
           SSS  ++ D++FVQRVKSRVKNWKDA +SS+KTNDALLS+LKKLI+G E+YGSRPS+ ID
Sbjct: 181 SSSRQTIADSVFVQRVKSRVKNWKDACNSSTKTNDALLSSLKKLIIGSEEYGSRPSMTID 240

Query: 241 VYSERQTLLALELLKEFSDDVVPVVISAKSGGTQAIRAILTSSKEDKILLEKELQNLEDE 300
           V SERQ LL LELL EFSDD+VPVVI  K GGTQAIRAI TSSKEDKILLEKELQNLE+E
Sbjct: 241 VCSERQVLLVLELLSEFSDDLVPVVIPTKGGGTQAIRAIWTSSKEDKILLEKELQNLEEE 300

Query: 301 ENKKFRGFREVIEMISASQKPIVSYSSLHDFTFIHSKFLAPLPTSIDEFASSLHLVFPRV 360
           ENKKFRGFREV+++ISASQKPIVSY+SL+DF F+HSKFLAPLPT IDEFASSLHLVFPRV
Sbjct: 301 ENKKFRGFREVVDIISASQKPIVSYNSLNDFAFVHSKFLAPLPTGIDEFASSLHLVFPRV 360

Query: 361 LEVKHLMSKIGGLSKPMSIAAALSYLKKHYYAPTYLDIPIEAPGNDHKPQGHNAIRLCHL 420
           L+VKHL+SKIGGLSKP SIA+ALSYLK HY+AP  LDIP+EA GND K  GHNAI +CHL
Sbjct: 361 LDVKHLISKIGGLSKPTSIASALSYLKNHYFAPIDLDIPVEATGNDRKFHGHNAILVCHL 420

Query: 421 FAKVCSLLKIDLSGVQSNNNECLASMLEKCSNVSSSFSPYHHEPKDEDVKIWARDVRKAS 480
           FAK CS+LKIDL GVQSNN  CLAS L+ C+NV  SFSP HH+ +DED+KI  ++VRK S
Sbjct: 421 FAKACSVLKIDLGGVQSNN--CLASKLDGCANVFGSFSPDHHKSEDEDIKISTKNVRKIS 480

Query: 481 CRHLVFLWGFREGMTAPLLKASLEGSHEVFCEEFYVRFVDKKCAIIVFSQPGLSETFLDA 540
           CRHLVFLWGFR+GMTA  +K +LEGSHEVFCEEF VRFVDKKCAI+VF QPGLSE FLDA
Sbjct: 481 CRHLVFLWGFRDGMTARSMKTALEGSHEVFCEEFDVRFVDKKCAIVVFWQPGLSEAFLDA 540

Query: 541 INSDCIVGSLREMVSEGLRATGYETYKRMCRFDLWEADLAESLERAI-------FEADPE 600
           INSD IVG L++MVSEGL+ATGYETYKR+CR  LWEADLAESLERA        FEADPE
Sbjct: 541 INSDGIVGCLKDMVSEGLKATGYETYKRVCRLGLWEADLAESLERATSEHHHSSFEADPE 600

Query: 601 TAQLDINYSNDTVISLDDL 613
           T +LDI YSND++I+L DL
Sbjct: 601 TERLDIYYSNDSIINLADL 617

[Close]

BLAST of Cmc01g0026341 vs. TAIR 10
Match: AT3G25430.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 591.7 bits (1524), Expect = 7.0e-169
Identity = 312/610 (51.15%), Postives = 429/610 (70.33%), Query Frame = 0


Query: 16  TTTTDQWSIKQVRNSNFHSCLGDLKNHISDSDFIALSLQRTGSSSFPWHRPQPFDTLDTA 75
           T    +WS+KQV+ SNFH  L +++  I  SDFIALSLQ TGS +  WHR    DT  T+
Sbjct: 18  TLNQGRWSVKQVKKSNFHVTLDEIRTSIDSSDFIALSLQNTGSYAAAWHRVSAIDTPQTS 77

Query: 76  YCKAKYAAEKFQILQFSLCPFSVRDSKLIAHPYNFHLFPRDELNIGMPSYSFSCQVSHLT 135
           Y KAKYAAE++QILQF+LCPFS++ SKL  HPYNFHLFPRDEL  GMPSYSFSCQ S LT
Sbjct: 78  YLKAKYAAERYQILQFALCPFSLQGSKLTVHPYNFHLFPRDELKCGMPSYSFSCQASRLT 137

Query: 136 SIAREGFDFGAWVYDGISYLSRAQESIAKAQMGCQTLTPNTDAVKSSSEP-SVFDTIFVQ 195
           ++AREGFDF   +Y+GISYLSRAQES +K       L    D+V  SS P +V DT+FV 
Sbjct: 138 AMAREGFDFNICIYEGISYLSRAQESASKFLSENPIL---ADSVTVSSSPATVADTVFVG 197

Query: 196 RVKSRVKNWKDA-YDSSSKT-NDALLSTLKKLIVGIEQYGSRPSIVIDVYSERQTLLALE 255
           R++SRVKNW+ +  DS SKT +D L+S+L++L++G EQYGSR  + IDV SERQ  L LE
Sbjct: 198 RIRSRVKNWRQSCIDSGSKTGDDDLVSSLRRLVLGSEQYGSRLCLTIDVCSERQVQLILE 257

Query: 256 LLKEFSDDVVPVVISAKSGGTQAIRAILTSSKEDKILLEKELQNLEDEENKKFRGFREVI 315
           +L EFSDDVVP+++++KS GTQA+R +  SSKEDK L ++EL++LE EEN++ RGFREV+
Sbjct: 258 MLTEFSDDVVPLLVASKSRGTQAVRTVFMSSKEDKDLFKRELKDLEKEENRRVRGFREVV 317

Query: 316 EMISASQKPIVSYSSLHDFTFIHSKFLAPLPTSIDEFASSLHLVFPRVLEVKHLMSKIGG 375
           + IS+SQKP+VS + L DFT IH+KFL PLP+++D+F+SSL   FP V+++   M +I  
Sbjct: 318 DFISSSQKPVVSQNYLSDFTSIHAKFLGPLPSNVDDFSSSLSSAFPNVVDLSQFMKEISP 377

Query: 376 LSKPMSIAAALSYLKKHYYAPTYLDI-----PIEAPGNDHKPQGHNAIRLCHLFAKVCSL 435
           LS   ++ AA+S L + ++AP  +++     P++     H+  G NA+ +  LFAK+C++
Sbjct: 378 LSNISNLPAAMSSLNR-FFAPVDVEVANQGCPVKL-DEGHQSHGQNAVMISQLFAKLCTI 437

Query: 436 LKIDLSGVQSNNNECLASMLEKCSNVSSSFSPYHHEPKDEDVKIWARDVRKASCRHLVFL 495
            K DLS +QSN +    +  E  ++V+S          DE+VK+W+++ R+ S  +LVF+
Sbjct: 438 QKSDLSTIQSNEDFQALASDEHANSVTSC----SKNAGDENVKVWSKNSRRVSSENLVFI 497

Query: 496 WGFREGMTAPLLKASLEGSHEVFCEEFYVRFVDKKCAIIVFSQPGLSETFLDAINS-DCI 555
           WG  + MTA  LK  L+ SH VF  EF V+++D+  AI+VF + G SETFL A+N+ + +
Sbjct: 498 WGLGKKMTAAKLKNVLQKSHPVFAREFDVKYIDRSSAILVFWESGPSETFLSAVNNEEQL 557

Query: 556 VGSLREMVSEGLRATGYETYKRMCRFDLWEADLAESLERAI----FEADPETAQLDINYS 613
            GSLREMV+EGLR  GYETYKR CR   WEADLAESL++A+     + D +T   +I++S
Sbjct: 558 DGSLREMVAEGLRGAGYETYKRACRLGFWEADLAESLDKALESSDTDPDSDTKPSEIDWS 617

[Close]

BLAST of Cmc01g0026341 vs. TAIR 10
Match: AT1G55870.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 197.2 bits (500), Expect = 3.8e-50
Identity = 160/623 (25.68%), Postives = 285/623 (45.75%), Query Frame = 0


Query: 17  TTTDQWSIKQVRNSNFHSCLGDLKNHISDSDFIALSLQRTGSSSFPWHRPQPFDTLDTAY 76
           + T  + +K V  SNF + L DL++ +  +DF+A+ L+ TG +S PW     FD  D  Y
Sbjct: 31  SATAAFPLKHVTRSNFETTLNDLRSLVKAADFVAIDLEMTGVTSAPWRDSLEFDRYDVRY 90

Query: 77  CKAKYAAEKFQILQFSLCPF--SVRDSKLIAHPYNFHLFPRDELNIGMPSYSFSCQVSHL 136
            K K +AEKF ++QF +CPF    R    +++P+NF +FPR EL    P++ F CQ + +
Sbjct: 91  LKVKDSAEKFAVVQFGVCPFRWDSRTQSFVSYPHNFFVFPRQELTFDPPAHEFLCQTTSM 150

Query: 137 TSIAREGFDFGAWVYDGISYLSRAQESIAKAQMGCQTLTPNTDAVKSSSEPS------VF 196
             +A+  FDF   +++GISYLSR +E  A  ++    +    D + SS E        + 
Sbjct: 151 DFLAKYQFDFNTCIHEGISYLSRREEEEASKRL---KMLHGEDGIDSSGETEELKLVRLA 210

Query: 197 DTIFVQRVKSRVKNWKDA--YDSSSKTNDALLSTLKKLIVGIEQYGSRPSIVIDVYSERQ 256
           D +F  R++  +  W+    +  ++ +    +S      +    +  RP++ +  ++  Q
Sbjct: 211 DVLFAARMEKLLNEWRSGLLHGGNASSEFPRISNGSNQSMETVFHHMRPALSLKGFTSHQ 270

Query: 257 TLLALELLKEFSDDVVPVVISAKSGGTQAIRAILTSSKEDKILLEKELQN----LEDEEN 316
             +   +L++   D+V +  + KS  ++ I  + T S  DK  L KE ++    L + + 
Sbjct: 271 LRVLNSVLRKHFGDLVYIHSNDKSSSSRDI-VVYTDSDSDKENLMKEAKDERKRLAERKI 330

Query: 317 KKFRGFREVIEMISASQKPIVSYSSLHDFTFIHSKFLAPLPTSIDEFASSLHLVFPRVLE 376
           +   GFR+VI+++++ +K IV ++   D   ++SKF+ PLP++ ++F +S++  FP +++
Sbjct: 331 QSAIGFRQVIDLLASEKKLIVGHNCFLDIAHVYSKFVGPLPSTAEKFVASINSHFPYIVD 390

Query: 377 VKHLMSKIGGLSKPM-----SIAAALSYL---------KKHYYAPTYLDIPIEA------ 436
            K L++    L + M     S+++A S L             +    ++I +E       
Sbjct: 391 TKILLNVNPMLHQRMKKSSTSLSSAFSSLCPQIEFSSRSSDSFLQQRVNIDVEIDNVRCS 450

Query: 437 ---PGNDHKPQGHNAIRLCHLFAKVCSLLKIDLSGVQSNNNECLASMLEKCSN-VSSSFS 496
               G  H+  G++A     +FA+ C+ L  D       ++      LEK  N +  S++
Sbjct: 451 NWNAGGKHE-AGYDAFMTGCIFAQACNHLGFDFKQHSQLDDFAQNEKLEKYINRLYLSWT 510

Query: 497 P---YHHEPKDEDVKIWARDVRKASCRHLVFLWGFREGMTAPLLKASLEGSHEVFCEEF- 556
                       +   W   V K    ++V +W F         K    G  E  C+ F 
Sbjct: 511 RGDIIDLRTGHSNADNWR--VSKFKYENIVLIWNFPR-------KLKARGIKECICKAFG 570

Query: 557 -----YVRFVDKKCAIIVFSQPGLSETFL----DAINSDCIVGSLREM--VSEG--LRAT 585
                 V  VD     ++F    L   FL       +SD  V  L  +  + EG    A 
Sbjct: 571 SASVTSVYHVDDSAVFVLFKNSELVWDFLALKRQLESSDGPVSVLHPLSKILEGGNTGAA 630

[Close]

BLAST of Cmc01g0026341 vs. TAIR 10
Match: AT1G55870.2 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 99.0 bits (245), Expect = 1.4e-20
Identity = 114/501 (22.75%), Postives = 214/501 (42.71%), Query Frame = 0


Query: 137 IAREGFDFGAWVYDGISYLSRAQESIAKAQMGCQTLTPNTDAVKSSSEPS------VFDT 196
           +A+  FDF   +++GISYLSR +E  A  ++    +    D + SS E        + D 
Sbjct: 4   LAKYQFDFNTCIHEGISYLSRREEEEASKRL---KMLHGEDGIDSSGETEELKLVRLADV 63

Query: 197 IFVQRVKSRVKNWKDA--YDSSSKTNDALLSTLKKLIVGIEQYGSRPSIVIDVYSERQTL 256
           +F  R++  +  W+    +  ++ +    +S      +    +  RP++ +  ++  Q  
Sbjct: 64  LFAARMEKLLNEWRSGLLHGGNASSEFPRISNGSNQSMETVFHHMRPALSLKGFTSHQLR 123

Query: 257 LALELLKEFSDDVVPVVISAKSGGTQAIRAILTSSKEDKILLEKELQN----LEDEENKK 316
           +   +L++   D+V +  + KS  ++ I  + T S  DK  L KE ++    L + + + 
Sbjct: 124 VLNSVLRKHFGDLVYIHSNDKSSSSRDI-VVYTDSDSDKENLMKEAKDERKRLAERKIQS 183

Query: 317 FRGFREVIEMISASQKPIVSYSSLHDFTFIHSKFLAPLPTSIDEFASSLHLVFPRVLEVK 376
             GFR+VI+++++ +K IV ++   D   ++SKF+ PLP++ ++F +S++  FP +++ K
Sbjct: 184 AIGFRQVIDLLASEKKLIVGHNCFLDIAHVYSKFVGPLPSTAEKFVASINSHFPYIVDTK 243

Query: 377 HLMSKIGGLSKPM-----SIAAALSYL---------KKHYYAPTYLDIPIEA-------- 436
            L++    L + M     S+++A S L             +    ++I +E         
Sbjct: 244 ILLNVNPMLHQRMKKSSTSLSSAFSSLCPQIEFSSRSSDSFLQQRVNIDVEIDNVRCSNW 303

Query: 437 -PGNDHKPQGHNAIRLCHLFAKVCSLLKIDLSGVQSNNNECLASMLEKCSN-VSSSFSP- 496
             G  H+  G++A     +FA+ C+ L  D       ++      LEK  N +  S++  
Sbjct: 304 NAGGKHE-AGYDAFMTGCIFAQACNHLGFDFKQHSQLDDFAQNEKLEKYINRLYLSWTRG 363

Query: 497 --YHHEPKDEDVKIWARDVRKASCRHLVFLWGFREGMTAPLLKASLEGSHEVFCEEF--- 556
                     +   W   V K    ++V +W F         K    G  E  C+ F   
Sbjct: 364 DIIDLRTGHSNADNWR--VSKFKYENIVLIWNFPR-------KLKARGIKECICKAFGSA 423

Query: 557 ---YVRFVDKKCAIIVFSQPGLSETFL----DAINSDCIVGSLREM--VSEG--LRATGY 585
               V  VD     ++F    L   FL       +SD  V  L  +  + EG    A  Y
Sbjct: 424 SVTSVYHVDDSAVFVLFKNSELVWDFLALKRQLESSDGPVSVLHPLSKILEGGNTGAADY 483

The following BLAST results are available for this feature:

BLAST of Cmc01g0026341 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0059619.1	0.0e+00	99.67	poly(A)-specific ribonuclease PARN-like [Cucumis melo var. makuwa]	[more]
TYK08152.1	0.0e+00	96.18	poly(A)-specific ribonuclease PARN-like [Cucumis melo var. makuwa]	[more]
XP_008451634.1	0.0e+00	94.12	PREDICTED: poly(A)-specific ribonuclease PARN-like [Cucumis melo]	[more]
XP_004148964.1	0.0e+00	88.56	poly(A)-specific ribonuclease PARN-like [Cucumis sativus] >KAE8646280.1 hypothet...	[more]
XP_038899639.1	8.0e-292	81.91	poly(A)-specific ribonuclease PARN-like isoform X2 [Benincasa hispida]	[more]

BLAST of Cmc01g0026341 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W4C3	9.8e-168	51.15	Poly(A)-specific ribonuclease PARN-like OS=Arabidopsis thaliana OX=3702 GN=At3g2...	[more]
Q9LG26	5.4e-49	25.68	Poly(A)-specific ribonuclease PARN OS=Arabidopsis thaliana OX=3702 GN=PARN PE=1 ...	[more]
Q90ZA1	8.1e-21	26.87	Poly(A)-specific ribonuclease PARN OS=Xenopus laevis OX=8355 GN=parn PE=1 SV=1	[more]
P69341	6.8e-20	26.54	Poly(A)-specific ribonuclease PARN OS=Bos taurus OX=9913 GN=PARN PE=1 SV=2	[more]
O95453	4.4e-19	26.82	Poly(A)-specific ribonuclease PARN OS=Homo sapiens OX=9606 GN=PARN PE=1 SV=1	[more]

BLAST of Cmc01g0026341 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V1F6	0.0e+00	99.67	Poly(A)-specific ribonuclease PARN-like OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3CA51	0.0e+00	96.18	Poly(A)-specific ribonuclease PARN-like OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3BT38	0.0e+00	94.12	poly(A)-specific ribonuclease PARN-like OS=Cucumis melo OX=3656 GN=LOC103492866 ...	[more]
A0A6J1GP80	2.7e-277	78.19	poly(A)-specific ribonuclease PARN-like isoform X1 OS=Cucurbita moschata OX=3662...	[more]
A0A6J1JW45	4.7e-274	77.38	poly(A)-specific ribonuclease PARN-like isoform X1 OS=Cucurbita maxima OX=3661 G...	[more]

BLAST of Cmc01g0026341 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G25430.1	7.0e-169	51.15	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G55870.1	3.8e-50	25.68	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G55870.2	1.4e-20	22.75	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 280..300
None	No IPR available	PANTHER	PTHR15092:SF42	POLY(A)-SPECIFIC RIBONUCLEASE PARN-LIKE	coord: 16..595
None	No IPR available	PANTHER	PTHR15092	POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1	coord: 16..595
IPR006941	Ribonuclease CAF1	PFAM	PF04857	CAF1	coord: 27..389 e-value: 1.0E-58 score: 199.1
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 275..462 e-value: 2.2E-22 score: 81.5 coord: 26..209 e-value: 1.3E-30 score: 108.6
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 24..433

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc01g0026341.1	Cmc01g0026341.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
cellular_component	GO:0016020	membrane
molecular_function	GO:0004518	nuclease activity
molecular_function	GO:0003676	nucleic acid binding