Cmc01g0025891 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc01g0025891
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Beta-galactosidase
Location	CMiso1.1chr01: 26880627 .. 26882053 (+)
RNA-Seq Expression	Cmc01g0025891
Synteny	Cmc01g0025891

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAACCCTACTGAACCTTGCACTAATAATACAATAAATGAGAATGACAGGTTTGATGTTGCTGTTCTTGAAAATGTGGAAGAAAAGAACAGTGGTGACGAAAATGAGGTCATAATAAAAACTAGTAACAATGAAGCTGAACAGGGTCATACAGGAAAACTTGACAAGCATGCTCCTTCTCTTGATCTTCCTATTGCACTGAGAAAAGGTACTAGGTCTTGTACAAAGCACTCCATATCTAATTATGTTTCATACGAGAATCTCTCACCACAGTTCAGAGCTTTTACTGCCAGTCTTGACTCTACCACAATACCGAAAGATATTCATATTGCTTTAGAATGCCCTGAATGGAAAAATGATGTCATGGAAGAGATGAAAGCTCTTGAAAAGAATAACACTTGGGAGATCTGTGCTCTACCCAAGGGACACAAGCCTGTGGGATGCAAATGGGTGTTCACTCTCAAATACAAAGCAGATGAAACACTTGACAGACATAAGACAAGGTTAGTTGCAAAAGGATTTACTCAGACATATGGTGTTGATTATTCAAAAACTTTTTCTCCTATTACTAAGTTGAATACTGTTAGAGTCTTTCTTTCTGTTGCTGTAAACAAAGATTGGTCTCTATATCAGCTGGATGTTAAGAATGCTTTTCTGAATGAATATCTAGTAAAGGAGATCTACATGAGCCCTCCACCTGGCTTTGAAGCCCAGTTTGGTCAACAGGTTTGCAAACTCCAAAAATCCTTATATGGTCTGAAACAGTCACCCAGAGCATGGTTTGACAGATTTACTACTTTTGTCAAGTCCCAAGGATACAGTCAAGGACCGGGAAGATTGCAGTTCTTATAGTTTATGTGGATGACATCATTTTATCTGGAGATGATCAGGCAGAAATCAATCAACTTAAGCAGAGAATGTGTAATGAATTTGAAATCAAGGATTTGGGAAATCTAACATATTTCCTTGGAATGGAGGTGGCCAGATCTAAAGAAGACATCTCCATGTCTCAGAGAAAATACACCCTTGATCTGCTAACCGAGACAGGTATGTTGGGATATCGTCCCGCTGACACTCCTATTGAATTCAACCGTAAACTAGGAAACTCTAATGATCAAGTTCCAGTTGATAAAGAACAATATCAGTGCCTCGTGGGTAAATTGATTTACTTATCTCATACTCGTTCTGGTATTTCCTTTGTTGTAAGTGATGTCAGCCAGTTTATGCAGGCTCCCTATGAGGAACACATGGAAGCTATCAAAAGAATTCTGAGATACTTAAAAACAACACCTGGTAAAGGGTTGATGTTTAGAAAGACAGATAAAAAGACCATTGAGGCATATACTGACTCGGATCGGGTAAGATCTGTTGTTGACAGAAAGTCTACCTCCAGTTATTGTACTTTGTTTGGGGCAATCTTGTAA

mRNA sequence

ATGGAAAACCCTACTGAACCTTGCACTAATAATACAATAAATGAGAATGACAGGTTTGATGTTGCTGTTCTTGAAAATGTGGAAGAAAAGAACAGTGGTGACGAAAATGAGGTCATAATAAAAACTAGTAACAATGAAGCTGAACAGGGTCATACAGGAAAACTTGACAAGCATGCTCCTTCTCTTGATCTTCCTATTGCACTGAGAAAAGGTACTAGGTCTTGTACAAAGCACTCCATATCTAATTATGTTTCATACGAGAATCTCTCACCACAGTTCAGAGCTTTTACTGCCAGTCTTGACTCTACCACAATACCGAAAGATATTCATATTGCTTTAGAATGCCCTGAATGGAAAAATGATGTCATGGAAGAGATGAAAGCTCTTGAAAAGAATAACACTTGGGAGATCTGTGCTCTACCCAAGGGACACAAGCCTGTGGGATGCAAATGGGTGTTCACTCTCAAATACAAAGCAGATGAAACACTTGACAGACATAAGACAAGGTTAGTTGCAAAAGGATTTACTCAGACATATGGTGTTGATTATTCAAAAACTTTTTCTCCTATTACTAAGTTGAATACTGTTAGAGTCTTTCTTTCTGTTGCTGTAAACAAAGATTGGTCTCTATATCAGCTGGATGTTAAGAATGCTTTTCTGAATGAATATCTAGTAAAGGAGATCTACATGAGCCCTCCACCTGGCTTTGAAGCCCAGTTTGGTCAACAGGCAGAAATCAATCAACTTAAGCAGAGAATGTGTAATGAATTTGAAATCAAGGATTTGGGAAATCTAACATATTTCCTTGGAATGGAGGTGGCCAGATCTAAAGAAGACATCTCCATGTCTCAGAGAAAATACACCCTTGATCTGCTAACCGAGACAGGTATGTTGGGATATCGTCCCGCTGACACTCCTATTGAATTCAACCGTAAACTAGGAAACTCTAATGATCAAGTTCCAGTTGATAAAGAACAATATCAGTGCCTCGTGGGTAAATTGATTTACTTATCTCATACTCGTTCTGGTATTTCCTTTGTTGTAAGTGATGTCAGCCAGTTTATGCAGGCTCCCTATGAGGAACACATGGAAGCTATCAAAAGAATTCTGAGATACTTAAAAACAACACCTGGTAAAGGGTTGATGTTTAGAAAGACAGATAAAAAGACCATTGAGGCATATACTGACTCGGATCGGGTAAGATCTGTTGTTGACAGAAAGTCTACCTCCAGTTATTGTACTTTGTTTGGGGCAATCTTGTAA

Coding sequence (CDS)

ATGGAAAACCCTACTGAACCTTGCACTAATAATACAATAAATGAGAATGACAGGTTTGATGTTGCTGTTCTTGAAAATGTGGAAGAAAAGAACAGTGGTGACGAAAATGAGGTCATAATAAAAACTAGTAACAATGAAGCTGAACAGGGTCATACAGGAAAACTTGACAAGCATGCTCCTTCTCTTGATCTTCCTATTGCACTGAGAAAAGGTACTAGGTCTTGTACAAAGCACTCCATATCTAATTATGTTTCATACGAGAATCTCTCACCACAGTTCAGAGCTTTTACTGCCAGTCTTGACTCTACCACAATACCGAAAGATATTCATATTGCTTTAGAATGCCCTGAATGGAAAAATGATGTCATGGAAGAGATGAAAGCTCTTGAAAAGAATAACACTTGGGAGATCTGTGCTCTACCCAAGGGACACAAGCCTGTGGGATGCAAATGGGTGTTCACTCTCAAATACAAAGCAGATGAAACACTTGACAGACATAAGACAAGGTTAGTTGCAAAAGGATTTACTCAGACATATGGTGTTGATTATTCAAAAACTTTTTCTCCTATTACTAAGTTGAATACTGTTAGAGTCTTTCTTTCTGTTGCTGTAAACAAAGATTGGTCTCTATATCAGCTGGATGTTAAGAATGCTTTTCTGAATGAATATCTAGTAAAGGAGATCTACATGAGCCCTCCACCTGGCTTTGAAGCCCAGTTTGGTCAACAGGCAGAAATCAATCAACTTAAGCAGAGAATGTGTAATGAATTTGAAATCAAGGATTTGGGAAATCTAACATATTTCCTTGGAATGGAGGTGGCCAGATCTAAAGAAGACATCTCCATGTCTCAGAGAAAATACACCCTTGATCTGCTAACCGAGACAGGTATGTTGGGATATCGTCCCGCTGACACTCCTATTGAATTCAACCGTAAACTAGGAAACTCTAATGATCAAGTTCCAGTTGATAAAGAACAATATCAGTGCCTCGTGGGTAAATTGATTTACTTATCTCATACTCGTTCTGGTATTTCCTTTGTTGTAAGTGATGTCAGCCAGTTTATGCAGGCTCCCTATGAGGAACACATGGAAGCTATCAAAAGAATTCTGAGATACTTAAAAACAACACCTGGTAAAGGGTTGATGTTTAGAAAGACAGATAAAAAGACCATTGAGGCATATACTGACTCGGATCGGGTAAGATCTGTTGTTGACAGAAAGTCTACCTCCAGTTATTGTACTTTGTTTGGGGCAATCTTGTAA

Protein sequence

MENPTEPCTNNTINENDRFDVAVLENVEEKNSGDENEVIIKTSNNEAEQGHTGKLDKHAPSLDLPIALRKGTRSCTKHSISNYVSYENLSPQFRAFTASLDSTTIPKDIHIALECPEWKNDVMEEMKALEKNNTWEICALPKGHKPVGCKWVFTLKYKADETLDRHKTRLVAKGFTQTYGVDYSKTFSPITKLNTVRVFLSVAVNKDWSLYQLDVKNAFLNEYLVKEIYMSPPPGFEAQFGQQAEINQLKQRMCNEFEIKDLGNLTYFLGMEVARSKEDISMSQRKYTLDLLTETGMLGYRPADTPIEFNRKLGNSNDQVPVDKEQYQCLVGKLIYLSHTRSGISFVVSDVSQFMQAPYEEHMEAIKRILRYLKTTPGKGLMFRKTDKKTIEAYTDSDRVRSVVDRKSTSSYCTLFGAIL

Homology

[Close]

BLAST of Cmc01g0025891 vs. NCBI nr
Match: KAA0055189.1 (cysteine-rich RLK RECEPTOR-like protein kinase [Cucumis melo var. makuwa] >TYK25781.1 cysteine-rich RLK RECEPTOR-like protein kinase [Cucumis melo var. makuwa])

HSP 1 Score: 827.8 bits (2137), Expect = 4.2e-236
Identity = 416/454 (91.63%), Postives = 418/454 (92.07%), Query Frame = 0


Query: 1   MENPTEPCTNNTINENDRFDVAVLENVEEKNSGDENEVIIKTSNNEAEQGHTGKLDKHAP 60
           MENPTEPCTNNTINENDRFDVAVLENVEEKNSGDENEVIIKTSNNEAEQGHTGKLDK+AP
Sbjct: 1   MENPTEPCTNNTINENDRFDVAVLENVEEKNSGDENEVIIKTSNNEAEQGHTGKLDKYAP 60

Query: 61  SLDLPIALRKGTRSCTKHSISNYVSYENLSPQFRAFTASLDSTTIPKDIHIALECPEWKN 120
           SLDLPIALRKGTRSCTKHSISNYVSYENLSPQFRAFTASLDSTTIPKDIHIALECPEWKN
Sbjct: 61  SLDLPIALRKGTRSCTKHSISNYVSYENLSPQFRAFTASLDSTTIPKDIHIALECPEWKN 120

Query: 121 DVMEEMKALEKNNTWEICALPKGHKPVGCKWVFTLKYKADETLDRHKTRLVAKGFTQTYG 180
           DVMEEMKALEKNNTWEICALPKGHKPVGCKWVFTLKYK DETLDRHKTRLVAKGFTQTYG
Sbjct: 121 DVMEEMKALEKNNTWEICALPKGHKPVGCKWVFTLKYKVDETLDRHKTRLVAKGFTQTYG 180

Query: 181 VDYSKTFSPITKLNTVRVFLSVAVNKDWSLYQLDVKNAFLNEYLVKEIYMSPPPGFEAQF 240
           VDYSKTFSPITKLNTVRVFLSVAVNKDWSLYQLDVKNAFLNEYLVKE+YMSPPPGFEAQF
Sbjct: 181 VDYSKTFSPITKLNTVRVFLSVAVNKDWSLYQLDVKNAFLNEYLVKEVYMSPPPGFEAQF 240

Query: 241 GQ----------------------------------QAEINQLKQRMCNEFEIKDLGNLT 300
           GQ                                  QAEINQLKQRMCNEFEIKDLGNLT
Sbjct: 241 GQQIYYFCQVPRIQSRTGKIAVLIVYVDDIILSGDDQAEINQLKQRMCNEFEIKDLGNLT 300

Query: 301 YFLGMEVARSKEDISMSQRKYTLDLLTETGMLGYRPADTPIEFNRKLGNSNDQVPVDKEQ 360
           YFLGMEVARSKEDISMSQRKYTLDLLTETGMLGYRPADTPIEFN KLGNSNDQVPVDKEQ
Sbjct: 301 YFLGMEVARSKEDISMSQRKYTLDLLTETGMLGYRPADTPIEFNHKLGNSNDQVPVDKEQ 360

Query: 361 YQCLVGKLIYLSHTRSGISFVVSDVSQFMQAPYEEHMEAIKRILRYLKTTPGKGLMFRKT 420
           YQCLVGKLIYLSHTRSGISFVVSDVSQFMQAPYEEHMEAIKRILRYLKTTPGKGLMFRKT
Sbjct: 361 YQCLVGKLIYLSHTRSGISFVVSDVSQFMQAPYEEHMEAIKRILRYLKTTPGKGLMFRKT 420

[Close]

BLAST of Cmc01g0025891 vs. NCBI nr
Match: KAA0042053.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 684.9 bits (1766), Expect = 4.4e-193
Identity = 342/438 (78.08%), Postives = 375/438 (85.62%), Query Frame = 0


Query: 1   MENPTEPCTNNTINENDRFDVAVLENVEEKNSGDENEVIIKTSNNEAEQGHTGKLDKHAP 60
           MENPT+PCTNNT++END+ DVA+LEN+EEKN  DE EV I+TSN+EAEQGHT KLD++ P
Sbjct: 485 MENPTKPCTNNTMSENDKSDVAILENMEEKNRDDETEVRIETSNDEAEQGHTRKLDEYDP 544

Query: 61  SLDLPIALRKGTRSCTKHSISNYVSYENLSPQFRAFTASLDSTTIPKDIHIALECPEWKN 120
           S D+PIALRKGT+SCTKH I NYVSY+NLSPQFRA TASLDST IPK+I+ ALECPEWKN
Sbjct: 545 SFDIPIALRKGTKSCTKHPICNYVSYDNLSPQFRALTASLDSTIIPKNIYTALECPEWKN 604

Query: 121 DVMEEMKALEKNNTWEICALPKGHKPVGCKWVFTLKYKADETLDRHKTRLVAKGFTQTYG 180
            VMEEMKALEKN TWEICALPKGHK VGCKWVF+LKYKAD TLDRHK RLVAKGFTQTYG
Sbjct: 605 AVMEEMKALEKNRTWEICALPKGHKTVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYG 664

Query: 181 VDYSKTFSPITKLNTVRVFLSVAVNKDWSLYQLDVKNAFLNEYLVKEIYMSPPPGFEAQF 240
           +DYS+TFSP+ KLNTVRV LSVAVNKDW LYQLDVKNAFLN  L++E+YMSPPPGFEAQF
Sbjct: 665 IDYSETFSPVAKLNTVRVLLSVAVNKDWPLYQLDVKNAFLNGDLMEEVYMSPPPGFEAQF 724

Query: 241 GQQA------------------------EINQLKQRMCNEFEIKDLGNLTYFLGMEVARS 300
           GQQA                        EI+QLKQRM +EFEIKDLGNL YFLGMEVARS
Sbjct: 725 GQQASKTGKIAILIVYVDDIVLTGDDQTEISQLKQRMGDEFEIKDLGNLKYFLGMEVARS 784

Query: 301 KEDISMSQRKYTLDLLTETGMLGYRPADTPIEFNRKLGNSNDQVPVDKEQYQCLVGKLIY 360
           KE IS+SQRKYTLDLLTETGMLG RPADTPIEFN KLGNS+DQVP+DKEQYQ LVGKLIY
Sbjct: 785 KEGISVSQRKYTLDLLTETGMLGCRPADTPIEFNCKLGNSDDQVPIDKEQYQRLVGKLIY 844

Query: 361 LSHTRSGISFVVSDVSQFMQAPYEEHMEAIKRILRYLKTTPGKGLMFRKTDKKTIEAYTD 415
           LSHTR  ISF VS VSQFMQAPYE+HMEA+ +ILRYLK TPGKGLMFRKT++KTIEAYTD
Sbjct: 845 LSHTRPDISFAVSVVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD 904

[Close]

BLAST of Cmc01g0025891 vs. NCBI nr
Match: TYK23097.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 679.1 bits (1751), Expect = 2.4e-191
Identity = 355/481 (73.80%), Postives = 377/481 (78.38%), Query Frame = 0


Query: 1    MENPTEPCTNNTINENDRFDVAVLENVEEKNSGDENEVIIKTSNNEAEQGHTGKLDKHAP 60
            MENPTEPCTNNT++END+ D AVLEN+EEKN GD+ EV I+TSN+EAEQGHT K D++ P
Sbjct: 1142 MENPTEPCTNNTMSENDKSDAAVLENMEEKNHGDKTEVRIETSNDEAEQGHTRKHDEYDP 1201

Query: 61   SLDLPIALRKGTRSCTKHSISNYVSYENLSPQFRAFTASLDSTTIPKDIHIALECPEWKN 120
            SLDLPIALRKGTRSCTKHSISNYVSYENLSPQFRAFTA LDSTTIP+ I+IALECPEWKN
Sbjct: 1202 SLDLPIALRKGTRSCTKHSISNYVSYENLSPQFRAFTAGLDSTTIPRIIYIALECPEWKN 1261

Query: 121  DVMEEMKALEKNNTWEICALPKGHKPVGCKWVFTLKYKADETLDRHKTRLVAKGFTQTYG 180
             VMEEMKALEKNN  EICALPKGHKPVGCKWVFTLKYKAD TLDRHKTRLVAKGFTQTYG
Sbjct: 1262 AVMEEMKALEKNNIGEICALPKGHKPVGCKWVFTLKYKADGTLDRHKTRLVAKGFTQTYG 1321

Query: 181  VDYSKTFSPITKLNTVRVFLSVAVNKDWSLYQLDVKNAFLNEYLVKEIYMSPPPGFEAQF 240
            VDYS+TFSP+ KLN VRV LSVAVNKDW LYQLD+KNAFLN  LV+E+YMSPPPGFEAQF
Sbjct: 1322 VDYSETFSPVAKLNIVRVLLSVAVNKDWPLYQLDIKNAFLNGDLVEEVYMSPPPGFEAQF 1381

Query: 241  GQ---------------------------------------------------------- 300
            GQ                                                          
Sbjct: 1382 GQQVCKLQKSLYGLKQSPRAWFDRFTTFVKSQGYSQGHSDHTLFTKVSETGKIAVLIVYV 1441

Query: 301  ---------QAEINQLKQRMCNEFEIKDLGNLTYFLGMEVARSKEDISMSQRKYTLDLLT 360
                     QAEI+QLKQR+ NEFEI+DLGNL YFLGMEVARSKE IS+SQRKYTLDLLT
Sbjct: 1442 DDIVLSGDDQAEISQLKQRIGNEFEIEDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLT 1501

Query: 361  ETGMLGYRPADTPIEFNRKLGNSNDQVPVDKEQYQCLVGKLIYLSHTRSGISFVVSDVSQ 415
            ETGMLG   ADTPIEFN KLGNS+DQVPVDKEQYQ LVGKLIYLSHT   ISF VS VSQ
Sbjct: 1502 ETGMLGCCLADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTHPDISFAVSAVSQ 1561

[Close]

BLAST of Cmc01g0025891 vs. NCBI nr
Match: KAA0025138.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 678.7 bits (1750), Expect = 3.2e-191
Identity = 354/481 (73.60%), Postives = 377/481 (78.38%), Query Frame = 0


Query: 1    MENPTEPCTNNTINENDRFDVAVLENVEEKNSGDENEVIIKTSNNEAEQGHTGKLDKHAP 60
            MENPTEPCTNNT++END+ D AVLEN+EEKN GD+ EV I+TSN+EAEQGHT K D++ P
Sbjct: 1125 MENPTEPCTNNTMSENDKSDAAVLENMEEKNHGDKTEVRIETSNDEAEQGHTRKHDEYDP 1184

Query: 61   SLDLPIALRKGTRSCTKHSISNYVSYENLSPQFRAFTASLDSTTIPKDIHIALECPEWKN 120
            SLDLPIALRKGTRSCTKHSISNYVSYENLSPQFRAFTA LDSTTIP+ I+IALECPEWKN
Sbjct: 1185 SLDLPIALRKGTRSCTKHSISNYVSYENLSPQFRAFTAGLDSTTIPRIIYIALECPEWKN 1244

Query: 121  DVMEEMKALEKNNTWEICALPKGHKPVGCKWVFTLKYKADETLDRHKTRLVAKGFTQTYG 180
             VMEEMKALEKNN  EICALPKGHKPVGCKWVFTLKYKAD TLDRHKTRLVAKGFTQTYG
Sbjct: 1245 AVMEEMKALEKNNIGEICALPKGHKPVGCKWVFTLKYKADGTLDRHKTRLVAKGFTQTYG 1304

Query: 181  VDYSKTFSPITKLNTVRVFLSVAVNKDWSLYQLDVKNAFLNEYLVKEIYMSPPPGFEAQF 240
            VDYS+TFSP+ KLN VRV LSVAVNKDW LYQLD+KNAFLN  LV+E+YMSPPPGFEAQF
Sbjct: 1305 VDYSETFSPVAKLNIVRVLLSVAVNKDWPLYQLDIKNAFLNGDLVEEVYMSPPPGFEAQF 1364

Query: 241  GQ---------------------------------------------------------- 300
            GQ                                                          
Sbjct: 1365 GQQVCKLQKSLYGLKQSPRAWFDRFTTFVKSQGYSQGHSDHTLFTKVSETGKIAVLIVYV 1424

Query: 301  ---------QAEINQLKQRMCNEFEIKDLGNLTYFLGMEVARSKEDISMSQRKYTLDLLT 360
                     QAEI+QLKQR+ NEFEI+DLGNL YFLGMEVARSKE IS+SQRKYTLDLLT
Sbjct: 1425 DDIVLSGDDQAEISQLKQRIGNEFEIEDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLT 1484

Query: 361  ETGMLGYRPADTPIEFNRKLGNSNDQVPVDKEQYQCLVGKLIYLSHTRSGISFVVSDVSQ 415
            ETGMLG   ADTPIEFN KLGNS+DQVPVDKEQYQ LVGKLIYLSHT   ISF VS VSQ
Sbjct: 1485 ETGMLGCCLADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTHPDISFAVSAVSQ 1544

[Close]

BLAST of Cmc01g0025891 vs. NCBI nr
Match: KAA0031941.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 673.3 bits (1736), Expect = 1.3e-189
Identity = 346/481 (71.93%), Postives = 376/481 (78.17%), Query Frame = 0


Query: 1    MENPTEPCTNNTINENDRFDVAVLENVEEKNSGDENEVIIKTSNNEAEQGHTGKLDKHAP 60
            MENPT+PCTNNT++END+ D+AVLEN+EEKN  DE EV I+TSN+EAEQGHT KLD++ P
Sbjct: 964  MENPTKPCTNNTMSENDKSDIAVLENMEEKNCDDETEVRIETSNDEAEQGHTRKLDEYDP 1023

Query: 61   SLDLPIALRKGTRSCTKHSISNYVSYENLSPQFRAFTASLDSTTIPKDIHIALECPEWKN 120
            SLD+PIALRKGTRSCTKH I NYVSY+NLSPQFRAFTA+LDST IPK+I+ ALECPEWKN
Sbjct: 1024 SLDIPIALRKGTRSCTKHPICNYVSYDNLSPQFRAFTANLDSTIIPKNIYTALECPEWKN 1083

Query: 121  DVMEEMKALEKNNTWEICALPKGHKPVGCKWVFTLKYKADETLDRHKTRLVAKGFTQTYG 180
             VMEEMKALEKN TWEICALPKGHK VGCKWVF+LKYKAD TLDRHK RLVAKGFTQTYG
Sbjct: 1084 AVMEEMKALEKNRTWEICALPKGHKTVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYG 1143

Query: 181  VDYSKTFSPITKLNTVRVFLSVAVNKDWSLYQLDVKNAFLNEYLVKEIYMSPPPGFEAQF 240
            +DYS+TFSP+ KLNTVRV LSVAVNKDW LYQLDVKNAFLN  LV+E+YMSPPPGFEAQF
Sbjct: 1144 IDYSETFSPVAKLNTVRVLLSVAVNKDWPLYQLDVKNAFLNGDLVEEVYMSPPPGFEAQF 1203

Query: 241  GQ---------------------------------------------------------- 300
            GQ                                                          
Sbjct: 1204 GQEVCKLQKSLYGLKQSPRAWFDRFTTFVKSQGYSQGHSDHTLFTKASKTGKIAILIVYV 1263

Query: 301  ---------QAEINQLKQRMCNEFEIKDLGNLTYFLGMEVARSKEDISMSQRKYTLDLLT 360
                     Q EI+QLKQRM +EFEIKDLGNL YFLGMEVARSKE IS+SQRKYTLDLLT
Sbjct: 1264 DDIVLTGDDQTEISQLKQRMGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLT 1323

Query: 361  ETGMLGYRPADTPIEFNRKLGNSNDQVPVDKEQYQCLVGKLIYLSHTRSGISFVVSDVSQ 415
            ETGMLG RPADTPIEFN KLGNS+DQVPVDKEQYQ LVGKLIYLSHTR  ISF VS VSQ
Sbjct: 1324 ETGMLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQ 1383

[Close]

BLAST of Cmc01g0025891 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.0e-58
Identity = 133/391 (34.02%), Postives = 197/391 (50.38%), Query Frame = 0


Query: 95   AFTASLDSTTIPKDIHIALECPEWKNDVMEEMKALEKNNTWEICALPKGHKP-VGCKWVF 154
            +   SL + + P+    AL+   W+N +  E+ A   N+TW++   P  H   VGC+W+F
Sbjct: 945  SLAVSLAAESEPRTAIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIF 1004

Query: 155  TLKYKADETLDRHKTRLVAKGFTQTYGVDYSKTFSPITKLNTVRVFLSVAVNKDWSLYQL 214
            T KY +D +L+R+K RLVAKG+ Q  G+DY++TFSP+ K  ++R+ L VAV++ W + QL
Sbjct: 1005 TKKYNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQL 1064

Query: 215  DVKNAFLNEYLVKEIYMSPPPGF-------------EAQFG-QQAE-------------- 274
            DV NAFL   L  ++YMS PPGF             +A +G +QA               
Sbjct: 1065 DVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTI 1124

Query: 275  ---------------------------------------INQLKQRMCNEFEIKDLGNLT 334
                                                   ++     +   F +KD   L 
Sbjct: 1125 GFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELH 1184

Query: 335  YFLGMEVARSKEDISMSQRKYTLDLLTETGMLGYRPADTPIEFNRKLGNSNDQVPVDKEQ 394
            YFLG+E  R    + +SQR+Y LDLL  T M+  +P  TP+  + KL   +     D  +
Sbjct: 1185 YFLGIEAKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTE 1244

Query: 395  YQCLVGKLIYLSHTRSGISFVVSDVSQFMQAPYEEHMEAIKRILRYLKTTPGKGLMFRKT 418
            Y+ +VG L YL+ TR  IS+ V+ +SQFM  P EEH++A+KRILRYL  TP  G+  +K 
Sbjct: 1245 YRGIVGSLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKG 1304

[Close]

BLAST of Cmc01g0025891 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 2.6e-55
Identity = 129/392 (32.91%), Postives = 202/392 (51.53%), Query Frame = 0


Query: 95   AFTASLDSTTIPKDIHIALECPEWKNDVMEEMKALEKNNTWEICALPKGHKP-VGCKWVF 154
            ++  SL + + P+    A++   W+  +  E+ A   N+TW++   P      VGC+W+F
Sbjct: 928  SYATSLAANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIF 987

Query: 155  TLKYKADETLDRHKTRLVAKGFTQTYGVDYSKTFSPITKLNTVRVFLSVAVNKDWSLYQL 214
            T K+ +D +L+R+K RLVAKG+ Q  G+DY++TFSP+ K  ++R+ L VAV++ W + QL
Sbjct: 988  TKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQL 1047

Query: 215  DVKNAFLNEYLVKEIYMSPPPGF-------------EAQFG-QQAE-------------- 274
            DV NAFL   L  E+YMS PPGF             +A +G +QA               
Sbjct: 1048 DVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTV 1107

Query: 275  --INQLK-------------------------------------QRMCNEFEIKDLGNLT 334
              +N +                                        +   F +K+  +L 
Sbjct: 1108 GFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLH 1167

Query: 335  YFLGMEVARSKEDISMSQRKYTLDLLTETGMLGYRPADTPIEFNRKLG-NSNDQVPVDKE 394
            YFLG+E  R  + + +SQR+YTLDLL  T ML  +P  TP+  + KL  +S  ++P D  
Sbjct: 1168 YFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLP-DPT 1227

Query: 395  QYQCLVGKLIYLSHTRSGISFVVSDVSQFMQAPYEEHMEAIKRILRYLKTTPGKGLMFRK 418
            +Y+ +VG L YL+ TR  +S+ V+ +SQ+M  P ++H  A+KR+LRYL  TP  G+  +K
Sbjct: 1228 EYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKK 1287

[Close]

BLAST of Cmc01g0025891 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 6.5e-46
Identity = 132/397 (33.25%), Postives = 189/397 (47.61%), Query Frame = 0


Query: 106  PKDIHIALECPEWKNDVM----EEMKALEKNNTWEICALPKGHKPVGCKWVFTLKYKADE 165
            P+ +   L  PE KN +M    EEM++L+KN T+++  LPKG +P+ CKWVF LK   D 
Sbjct: 811  PESLKEVLSHPE-KNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDC 870

Query: 166  TLDRHKTRLVAKGFTQTYGVDYSKTFSPITKLNTVRVFLSVAVNKDWSLYQLDVKNAFLN 225
             L R+K RLV KGF Q  G+D+ + FSP+ K+ ++R  LS+A + D  + QLDVK AFL+
Sbjct: 871  KLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLH 930

Query: 226  EYLVKEIYMSPPPGFE-------------------------------------------- 285
              L +EIYM  P GFE                                            
Sbjct: 931  GDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSD 990

Query: 286  --AQFGQQAEIN----------------------QLKQRMCNEFEIKDLGNLTYFLGMEV 345
                F + +E N                      +LK  +   F++KDLG     LGM++
Sbjct: 991  PCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKI 1050

Query: 346  ARSK--EDISMSQRKYTLDLLTETGMLGYRPADTPIEFNRKLGNSNDQVPVD------KE 405
             R +    + +SQ KY   +L    M   +P  TP+  + KL        V+      K 
Sbjct: 1051 VRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKV 1110

Query: 406  QYQCLVGKLIY-LSHTRSGISFVVSDVSQFMQAPYEEHMEAIKRILRYLKTTPGKGLMFR 420
             Y   VG L+Y +  TR  I+  V  VS+F++ P +EH EA+K ILRYL+ T G  L F 
Sbjct: 1111 PYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFG 1170

[Close]

BLAST of Cmc01g0025891 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 156.4 bits (394), Expect = 7.2e-37
Identity = 124/458 (27.07%), Postives = 199/458 (43.45%), Query Frame = 0


Query: 28   EEKNSGDENEVIIKTSNNEAEQGHTGKLDKHAPSLDLPIALRKGTRSCTKHSISNYVSYE 87
            E K SG+ NE      +  AE      +D    +  + I  R+  R  TK  IS      
Sbjct: 818  ESKGSGNPNE---SRESETAEHLKEIGIDNPTKNDGIEIINRRSERLKTKPQISYNEEDN 877

Query: 88   NLSP-QFRAFTASLDSTTIPKDIHIALECPEWKNDVMEEMKALEKNNTWEICALPKGHKP 147
            +L+     A T   D      +I    +   W+  +  E+ A + NNTW I   P+    
Sbjct: 878  SLNKVVLNAHTIFNDVPNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTITKRPENKNI 937

Query: 148  VGCKWVFTLKYKADETLDRHKTRLVAKGFTQTYGVDYSKTFSPITKLNTVRVFLSVAVNK 207
            V  +WVF++KY       R+K RLVA+GFTQ Y +DY +TF+P+ ++++ R  LS+ +  
Sbjct: 938  VDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQY 997

Query: 208  DWSLYQLDVKNAFLNEYLVKEIYMSPPPGF------------------------------ 267
            +  ++Q+DVK AFLN  L +EIYM  P G                               
Sbjct: 998  NLKVHQMDVKTAFLNGTLKEEIYMRLPQGISCNSDNVCKLNKAIYGLKQAARCWFEVFEQ 1057

Query: 268  ---EAQF----------------------------------GQQAEINQLKQRMCNEFEI 327
               E +F                                  G    +N  K+ +  +F +
Sbjct: 1058 ALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRM 1117

Query: 328  KDLGNLTYFLGMEVARSKEDISMSQRKYTLDLLTETGMLGYRPADTPI--EFNRKLGNSN 387
             DL  + +F+G+ +   ++ I +SQ  Y   +L++  M       TP+  + N +L NS+
Sbjct: 1118 TDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNSD 1177

Query: 388  DQVPVDKEQYQCLVGKLIYLS-HTRSGISFVVSDVSQFMQAPYEEHMEAIKRILRYLKTT 413
            +         + L+G L+Y+   TR  ++  V+ +S++      E  + +KR+LRYLK T
Sbjct: 1178 EDC---NTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGT 1237

[Close]

BLAST of Cmc01g0025891 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 2.7e-23
Identity = 60/172 (34.88%), Postives = 91/172 (52.91%), Query Frame = 0


Query: 246 INQLKQRMCNEFEIKDLGNLTYFLGMEVARSKEDISMSQRKYTLDLLTETGMLGYRPADT 305
           +N L  ++ + F +KDLG + YFLG+++      + +SQ KY   +L   GML  +P  T
Sbjct: 20  LNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNAGMLDCKPMST 79

Query: 306 PIEFNRKLGNSNDQVPVDKEQYQCLVGKLIYLSHTRSGISFVVSDVSQFMQAPYEEHMEA 365
           P+        S  + P D   ++ +VG L YL+ TR  IS+ V+ V Q M  P     + 
Sbjct: 80  PLPLKLNSSVSTAKYP-DPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDL 139

Query: 366 IKRILRYLKTTPGKGLMFRKTDKKTIEAYTDSDRVRSVVDRKSTSSYCTLFG 418
           +KR+LRY+K T   GL   K  K  ++A+ DSD       R+ST+ +CT  G
Sbjct: 140 LKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLG 190

[Close]

BLAST of Cmc01g0025891 vs. ExPASy TrEMBL
Match: A0A5D3DQ22 (Cysteine-rich RLK RECEPTOR-like protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold640G00220 PE=4 SV=1)

HSP 1 Score: 827.8 bits (2137), Expect = 2.1e-236
Identity = 416/454 (91.63%), Postives = 418/454 (92.07%), Query Frame = 0


Query: 1   MENPTEPCTNNTINENDRFDVAVLENVEEKNSGDENEVIIKTSNNEAEQGHTGKLDKHAP 60
           MENPTEPCTNNTINENDRFDVAVLENVEEKNSGDENEVIIKTSNNEAEQGHTGKLDK+AP
Sbjct: 1   MENPTEPCTNNTINENDRFDVAVLENVEEKNSGDENEVIIKTSNNEAEQGHTGKLDKYAP 60

Query: 61  SLDLPIALRKGTRSCTKHSISNYVSYENLSPQFRAFTASLDSTTIPKDIHIALECPEWKN 120
           SLDLPIALRKGTRSCTKHSISNYVSYENLSPQFRAFTASLDSTTIPKDIHIALECPEWKN
Sbjct: 61  SLDLPIALRKGTRSCTKHSISNYVSYENLSPQFRAFTASLDSTTIPKDIHIALECPEWKN 120

Query: 121 DVMEEMKALEKNNTWEICALPKGHKPVGCKWVFTLKYKADETLDRHKTRLVAKGFTQTYG 180
           DVMEEMKALEKNNTWEICALPKGHKPVGCKWVFTLKYK DETLDRHKTRLVAKGFTQTYG
Sbjct: 121 DVMEEMKALEKNNTWEICALPKGHKPVGCKWVFTLKYKVDETLDRHKTRLVAKGFTQTYG 180

Query: 181 VDYSKTFSPITKLNTVRVFLSVAVNKDWSLYQLDVKNAFLNEYLVKEIYMSPPPGFEAQF 240
           VDYSKTFSPITKLNTVRVFLSVAVNKDWSLYQLDVKNAFLNEYLVKE+YMSPPPGFEAQF
Sbjct: 181 VDYSKTFSPITKLNTVRVFLSVAVNKDWSLYQLDVKNAFLNEYLVKEVYMSPPPGFEAQF 240

Query: 241 GQ----------------------------------QAEINQLKQRMCNEFEIKDLGNLT 300
           GQ                                  QAEINQLKQRMCNEFEIKDLGNLT
Sbjct: 241 GQQIYYFCQVPRIQSRTGKIAVLIVYVDDIILSGDDQAEINQLKQRMCNEFEIKDLGNLT 300

Query: 301 YFLGMEVARSKEDISMSQRKYTLDLLTETGMLGYRPADTPIEFNRKLGNSNDQVPVDKEQ 360
           YFLGMEVARSKEDISMSQRKYTLDLLTETGMLGYRPADTPIEFN KLGNSNDQVPVDKEQ
Sbjct: 301 YFLGMEVARSKEDISMSQRKYTLDLLTETGMLGYRPADTPIEFNHKLGNSNDQVPVDKEQ 360

Query: 361 YQCLVGKLIYLSHTRSGISFVVSDVSQFMQAPYEEHMEAIKRILRYLKTTPGKGLMFRKT 420
           YQCLVGKLIYLSHTRSGISFVVSDVSQFMQAPYEEHMEAIKRILRYLKTTPGKGLMFRKT
Sbjct: 361 YQCLVGKLIYLSHTRSGISFVVSDVSQFMQAPYEEHMEAIKRILRYLKTTPGKGLMFRKT 420

[Close]

BLAST of Cmc01g0025891 vs. ExPASy TrEMBL
Match: A0A5A7TFR5 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G005100 PE=4 SV=1)

HSP 1 Score: 684.9 bits (1766), Expect = 2.2e-193
Identity = 342/438 (78.08%), Postives = 375/438 (85.62%), Query Frame = 0


Query: 1   MENPTEPCTNNTINENDRFDVAVLENVEEKNSGDENEVIIKTSNNEAEQGHTGKLDKHAP 60
           MENPT+PCTNNT++END+ DVA+LEN+EEKN  DE EV I+TSN+EAEQGHT KLD++ P
Sbjct: 485 MENPTKPCTNNTMSENDKSDVAILENMEEKNRDDETEVRIETSNDEAEQGHTRKLDEYDP 544

Query: 61  SLDLPIALRKGTRSCTKHSISNYVSYENLSPQFRAFTASLDSTTIPKDIHIALECPEWKN 120
           S D+PIALRKGT+SCTKH I NYVSY+NLSPQFRA TASLDST IPK+I+ ALECPEWKN
Sbjct: 545 SFDIPIALRKGTKSCTKHPICNYVSYDNLSPQFRALTASLDSTIIPKNIYTALECPEWKN 604

Query: 121 DVMEEMKALEKNNTWEICALPKGHKPVGCKWVFTLKYKADETLDRHKTRLVAKGFTQTYG 180
            VMEEMKALEKN TWEICALPKGHK VGCKWVF+LKYKAD TLDRHK RLVAKGFTQTYG
Sbjct: 605 AVMEEMKALEKNRTWEICALPKGHKTVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYG 664

Query: 181 VDYSKTFSPITKLNTVRVFLSVAVNKDWSLYQLDVKNAFLNEYLVKEIYMSPPPGFEAQF 240
           +DYS+TFSP+ KLNTVRV LSVAVNKDW LYQLDVKNAFLN  L++E+YMSPPPGFEAQF
Sbjct: 665 IDYSETFSPVAKLNTVRVLLSVAVNKDWPLYQLDVKNAFLNGDLMEEVYMSPPPGFEAQF 724

Query: 241 GQQA------------------------EINQLKQRMCNEFEIKDLGNLTYFLGMEVARS 300
           GQQA                        EI+QLKQRM +EFEIKDLGNL YFLGMEVARS
Sbjct: 725 GQQASKTGKIAILIVYVDDIVLTGDDQTEISQLKQRMGDEFEIKDLGNLKYFLGMEVARS 784

Query: 301 KEDISMSQRKYTLDLLTETGMLGYRPADTPIEFNRKLGNSNDQVPVDKEQYQCLVGKLIY 360
           KE IS+SQRKYTLDLLTETGMLG RPADTPIEFN KLGNS+DQVP+DKEQYQ LVGKLIY
Sbjct: 785 KEGISVSQRKYTLDLLTETGMLGCRPADTPIEFNCKLGNSDDQVPIDKEQYQRLVGKLIY 844

Query: 361 LSHTRSGISFVVSDVSQFMQAPYEEHMEAIKRILRYLKTTPGKGLMFRKTDKKTIEAYTD 415
           LSHTR  ISF VS VSQFMQAPYE+HMEA+ +ILRYLK TPGKGLMFRKT++KTIEAYTD
Sbjct: 845 LSHTRPDISFAVSVVSQFMQAPYEKHMEAVNKILRYLKNTPGKGLMFRKTNRKTIEAYTD 904

[Close]

BLAST of Cmc01g0025891 vs. ExPASy TrEMBL
Match: A0A5D3DHC0 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G00790 PE=3 SV=1)

HSP 1 Score: 679.1 bits (1751), Expect = 1.2e-191
Identity = 355/481 (73.80%), Postives = 377/481 (78.38%), Query Frame = 0


Query: 1    MENPTEPCTNNTINENDRFDVAVLENVEEKNSGDENEVIIKTSNNEAEQGHTGKLDKHAP 60
            MENPTEPCTNNT++END+ D AVLEN+EEKN GD+ EV I+TSN+EAEQGHT K D++ P
Sbjct: 1142 MENPTEPCTNNTMSENDKSDAAVLENMEEKNHGDKTEVRIETSNDEAEQGHTRKHDEYDP 1201

Query: 61   SLDLPIALRKGTRSCTKHSISNYVSYENLSPQFRAFTASLDSTTIPKDIHIALECPEWKN 120
            SLDLPIALRKGTRSCTKHSISNYVSYENLSPQFRAFTA LDSTTIP+ I+IALECPEWKN
Sbjct: 1202 SLDLPIALRKGTRSCTKHSISNYVSYENLSPQFRAFTAGLDSTTIPRIIYIALECPEWKN 1261

Query: 121  DVMEEMKALEKNNTWEICALPKGHKPVGCKWVFTLKYKADETLDRHKTRLVAKGFTQTYG 180
             VMEEMKALEKNN  EICALPKGHKPVGCKWVFTLKYKAD TLDRHKTRLVAKGFTQTYG
Sbjct: 1262 AVMEEMKALEKNNIGEICALPKGHKPVGCKWVFTLKYKADGTLDRHKTRLVAKGFTQTYG 1321

Query: 181  VDYSKTFSPITKLNTVRVFLSVAVNKDWSLYQLDVKNAFLNEYLVKEIYMSPPPGFEAQF 240
            VDYS+TFSP+ KLN VRV LSVAVNKDW LYQLD+KNAFLN  LV+E+YMSPPPGFEAQF
Sbjct: 1322 VDYSETFSPVAKLNIVRVLLSVAVNKDWPLYQLDIKNAFLNGDLVEEVYMSPPPGFEAQF 1381

Query: 241  GQ---------------------------------------------------------- 300
            GQ                                                          
Sbjct: 1382 GQQVCKLQKSLYGLKQSPRAWFDRFTTFVKSQGYSQGHSDHTLFTKVSETGKIAVLIVYV 1441

Query: 301  ---------QAEINQLKQRMCNEFEIKDLGNLTYFLGMEVARSKEDISMSQRKYTLDLLT 360
                     QAEI+QLKQR+ NEFEI+DLGNL YFLGMEVARSKE IS+SQRKYTLDLLT
Sbjct: 1442 DDIVLSGDDQAEISQLKQRIGNEFEIEDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLT 1501

Query: 361  ETGMLGYRPADTPIEFNRKLGNSNDQVPVDKEQYQCLVGKLIYLSHTRSGISFVVSDVSQ 415
            ETGMLG   ADTPIEFN KLGNS+DQVPVDKEQYQ LVGKLIYLSHT   ISF VS VSQ
Sbjct: 1502 ETGMLGCCLADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTHPDISFAVSAVSQ 1561

[Close]

BLAST of Cmc01g0025891 vs. ExPASy TrEMBL
Match: A0A5A7SG80 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold124G00380 PE=3 SV=1)

HSP 1 Score: 678.7 bits (1750), Expect = 1.5e-191
Identity = 354/481 (73.60%), Postives = 377/481 (78.38%), Query Frame = 0


Query: 1    MENPTEPCTNNTINENDRFDVAVLENVEEKNSGDENEVIIKTSNNEAEQGHTGKLDKHAP 60
            MENPTEPCTNNT++END+ D AVLEN+EEKN GD+ EV I+TSN+EAEQGHT K D++ P
Sbjct: 1125 MENPTEPCTNNTMSENDKSDAAVLENMEEKNHGDKTEVRIETSNDEAEQGHTRKHDEYDP 1184

Query: 61   SLDLPIALRKGTRSCTKHSISNYVSYENLSPQFRAFTASLDSTTIPKDIHIALECPEWKN 120
            SLDLPIALRKGTRSCTKHSISNYVSYENLSPQFRAFTA LDSTTIP+ I+IALECPEWKN
Sbjct: 1185 SLDLPIALRKGTRSCTKHSISNYVSYENLSPQFRAFTAGLDSTTIPRIIYIALECPEWKN 1244

Query: 121  DVMEEMKALEKNNTWEICALPKGHKPVGCKWVFTLKYKADETLDRHKTRLVAKGFTQTYG 180
             VMEEMKALEKNN  EICALPKGHKPVGCKWVFTLKYKAD TLDRHKTRLVAKGFTQTYG
Sbjct: 1245 AVMEEMKALEKNNIGEICALPKGHKPVGCKWVFTLKYKADGTLDRHKTRLVAKGFTQTYG 1304

Query: 181  VDYSKTFSPITKLNTVRVFLSVAVNKDWSLYQLDVKNAFLNEYLVKEIYMSPPPGFEAQF 240
            VDYS+TFSP+ KLN VRV LSVAVNKDW LYQLD+KNAFLN  LV+E+YMSPPPGFEAQF
Sbjct: 1305 VDYSETFSPVAKLNIVRVLLSVAVNKDWPLYQLDIKNAFLNGDLVEEVYMSPPPGFEAQF 1364

Query: 241  GQ---------------------------------------------------------- 300
            GQ                                                          
Sbjct: 1365 GQQVCKLQKSLYGLKQSPRAWFDRFTTFVKSQGYSQGHSDHTLFTKVSETGKIAVLIVYV 1424

Query: 301  ---------QAEINQLKQRMCNEFEIKDLGNLTYFLGMEVARSKEDISMSQRKYTLDLLT 360
                     QAEI+QLKQR+ NEFEI+DLGNL YFLGMEVARSKE IS+SQRKYTLDLLT
Sbjct: 1425 DDIVLSGDDQAEISQLKQRIGNEFEIEDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLT 1484

Query: 361  ETGMLGYRPADTPIEFNRKLGNSNDQVPVDKEQYQCLVGKLIYLSHTRSGISFVVSDVSQ 415
            ETGMLG   ADTPIEFN KLGNS+DQVPVDKEQYQ LVGKLIYLSHT   ISF VS VSQ
Sbjct: 1485 ETGMLGCCLADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTHPDISFAVSAVSQ 1544

[Close]

BLAST of Cmc01g0025891 vs. ExPASy TrEMBL
Match: A0A5A7VLQ7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G00690 PE=4 SV=1)

HSP 1 Score: 673.3 bits (1736), Expect = 6.5e-190
Identity = 346/481 (71.93%), Postives = 376/481 (78.17%), Query Frame = 0


Query: 1    MENPTEPCTNNTINENDRFDVAVLENVEEKNSGDENEVIIKTSNNEAEQGHTGKLDKHAP 60
            MENPT+PCTNNT++END+ D+AVLEN+EEKN  DE EV I+TSN+EAEQGHT KLD++ P
Sbjct: 990  MENPTKPCTNNTMSENDKSDIAVLENMEEKNCDDETEVRIETSNDEAEQGHTRKLDEYDP 1049

Query: 61   SLDLPIALRKGTRSCTKHSISNYVSYENLSPQFRAFTASLDSTTIPKDIHIALECPEWKN 120
            SLD+PIALRKGTRSCTKH I NYVSY+NLSPQFRAFTA+LDST IPK+I+ ALECPEWKN
Sbjct: 1050 SLDIPIALRKGTRSCTKHPICNYVSYDNLSPQFRAFTANLDSTIIPKNIYTALECPEWKN 1109

Query: 121  DVMEEMKALEKNNTWEICALPKGHKPVGCKWVFTLKYKADETLDRHKTRLVAKGFTQTYG 180
             VMEEMKALEKN TWEICALPKGHK VGCKWVF+LKYKAD TLDRHK RLVAKGFTQTYG
Sbjct: 1110 AVMEEMKALEKNRTWEICALPKGHKTVGCKWVFSLKYKADGTLDRHKARLVAKGFTQTYG 1169

Query: 181  VDYSKTFSPITKLNTVRVFLSVAVNKDWSLYQLDVKNAFLNEYLVKEIYMSPPPGFEAQF 240
            +DYS+TFSP+ KLNTVRV LSVAVNKDW LYQLDVKNAFLN  LV+E+YMSPPPGFEAQF
Sbjct: 1170 IDYSETFSPVAKLNTVRVLLSVAVNKDWPLYQLDVKNAFLNGDLVEEVYMSPPPGFEAQF 1229

Query: 241  GQ---------------------------------------------------------- 300
            GQ                                                          
Sbjct: 1230 GQEVCKLQKSLYGLKQSPRAWFDRFTTFVKSQGYSQGHSDHTLFTKASKTGKIAILIVYV 1289

Query: 301  ---------QAEINQLKQRMCNEFEIKDLGNLTYFLGMEVARSKEDISMSQRKYTLDLLT 360
                     Q EI+QLKQRM +EFEIKDLGNL YFLGMEVARSKE IS+SQRKYTLDLLT
Sbjct: 1290 DDIVLTGDDQTEISQLKQRMGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLT 1349

Query: 361  ETGMLGYRPADTPIEFNRKLGNSNDQVPVDKEQYQCLVGKLIYLSHTRSGISFVVSDVSQ 415
            ETGMLG RPADTPIEFN KLGNS+DQVPVDKEQYQ LVGKLIYLSHTR  ISF VS VSQ
Sbjct: 1350 ETGMLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQ 1409

[Close]

BLAST of Cmc01g0025891 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 268.1 bits (684), Expect = 1.2e-71
Identity = 144/418 (34.45%), Postives = 224/418 (53.59%), Query Frame = 0


Query: 74  SCTKHSISNYVSYENLSPQFRAFTASLDSTTIPKDIHIALECPEWKNDVMEEMKALEKNN 133
           S T H IS ++SYE +SP + +F   +     P   + A E   W   + +E+ A+E  +
Sbjct: 54  SLTIHDISQFLSYEKVSPLYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTH 113

Query: 134 TWEICALPKGHKPVGCKWVFTLKYKADETLDRHKTRLVAKGFTQTYGVDYSKTFSPITKL 193
           TWEIC LP   KP+GCKWV+ +KY +D T++R+K RLVAKG+TQ  G+D+ +TFSP+ KL
Sbjct: 114 TWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKL 173

Query: 194 NTVRVFLSVAVNKDWSLYQLDVKNAFLNEYLVKEIYMSPPPGFEAQFG------------ 253
            +V++ L+++   +++L+QLD+ NAFLN  L +EIYM  PPG+ A+ G            
Sbjct: 174 TSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLK 233

Query: 254 -----------------------------------------------------------Q 313
                                                                       
Sbjct: 234 KSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNN 293

Query: 314 QAEINQLKQRMCNEFEIKDLGNLTYFLGMEVARSKEDISMSQRKYTLDLLTETGMLGYRP 373
            A +++LK ++ + F+++DLG L YFLG+E+ARS   I++ QRKY LDLL ETG+LG +P
Sbjct: 294 DAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKP 353

Query: 374 ADTPIEFNRKLGNSNDQVPVDKEQYQCLVGKLIYLSHTRSGISFVVSDVSQFMQAPYEEH 421
           +  P++ +      +    VD + Y+ L+G+L+YL  TR  ISF V+ +SQF +AP   H
Sbjct: 354 SSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAH 413

[Close]

BLAST of Cmc01g0025891 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 111.3 bits (277), Expect = 1.9e-24
Identity = 60/172 (34.88%), Postives = 91/172 (52.91%), Query Frame = 0


Query: 246 INQLKQRMCNEFEIKDLGNLTYFLGMEVARSKEDISMSQRKYTLDLLTETGMLGYRPADT 305
           +N L  ++ + F +KDLG + YFLG+++      + +SQ KY   +L   GML  +P  T
Sbjct: 20  LNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNAGMLDCKPMST 79

Query: 306 PIEFNRKLGNSNDQVPVDKEQYQCLVGKLIYLSHTRSGISFVVSDVSQFMQAPYEEHMEA 365
           P+        S  + P D   ++ +VG L YL+ TR  IS+ V+ V Q M  P     + 
Sbjct: 80  PLPLKLNSSVSTAKYP-DPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDL 139

Query: 366 IKRILRYLKTTPGKGLMFRKTDKKTIEAYTDSDRVRSVVDRKSTSSYCTLFG 418
           +KR+LRY+K T   GL   K  K  ++A+ DSD       R+ST+ +CT  G
Sbjct: 140 LKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLG 190

[Close]

BLAST of Cmc01g0025891 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 94.7 bits (234), Expect = 1.8e-19
Identity = 47/115 (40.87%), Postives = 68/115 (59.13%), Query Frame = 0


Query: 89  LSPQFRAFTASLDSTTIPKDIHIALECPEWKNDVMEEMKALEKNNTWEICALPKGHKPVG 148
           L+P++ + T +      PK +  AL+ P W   + EE+ AL +N TW +   P     +G
Sbjct: 12  LNPKY-SLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILG 71

Query: 149 CKWVFTLKYKADETLDRHKTRLVAKGFTQTYGVDYSKTFSPITKLNTVRVFLSVA 204
           CKWVF  K  +D TLDR K RLVAKGF Q  G+ + +T+SP+ +  T+R  L+VA
Sbjct: 72  CKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125

[Close]

BLAST of Cmc01g0025891 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 58.5 bits (140), Expect = 1.5e-08
Identity = 28/81 (34.57%), Postives = 48/81 (59.26%), Query Frame = 0


Query: 335 IYLSHTRSGISFVVSDVSQFMQAPYEEHMEAIKRILRYLKTTPGKGLMFRKTDKKTIEAY 394
           +YL+ TR  ++F V+ +SQF  A     M+A+ ++L Y+K T G+GL +  T    ++A+
Sbjct: 1   MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 395 TDSDRVRSVVDRKSTSSYCTL 416
            DSD       R+S + +C+L
Sbjct: 61  ADSDWASCPDTRRSVTGFCSL 81

The following BLAST results are available for this feature:

BLAST of Cmc01g0025891 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0055189.1	4.2e-236	91.63	cysteine-rich RLK RECEPTOR-like protein kinase [Cucumis melo var. makuwa] >TYK25...	[more]
KAA0042053.1	4.4e-193	78.08	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYK23097.1	2.4e-191	73.80	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0025138.1	3.2e-191	73.60	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0031941.1	1.3e-189	71.93	Beta-galactosidase [Cucumis melo var. makuwa]	[more]

BLAST of Cmc01g0025891 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	2.0e-58	34.02	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	2.6e-55	32.91	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P10978	6.5e-46	33.25	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	7.2e-37	27.07	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P92519	2.7e-23	34.88	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Cmc01g0025891 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DQ22	2.1e-236	91.63	Cysteine-rich RLK RECEPTOR-like protein kinase OS=Cucumis melo var. makuwa OX=11...	[more]
A0A5A7TFR5	2.2e-193	78.08	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3DHC0	1.2e-191	73.80	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7SG80	1.5e-191	73.60	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7VLQ7	6.5e-190	71.93	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G0...	[more]

BLAST of Cmc01g0025891 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	1.2e-71	34.45	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	1.9e-24	34.88	DNA/RNA polymerases superfamily protein	[more]
ATMG00820.1	1.8e-19	40.87	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]
ATMG00240.1	1.5e-08	34.57	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 243..307 e-value: 6.1E-8 score: 32.6 coord: 132..239 e-value: 7.5E-34 score: 117.4
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 106..241 coord: 250..395
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 131..398

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc01g0025891.1	Cmc01g0025891.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051641	cellular localization
biological_process	GO:0015074	DNA integration
biological_process	GO:0016310	phosphorylation
biological_process	GO:0006810	transport
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0016491	oxidoreductase activity