Cmc01g0025771 (gene) Melon (Charmono) v1.1

Overview
NameCmc01g0025771
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionGag-pol polyprotein
LocationCMiso1.1chr01: 26715916 .. 26716941 (-)
RNA-Seq ExpressionCmc01g0025771
SyntenyCmc01g0025771
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATAAGCTTAATAAAGCTTTATATGGCCTTAAGCAAGCTTCTAGAGCTTGGTACAAACGATTAACAATTTATTTAAGTTGTAAAGGGTATTCTAGAGGCGGGGCTGACAAAACATTATTTATTCAAAGAACAAATGATCAACTCATTGTCACACAAATCTATGTTGATGATATCTTTTTTGGGGGGTTTCCTCAAGATCTTGTTAATAACTTTATTGATATCATGAAGTCAGAATTTGAGATGAGCATGATGGGAGAACTATCATGTTTTCGGGGGCTTCAAATCAAGCAGAAAAGTGAGGATATATTCATATCTCAAGAAATGTATGCCAAAAACATAGTTAAAAAATTCGGGTTAGAACAGTCTCGACACAAAAGGACTTCAGCTGCGATACACGTTAAAATTACCAAAGATACTGATGGTGCAAGAGCAGATCACAAACTTTACAGAAGTATAATCGGTAGTCTATTGTATCTAACTACCAGTCAACCTGACATTGCTTATGTTATTGGGATATGTGCTCGTTATCAGGCTGATCATCGAACATCACATTTAGAAGCTGTTAAAAGGATCCTTAAATATGTTCATGGAACAAGTGATTTTGGAATTCTGTATTCCTATGACACAACTTCGATTTTGGTTGGATATTGTGATGCCGATTGGGCAGGCTTTTCTGATGATAGGAAAAGCACCTCTGGAGGCTGTTTCATTCTTGGGAATAATCTTATCTCATGGTTTAGTAAGAAACAAAATTGTGTTTTCTTGTCTATAGCGGAAGATGAATACGTAGCGGCAGAGAGTGCTTGTACCCAGTTGATTTGGATGAAAAATATGTTGGATGAGTATGGATTCACACAGGATATCATGACTTTATATTGTGATAATATGAGTGCCATTGATATATCAAAAAATCTAGTTCAACATGTCAAACCAAACATATTGATATTAGGCATCATTTTATTAGAGAACTTGTTGAAAATAAGGTTATTACGCTGGATCATATTCGATCAAACGTGCAAATAG

mRNA sequence

ATGTATAAGCTTAATAAAGCTTTATATGGCCTTAAGCAAGCTTCTAGAGCTTGGTACAAACGATTAACAATTTATTTAAGTTGTAAAGGGTATTCTAGAGGCGGGGCTGACAAAACATTATTTATTCAAAGAACAAATGATCAACTCATTGTCACACAAATCTATGTTGATGATATCTTTTTTGGGGGGTTTCCTCAAGATCTTGTTAATAACTTTATTGATATCATGAAGTCAGAATTTGAGATGAGCATGATGGGAGAACTATCATGTTTTCGGGGGCTTCAAATCAAGCAGAAAAGTGAGGATATATTCATATCTCAAGAAATGTATGCCAAAAACATAGTTAAAAAATTCGGGTTAGAACAGTCTCGACACAAAAGGACTTCAGCTGCGATACACGTTAAAATTACCAAAGATACTGATGGTGCAAGAGCAGATCACAAACTTTACAGAAGTATAATCGGTAGTCTATTGTATCTAACTACCAGTCAACCTGACATTGCTTATGTTATTGGGATATGTGCTCGTTATCAGGCTGATCATCGAACATCACATTTAGAAGCTGTTAAAAGGATCCTTAAATATGTTCATGGAACAAGTGATTTTGGAATTCTGTATTCCTATGACACAACTTCGATTTTGGTTGGATATTGTGATGCCGATTGGGCAGGCTTTTCTGATGATAGGAAAAGCACCTCTGGAGGCTGTTTCATTCTTGGGAATAATCTTATCTCATGGTTTAGTAAGAAACAAAATTGTGTTTTCTTGTCTATAGCGGAAGATGAATACGTAGCGGCAGAGAGTGCTTGTACCCAGTTGATTTGGATGAAAAATATGTTGGATGAGTATGGATTCACACAGGATATCATGACTTTATATTGTGATAATATGAGTGCCATTGATATATCAAAAAATCTAGTTCAACATGTCAAACCAAACATATTGATATTAGGCATCATTTTATTAGAGAACTTGTTGAAAATAAGGTTATTACGCTGGATCATATTCGATCAAACGTGCAAATAG

Coding sequence (CDS)

ATGTATAAGCTTAATAAAGCTTTATATGGCCTTAAGCAAGCTTCTAGAGCTTGGTACAAACGATTAACAATTTATTTAAGTTGTAAAGGGTATTCTAGAGGCGGGGCTGACAAAACATTATTTATTCAAAGAACAAATGATCAACTCATTGTCACACAAATCTATGTTGATGATATCTTTTTTGGGGGGTTTCCTCAAGATCTTGTTAATAACTTTATTGATATCATGAAGTCAGAATTTGAGATGAGCATGATGGGAGAACTATCATGTTTTCGGGGGCTTCAAATCAAGCAGAAAAGTGAGGATATATTCATATCTCAAGAAATGTATGCCAAAAACATAGTTAAAAAATTCGGGTTAGAACAGTCTCGACACAAAAGGACTTCAGCTGCGATACACGTTAAAATTACCAAAGATACTGATGGTGCAAGAGCAGATCACAAACTTTACAGAAGTATAATCGGTAGTCTATTGTATCTAACTACCAGTCAACCTGACATTGCTTATGTTATTGGGATATGTGCTCGTTATCAGGCTGATCATCGAACATCACATTTAGAAGCTGTTAAAAGGATCCTTAAATATGTTCATGGAACAAGTGATTTTGGAATTCTGTATTCCTATGACACAACTTCGATTTTGGTTGGATATTGTGATGCCGATTGGGCAGGCTTTTCTGATGATAGGAAAAGCACCTCTGGAGGCTGTTTCATTCTTGGGAATAATCTTATCTCATGGTTTAGTAAGAAACAAAATTGTGTTTTCTTGTCTATAGCGGAAGATGAATACGTAGCGGCAGAGAGTGCTTGTACCCAGTTGATTTGGATGAAAAATATGTTGGATGAGTATGGATTCACACAGGATATCATGACTTTATATTGTGATAATATGAGTGCCATTGATATATCAAAAAATCTAGTTCAACATGTCAAACCAAACATATTGATATTAGGCATCATTTTATTAGAGAACTTGTTGAAAATAAGGTTATTACGCTGGATCATATTCGATCAAACGTGCAAATAG

Protein sequence

MYKLNKALYGLKQASRAWYKRLTIYLSCKGYSRGGADKTLFIQRTNDQLIVTQIYVDDIFFGGFPQDLVNNFIDIMKSEFEMSMMGELSCFRGLQIKQKSEDIFISQEMYAKNIVKKFGLEQSRHKRTSAAIHVKITKDTDGARADHKLYRSIIGSLLYLTTSQPDIAYVIGICARYQADHRTSHLEAVKRILKYVHGTSDFGILYSYDTTSILVGYCDADWAGFSDDRKSTSGGCFILGNNLISWFSKKQNCVFLSIAEDEYVAAESACTQLIWMKNMLDEYGFTQDIMTLYCDNMSAIDISKNLVQHVKPNILILGIILLENLLKIRLLRWIIFDQTCK
Homology
BLAST of Cmc01g0025771 vs. NCBI nr
Match: TYK23188.1 (gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 491.5 bits (1264), Expect = 5.9e-135
Identity = 239/332 (71.99%), Postives = 276/332 (83.13%), Query Frame = 0

Query: 1   MYKLNKALYGLKQASRAWYKRLTIYLSCKGYSRGGADKTLFIQRTNDQLIVTQIYVDDIF 60
           +YKLNKALYGLKQA R WY+RLT+YL  KGYSRG  DKTLFI R +DQL+V QIYVDDI 
Sbjct: 33  VYKLNKALYGLKQAPRVWYERLTVYLRGKGYSRGEIDKTLFIHRKSDQLLVAQIYVDDII 92

Query: 61  FGGFPQDLVNNFIDIMKSEFEMSMMGELSCFRGLQIKQKSEDIFISQEMYAKNIVKKFGL 120
           FGGFP DLVNNFI+IM+SEFEMSM+GELSCF G QIKQK++DI ISQ+ YAKN+ KKFGL
Sbjct: 93  FGGFPHDLVNNFINIMQSEFEMSMVGELSCFLGFQIKQKNDDIIISQKKYAKNMAKKFGL 152

Query: 121 EQSRHKRTSAAIHVKITKDTDGARADHKLYRSIIGSLLYLTTSQPDIAYVIGICARYQAD 180
           EQ+R+KRT AA HVK+T+D DGA  DHKLYRSI+ +LLYLT S+PDIAY +GICARYQAD
Sbjct: 153 EQARNKRTPAATHVKLTRDNDGAEVDHKLYRSIVSNLLYLTASRPDIAYAVGICARYQAD 212

Query: 181 HRTSHLEAVKRILKYVHGTSDFGILYSYDTTSILVGYCDADWAGFSDDRKSTSGGCFILG 240
            R SHLEAVKRILKYVHGT+DFG++YSYDTT  LVGYCDADWAG +DDRKSTSGGCF LG
Sbjct: 213 PRISHLEAVKRILKYVHGTNDFGMMYSYDTTPTLVGYCDADWAGLADDRKSTSGGCFFLG 272

Query: 241 NNLISWFSKKQNCVFLSIAEDEYVAAESACTQLIWMKNMLDEYGFTQDIMTLYCDNMSAI 300
           NNLI W SKKQNCV LS  E EY+ A S CTQLIWM+N+LDEYGF Q  +TLY DNMSAI
Sbjct: 273 NNLIYWLSKKQNCVSLSTTEAEYIVAGSGCTQLIWMENILDEYGFDQHTITLYSDNMSAI 332

Query: 301 DISKNLVQHVKPNILILGIILLENLLKIRLLR 333
           DISKN VQH +   + +    +  L++ +++R
Sbjct: 333 DISKNPVQHSRIKHIDIRHHFIRELVEDKVIR 364

BLAST of Cmc01g0025771 vs. NCBI nr
Match: KAA0053137.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK01543.1 gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 443.4 bits (1139), Expect = 1.8e-120
Identity = 221/309 (71.52%), Postives = 248/309 (80.26%), Query Frame = 0

Query: 1   MYKLNKALYGLKQASRAWYKRLTIYLSCKGYSRGGADKTLFIQRTNDQLIVTQIYVDDIF 60
           +YKLNKALYGLKQA RAWY RLT+YL  +GYSRG  DK LFI R +DQL+V QIYVDDI 
Sbjct: 565 VYKLNKALYGLKQALRAWYDRLTVYLRGRGYSRGEIDKILFIHRKSDQLLVAQIYVDDII 624

Query: 61  FGGFPQDLVNNFIDIMKSEFEMSMMGELSCFRGLQIKQKSEDIFISQEMYAKNIVKKFGL 120
           FGGFP DL+NNFI+IM+SEFEMSM+GELSCF GLQIKQK++ IFISQE YA+N+VKKFGL
Sbjct: 625 FGGFPLDLINNFINIMQSEFEMSMVGELSCFLGLQIKQKNDGIFISQEKYARNMVKKFGL 684

Query: 121 EQSRHKRTSAAIHVKITKDTDGARADHKLYRSIIGSLLYLTTSQPDIAYVIGICARYQAD 180
           +Q+R+KRT AA HVK+TKDT+GA  DHKLYRSI+GSLLYLT S+PDIAYV+GICARYQAD
Sbjct: 685 KQARNKRTPAATHVKLTKDTEGAEVDHKLYRSIVGSLLYLTASRPDIAYVVGICARYQAD 744

Query: 181 HRTSHLEAVKRILKYVHGTSDFGILYSYDTTSILVGYCDADWAGFSDDRKSTSGGCFILG 240
            R + LE VKRILKYVHGTSDFG++YSYDTTS LVGYCDADWAG +DDRK+         
Sbjct: 745 PRITQLEVVKRILKYVHGTSDFGMMYSYDTTSTLVGYCDADWAGSADDRKT--------- 804

Query: 241 NNLISWFSKKQNCVFLSIAEDEYVAAESACTQLIWMKNMLDEYGFTQDIMTLYCDNMSAI 300
                              E EY+AA S CTQLIWMKNML EYGF QD MTLYCDNMSAI
Sbjct: 805 -------------------EAEYIAAGSGCTQLIWMKNMLLEYGFDQDTMTLYCDNMSAI 845

Query: 301 DISKNLVQH 310
           DI KNLVQH
Sbjct: 865 DIPKNLVQH 845

BLAST of Cmc01g0025771 vs. NCBI nr
Match: KAA0054623.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 431.4 bits (1108), Expect = 7.2e-117
Identity = 209/282 (74.11%), Postives = 237/282 (84.04%), Query Frame = 0

Query: 1   MYKLNKALYGLKQASRAWYKRLTIYLSCKGYSRGGADKTLFIQRTNDQLIVTQIYVDDIF 60
           +YKLNKALYGLKQA   WY++LT+YL  +GYSRG  DKTL I RT+  LIV QIYVDDI 
Sbjct: 539 LYKLNKALYGLKQAPLTWYEQLTMYLGERGYSRGETDKTLLINRTSTDLIVAQIYVDDII 598

Query: 61  FGGFPQDLVNNFIDIMKSEFEMSMMGELSCFRGLQIKQKSEDIFISQEMYAKNIVKKFGL 120
           FGGFP+ LVNNFI+IM SEFEMS++GELSCF GLQIKQ+SE +F+SQE YAKN+VKKFGL
Sbjct: 599 FGGFPKTLVNNFINIMTSEFEMSLVGELSCFLGLQIKQRSEGMFMSQEKYAKNLVKKFGL 658

Query: 121 EQSRHKRTSAAIHVKITKDTDGARADHKLYRSIIGSLLYLTTSQPDIAYVIGICARYQAD 180
           +QS++KRT AA H KITKDT G   DHKLYRS+IGS LYL  S+PDIAY + ICARYQ+D
Sbjct: 659 DQSQYKRTPAATHAKITKDTVGTAVDHKLYRSMIGSHLYLKASRPDIAYAVEICARYQSD 718

Query: 181 HRTSHLEAVKRILKYVHGTSDFGILYSYDTTSILVGYCDADWAGFSDDRKSTSGGCFILG 240
             TSHL AVKRI+KYVHGT+DFGILYSYDT S LVGYCDADWAG +DDRKSTSGGCF LG
Sbjct: 719 PCTSHLNAVKRIIKYVHGTTDFGILYSYDTFSKLVGYCDADWAGSADDRKSTSGGCFFLG 778

Query: 241 NNLISWFSKKQNCVFLSIAEDEYVAAESACTQLIWMKNMLDE 283
           NNL+SWFSKKQNCV LS  E EY+ A S CTQ+IWMKNML +
Sbjct: 779 NNLVSWFSKKQNCVSLSTTEVEYITAGSRCTQMIWMKNMLHD 820

BLAST of Cmc01g0025771 vs. NCBI nr
Match: AAO73523.1 (gag-pol polyprotein [Glycine max])

HSP 1 Score: 431.0 bits (1107), Expect = 9.4e-117
Identity = 202/309 (65.37%), Postives = 252/309 (81.55%), Query Frame = 0

Query: 1    MYKLNKALYGLKQASRAWYKRLTIYLSCKGYSRGGADKTLFIQRTNDQLIVTQIYVDDIF 60
            +Y+L KALYGLKQA RAWY+RLT +L+ +GY +GG DKTLF+++  + L++ QIYVDDI 
Sbjct: 1207 VYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIV 1266

Query: 61   FGGFPQDLVNNFIDIMKSEFEMSMMGELSCFRGLQIKQKSEDIFISQEMYAKNIVKKFGL 120
            FGG   +++ +F+  M+SEFEMS++GEL+ F GLQ+KQ  + IF+SQ  YAKNIVKKFG+
Sbjct: 1267 FGGMSNEMLRHFVQQMQSEFEMSLVGELTYFLGLQVKQMEDSIFLSQSRYAKNIVKKFGM 1326

Query: 121  EQSRHKRTSAAIHVKITKDTDGARADHKLYRSIIGSLLYLTTSQPDIAYVIGICARYQAD 180
            E + HKRT A  H+K++KD  G   D K YRS+IGSLLYLT S+PDI Y +G+CARYQA+
Sbjct: 1327 ENASHKRTPAPTHLKLSKDEAGTSVDQKPYRSMIGSLLYLTASRPDITYAVGVCARYQAN 1386

Query: 181  HRTSHLEAVKRILKYVHGTSDFGILYSYDTTSILVGYCDADWAGFSDDRKSTSGGCFILG 240
             + SHL  VKRILKYV+GTSD+GI+Y + ++S+LVGYCDADWAG +DDRKSTSGGCF LG
Sbjct: 1387 PKISHLNQVKRILKYVNGTSDYGIMYCHCSSSMLVGYCDADWAGSADDRKSTSGGCFYLG 1446

Query: 241  NNLISWFSKKQNCVFLSIAEDEYVAAESACTQLIWMKNMLDEYGFTQDIMTLYCDNMSAI 300
            NNLISWFSKKQNCV LS AE EY+AA S+C+QL+WMK ML EY   QD+MTLYCDNMSAI
Sbjct: 1447 NNLISWFSKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAI 1506

Query: 301  DISKNLVQH 310
            +ISKN VQH
Sbjct: 1507 NISKNPVQH 1515

BLAST of Cmc01g0025771 vs. NCBI nr
Match: AAO73529.1 (gag-pol polyprotein [Glycine max])

HSP 1 Score: 430.6 bits (1106), Expect = 1.2e-116
Identity = 202/309 (65.37%), Postives = 251/309 (81.23%), Query Frame = 0

Query: 1    MYKLNKALYGLKQASRAWYKRLTIYLSCKGYSRGGADKTLFIQRTNDQLIVTQIYVDDIF 60
            +Y+L KALYGLKQA RAWY+RLT +L+ +GY +GG DKTLF+++  + L++ QIYVDDI 
Sbjct: 1208 VYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIV 1267

Query: 61   FGGFPQDLVNNFIDIMKSEFEMSMMGELSCFRGLQIKQKSEDIFISQEMYAKNIVKKFGL 120
            FGG   +++ +F+  M+SEFEMS++GEL+ F GLQ+KQ  + IF+SQ  YAKNIVKKFG+
Sbjct: 1268 FGGMSNEMLRHFVQQMQSEFEMSLVGELTYFLGLQVKQMEDSIFLSQSKYAKNIVKKFGM 1327

Query: 121  EQSRHKRTSAAIHVKITKDTDGARADHKLYRSIIGSLLYLTTSQPDIAYVIGICARYQAD 180
            E + HKRT A  H+K++KD  G   D  LYRS+IGSLLYLT S+PDI Y +G+CARYQA+
Sbjct: 1328 ENASHKRTPAPTHLKLSKDEAGTSVDQSLYRSMIGSLLYLTASRPDITYAVGVCARYQAN 1387

Query: 181  HRTSHLEAVKRILKYVHGTSDFGILYSYDTTSILVGYCDADWAGFSDDRKSTSGGCFILG 240
             + SHL  VKRILKYV+GTSD+GI+Y + + S+LVGYCDADWAG +DDRKSTSGGCF LG
Sbjct: 1388 PKISHLNQVKRILKYVNGTSDYGIMYCHCSGSMLVGYCDADWAGSADDRKSTSGGCFYLG 1447

Query: 241  NNLISWFSKKQNCVFLSIAEDEYVAAESACTQLIWMKNMLDEYGFTQDIMTLYCDNMSAI 300
            NNLISWFSKKQNCV LS AE EY+AA S+C+QL+WMK ML EY   QD+MTLYCDNMSAI
Sbjct: 1448 NNLISWFSKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAI 1507

Query: 301  DISKNLVQH 310
            +ISKN VQH
Sbjct: 1508 NISKNPVQH 1516

BLAST of Cmc01g0025771 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 6.0e-50
Identity = 111/319 (34.80%), Postives = 180/319 (56.43%), Query Frame = 0

Query: 3    KLNKALYGLKQASRAWYKRLTIYLSCKGYSRGGADKTLFIQR-TNDQLIVTQIYVDDIFF 62
            KLNK+LYGLKQA R WY +   ++  + Y +  +D  ++ +R + +  I+  +YVDD+  
Sbjct: 955  KLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLI 1014

Query: 63   GGFPQDLVNNFIDIMKSEFEMSMMGELSCFRGLQI--KQKSEDIFISQEMYAKNIVKKFG 122
             G  + L+      +   F+M  +G      G++I  ++ S  +++SQE Y + ++++F 
Sbjct: 1015 VGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFN 1074

Query: 123  LEQSRHKRTSAAIHVKITKDTDGARADHK------LYRSIIGSLLY-LTTSQPDIAYVIG 182
            ++ ++   T  A H+K++K       + K       Y S +GSL+Y +  ++PDIA+ +G
Sbjct: 1075 MKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVG 1134

Query: 183  ICARYQADHRTSHLEAVKRILKYVHGTSDFGILYSYDTTSILVGYCDADWAGFSDDRKST 242
            + +R+  +    H EAVK IL+Y+ GT+   + +   +  IL GY DAD AG  D+RKS+
Sbjct: 1135 VVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFG-GSDPILKGYTDADMAGDIDNRKSS 1194

Query: 243  SGGCFILGNNLISWFSKKQNCVFLSIAEDEYVAAESACTQLIWMKNMLDEYGFTQDIMTL 302
            +G  F      ISW SK Q CV LS  E EY+AA     ++IW+K  L E G  Q    +
Sbjct: 1195 TGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQKEYVV 1254

Query: 303  YCDNMSAIDISKNLVQHVK 312
            YCD+ SAID+SKN + H +
Sbjct: 1255 YCDSQSAIDLSKNSMYHAR 1272

BLAST of Cmc01g0025771 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.2e-45
Identity = 110/331 (33.23%), Postives = 171/331 (51.66%), Query Frame = 0

Query: 3    KLNKALYGLKQASRAWYKRLTIYLSCKGYSRGGADKTLFIQRTNDQLIVTQIYVDDIFFG 62
            +L KA+YGLKQA RAWY  L  YL   G+    +D +LF+ +    +I   +YVDDI   
Sbjct: 1081 RLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILIT 1140

Query: 63   GFPQDLVNNFIDIMKSEFEMSMMGELSCFRGLQIKQKSEDIFISQEMYAKNIVKKFGLEQ 122
            G    L+ + +D +   F +    +L  F G++ K+  + + +SQ  Y  +++ +  +  
Sbjct: 1141 GNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLT 1200

Query: 123  SRHKRTSAAIHVKITKDTDGARADHKLYRSIIGSLLYLTTSQPDIAYVIGICARYQADHR 182
            ++   T  A   K+T  +     D   YR I+GSL YL  ++PD++Y +   ++Y     
Sbjct: 1201 AKPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPT 1260

Query: 183  TSHLEAVKRILKYVHGTSDFGILYSYDTTSILVGYCDADWAGFSDDRKSTSGGCFILGNN 242
              H  A+KR+L+Y+ GT D GI      T  L  Y DADWAG +DD  ST+G    LG++
Sbjct: 1261 DDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHH 1320

Query: 243  LISWFSKKQNCVFLSIAEDEYVAAESACTQLIWMKNMLDEYGF-TQDIMTLYCDNMSAID 302
             ISW SKKQ  V  S  E EY +  +  ++L W+ ++L E G        +YCDN+ A  
Sbjct: 1321 PISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATY 1380

Query: 303  ISKNLVQHVKPNILILGIILLENLLKIRLLR 333
            +  N V H +   + L    + N ++   LR
Sbjct: 1381 LCANPVFHSRMKHIALDYHFIRNQVQSGALR 1411

BLAST of Cmc01g0025771 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 4.5e-45
Identity = 111/331 (33.53%), Postives = 172/331 (51.96%), Query Frame = 0

Query: 3    KLNKALYGLKQASRAWYKRLTIYLSCKGYSRGGADKTLFIQRTNDQLIVTQIYVDDIFFG 62
            KL KALYGLKQA RAWY  L  YL   G+    +D +LF+ +    ++   +YVDDI   
Sbjct: 1098 KLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILIT 1157

Query: 63   GFPQDLVNNFIDIMKSEFEMSMMGELSCFRGLQIKQKSEDIFISQEMYAKNIVKKFGLEQ 122
            G    L++N +D +   F +    EL  F G++ K+    + +SQ  Y  +++ +  +  
Sbjct: 1158 GNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRVPTGLHLSQRRYILDLLARTNMIT 1217

Query: 123  SRHKRTSAAIHVKITKDTDGARADHKLYRSIIGSLLYLTTSQPDIAYVIGICARYQADHR 182
            ++   T  A   K++  +     D   YR I+GSL YL  ++PDI+Y +   +++     
Sbjct: 1218 AKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQFMHMPT 1277

Query: 183  TSHLEAVKRILKYVHGTSDFGILYSYDTTSILVGYCDADWAGFSDDRKSTSGGCFILGNN 242
              HL+A+KRIL+Y+ GT + GI      T  L  Y DADWAG  DD  ST+G    LG++
Sbjct: 1278 EEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHH 1337

Query: 243  LISWFSKKQNCVFLSIAEDEYVAAESACTQLIWMKNMLDEYGF-TQDIMTLYCDNMSAID 302
             ISW SKKQ  V  S  E EY +  +  +++ W+ ++L E G        +YCDN+ A  
Sbjct: 1338 PISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYCDNVGATY 1397

Query: 303  ISKNLVQHVKPNILILGIILLENLLKIRLLR 333
            +  N V H +   + +    + N ++   LR
Sbjct: 1398 LCANPVFHSRMKHIAIDYHFIRNQVQSGALR 1428

BLAST of Cmc01g0025771 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 161.8 bits (408), Expect = 1.4e-38
Identity = 98/311 (31.51%), Postives = 168/311 (54.02%), Query Frame = 0

Query: 3    KLNKALYGLKQASRAWYKRLTIYLSCKGYSRGGADKTLFI--QRTNDQLIVTQIYVDDIF 62
            KLNKA+YGLKQA+R W++     L    +     D+ ++I  +   ++ I   +YVDD+ 
Sbjct: 1033 KLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVV 1092

Query: 63   FGGFPQDLVNNFIDIMKSEFEMSMMGELSCFRGLQIKQKSEDIFISQEMYAKNIVKKFGL 122
                    +NNF   +  +F M+ + E+  F G++I+ + + I++SQ  Y K I+ KF +
Sbjct: 1093 IATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNM 1152

Query: 123  EQSRHKRTSAAIHVKITKDTDGARAD-HKLYRSIIGSLLY-LTTSQPDIAYVIGICARYQ 182
            E       S  +  KI  +   +  D +   RS+IG L+Y +  ++PD+   + I +RY 
Sbjct: 1153 ENC--NAVSTPLPSKINYELLNSDEDCNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYS 1212

Query: 183  ADHRTSHLEAVKRILKYVHGTSDFGILYSYDTT--SILVGYCDADWAGFSDDRKSTSGGC 242
            + + +   + +KR+L+Y+ GT D  +++  +    + ++GY D+DWAG   DRKST+G  
Sbjct: 1213 SKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYL 1272

Query: 243  F-ILGNNLISWFSKKQNCVFLSIAEDEYVAAESACTQLIWMKNMLDEYGF-TQDIMTLYC 302
            F +   NLI W +K+QN V  S  E EY+A   A  + +W+K +L       ++ + +Y 
Sbjct: 1273 FKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPIKIYE 1332

Query: 303  DNMSAIDISKN 306
            DN   I I+ N
Sbjct: 1333 DNQGCISIANN 1341

BLAST of Cmc01g0025771 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 7.4e-32
Identity = 78/223 (34.98%), Postives = 120/223 (53.81%), Query Frame = 0

Query: 54  IYVDDIFFGGFPQDLVNNFIDIMKSEFEMSMMGELSCFRGLQIKQKSEDIFISQEMYAKN 113
           +YVDDI   G    L+N  I  + S F M  +G +  F G+QIK     +F+SQ  YA+ 
Sbjct: 5   LYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQ 64

Query: 114 IVKKFGLEQSRHKRTSAAIHVKITKDTDGAR-ADHKLYRSIIGSLLYLTTSQPDIAYVIG 173
           I+   G+     K  S  + +K+      A+  D   +RSI+G+L YLT ++PDI+Y + 
Sbjct: 65  ILNNAGMLDC--KPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVN 124

Query: 174 ICARYQADHRTSHLEAVKRILKYVHGTSDFGILYSYDTTSILVGYCDADWAGFSDDRKST 233
           I  +   +   +  + +KR+L+YV GT   G+    ++   +  +CD+DWAG +  R+ST
Sbjct: 125 IVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRST 184

Query: 234 SGGCFILGNNLISWFSKKQNCVFLSIAEDEYVAAESACTQLIW 276
           +G C  LG N+ISW +K+Q  V  S  E EY A      +L W
Sbjct: 185 TGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

BLAST of Cmc01g0025771 vs. ExPASy TrEMBL
Match: A0A5D3DI97 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G002180 PE=4 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 2.8e-135
Identity = 239/332 (71.99%), Postives = 276/332 (83.13%), Query Frame = 0

Query: 1   MYKLNKALYGLKQASRAWYKRLTIYLSCKGYSRGGADKTLFIQRTNDQLIVTQIYVDDIF 60
           +YKLNKALYGLKQA R WY+RLT+YL  KGYSRG  DKTLFI R +DQL+V QIYVDDI 
Sbjct: 33  VYKLNKALYGLKQAPRVWYERLTVYLRGKGYSRGEIDKTLFIHRKSDQLLVAQIYVDDII 92

Query: 61  FGGFPQDLVNNFIDIMKSEFEMSMMGELSCFRGLQIKQKSEDIFISQEMYAKNIVKKFGL 120
           FGGFP DLVNNFI+IM+SEFEMSM+GELSCF G QIKQK++DI ISQ+ YAKN+ KKFGL
Sbjct: 93  FGGFPHDLVNNFINIMQSEFEMSMVGELSCFLGFQIKQKNDDIIISQKKYAKNMAKKFGL 152

Query: 121 EQSRHKRTSAAIHVKITKDTDGARADHKLYRSIIGSLLYLTTSQPDIAYVIGICARYQAD 180
           EQ+R+KRT AA HVK+T+D DGA  DHKLYRSI+ +LLYLT S+PDIAY +GICARYQAD
Sbjct: 153 EQARNKRTPAATHVKLTRDNDGAEVDHKLYRSIVSNLLYLTASRPDIAYAVGICARYQAD 212

Query: 181 HRTSHLEAVKRILKYVHGTSDFGILYSYDTTSILVGYCDADWAGFSDDRKSTSGGCFILG 240
            R SHLEAVKRILKYVHGT+DFG++YSYDTT  LVGYCDADWAG +DDRKSTSGGCF LG
Sbjct: 213 PRISHLEAVKRILKYVHGTNDFGMMYSYDTTPTLVGYCDADWAGLADDRKSTSGGCFFLG 272

Query: 241 NNLISWFSKKQNCVFLSIAEDEYVAAESACTQLIWMKNMLDEYGFTQDIMTLYCDNMSAI 300
           NNLI W SKKQNCV LS  E EY+ A S CTQLIWM+N+LDEYGF Q  +TLY DNMSAI
Sbjct: 273 NNLIYWLSKKQNCVSLSTTEAEYIVAGSGCTQLIWMENILDEYGFDQHTITLYSDNMSAI 332

Query: 301 DISKNLVQHVKPNILILGIILLENLLKIRLLR 333
           DISKN VQH +   + +    +  L++ +++R
Sbjct: 333 DISKNPVQHSRIKHIDIRHHFIRELVEDKVIR 364

BLAST of Cmc01g0025771 vs. ExPASy TrEMBL
Match: A0A5D3BPB3 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G001130 PE=4 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 8.9e-121
Identity = 221/309 (71.52%), Postives = 248/309 (80.26%), Query Frame = 0

Query: 1   MYKLNKALYGLKQASRAWYKRLTIYLSCKGYSRGGADKTLFIQRTNDQLIVTQIYVDDIF 60
           +YKLNKALYGLKQA RAWY RLT+YL  +GYSRG  DK LFI R +DQL+V QIYVDDI 
Sbjct: 565 VYKLNKALYGLKQALRAWYDRLTVYLRGRGYSRGEIDKILFIHRKSDQLLVAQIYVDDII 624

Query: 61  FGGFPQDLVNNFIDIMKSEFEMSMMGELSCFRGLQIKQKSEDIFISQEMYAKNIVKKFGL 120
           FGGFP DL+NNFI+IM+SEFEMSM+GELSCF GLQIKQK++ IFISQE YA+N+VKKFGL
Sbjct: 625 FGGFPLDLINNFINIMQSEFEMSMVGELSCFLGLQIKQKNDGIFISQEKYARNMVKKFGL 684

Query: 121 EQSRHKRTSAAIHVKITKDTDGARADHKLYRSIIGSLLYLTTSQPDIAYVIGICARYQAD 180
           +Q+R+KRT AA HVK+TKDT+GA  DHKLYRSI+GSLLYLT S+PDIAYV+GICARYQAD
Sbjct: 685 KQARNKRTPAATHVKLTKDTEGAEVDHKLYRSIVGSLLYLTASRPDIAYVVGICARYQAD 744

Query: 181 HRTSHLEAVKRILKYVHGTSDFGILYSYDTTSILVGYCDADWAGFSDDRKSTSGGCFILG 240
            R + LE VKRILKYVHGTSDFG++YSYDTTS LVGYCDADWAG +DDRK+         
Sbjct: 745 PRITQLEVVKRILKYVHGTSDFGMMYSYDTTSTLVGYCDADWAGSADDRKT--------- 804

Query: 241 NNLISWFSKKQNCVFLSIAEDEYVAAESACTQLIWMKNMLDEYGFTQDIMTLYCDNMSAI 300
                              E EY+AA S CTQLIWMKNML EYGF QD MTLYCDNMSAI
Sbjct: 805 -------------------EAEYIAAGSGCTQLIWMKNMLLEYGFDQDTMTLYCDNMSAI 845

Query: 301 DISKNLVQH 310
           DI KNLVQH
Sbjct: 865 DIPKNLVQH 845

BLAST of Cmc01g0025771 vs. ExPASy TrEMBL
Match: A0A5A7UF87 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G004260 PE=4 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 3.5e-117
Identity = 209/282 (74.11%), Postives = 237/282 (84.04%), Query Frame = 0

Query: 1   MYKLNKALYGLKQASRAWYKRLTIYLSCKGYSRGGADKTLFIQRTNDQLIVTQIYVDDIF 60
           +YKLNKALYGLKQA   WY++LT+YL  +GYSRG  DKTL I RT+  LIV QIYVDDI 
Sbjct: 539 LYKLNKALYGLKQAPLTWYEQLTMYLGERGYSRGETDKTLLINRTSTDLIVAQIYVDDII 598

Query: 61  FGGFPQDLVNNFIDIMKSEFEMSMMGELSCFRGLQIKQKSEDIFISQEMYAKNIVKKFGL 120
           FGGFP+ LVNNFI+IM SEFEMS++GELSCF GLQIKQ+SE +F+SQE YAKN+VKKFGL
Sbjct: 599 FGGFPKTLVNNFINIMTSEFEMSLVGELSCFLGLQIKQRSEGMFMSQEKYAKNLVKKFGL 658

Query: 121 EQSRHKRTSAAIHVKITKDTDGARADHKLYRSIIGSLLYLTTSQPDIAYVIGICARYQAD 180
           +QS++KRT AA H KITKDT G   DHKLYRS+IGS LYL  S+PDIAY + ICARYQ+D
Sbjct: 659 DQSQYKRTPAATHAKITKDTVGTAVDHKLYRSMIGSHLYLKASRPDIAYAVEICARYQSD 718

Query: 181 HRTSHLEAVKRILKYVHGTSDFGILYSYDTTSILVGYCDADWAGFSDDRKSTSGGCFILG 240
             TSHL AVKRI+KYVHGT+DFGILYSYDT S LVGYCDADWAG +DDRKSTSGGCF LG
Sbjct: 719 PCTSHLNAVKRIIKYVHGTTDFGILYSYDTFSKLVGYCDADWAGSADDRKSTSGGCFFLG 778

Query: 241 NNLISWFSKKQNCVFLSIAEDEYVAAESACTQLIWMKNMLDE 283
           NNL+SWFSKKQNCV LS  E EY+ A S CTQ+IWMKNML +
Sbjct: 779 NNLVSWFSKKQNCVSLSTTEVEYITAGSRCTQMIWMKNMLHD 820

BLAST of Cmc01g0025771 vs. ExPASy TrEMBL
Match: Q84VI2 (Gag-pol polyprotein OS=Glycine max OX=3847 GN=gag-pol PE=4 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 4.6e-117
Identity = 202/309 (65.37%), Postives = 252/309 (81.55%), Query Frame = 0

Query: 1    MYKLNKALYGLKQASRAWYKRLTIYLSCKGYSRGGADKTLFIQRTNDQLIVTQIYVDDIF 60
            +Y+L KALYGLKQA RAWY+RLT +L+ +GY +GG DKTLF+++  + L++ QIYVDDI 
Sbjct: 1207 VYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIV 1266

Query: 61   FGGFPQDLVNNFIDIMKSEFEMSMMGELSCFRGLQIKQKSEDIFISQEMYAKNIVKKFGL 120
            FGG   +++ +F+  M+SEFEMS++GEL+ F GLQ+KQ  + IF+SQ  YAKNIVKKFG+
Sbjct: 1267 FGGMSNEMLRHFVQQMQSEFEMSLVGELTYFLGLQVKQMEDSIFLSQSRYAKNIVKKFGM 1326

Query: 121  EQSRHKRTSAAIHVKITKDTDGARADHKLYRSIIGSLLYLTTSQPDIAYVIGICARYQAD 180
            E + HKRT A  H+K++KD  G   D K YRS+IGSLLYLT S+PDI Y +G+CARYQA+
Sbjct: 1327 ENASHKRTPAPTHLKLSKDEAGTSVDQKPYRSMIGSLLYLTASRPDITYAVGVCARYQAN 1386

Query: 181  HRTSHLEAVKRILKYVHGTSDFGILYSYDTTSILVGYCDADWAGFSDDRKSTSGGCFILG 240
             + SHL  VKRILKYV+GTSD+GI+Y + ++S+LVGYCDADWAG +DDRKSTSGGCF LG
Sbjct: 1387 PKISHLNQVKRILKYVNGTSDYGIMYCHCSSSMLVGYCDADWAGSADDRKSTSGGCFYLG 1446

Query: 241  NNLISWFSKKQNCVFLSIAEDEYVAAESACTQLIWMKNMLDEYGFTQDIMTLYCDNMSAI 300
            NNLISWFSKKQNCV LS AE EY+AA S+C+QL+WMK ML EY   QD+MTLYCDNMSAI
Sbjct: 1447 NNLISWFSKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAI 1506

Query: 301  DISKNLVQH 310
            +ISKN VQH
Sbjct: 1507 NISKNPVQH 1515

BLAST of Cmc01g0025771 vs. ExPASy TrEMBL
Match: Q84VH6 (Gag-pol polyprotein OS=Glycine max OX=3847 GN=gag-pol PE=4 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 5.9e-117
Identity = 202/309 (65.37%), Postives = 251/309 (81.23%), Query Frame = 0

Query: 1    MYKLNKALYGLKQASRAWYKRLTIYLSCKGYSRGGADKTLFIQRTNDQLIVTQIYVDDIF 60
            +Y+L KALYGLKQA RAWY+RLT +L+ +GY +GG DKTLF+++  + L++ QIYVDDI 
Sbjct: 1208 VYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIV 1267

Query: 61   FGGFPQDLVNNFIDIMKSEFEMSMMGELSCFRGLQIKQKSEDIFISQEMYAKNIVKKFGL 120
            FGG   +++ +F+  M+SEFEMS++GEL+ F GLQ+KQ  + IF+SQ  YAKNIVKKFG+
Sbjct: 1268 FGGMSNEMLRHFVQQMQSEFEMSLVGELTYFLGLQVKQMEDSIFLSQSKYAKNIVKKFGM 1327

Query: 121  EQSRHKRTSAAIHVKITKDTDGARADHKLYRSIIGSLLYLTTSQPDIAYVIGICARYQAD 180
            E + HKRT A  H+K++KD  G   D  LYRS+IGSLLYLT S+PDI Y +G+CARYQA+
Sbjct: 1328 ENASHKRTPAPTHLKLSKDEAGTSVDQSLYRSMIGSLLYLTASRPDITYAVGVCARYQAN 1387

Query: 181  HRTSHLEAVKRILKYVHGTSDFGILYSYDTTSILVGYCDADWAGFSDDRKSTSGGCFILG 240
             + SHL  VKRILKYV+GTSD+GI+Y + + S+LVGYCDADWAG +DDRKSTSGGCF LG
Sbjct: 1388 PKISHLNQVKRILKYVNGTSDYGIMYCHCSGSMLVGYCDADWAGSADDRKSTSGGCFYLG 1447

Query: 241  NNLISWFSKKQNCVFLSIAEDEYVAAESACTQLIWMKNMLDEYGFTQDIMTLYCDNMSAI 300
            NNLISWFSKKQNCV LS AE EY+AA S+C+QL+WMK ML EY   QD+MTLYCDNMSAI
Sbjct: 1448 NNLISWFSKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAI 1507

Query: 301  DISKNLVQH 310
            +ISKN VQH
Sbjct: 1508 NISKNPVQH 1516

BLAST of Cmc01g0025771 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 173.3 bits (438), Expect = 3.3e-43
Identity = 104/307 (33.88%), Postives = 159/307 (51.79%), Query Frame = 0

Query: 4   LNKALYGLKQASRAWYKRLTIYLSCKGYSRGGADKTLFIQRTNDQLIVTQIYVDDIFFGG 63
           L K++YGLKQASR W+ + ++ L   G+ +  +D T F++ T    +   +YVDDI    
Sbjct: 232 LKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICS 291

Query: 64  FPQDLVNNFIDIMKSEFEMSMMGELSCFRGLQIKQKSEDIFISQEMYAKNIVKKFGLEQS 123
                V+     +KS F++  +G L  F GL+I + +  I I Q  YA +++ + GL   
Sbjct: 292 NNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGC 351

Query: 124 RHKRTSAAIHVKITKDTDGARADHKLYRSIIGSLLYLTTSQPDIAYVIGICARYQADHRT 183
           +         V  +  + G   D K YR +IG L+YL  ++ DI++ +   +++    R 
Sbjct: 352 KPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRL 411

Query: 184 SHLEAVKRILKYVHGTSDFGILYSYDTTSILVGYCDADWAGFSDDRKSTSGGCFILGNNL 243
           +H +AV +IL Y+ GT   G+ YS      L  + DA +    D R+ST+G C  LG +L
Sbjct: 412 AHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSL 471

Query: 244 ISWFSKKQNCVFLSIAEDEYVAAESACTQLIWMKNMLDEYGFTQDIMT-LYCDNMSAIDI 303
           ISW SKKQ  V  S AE EY A   A  +++W+     E        T L+CDN +AI I
Sbjct: 472 ISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHI 531

Query: 304 SKNLVQH 310
           + N V H
Sbjct: 532 ATNAVFH 538

BLAST of Cmc01g0025771 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 139.4 bits (350), Expect = 5.3e-33
Identity = 78/223 (34.98%), Postives = 120/223 (53.81%), Query Frame = 0

Query: 54  IYVDDIFFGGFPQDLVNNFIDIMKSEFEMSMMGELSCFRGLQIKQKSEDIFISQEMYAKN 113
           +YVDDI   G    L+N  I  + S F M  +G +  F G+QIK     +F+SQ  YA+ 
Sbjct: 5   LYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQ 64

Query: 114 IVKKFGLEQSRHKRTSAAIHVKITKDTDGAR-ADHKLYRSIIGSLLYLTTSQPDIAYVIG 173
           I+   G+     K  S  + +K+      A+  D   +RSI+G+L YLT ++PDI+Y + 
Sbjct: 65  ILNNAGMLDC--KPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVN 124

Query: 174 ICARYQADHRTSHLEAVKRILKYVHGTSDFGILYSYDTTSILVGYCDADWAGFSDDRKST 233
           I  +   +   +  + +KR+L+YV GT   G+    ++   +  +CD+DWAG +  R+ST
Sbjct: 125 IVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRST 184

Query: 234 SGGCFILGNNLISWFSKKQNCVFLSIAEDEYVAAESACTQLIW 276
           +G C  LG N+ISW +K+Q  V  S  E EY A      +L W
Sbjct: 185 TGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

BLAST of Cmc01g0025771 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 64.7 bits (156), Expect = 1.6e-10
Identity = 27/82 (32.93%), Postives = 50/82 (60.98%), Query Frame = 0

Query: 158 LYLTTSQPDIAYVIGICARYQADHRTSHLEAVKRILKYVHGTSDFGILYSYDTTSILVGY 217
           +YLT ++PD+ + +   +++ +  RT+ ++AV ++L YV GT   G+ YS  +   L  +
Sbjct: 1   MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 218 CDADWAGFSDDRKSTSGGCFIL 240
            D+DWA   D R+S +G C ++
Sbjct: 61  ADSDWASCPDTRRSVTGFCSLV 82

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TYK23188.15.9e-13571.99gag-pol polyprotein [Cucumis melo var. makuwa][more]
KAA0053137.11.8e-12071.52gag-pol polyprotein [Cucumis melo var. makuwa] >TYK01543.1 gag-pol polyprotein [... [more]
KAA0054623.17.2e-11774.11putative mitochondrial protein [Cucumis melo var. makuwa][more]
AAO73523.19.4e-11765.37gag-pol polyprotein [Glycine max][more]
AAO73529.11.2e-11665.37gag-pol polyprotein [Glycine max][more]
Match NameE-valueIdentityDescription
P109786.0e-5034.80Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
Q9ZT941.2e-4533.23Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
Q94HW24.5e-4533.53Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
P041461.4e-3831.51Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
P925197.4e-3234.98Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ... [more]
Match NameE-valueIdentityDescription
A0A5D3DI972.8e-13571.99Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G... [more]
A0A5D3BPB38.9e-12171.52Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G... [more]
A0A5A7UF873.5e-11774.11Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... [more]
Q84VI24.6e-11765.37Gag-pol polyprotein OS=Glycine max OX=3847 GN=gag-pol PE=4 SV=1[more]
Q84VH65.9e-11765.37Gag-pol polyprotein OS=Glycine max OX=3847 GN=gag-pol PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G23160.13.3e-4333.88cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00810.15.3e-3334.98DNA/RNA polymerases superfamily protein [more]
ATMG00240.11.6e-1032.93Gag-Pol-related retrotransposon family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 2..127
e-value: 8.7E-27
score: 94.3
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 65..261
NoneNo IPR availablePANTHERPTHR11439:SF335SUBFAMILY NOT NAMEDcoord: 65..261
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 215..309
e-value: 3.67895E-44
score: 146.459
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 2..312

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc01g0025771.1Cmc01g0025771.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding