Homology
BLAST of Cmc01g0025771 vs. NCBI nr
Match:
TYK23188.1 (gag-pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 491.5 bits (1264), Expect = 5.9e-135
Identity = 239/332 (71.99%), Postives = 276/332 (83.13%), Query Frame = 0
Query: 1 MYKLNKALYGLKQASRAWYKRLTIYLSCKGYSRGGADKTLFIQRTNDQLIVTQIYVDDIF 60
+YKLNKALYGLKQA R WY+RLT+YL KGYSRG DKTLFI R +DQL+V QIYVDDI
Sbjct: 33 VYKLNKALYGLKQAPRVWYERLTVYLRGKGYSRGEIDKTLFIHRKSDQLLVAQIYVDDII 92
Query: 61 FGGFPQDLVNNFIDIMKSEFEMSMMGELSCFRGLQIKQKSEDIFISQEMYAKNIVKKFGL 120
FGGFP DLVNNFI+IM+SEFEMSM+GELSCF G QIKQK++DI ISQ+ YAKN+ KKFGL
Sbjct: 93 FGGFPHDLVNNFINIMQSEFEMSMVGELSCFLGFQIKQKNDDIIISQKKYAKNMAKKFGL 152
Query: 121 EQSRHKRTSAAIHVKITKDTDGARADHKLYRSIIGSLLYLTTSQPDIAYVIGICARYQAD 180
EQ+R+KRT AA HVK+T+D DGA DHKLYRSI+ +LLYLT S+PDIAY +GICARYQAD
Sbjct: 153 EQARNKRTPAATHVKLTRDNDGAEVDHKLYRSIVSNLLYLTASRPDIAYAVGICARYQAD 212
Query: 181 HRTSHLEAVKRILKYVHGTSDFGILYSYDTTSILVGYCDADWAGFSDDRKSTSGGCFILG 240
R SHLEAVKRILKYVHGT+DFG++YSYDTT LVGYCDADWAG +DDRKSTSGGCF LG
Sbjct: 213 PRISHLEAVKRILKYVHGTNDFGMMYSYDTTPTLVGYCDADWAGLADDRKSTSGGCFFLG 272
Query: 241 NNLISWFSKKQNCVFLSIAEDEYVAAESACTQLIWMKNMLDEYGFTQDIMTLYCDNMSAI 300
NNLI W SKKQNCV LS E EY+ A S CTQLIWM+N+LDEYGF Q +TLY DNMSAI
Sbjct: 273 NNLIYWLSKKQNCVSLSTTEAEYIVAGSGCTQLIWMENILDEYGFDQHTITLYSDNMSAI 332
Query: 301 DISKNLVQHVKPNILILGIILLENLLKIRLLR 333
DISKN VQH + + + + L++ +++R
Sbjct: 333 DISKNPVQHSRIKHIDIRHHFIRELVEDKVIR 364
BLAST of Cmc01g0025771 vs. NCBI nr
Match:
KAA0053137.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK01543.1 gag-pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 443.4 bits (1139), Expect = 1.8e-120
Identity = 221/309 (71.52%), Postives = 248/309 (80.26%), Query Frame = 0
Query: 1 MYKLNKALYGLKQASRAWYKRLTIYLSCKGYSRGGADKTLFIQRTNDQLIVTQIYVDDIF 60
+YKLNKALYGLKQA RAWY RLT+YL +GYSRG DK LFI R +DQL+V QIYVDDI
Sbjct: 565 VYKLNKALYGLKQALRAWYDRLTVYLRGRGYSRGEIDKILFIHRKSDQLLVAQIYVDDII 624
Query: 61 FGGFPQDLVNNFIDIMKSEFEMSMMGELSCFRGLQIKQKSEDIFISQEMYAKNIVKKFGL 120
FGGFP DL+NNFI+IM+SEFEMSM+GELSCF GLQIKQK++ IFISQE YA+N+VKKFGL
Sbjct: 625 FGGFPLDLINNFINIMQSEFEMSMVGELSCFLGLQIKQKNDGIFISQEKYARNMVKKFGL 684
Query: 121 EQSRHKRTSAAIHVKITKDTDGARADHKLYRSIIGSLLYLTTSQPDIAYVIGICARYQAD 180
+Q+R+KRT AA HVK+TKDT+GA DHKLYRSI+GSLLYLT S+PDIAYV+GICARYQAD
Sbjct: 685 KQARNKRTPAATHVKLTKDTEGAEVDHKLYRSIVGSLLYLTASRPDIAYVVGICARYQAD 744
Query: 181 HRTSHLEAVKRILKYVHGTSDFGILYSYDTTSILVGYCDADWAGFSDDRKSTSGGCFILG 240
R + LE VKRILKYVHGTSDFG++YSYDTTS LVGYCDADWAG +DDRK+
Sbjct: 745 PRITQLEVVKRILKYVHGTSDFGMMYSYDTTSTLVGYCDADWAGSADDRKT--------- 804
Query: 241 NNLISWFSKKQNCVFLSIAEDEYVAAESACTQLIWMKNMLDEYGFTQDIMTLYCDNMSAI 300
E EY+AA S CTQLIWMKNML EYGF QD MTLYCDNMSAI
Sbjct: 805 -------------------EAEYIAAGSGCTQLIWMKNMLLEYGFDQDTMTLYCDNMSAI 845
Query: 301 DISKNLVQH 310
DI KNLVQH
Sbjct: 865 DIPKNLVQH 845
BLAST of Cmc01g0025771 vs. NCBI nr
Match:
KAA0054623.1 (putative mitochondrial protein [Cucumis melo var. makuwa])
HSP 1 Score: 431.4 bits (1108), Expect = 7.2e-117
Identity = 209/282 (74.11%), Postives = 237/282 (84.04%), Query Frame = 0
Query: 1 MYKLNKALYGLKQASRAWYKRLTIYLSCKGYSRGGADKTLFIQRTNDQLIVTQIYVDDIF 60
+YKLNKALYGLKQA WY++LT+YL +GYSRG DKTL I RT+ LIV QIYVDDI
Sbjct: 539 LYKLNKALYGLKQAPLTWYEQLTMYLGERGYSRGETDKTLLINRTSTDLIVAQIYVDDII 598
Query: 61 FGGFPQDLVNNFIDIMKSEFEMSMMGELSCFRGLQIKQKSEDIFISQEMYAKNIVKKFGL 120
FGGFP+ LVNNFI+IM SEFEMS++GELSCF GLQIKQ+SE +F+SQE YAKN+VKKFGL
Sbjct: 599 FGGFPKTLVNNFINIMTSEFEMSLVGELSCFLGLQIKQRSEGMFMSQEKYAKNLVKKFGL 658
Query: 121 EQSRHKRTSAAIHVKITKDTDGARADHKLYRSIIGSLLYLTTSQPDIAYVIGICARYQAD 180
+QS++KRT AA H KITKDT G DHKLYRS+IGS LYL S+PDIAY + ICARYQ+D
Sbjct: 659 DQSQYKRTPAATHAKITKDTVGTAVDHKLYRSMIGSHLYLKASRPDIAYAVEICARYQSD 718
Query: 181 HRTSHLEAVKRILKYVHGTSDFGILYSYDTTSILVGYCDADWAGFSDDRKSTSGGCFILG 240
TSHL AVKRI+KYVHGT+DFGILYSYDT S LVGYCDADWAG +DDRKSTSGGCF LG
Sbjct: 719 PCTSHLNAVKRIIKYVHGTTDFGILYSYDTFSKLVGYCDADWAGSADDRKSTSGGCFFLG 778
Query: 241 NNLISWFSKKQNCVFLSIAEDEYVAAESACTQLIWMKNMLDE 283
NNL+SWFSKKQNCV LS E EY+ A S CTQ+IWMKNML +
Sbjct: 779 NNLVSWFSKKQNCVSLSTTEVEYITAGSRCTQMIWMKNMLHD 820
BLAST of Cmc01g0025771 vs. NCBI nr
Match:
AAO73523.1 (gag-pol polyprotein [Glycine max])
HSP 1 Score: 431.0 bits (1107), Expect = 9.4e-117
Identity = 202/309 (65.37%), Postives = 252/309 (81.55%), Query Frame = 0
Query: 1 MYKLNKALYGLKQASRAWYKRLTIYLSCKGYSRGGADKTLFIQRTNDQLIVTQIYVDDIF 60
+Y+L KALYGLKQA RAWY+RLT +L+ +GY +GG DKTLF+++ + L++ QIYVDDI
Sbjct: 1207 VYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIV 1266
Query: 61 FGGFPQDLVNNFIDIMKSEFEMSMMGELSCFRGLQIKQKSEDIFISQEMYAKNIVKKFGL 120
FGG +++ +F+ M+SEFEMS++GEL+ F GLQ+KQ + IF+SQ YAKNIVKKFG+
Sbjct: 1267 FGGMSNEMLRHFVQQMQSEFEMSLVGELTYFLGLQVKQMEDSIFLSQSRYAKNIVKKFGM 1326
Query: 121 EQSRHKRTSAAIHVKITKDTDGARADHKLYRSIIGSLLYLTTSQPDIAYVIGICARYQAD 180
E + HKRT A H+K++KD G D K YRS+IGSLLYLT S+PDI Y +G+CARYQA+
Sbjct: 1327 ENASHKRTPAPTHLKLSKDEAGTSVDQKPYRSMIGSLLYLTASRPDITYAVGVCARYQAN 1386
Query: 181 HRTSHLEAVKRILKYVHGTSDFGILYSYDTTSILVGYCDADWAGFSDDRKSTSGGCFILG 240
+ SHL VKRILKYV+GTSD+GI+Y + ++S+LVGYCDADWAG +DDRKSTSGGCF LG
Sbjct: 1387 PKISHLNQVKRILKYVNGTSDYGIMYCHCSSSMLVGYCDADWAGSADDRKSTSGGCFYLG 1446
Query: 241 NNLISWFSKKQNCVFLSIAEDEYVAAESACTQLIWMKNMLDEYGFTQDIMTLYCDNMSAI 300
NNLISWFSKKQNCV LS AE EY+AA S+C+QL+WMK ML EY QD+MTLYCDNMSAI
Sbjct: 1447 NNLISWFSKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAI 1506
Query: 301 DISKNLVQH 310
+ISKN VQH
Sbjct: 1507 NISKNPVQH 1515
BLAST of Cmc01g0025771 vs. NCBI nr
Match:
AAO73529.1 (gag-pol polyprotein [Glycine max])
HSP 1 Score: 430.6 bits (1106), Expect = 1.2e-116
Identity = 202/309 (65.37%), Postives = 251/309 (81.23%), Query Frame = 0
Query: 1 MYKLNKALYGLKQASRAWYKRLTIYLSCKGYSRGGADKTLFIQRTNDQLIVTQIYVDDIF 60
+Y+L KALYGLKQA RAWY+RLT +L+ +GY +GG DKTLF+++ + L++ QIYVDDI
Sbjct: 1208 VYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIV 1267
Query: 61 FGGFPQDLVNNFIDIMKSEFEMSMMGELSCFRGLQIKQKSEDIFISQEMYAKNIVKKFGL 120
FGG +++ +F+ M+SEFEMS++GEL+ F GLQ+KQ + IF+SQ YAKNIVKKFG+
Sbjct: 1268 FGGMSNEMLRHFVQQMQSEFEMSLVGELTYFLGLQVKQMEDSIFLSQSKYAKNIVKKFGM 1327
Query: 121 EQSRHKRTSAAIHVKITKDTDGARADHKLYRSIIGSLLYLTTSQPDIAYVIGICARYQAD 180
E + HKRT A H+K++KD G D LYRS+IGSLLYLT S+PDI Y +G+CARYQA+
Sbjct: 1328 ENASHKRTPAPTHLKLSKDEAGTSVDQSLYRSMIGSLLYLTASRPDITYAVGVCARYQAN 1387
Query: 181 HRTSHLEAVKRILKYVHGTSDFGILYSYDTTSILVGYCDADWAGFSDDRKSTSGGCFILG 240
+ SHL VKRILKYV+GTSD+GI+Y + + S+LVGYCDADWAG +DDRKSTSGGCF LG
Sbjct: 1388 PKISHLNQVKRILKYVNGTSDYGIMYCHCSGSMLVGYCDADWAGSADDRKSTSGGCFYLG 1447
Query: 241 NNLISWFSKKQNCVFLSIAEDEYVAAESACTQLIWMKNMLDEYGFTQDIMTLYCDNMSAI 300
NNLISWFSKKQNCV LS AE EY+AA S+C+QL+WMK ML EY QD+MTLYCDNMSAI
Sbjct: 1448 NNLISWFSKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAI 1507
Query: 301 DISKNLVQH 310
+ISKN VQH
Sbjct: 1508 NISKNPVQH 1516
BLAST of Cmc01g0025771 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 199.5 bits (506), Expect = 6.0e-50
Identity = 111/319 (34.80%), Postives = 180/319 (56.43%), Query Frame = 0
Query: 3 KLNKALYGLKQASRAWYKRLTIYLSCKGYSRGGADKTLFIQR-TNDQLIVTQIYVDDIFF 62
KLNK+LYGLKQA R WY + ++ + Y + +D ++ +R + + I+ +YVDD+
Sbjct: 955 KLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLI 1014
Query: 63 GGFPQDLVNNFIDIMKSEFEMSMMGELSCFRGLQI--KQKSEDIFISQEMYAKNIVKKFG 122
G + L+ + F+M +G G++I ++ S +++SQE Y + ++++F
Sbjct: 1015 VGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFN 1074
Query: 123 LEQSRHKRTSAAIHVKITKDTDGARADHK------LYRSIIGSLLY-LTTSQPDIAYVIG 182
++ ++ T A H+K++K + K Y S +GSL+Y + ++PDIA+ +G
Sbjct: 1075 MKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVG 1134
Query: 183 ICARYQADHRTSHLEAVKRILKYVHGTSDFGILYSYDTTSILVGYCDADWAGFSDDRKST 242
+ +R+ + H EAVK IL+Y+ GT+ + + + IL GY DAD AG D+RKS+
Sbjct: 1135 VVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFG-GSDPILKGYTDADMAGDIDNRKSS 1194
Query: 243 SGGCFILGNNLISWFSKKQNCVFLSIAEDEYVAAESACTQLIWMKNMLDEYGFTQDIMTL 302
+G F ISW SK Q CV LS E EY+AA ++IW+K L E G Q +
Sbjct: 1195 TGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQKEYVV 1254
Query: 303 YCDNMSAIDISKNLVQHVK 312
YCD+ SAID+SKN + H +
Sbjct: 1255 YCDSQSAIDLSKNSMYHAR 1272
BLAST of Cmc01g0025771 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 185.3 bits (469), Expect = 1.2e-45
Identity = 110/331 (33.23%), Postives = 171/331 (51.66%), Query Frame = 0
Query: 3 KLNKALYGLKQASRAWYKRLTIYLSCKGYSRGGADKTLFIQRTNDQLIVTQIYVDDIFFG 62
+L KA+YGLKQA RAWY L YL G+ +D +LF+ + +I +YVDDI
Sbjct: 1081 RLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILIT 1140
Query: 63 GFPQDLVNNFIDIMKSEFEMSMMGELSCFRGLQIKQKSEDIFISQEMYAKNIVKKFGLEQ 122
G L+ + +D + F + +L F G++ K+ + + +SQ Y +++ + +
Sbjct: 1141 GNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLT 1200
Query: 123 SRHKRTSAAIHVKITKDTDGARADHKLYRSIIGSLLYLTTSQPDIAYVIGICARYQADHR 182
++ T A K+T + D YR I+GSL YL ++PD++Y + ++Y
Sbjct: 1201 AKPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPT 1260
Query: 183 TSHLEAVKRILKYVHGTSDFGILYSYDTTSILVGYCDADWAGFSDDRKSTSGGCFILGNN 242
H A+KR+L+Y+ GT D GI T L Y DADWAG +DD ST+G LG++
Sbjct: 1261 DDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHH 1320
Query: 243 LISWFSKKQNCVFLSIAEDEYVAAESACTQLIWMKNMLDEYGF-TQDIMTLYCDNMSAID 302
ISW SKKQ V S E EY + + ++L W+ ++L E G +YCDN+ A
Sbjct: 1321 PISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATY 1380
Query: 303 ISKNLVQHVKPNILILGIILLENLLKIRLLR 333
+ N V H + + L + N ++ LR
Sbjct: 1381 LCANPVFHSRMKHIALDYHFIRNQVQSGALR 1411
BLAST of Cmc01g0025771 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 183.3 bits (464), Expect = 4.5e-45
Identity = 111/331 (33.53%), Postives = 172/331 (51.96%), Query Frame = 0
Query: 3 KLNKALYGLKQASRAWYKRLTIYLSCKGYSRGGADKTLFIQRTNDQLIVTQIYVDDIFFG 62
KL KALYGLKQA RAWY L YL G+ +D +LF+ + ++ +YVDDI
Sbjct: 1098 KLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILIT 1157
Query: 63 GFPQDLVNNFIDIMKSEFEMSMMGELSCFRGLQIKQKSEDIFISQEMYAKNIVKKFGLEQ 122
G L++N +D + F + EL F G++ K+ + +SQ Y +++ + +
Sbjct: 1158 GNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRVPTGLHLSQRRYILDLLARTNMIT 1217
Query: 123 SRHKRTSAAIHVKITKDTDGARADHKLYRSIIGSLLYLTTSQPDIAYVIGICARYQADHR 182
++ T A K++ + D YR I+GSL YL ++PDI+Y + +++
Sbjct: 1218 AKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQFMHMPT 1277
Query: 183 TSHLEAVKRILKYVHGTSDFGILYSYDTTSILVGYCDADWAGFSDDRKSTSGGCFILGNN 242
HL+A+KRIL+Y+ GT + GI T L Y DADWAG DD ST+G LG++
Sbjct: 1278 EEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHH 1337
Query: 243 LISWFSKKQNCVFLSIAEDEYVAAESACTQLIWMKNMLDEYGF-TQDIMTLYCDNMSAID 302
ISW SKKQ V S E EY + + +++ W+ ++L E G +YCDN+ A
Sbjct: 1338 PISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYCDNVGATY 1397
Query: 303 ISKNLVQHVKPNILILGIILLENLLKIRLLR 333
+ N V H + + + + N ++ LR
Sbjct: 1398 LCANPVFHSRMKHIAIDYHFIRNQVQSGALR 1428
BLAST of Cmc01g0025771 vs. ExPASy Swiss-Prot
Match:
P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)
HSP 1 Score: 161.8 bits (408), Expect = 1.4e-38
Identity = 98/311 (31.51%), Postives = 168/311 (54.02%), Query Frame = 0
Query: 3 KLNKALYGLKQASRAWYKRLTIYLSCKGYSRGGADKTLFI--QRTNDQLIVTQIYVDDIF 62
KLNKA+YGLKQA+R W++ L + D+ ++I + ++ I +YVDD+
Sbjct: 1033 KLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVV 1092
Query: 63 FGGFPQDLVNNFIDIMKSEFEMSMMGELSCFRGLQIKQKSEDIFISQEMYAKNIVKKFGL 122
+NNF + +F M+ + E+ F G++I+ + + I++SQ Y K I+ KF +
Sbjct: 1093 IATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNM 1152
Query: 123 EQSRHKRTSAAIHVKITKDTDGARAD-HKLYRSIIGSLLY-LTTSQPDIAYVIGICARYQ 182
E S + KI + + D + RS+IG L+Y + ++PD+ + I +RY
Sbjct: 1153 ENC--NAVSTPLPSKINYELLNSDEDCNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYS 1212
Query: 183 ADHRTSHLEAVKRILKYVHGTSDFGILYSYDTT--SILVGYCDADWAGFSDDRKSTSGGC 242
+ + + + +KR+L+Y+ GT D +++ + + ++GY D+DWAG DRKST+G
Sbjct: 1213 SKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYL 1272
Query: 243 F-ILGNNLISWFSKKQNCVFLSIAEDEYVAAESACTQLIWMKNMLDEYGF-TQDIMTLYC 302
F + NLI W +K+QN V S E EY+A A + +W+K +L ++ + +Y
Sbjct: 1273 FKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPIKIYE 1332
Query: 303 DNMSAIDISKN 306
DN I I+ N
Sbjct: 1333 DNQGCISIANN 1341
BLAST of Cmc01g0025771 vs. ExPASy Swiss-Prot
Match:
P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)
HSP 1 Score: 139.4 bits (350), Expect = 7.4e-32
Identity = 78/223 (34.98%), Postives = 120/223 (53.81%), Query Frame = 0
Query: 54 IYVDDIFFGGFPQDLVNNFIDIMKSEFEMSMMGELSCFRGLQIKQKSEDIFISQEMYAKN 113
+YVDDI G L+N I + S F M +G + F G+QIK +F+SQ YA+
Sbjct: 5 LYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQ 64
Query: 114 IVKKFGLEQSRHKRTSAAIHVKITKDTDGAR-ADHKLYRSIIGSLLYLTTSQPDIAYVIG 173
I+ G+ K S + +K+ A+ D +RSI+G+L YLT ++PDI+Y +
Sbjct: 65 ILNNAGMLDC--KPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVN 124
Query: 174 ICARYQADHRTSHLEAVKRILKYVHGTSDFGILYSYDTTSILVGYCDADWAGFSDDRKST 233
I + + + + +KR+L+YV GT G+ ++ + +CD+DWAG + R+ST
Sbjct: 125 IVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRST 184
Query: 234 SGGCFILGNNLISWFSKKQNCVFLSIAEDEYVAAESACTQLIW 276
+G C LG N+ISW +K+Q V S E EY A +L W
Sbjct: 185 TGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
BLAST of Cmc01g0025771 vs. ExPASy TrEMBL
Match:
A0A5D3DI97 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G002180 PE=4 SV=1)
HSP 1 Score: 491.5 bits (1264), Expect = 2.8e-135
Identity = 239/332 (71.99%), Postives = 276/332 (83.13%), Query Frame = 0
Query: 1 MYKLNKALYGLKQASRAWYKRLTIYLSCKGYSRGGADKTLFIQRTNDQLIVTQIYVDDIF 60
+YKLNKALYGLKQA R WY+RLT+YL KGYSRG DKTLFI R +DQL+V QIYVDDI
Sbjct: 33 VYKLNKALYGLKQAPRVWYERLTVYLRGKGYSRGEIDKTLFIHRKSDQLLVAQIYVDDII 92
Query: 61 FGGFPQDLVNNFIDIMKSEFEMSMMGELSCFRGLQIKQKSEDIFISQEMYAKNIVKKFGL 120
FGGFP DLVNNFI+IM+SEFEMSM+GELSCF G QIKQK++DI ISQ+ YAKN+ KKFGL
Sbjct: 93 FGGFPHDLVNNFINIMQSEFEMSMVGELSCFLGFQIKQKNDDIIISQKKYAKNMAKKFGL 152
Query: 121 EQSRHKRTSAAIHVKITKDTDGARADHKLYRSIIGSLLYLTTSQPDIAYVIGICARYQAD 180
EQ+R+KRT AA HVK+T+D DGA DHKLYRSI+ +LLYLT S+PDIAY +GICARYQAD
Sbjct: 153 EQARNKRTPAATHVKLTRDNDGAEVDHKLYRSIVSNLLYLTASRPDIAYAVGICARYQAD 212
Query: 181 HRTSHLEAVKRILKYVHGTSDFGILYSYDTTSILVGYCDADWAGFSDDRKSTSGGCFILG 240
R SHLEAVKRILKYVHGT+DFG++YSYDTT LVGYCDADWAG +DDRKSTSGGCF LG
Sbjct: 213 PRISHLEAVKRILKYVHGTNDFGMMYSYDTTPTLVGYCDADWAGLADDRKSTSGGCFFLG 272
Query: 241 NNLISWFSKKQNCVFLSIAEDEYVAAESACTQLIWMKNMLDEYGFTQDIMTLYCDNMSAI 300
NNLI W SKKQNCV LS E EY+ A S CTQLIWM+N+LDEYGF Q +TLY DNMSAI
Sbjct: 273 NNLIYWLSKKQNCVSLSTTEAEYIVAGSGCTQLIWMENILDEYGFDQHTITLYSDNMSAI 332
Query: 301 DISKNLVQHVKPNILILGIILLENLLKIRLLR 333
DISKN VQH + + + + L++ +++R
Sbjct: 333 DISKNPVQHSRIKHIDIRHHFIRELVEDKVIR 364
BLAST of Cmc01g0025771 vs. ExPASy TrEMBL
Match:
A0A5D3BPB3 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G001130 PE=4 SV=1)
HSP 1 Score: 443.4 bits (1139), Expect = 8.9e-121
Identity = 221/309 (71.52%), Postives = 248/309 (80.26%), Query Frame = 0
Query: 1 MYKLNKALYGLKQASRAWYKRLTIYLSCKGYSRGGADKTLFIQRTNDQLIVTQIYVDDIF 60
+YKLNKALYGLKQA RAWY RLT+YL +GYSRG DK LFI R +DQL+V QIYVDDI
Sbjct: 565 VYKLNKALYGLKQALRAWYDRLTVYLRGRGYSRGEIDKILFIHRKSDQLLVAQIYVDDII 624
Query: 61 FGGFPQDLVNNFIDIMKSEFEMSMMGELSCFRGLQIKQKSEDIFISQEMYAKNIVKKFGL 120
FGGFP DL+NNFI+IM+SEFEMSM+GELSCF GLQIKQK++ IFISQE YA+N+VKKFGL
Sbjct: 625 FGGFPLDLINNFINIMQSEFEMSMVGELSCFLGLQIKQKNDGIFISQEKYARNMVKKFGL 684
Query: 121 EQSRHKRTSAAIHVKITKDTDGARADHKLYRSIIGSLLYLTTSQPDIAYVIGICARYQAD 180
+Q+R+KRT AA HVK+TKDT+GA DHKLYRSI+GSLLYLT S+PDIAYV+GICARYQAD
Sbjct: 685 KQARNKRTPAATHVKLTKDTEGAEVDHKLYRSIVGSLLYLTASRPDIAYVVGICARYQAD 744
Query: 181 HRTSHLEAVKRILKYVHGTSDFGILYSYDTTSILVGYCDADWAGFSDDRKSTSGGCFILG 240
R + LE VKRILKYVHGTSDFG++YSYDTTS LVGYCDADWAG +DDRK+
Sbjct: 745 PRITQLEVVKRILKYVHGTSDFGMMYSYDTTSTLVGYCDADWAGSADDRKT--------- 804
Query: 241 NNLISWFSKKQNCVFLSIAEDEYVAAESACTQLIWMKNMLDEYGFTQDIMTLYCDNMSAI 300
E EY+AA S CTQLIWMKNML EYGF QD MTLYCDNMSAI
Sbjct: 805 -------------------EAEYIAAGSGCTQLIWMKNMLLEYGFDQDTMTLYCDNMSAI 845
Query: 301 DISKNLVQH 310
DI KNLVQH
Sbjct: 865 DIPKNLVQH 845
BLAST of Cmc01g0025771 vs. ExPASy TrEMBL
Match:
A0A5A7UF87 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G004260 PE=4 SV=1)
HSP 1 Score: 431.4 bits (1108), Expect = 3.5e-117
Identity = 209/282 (74.11%), Postives = 237/282 (84.04%), Query Frame = 0
Query: 1 MYKLNKALYGLKQASRAWYKRLTIYLSCKGYSRGGADKTLFIQRTNDQLIVTQIYVDDIF 60
+YKLNKALYGLKQA WY++LT+YL +GYSRG DKTL I RT+ LIV QIYVDDI
Sbjct: 539 LYKLNKALYGLKQAPLTWYEQLTMYLGERGYSRGETDKTLLINRTSTDLIVAQIYVDDII 598
Query: 61 FGGFPQDLVNNFIDIMKSEFEMSMMGELSCFRGLQIKQKSEDIFISQEMYAKNIVKKFGL 120
FGGFP+ LVNNFI+IM SEFEMS++GELSCF GLQIKQ+SE +F+SQE YAKN+VKKFGL
Sbjct: 599 FGGFPKTLVNNFINIMTSEFEMSLVGELSCFLGLQIKQRSEGMFMSQEKYAKNLVKKFGL 658
Query: 121 EQSRHKRTSAAIHVKITKDTDGARADHKLYRSIIGSLLYLTTSQPDIAYVIGICARYQAD 180
+QS++KRT AA H KITKDT G DHKLYRS+IGS LYL S+PDIAY + ICARYQ+D
Sbjct: 659 DQSQYKRTPAATHAKITKDTVGTAVDHKLYRSMIGSHLYLKASRPDIAYAVEICARYQSD 718
Query: 181 HRTSHLEAVKRILKYVHGTSDFGILYSYDTTSILVGYCDADWAGFSDDRKSTSGGCFILG 240
TSHL AVKRI+KYVHGT+DFGILYSYDT S LVGYCDADWAG +DDRKSTSGGCF LG
Sbjct: 719 PCTSHLNAVKRIIKYVHGTTDFGILYSYDTFSKLVGYCDADWAGSADDRKSTSGGCFFLG 778
Query: 241 NNLISWFSKKQNCVFLSIAEDEYVAAESACTQLIWMKNMLDE 283
NNL+SWFSKKQNCV LS E EY+ A S CTQ+IWMKNML +
Sbjct: 779 NNLVSWFSKKQNCVSLSTTEVEYITAGSRCTQMIWMKNMLHD 820
BLAST of Cmc01g0025771 vs. ExPASy TrEMBL
Match:
Q84VI2 (Gag-pol polyprotein OS=Glycine max OX=3847 GN=gag-pol PE=4 SV=1)
HSP 1 Score: 431.0 bits (1107), Expect = 4.6e-117
Identity = 202/309 (65.37%), Postives = 252/309 (81.55%), Query Frame = 0
Query: 1 MYKLNKALYGLKQASRAWYKRLTIYLSCKGYSRGGADKTLFIQRTNDQLIVTQIYVDDIF 60
+Y+L KALYGLKQA RAWY+RLT +L+ +GY +GG DKTLF+++ + L++ QIYVDDI
Sbjct: 1207 VYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIV 1266
Query: 61 FGGFPQDLVNNFIDIMKSEFEMSMMGELSCFRGLQIKQKSEDIFISQEMYAKNIVKKFGL 120
FGG +++ +F+ M+SEFEMS++GEL+ F GLQ+KQ + IF+SQ YAKNIVKKFG+
Sbjct: 1267 FGGMSNEMLRHFVQQMQSEFEMSLVGELTYFLGLQVKQMEDSIFLSQSRYAKNIVKKFGM 1326
Query: 121 EQSRHKRTSAAIHVKITKDTDGARADHKLYRSIIGSLLYLTTSQPDIAYVIGICARYQAD 180
E + HKRT A H+K++KD G D K YRS+IGSLLYLT S+PDI Y +G+CARYQA+
Sbjct: 1327 ENASHKRTPAPTHLKLSKDEAGTSVDQKPYRSMIGSLLYLTASRPDITYAVGVCARYQAN 1386
Query: 181 HRTSHLEAVKRILKYVHGTSDFGILYSYDTTSILVGYCDADWAGFSDDRKSTSGGCFILG 240
+ SHL VKRILKYV+GTSD+GI+Y + ++S+LVGYCDADWAG +DDRKSTSGGCF LG
Sbjct: 1387 PKISHLNQVKRILKYVNGTSDYGIMYCHCSSSMLVGYCDADWAGSADDRKSTSGGCFYLG 1446
Query: 241 NNLISWFSKKQNCVFLSIAEDEYVAAESACTQLIWMKNMLDEYGFTQDIMTLYCDNMSAI 300
NNLISWFSKKQNCV LS AE EY+AA S+C+QL+WMK ML EY QD+MTLYCDNMSAI
Sbjct: 1447 NNLISWFSKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAI 1506
Query: 301 DISKNLVQH 310
+ISKN VQH
Sbjct: 1507 NISKNPVQH 1515
BLAST of Cmc01g0025771 vs. ExPASy TrEMBL
Match:
Q84VH6 (Gag-pol polyprotein OS=Glycine max OX=3847 GN=gag-pol PE=4 SV=1)
HSP 1 Score: 430.6 bits (1106), Expect = 5.9e-117
Identity = 202/309 (65.37%), Postives = 251/309 (81.23%), Query Frame = 0
Query: 1 MYKLNKALYGLKQASRAWYKRLTIYLSCKGYSRGGADKTLFIQRTNDQLIVTQIYVDDIF 60
+Y+L KALYGLKQA RAWY+RLT +L+ +GY +GG DKTLF+++ + L++ QIYVDDI
Sbjct: 1208 VYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIV 1267
Query: 61 FGGFPQDLVNNFIDIMKSEFEMSMMGELSCFRGLQIKQKSEDIFISQEMYAKNIVKKFGL 120
FGG +++ +F+ M+SEFEMS++GEL+ F GLQ+KQ + IF+SQ YAKNIVKKFG+
Sbjct: 1268 FGGMSNEMLRHFVQQMQSEFEMSLVGELTYFLGLQVKQMEDSIFLSQSKYAKNIVKKFGM 1327
Query: 121 EQSRHKRTSAAIHVKITKDTDGARADHKLYRSIIGSLLYLTTSQPDIAYVIGICARYQAD 180
E + HKRT A H+K++KD G D LYRS+IGSLLYLT S+PDI Y +G+CARYQA+
Sbjct: 1328 ENASHKRTPAPTHLKLSKDEAGTSVDQSLYRSMIGSLLYLTASRPDITYAVGVCARYQAN 1387
Query: 181 HRTSHLEAVKRILKYVHGTSDFGILYSYDTTSILVGYCDADWAGFSDDRKSTSGGCFILG 240
+ SHL VKRILKYV+GTSD+GI+Y + + S+LVGYCDADWAG +DDRKSTSGGCF LG
Sbjct: 1388 PKISHLNQVKRILKYVNGTSDYGIMYCHCSGSMLVGYCDADWAGSADDRKSTSGGCFYLG 1447
Query: 241 NNLISWFSKKQNCVFLSIAEDEYVAAESACTQLIWMKNMLDEYGFTQDIMTLYCDNMSAI 300
NNLISWFSKKQNCV LS AE EY+AA S+C+QL+WMK ML EY QD+MTLYCDNMSAI
Sbjct: 1448 NNLISWFSKKQNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAI 1507
Query: 301 DISKNLVQH 310
+ISKN VQH
Sbjct: 1508 NISKNPVQH 1516
BLAST of Cmc01g0025771 vs. TAIR 10
Match:
AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )
HSP 1 Score: 173.3 bits (438), Expect = 3.3e-43
Identity = 104/307 (33.88%), Postives = 159/307 (51.79%), Query Frame = 0
Query: 4 LNKALYGLKQASRAWYKRLTIYLSCKGYSRGGADKTLFIQRTNDQLIVTQIYVDDIFFGG 63
L K++YGLKQASR W+ + ++ L G+ + +D T F++ T + +YVDDI
Sbjct: 232 LKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICS 291
Query: 64 FPQDLVNNFIDIMKSEFEMSMMGELSCFRGLQIKQKSEDIFISQEMYAKNIVKKFGLEQS 123
V+ +KS F++ +G L F GL+I + + I I Q YA +++ + GL
Sbjct: 292 NNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGC 351
Query: 124 RHKRTSAAIHVKITKDTDGARADHKLYRSIIGSLLYLTTSQPDIAYVIGICARYQADHRT 183
+ V + + G D K YR +IG L+YL ++ DI++ + +++ R
Sbjct: 352 KPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRL 411
Query: 184 SHLEAVKRILKYVHGTSDFGILYSYDTTSILVGYCDADWAGFSDDRKSTSGGCFILGNNL 243
+H +AV +IL Y+ GT G+ YS L + DA + D R+ST+G C LG +L
Sbjct: 412 AHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSL 471
Query: 244 ISWFSKKQNCVFLSIAEDEYVAAESACTQLIWMKNMLDEYGFTQDIMT-LYCDNMSAIDI 303
ISW SKKQ V S AE EY A A +++W+ E T L+CDN +AI I
Sbjct: 472 ISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHI 531
Query: 304 SKNLVQH 310
+ N V H
Sbjct: 532 ATNAVFH 538
BLAST of Cmc01g0025771 vs. TAIR 10
Match:
ATMG00810.1 (DNA/RNA polymerases superfamily protein )
HSP 1 Score: 139.4 bits (350), Expect = 5.3e-33
Identity = 78/223 (34.98%), Postives = 120/223 (53.81%), Query Frame = 0
Query: 54 IYVDDIFFGGFPQDLVNNFIDIMKSEFEMSMMGELSCFRGLQIKQKSEDIFISQEMYAKN 113
+YVDDI G L+N I + S F M +G + F G+QIK +F+SQ YA+
Sbjct: 5 LYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQ 64
Query: 114 IVKKFGLEQSRHKRTSAAIHVKITKDTDGAR-ADHKLYRSIIGSLLYLTTSQPDIAYVIG 173
I+ G+ K S + +K+ A+ D +RSI+G+L YLT ++PDI+Y +
Sbjct: 65 ILNNAGMLDC--KPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVN 124
Query: 174 ICARYQADHRTSHLEAVKRILKYVHGTSDFGILYSYDTTSILVGYCDADWAGFSDDRKST 233
I + + + + +KR+L+YV GT G+ ++ + +CD+DWAG + R+ST
Sbjct: 125 IVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRST 184
Query: 234 SGGCFILGNNLISWFSKKQNCVFLSIAEDEYVAAESACTQLIW 276
+G C LG N+ISW +K+Q V S E EY A +L W
Sbjct: 185 TGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
BLAST of Cmc01g0025771 vs. TAIR 10
Match:
ATMG00240.1 (Gag-Pol-related retrotransposon family protein )
HSP 1 Score: 64.7 bits (156), Expect = 1.6e-10
Identity = 27/82 (32.93%), Postives = 50/82 (60.98%), Query Frame = 0
Query: 158 LYLTTSQPDIAYVIGICARYQADHRTSHLEAVKRILKYVHGTSDFGILYSYDTTSILVGY 217
+YLT ++PD+ + + +++ + RT+ ++AV ++L YV GT G+ YS + L +
Sbjct: 1 MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60
Query: 218 CDADWAGFSDDRKSTSGGCFIL 240
D+DWA D R+S +G C ++
Sbjct: 61 ADSDWASCPDTRRSVTGFCSLV 82
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
TYK23188.1 | 5.9e-135 | 71.99 | gag-pol polyprotein [Cucumis melo var. makuwa] | [more] |
KAA0053137.1 | 1.8e-120 | 71.52 | gag-pol polyprotein [Cucumis melo var. makuwa] >TYK01543.1 gag-pol polyprotein [... | [more] |
KAA0054623.1 | 7.2e-117 | 74.11 | putative mitochondrial protein [Cucumis melo var. makuwa] | [more] |
AAO73523.1 | 9.4e-117 | 65.37 | gag-pol polyprotein [Glycine max] | [more] |
AAO73529.1 | 1.2e-116 | 65.37 | gag-pol polyprotein [Glycine max] | [more] |
Match Name | E-value | Identity | Description | |
P10978 | 6.0e-50 | 34.80 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
Q9ZT94 | 1.2e-45 | 33.23 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
Q94HW2 | 4.5e-45 | 33.53 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
P04146 | 1.4e-38 | 31.51 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 | [more] |
P92519 | 7.4e-32 | 34.98 | Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ... | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3DI97 | 2.8e-135 | 71.99 | Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G... | [more] |
A0A5D3BPB3 | 8.9e-121 | 71.52 | Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G... | [more] |
A0A5A7UF87 | 3.5e-117 | 74.11 | Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... | [more] |
Q84VI2 | 4.6e-117 | 65.37 | Gag-pol polyprotein OS=Glycine max OX=3847 GN=gag-pol PE=4 SV=1 | [more] |
Q84VH6 | 5.9e-117 | 65.37 | Gag-pol polyprotein OS=Glycine max OX=3847 GN=gag-pol PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT4G23160.1 | 3.3e-43 | 33.88 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | [more] |
ATMG00810.1 | 5.3e-33 | 34.98 | DNA/RNA polymerases superfamily protein | [more] |
ATMG00240.1 | 1.6e-10 | 32.93 | Gag-Pol-related retrotransposon family protein | [more] |