Cmc01g0025451 (gene) Melon (Charmono) v1.1

Overview
NameCmc01g0025451
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUlp1-like peptidase
LocationCMiso1.1chr01: 26264429 .. 26264709 (-)
RNA-Seq ExpressionCmc01g0025451
SyntenyCmc01g0025451
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCAAGGGAATGATCATACTGATCAGAATGACAATGAGTATGTTGTTCAAGAACAACATACTCAACAACAACCTACTGAAGAACAACATACTGAACGTCAAGAGGAAACCCAAAGGTTAACATTTCATTCATTGTTTACTAGTTTATAAATACCTAACAATTGTATTTTTTTTCTTATTCTCATGTTTCTTCTCATTTTGTTTAGGGAACATGAAGAGGAACGTGGTAGTGATATAAGCATAGACGGTAGGGATGCAGACTTGCTAATGACTATAAGAGATA

mRNA sequence

TCAAGGGAATGATCATACTGATCAGAATGACAATGAGTATGTTGTTCAAGAACAACATACTCAACAACAACCTACTGAAGAACAACATACTGAACGTCAAGAGGAAACCCAAAGGGAACATGAAGAGGAACGTGGTAGTGATATAAGCATAGACGGTAGGGATGCAGACTTGCTAATGACTATAAGAGATA

Coding sequence (CDS)

ATGATCATACTGATCAGAATGACAATGAGTATGTTGTTCAAGAACAACATACTCAACAACAACCTACTGAAGAACAACATACTGAACGTCAAGAGGAAACCCAAAGGGAACATGAAGAGGAACGTGGTAGTGATATAA

Protein sequence

MIILIRMTMSMLFKNNILNNNLLKNNILNVKRKPKGNMKRNVVVI
Homology
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BLAST of Cmc01g0025451 vs. ExPASy TrEMBL
Match: A0A5A7T5L2 (Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G003640 PE=3 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 7.6e-04
Identity = 26/38 (68.42%), Postives = 32/38 (84.21%), Query Frame = 0 

Query: 5   IRMTMSMLFKNNILNNNLLKNNILNVKRKPKGNMKRNV 43
           ++  +  L +NNILNNNLLKNNILN+KRKPKGN+ RNV
Sbjct: 351 MKQMLERLVQNNILNNNLLKNNILNIKRKPKGNINRNV 388

The following BLAST results are available for this feature:
BLAST of Cmc01g0025451 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc01g0025451 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc01g0025451 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7T5L27.6e-0468.42Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G0... [more]
BLAST of Cmc01g0025451 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc01g0025451.1Cmc01g0025451.1mRNA