Cmc01g0024871 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc01g0024871
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	S-protein homolog
Location	CMiso1.1chr01: 25424257 .. 25424721 (+)
RNA-Seq Expression	Cmc01g0024871
Synteny	Cmc01g0024871

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCAAGGTATGTGAGAATGGTTTATTCAGTAGTATTATTTGGTTTGGTATTGATTCAACAACCATTGTTATTTGCAAAGGGATCTCGAATTCCACTACCACTCCAAAAGTGGCATGTTCATGTTGTTAATGGGCTAACAAATGACACTTTGTCTGTGCATTGCAAATCCAAAGATGATGATTTAGGACCCCACAACCTACTTAGCATTGGAGCTGAATTCCAATGGAGTTTTAAGATCAACGTTTGGAGAACCACTTTGTATTGGTGCTTACTACACAAGCCAAATGCTGATGTTTCTTTTGATGCTTTTTGGGTTGAGAGGAAACATATTTGGCTCTTTTATAGGTGCATGAACCAAAATTGTATTTGGATTGCCAAAGATGATGGAATTTACTTGAGAAACAATCCAGACAATTTTGACGAGCTTATTCATAACTGGGGGGAAACTAAGCTTATTTGA

mRNA sequence

ATGGATTCAAGGTATGTGAGAATGGTTTATTCAGTAGTATTATTTGGTTTGGTATTGATTCAACAACCATTGTTATTTGCAAAGGGATCTCGAATTCCACTACCACTCCAAAAGTGGCATGTTCATGTTGTTAATGGGCTAACAAATGACACTTTGTCTGTGCATTGCAAATCCAAAGATGATGATTTAGGACCCCACAACCTACTTAGCATTGGAGCTGAATTCCAATGGAGTTTTAAGATCAACGTTTGGAGAACCACTTTGTATTGGTGCTTACTACACAAGCCAAATGCTGATGTTTCTTTTGATGCTTTTTGGGTTGAGAGGAAACATATTTGGCTCTTTTATAGGTGCATGAACCAAAATTGTATTTGGATTGCCAAAGATGATGGAATTTACTTGAGAAACAATCCAGACAATTTTGACGAGCTTATTCATAACTGGGGGGAAACTAAGCTTATTTGA

Coding sequence (CDS)

ATGGATTCAAGGTATGTGAGAATGGTTTATTCAGTAGTATTATTTGGTTTGGTATTGATTCAACAACCATTGTTATTTGCAAAGGGATCTCGAATTCCACTACCACTCCAAAAGTGGCATGTTCATGTTGTTAATGGGCTAACAAATGACACTTTGTCTGTGCATTGCAAATCCAAAGATGATGATTTAGGACCCCACAACCTACTTAGCATTGGAGCTGAATTCCAATGGAGTTTTAAGATCAACGTTTGGAGAACCACTTTGTATTGGTGCTTACTACACAAGCCAAATGCTGATGTTTCTTTTGATGCTTTTTGGGTTGAGAGGAAACATATTTGGCTCTTTTATAGGTGCATGAACCAAAATTGTATTTGGATTGCCAAAGATGATGGAATTTACTTGAGAAACAATCCAGACAATTTTGACGAGCTTATTCATAACTGGGGGGAAACTAAGCTTATTTGA

Protein sequence

MDSRYVRMVYSVVLFGLVLIQQPLLFAKGSRIPLPLQKWHVHVVNGLTNDTLSVHCKSKDDDLGPHNLLSIGAEFQWSFKINVWRTTLYWCLLHKPNADVSFDAFWVERKHIWLFYRCMNQNCIWIAKDDGIYLRNNPDNFDELIHNWGETKLI

Homology

[Close]

BLAST of Cmc01g0024871 vs. NCBI nr
Match: XP_038896407.1 (S-protein homolog 1-like [Benincasa hispida])

HSP 1 Score: 278.9 bits (712), Expect = 2.7e-71
Identity = 122/154 (79.22%), Postives = 133/154 (86.36%), Query Frame = 0


Query: 1   MDSRYVRMVYSVVLFGLVLIQQPLLFAKGSRIPLPLQKWHVHVVNGLTNDTLSVHCKSKD 60
           M S Y+RMV S+VL GLVLIQQPLLFAKG  +PLPLQKWHVHVVNGL N TL VHCKSKD
Sbjct: 1   MGSSYMRMVSSLVLLGLVLIQQPLLFAKGDPVPLPLQKWHVHVVNGLKNATLFVHCKSKD 60

Query: 61  DDLGPHNLLSIGAEFQWSFKINVWRTTLYWCLLHKPNADVSFDAFWVERKHIWLFYRCMN 120
           DDLGP +L+S GAEFQWSFKIN+WRTTLYWC LHKPNADVSFDAFWVER+HIWL YRCMN
Sbjct: 61  DDLGPQHLVSNGAEFQWSFKINIWRTTLYWCSLHKPNADVSFDAFWVERRHIWLHYRCMN 120

Query: 121 QNCIWIAKDDGIYLRNNPDNFDELIHNWGETKLI 155
           QNC W+AKDDGIYLRNNPD  DE +H W E + +
Sbjct: 121 QNCFWMAKDDGIYLRNNPDAVDEFVHKWDEARQV 154

[Close]

BLAST of Cmc01g0024871 vs. NCBI nr
Match: XP_023004728.1 (S-protein homolog 1-like [Cucurbita maxima])

HSP 1 Score: 205.3 bits (521), Expect = 3.8e-49
Identity = 94/153 (61.44%), Postives = 112/153 (73.20%), Query Frame = 0


Query: 1   MDSRYVR---MVYSVVLFGLV--LIQQPLLFAKGSRIPLPLQKWHVHVVNGLTNDTLSVH 60
           M S Y++   +  +  L GL+   + QPL  A G    +P+QKW VHVVN L N TL VH
Sbjct: 44  MSSTYMKKRHLKAAAFLLGLLASALTQPLAMALGI---VPIQKWRVHVVNRLNNATLFVH 103

Query: 61  CKSKDDDLGPHNLLSIGAEFQWSFKINVWRTTLYWCLLHKPNADVSFDAFWVERKHIWLF 120
           CKSKDDDLG HNL+ IG+EFQWSFK N+W TTL+WCLL KPNA VSF+AFW+E+ HIWL 
Sbjct: 104 CKSKDDDLGFHNLVGIGSEFQWSFKNNLWATTLFWCLLRKPNAYVSFEAFWIEKTHIWLN 163

Query: 121 YRCMNQNCIWIAKDDGIYLRNNPDNFDELIHNW 149
           YRC  +NCIW AKDDG+YLRNNPD  DE +H W
Sbjct: 164 YRCYGRNCIWTAKDDGVYLRNNPDGVDERVHKW 193

[Close]

BLAST of Cmc01g0024871 vs. NCBI nr
Match: XP_022155194.1 (S-protein homolog 1-like [Momordica charantia])

HSP 1 Score: 201.4 bits (511), Expect = 5.5e-48
Identity = 85/123 (69.11%), Postives = 102/123 (82.93%), Query Frame = 0


Query: 32  IPLPLQKWHVHVVNGLTND-TLSVHCKSKDDDLGPHNLLSIGAEFQWSFKINVWRTTLYW 91
           +P+PL KW++HVVNGL+N+ TL VHCKSKDDDLG H+L+  G E QW+F+IN W+TTLYW
Sbjct: 22  LPMPLDKWNIHVVNGLSNNATLFVHCKSKDDDLGYHHLIGRGDELQWTFRINFWKTTLYW 81

Query: 92  CLLHKPNADVSFDAFWVERKHIWLFYRCMNQNCIWIAKDDGIYLRNNPDNFDELIHNWGE 151
           C +HKPNADVSFD+FWVE+ HIWL YRC +  CIW AKDDGIYLRN P+N DEL+H W  
Sbjct: 82  CFMHKPNADVSFDSFWVEKTHIWLTYRCKDGICIWTAKDDGIYLRNIPNNDDELVHKW-N 141

Query: 152 TKL 154
           TKL
Sbjct: 142 TKL 143

[Close]

BLAST of Cmc01g0024871 vs. NCBI nr
Match: XP_023514588.1 (S-protein homolog 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 200.3 bits (508), Expect = 1.2e-47
Identity = 88/137 (64.23%), Postives = 105/137 (76.64%), Query Frame = 0


Query: 14  LFGLV--LIQQPLLFAKGSRIPLPLQKWHVHVVNGLTNDTLSVHCKSKDDDLGPHNLLSI 73
           L GL+   + QPL  A G    +P+QKW VHVVN L N TL VHCKSKDDDLG HNL+ +
Sbjct: 43  LLGLLASALTQPLAMAIGI---VPIQKWRVHVVNRLNNATLFVHCKSKDDDLGFHNLVGV 102

Query: 74  GAEFQWSFKINVWRTTLYWCLLHKPNADVSFDAFWVERKHIWLFYRCMNQNCIWIAKDDG 133
           G+EFQWSFK N+W TTL+WCLL KPNA VSF+AFW+E+ HIWL YRC   NCIW A++DG
Sbjct: 103 GSEFQWSFKNNLWATTLFWCLLRKPNAYVSFEAFWIEKTHIWLNYRCHGGNCIWTAREDG 162

Query: 134 IYLRNNPDNFDELIHNW 149
           +YLRNNPD+ DE +H W
Sbjct: 163 VYLRNNPDSVDERVHKW 176

[Close]

BLAST of Cmc01g0024871 vs. NCBI nr
Match: XP_022959899.1 (S-protein homolog 1-like [Cucurbita moschata])

HSP 1 Score: 199.9 bits (507), Expect = 1.6e-47
Identity = 88/137 (64.23%), Postives = 104/137 (75.91%), Query Frame = 0


Query: 14  LFGLV--LIQQPLLFAKGSRIPLPLQKWHVHVVNGLTNDTLSVHCKSKDDDLGPHNLLSI 73
           L GL+   + QPL  A G    +P+Q W VHVVN L N TL VHCKSKDDDLG HNL+ +
Sbjct: 60  LLGLLASALTQPLAMAIGI---VPIQNWRVHVVNRLNNATLFVHCKSKDDDLGFHNLVGV 119

Query: 74  GAEFQWSFKINVWRTTLYWCLLHKPNADVSFDAFWVERKHIWLFYRCMNQNCIWIAKDDG 133
           G+EFQWSFK N+W TTL+WCLL KPNA VSF+AFW+E+ HIWL YRC   NCIW A+DDG
Sbjct: 120 GSEFQWSFKNNLWATTLFWCLLRKPNAYVSFEAFWIEKTHIWLNYRCHGGNCIWTARDDG 179

Query: 134 IYLRNNPDNFDELIHNW 149
           +YLRNNPD+ DE +H W
Sbjct: 180 VYLRNNPDSVDERVHKW 193

[Close]

BLAST of Cmc01g0024871 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.4e-22
Identity = 56/148 (37.84%), Postives = 81/148 (54.73%), Query Frame = 0


Query: 6   VRMVYSVVLFGLVLIQQPLLFAKGSR----IPLPLQKWHVHVVNGL-TNDTLSVHCKSKD 65
           ++     + F L L  Q  +   G+     I   + +W V VVNGL T +TL +HCKSK+
Sbjct: 4   IKQFLLAICFSLALTCQDHVLVGGTTTRDIIVPKISEWQVTVVNGLTTGETLFIHCKSKE 63

Query: 66  DDLGPHNLLSIGAEFQWSFKINVWRTTLYWCLLHKPNADVSFDAFWVERKHIWLFYRCMN 125
           DDLG  N L     F W+F  N+  +T +WC ++K N  ++ + FW +   + LF+RC  
Sbjct: 64  DDLGEIN-LKFRNRFSWNFGENMLHSTFFWCYMNKDNGHMNVNVFWDD---VILFHRCGW 123

Query: 126 QNCIWIAKDDGIYLRNNPDNFDELIHNW 149
           +NCIW AK DG+YL N+    D L   W
Sbjct: 124 KNCIWTAKTDGLYLWNSASGEDVLSRKW 147

[Close]

BLAST of Cmc01g0024871 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 7.0e-22
Identity = 56/149 (37.58%), Postives = 86/149 (57.72%), Query Frame = 0


Query: 5   YVRMVYSVVLFGLVLIQQPLLFAKGSR---IPLP-LQKWHVHVVNGL-TNDTLSVHCKSK 64
           Y++     + F LVL  Q  + A+ +    I +P + +W V V NGL T +TL +HCKSK
Sbjct: 3   YIKQFILAICFYLVLTCQDHVLARDTTTRDIVVPKISEWQVTVANGLTTGETLFIHCKSK 62

Query: 65  DDDLGPHNLLSIGAEFQWSFKINVWRTTLYWCLLHKPNADVSFDAFWVERKHIWLFYRCM 124
           ++DLG  NL  +   F W+F  N+  +TL+WC + K +  ++   FW +   + LF+RC 
Sbjct: 63  ENDLGDINLKFLD-RFSWNFGENMLHSTLFWCYMSKDDGHMNVKVFWDD---VILFHRCD 122

Query: 125 NQNCIWIAKDDGIYLRNNPDNFDELIHNW 149
            +NC+W AK+DG+YL N+    D L   W
Sbjct: 123 WKNCVWTAKNDGLYLWNSAIGEDVLSEKW 147

[Close]

BLAST of Cmc01g0024871 vs. ExPASy Swiss-Prot
Match: P0DN92 (S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.2e-10
Identity = 48/146 (32.88%), Postives = 70/146 (47.95%), Query Frame = 0


Query: 5   YVRMVYSVVLFGLVLIQQPLLFAKGSRIPLPLQKWHVHVVNGLTND-TLSVHCKSKDDDL 64
           Y   ++ V +  + LI    L  + ++ P+      V + N   ND  L +HCKS+DDDL
Sbjct: 12  YFCSIFIVSIVVISLICSEALQIQEAKEPIRGHLTRVTIQN--DNDYLLGIHCKSRDDDL 71

Query: 65  GPHNLLSIGAEFQWSFKINVWRTTLYWCLLHKPNADVS-FDAFWVERKHIWLFYRCMNQN 124
           G H +L+ G  F W F +N   +TLY+C   +       F+ +   R     FYRC   N
Sbjct: 72  GFH-ILAKGELFGWKFHVNFCYSTLYFCGFSQGQMKKGVFEIYRANRD----FYRC--AN 131

Query: 125 CIWIAKDDGIYLRNNPDNFDELIHNW 149
           C W A+ DGIY  +       L +NW
Sbjct: 132 CTWKAEKDGIYGYSEDPVKGYLFYNW 148

[Close]

BLAST of Cmc01g0024871 vs. ExPASy Swiss-Prot
Match: Q9FI84 (S-protein homolog 27 OS=Arabidopsis thaliana OX=3702 GN=SPH27 PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.6e-10
Identity = 40/107 (37.38%), Postives = 54/107 (50.47%), Query Frame = 0


Query: 33  PLPLQKWHVHVVNGLTND-TLSVHCKSKDDDLGPHNLLSIGAEFQWSFKINVWRTTLYWC 92
           P P++     +     ND  L +HCKSKDDDLG H +   G  + W F +N   +TLY+C
Sbjct: 39  PFPIRGPLTRITVKNNNDYLLGIHCKSKDDDLGFH-IHKEGELYGWKFHVNFQNSTLYFC 98

Query: 93  LLHKPNADVS-FDAFWVERKHIWLFYRCMNQNCIWIAKDDGIYLRNN 138
              +   +   FD    ER     FYRC  +NC W AK D +Y  +N
Sbjct: 99  GFSQGQDNKGVFDIDRAERD----FYRC--RNCTWNAKKDSLYGYSN 138

[Close]

BLAST of Cmc01g0024871 vs. ExPASy Swiss-Prot
Match: Q9FI83 (S-protein homolog 28 OS=Arabidopsis thaliana OX=3702 GN=SPH28 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.4e-09
Identity = 41/144 (28.47%), Postives = 70/144 (48.61%), Query Frame = 0


Query: 9   VYSVVLFGLVLIQQPLLFAKGSRIPLPLQKWHVHV----VNGLTNDTLSVHCKSKDDDLG 68
           V S+ +  +V+I   L+ ++  +I    + +  H+    +    +  L++HCKS+DDDLG
Sbjct: 13  VCSIFIMSIVVIS--LICSEALQIQQAKEPFRGHLTRVTIQNYNDYLLAIHCKSRDDDLG 72

Query: 69  PHNLLSIGAEFQWSFKINVWRTTLYWCLLHKPNADVSFDAFWVERKHIWLFYRCMNQNCI 128
            H +L+ G  F W F +N   +TL +C   +   +      +V  +    FYRC   NC 
Sbjct: 73  FH-ILAKGELFGWKFHVNFRYSTLCFCGFSQRQINKGVFIIYVASRD---FYRC--ANCT 132

Query: 129 WIAKDDGIYLRNNPDNFDELIHNW 149
           W A+ DG +   +      L +NW
Sbjct: 133 WKAEKDGFHGYGDIPTRGYLFYNW 148

[Close]

BLAST of Cmc01g0024871 vs. ExPASy TrEMBL
Match: A0A6J1L0E8 (S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111497942 PE=3 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 1.8e-49
Identity = 94/153 (61.44%), Postives = 112/153 (73.20%), Query Frame = 0


Query: 1   MDSRYVR---MVYSVVLFGLV--LIQQPLLFAKGSRIPLPLQKWHVHVVNGLTNDTLSVH 60
           M S Y++   +  +  L GL+   + QPL  A G    +P+QKW VHVVN L N TL VH
Sbjct: 44  MSSTYMKKRHLKAAAFLLGLLASALTQPLAMALGI---VPIQKWRVHVVNRLNNATLFVH 103

Query: 61  CKSKDDDLGPHNLLSIGAEFQWSFKINVWRTTLYWCLLHKPNADVSFDAFWVERKHIWLF 120
           CKSKDDDLG HNL+ IG+EFQWSFK N+W TTL+WCLL KPNA VSF+AFW+E+ HIWL 
Sbjct: 104 CKSKDDDLGFHNLVGIGSEFQWSFKNNLWATTLFWCLLRKPNAYVSFEAFWIEKTHIWLN 163

Query: 121 YRCMNQNCIWIAKDDGIYLRNNPDNFDELIHNW 149
           YRC  +NCIW AKDDG+YLRNNPD  DE +H W
Sbjct: 164 YRCYGRNCIWTAKDDGVYLRNNPDGVDERVHKW 193

[Close]

BLAST of Cmc01g0024871 vs. ExPASy TrEMBL
Match: A0A6J1DPJ1 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111022329 PE=3 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 2.6e-48
Identity = 85/123 (69.11%), Postives = 102/123 (82.93%), Query Frame = 0


Query: 32  IPLPLQKWHVHVVNGLTND-TLSVHCKSKDDDLGPHNLLSIGAEFQWSFKINVWRTTLYW 91
           +P+PL KW++HVVNGL+N+ TL VHCKSKDDDLG H+L+  G E QW+F+IN W+TTLYW
Sbjct: 22  LPMPLDKWNIHVVNGLSNNATLFVHCKSKDDDLGYHHLIGRGDELQWTFRINFWKTTLYW 81

Query: 92  CLLHKPNADVSFDAFWVERKHIWLFYRCMNQNCIWIAKDDGIYLRNNPDNFDELIHNWGE 151
           C +HKPNADVSFD+FWVE+ HIWL YRC +  CIW AKDDGIYLRN P+N DEL+H W  
Sbjct: 82  CFMHKPNADVSFDSFWVEKTHIWLTYRCKDGICIWTAKDDGIYLRNIPNNDDELVHKW-N 141

Query: 152 TKL 154
           TKL
Sbjct: 142 TKL 143

[Close]

BLAST of Cmc01g0024871 vs. ExPASy TrEMBL
Match: A0A6J1H9E9 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111460817 PE=3 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 7.7e-48
Identity = 88/137 (64.23%), Postives = 104/137 (75.91%), Query Frame = 0


Query: 14  LFGLV--LIQQPLLFAKGSRIPLPLQKWHVHVVNGLTNDTLSVHCKSKDDDLGPHNLLSI 73
           L GL+   + QPL  A G    +P+Q W VHVVN L N TL VHCKSKDDDLG HNL+ +
Sbjct: 60  LLGLLASALTQPLAMAIGI---VPIQNWRVHVVNRLNNATLFVHCKSKDDDLGFHNLVGV 119

Query: 74  GAEFQWSFKINVWRTTLYWCLLHKPNADVSFDAFWVERKHIWLFYRCMNQNCIWIAKDDG 133
           G+EFQWSFK N+W TTL+WCLL KPNA VSF+AFW+E+ HIWL YRC   NCIW A+DDG
Sbjct: 120 GSEFQWSFKNNLWATTLFWCLLRKPNAYVSFEAFWIEKTHIWLNYRCHGGNCIWTARDDG 179

Query: 134 IYLRNNPDNFDELIHNW 149
           +YLRNNPD+ DE +H W
Sbjct: 180 VYLRNNPDSVDERVHKW 193

[Close]

BLAST of Cmc01g0024871 vs. ExPASy TrEMBL
Match: A0A6J1CPC6 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013506 PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 1.3e-47
Identity = 81/113 (71.68%), Postives = 94/113 (83.19%), Query Frame = 0


Query: 36  LQKWHVHVVNGLTNDTLSVHCKSKDDDLGPHNLLSIGAEFQWSFKINVWRTTLYWCLLHK 95
           L KWH+HVVNGL+  TL VHCKSKDDDLG HNL++ G EFQW+F++N W TTLYWC L K
Sbjct: 35  LPKWHIHVVNGLSKVTLFVHCKSKDDDLGVHNLVTRGDEFQWTFQVNFWATTLYWCYLKK 94

Query: 96  PNADVSFDAFWVERKHIWLFYRCMNQNCIWIAKDDGIYLRNNPDNFDELIHNW 149
           PNADVSF++FWVE+ H+WL YRC ++NCIW AKDDGIYLRNNPD  DE IH W
Sbjct: 95  PNADVSFESFWVEQTHMWLQYRCTDKNCIWTAKDDGIYLRNNPDGVDERIHEW 147

[Close]

BLAST of Cmc01g0024871 vs. ExPASy TrEMBL
Match: A0A5A7VL75 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G001560 PE=3 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 2.7e-45
Identity = 85/146 (58.22%), Postives = 106/146 (72.60%), Query Frame = 0


Query: 5   YVRMVYSVVLFGLVLIQQPLLFAKGSRIPLPLQKWHVHVVNGLTNDTLSVHCKSKDDDLG 64
           Y   +  VV+  LVL+   ++    + +PLPL KW +HVVNGL N+TL VHCKSKDDDLG
Sbjct: 2   YEEKMNLVVVILLVLVAVAVV-QPCTAVPLPLPKWRIHVVNGLNNETLLVHCKSKDDDLG 61

Query: 65  PHNLLSIGAEFQWSFKINVWRTTLYWCLLHKPNADVSFDAFWVERKHIWLFYRCMNQNCI 124
            HNL+S G EFQW+FK+N + TTL+WC L KPN  VSF++FWVE+ H WL  RC + +CI
Sbjct: 62  IHNLVSKGEEFQWTFKVNFFGTTLFWCYLQKPNFSVSFESFWVEKSHPWLNSRCFHNDCI 121

Query: 125 WIAKDDGIYLRNNPDNFDELIHNWGE 151
           WIAKDD +YLRNN DN DE IH W +
Sbjct: 122 WIAKDDAVYLRNNLDNVDERIHEWNK 146

[Close]

BLAST of Cmc01g0024871 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 )

HSP 1 Score: 107.5 bits (267), Expect = 1.0e-23
Identity = 56/148 (37.84%), Postives = 81/148 (54.73%), Query Frame = 0


Query: 6   VRMVYSVVLFGLVLIQQPLLFAKGSR----IPLPLQKWHVHVVNGL-TNDTLSVHCKSKD 65
           ++     + F L L  Q  +   G+     I   + +W V VVNGL T +TL +HCKSK+
Sbjct: 4   IKQFLLAICFSLALTCQDHVLVGGTTTRDIIVPKISEWQVTVVNGLTTGETLFIHCKSKE 63

Query: 66  DDLGPHNLLSIGAEFQWSFKINVWRTTLYWCLLHKPNADVSFDAFWVERKHIWLFYRCMN 125
           DDLG  N L     F W+F  N+  +T +WC ++K N  ++ + FW +   + LF+RC  
Sbjct: 64  DDLGEIN-LKFRNRFSWNFGENMLHSTFFWCYMNKDNGHMNVNVFWDD---VILFHRCGW 123

Query: 126 QNCIWIAKDDGIYLRNNPDNFDELIHNW 149
           +NCIW AK DG+YL N+    D L   W
Sbjct: 124 KNCIWTAKTDGLYLWNSASGEDVLSRKW 147

[Close]

BLAST of Cmc01g0024871 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 105.1 bits (261), Expect = 5.0e-23
Identity = 56/149 (37.58%), Postives = 86/149 (57.72%), Query Frame = 0


Query: 5   YVRMVYSVVLFGLVLIQQPLLFAKGSR---IPLP-LQKWHVHVVNGL-TNDTLSVHCKSK 64
           Y++     + F LVL  Q  + A+ +    I +P + +W V V NGL T +TL +HCKSK
Sbjct: 3   YIKQFILAICFYLVLTCQDHVLARDTTTRDIVVPKISEWQVTVANGLTTGETLFIHCKSK 62

Query: 65  DDDLGPHNLLSIGAEFQWSFKINVWRTTLYWCLLHKPNADVSFDAFWVERKHIWLFYRCM 124
           ++DLG  NL  +   F W+F  N+  +TL+WC + K +  ++   FW +   + LF+RC 
Sbjct: 63  ENDLGDINLKFLD-RFSWNFGENMLHSTLFWCYMSKDDGHMNVKVFWDD---VILFHRCD 122

Query: 125 NQNCIWIAKDDGIYLRNNPDNFDELIHNW 149
            +NC+W AK+DG+YL N+    D L   W
Sbjct: 123 WKNCVWTAKNDGLYLWNSAIGEDVLSEKW 147

[Close]

BLAST of Cmc01g0024871 vs. TAIR 10
Match: AT5G04347.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 77.0 bits (188), Expect = 1.4e-14
Identity = 41/109 (37.61%), Postives = 60/109 (55.05%), Query Frame = 0


Query: 43  VVNGLTNDTLSVHCKSKDDDLGPHNLLSIGAEFQWSFKINVWRTTLYWCLLHKP---NAD 102
           V N L N  L V C+SKDD+LG H +L +G   + +F  NVWR TL+WC L K       
Sbjct: 26  VKNELNNKVLGVRCRSKDDNLGDH-ILRVGQMTKNNFDDNVWRRTLFWCNLWKGPDFKLH 85

Query: 103 VSFDAFWVERKHIWLFYRCMNQNCIWIAKDDGIYLRNNPDNFDELIHNW 149
           V+FDA+  + K        +    +WIA++DGIY   +P+   +  ++W
Sbjct: 86  VAFDAYRSQWK------ADIGPRYLWIAREDGIYYTQHPETPPKKKYDW 127

[Close]

BLAST of Cmc01g0024871 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 69.3 bits (168), Expect = 3.0e-12
Identity = 33/83 (39.76%), Postives = 52/83 (62.65%), Query Frame = 0


Query: 52  LSVHCKSKDDDLGPHNLLSIGAEFQWSFKINVWRTTLYWCLLHK-PNADVSFDAFWVERK 111
           L VHC+SKDDDLG H +L IG +++++F  N+W+TT + C + + PN     D  +V  +
Sbjct: 41  LKVHCRSKDDDLGEH-ILKIGQDYEFTFGDNIWQTTSFSCQMDQGPNFKHHLD--FVAYE 100

Query: 112 HIWLFYRCMNQNCIWIAKDDGIY 134
             W   + +  +C WI ++DGIY
Sbjct: 101 TSW--SKALEASCKWIGREDGIY 118

[Close]

BLAST of Cmc01g0024871 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 63.9 bits (154), Expect = 1.3e-10
Identity = 38/118 (32.20%), Postives = 57/118 (48.31%), Query Frame = 0


Query: 35  PLQKWHVHVVNGLTND-TLSVHCKSKDDDLGPHNLLSIGAEFQWSFKINVWRTTLYWCLL 94
           P  K  V + N L N  TL  HCKSKDDDLG +  L  G  + +SF    +  TLY+C  
Sbjct: 44  PTSKRTVEINNDLGNQLTLLYHCKSKDDDLG-NRTLQPGESWSFSFGRQFFGRTLYFCSF 103

Query: 95  HKPNADVSFDAFWVERKHIWLFYRCMNQNCIWIAKDDGIYLRNNPDNFDELIHNWGET 152
             PN   SFD  + + +      +C +  C+W  + +G    N+     +L + W ++
Sbjct: 104 SWPNESHSFD-IYKDHRDSGGDNKCESDRCVWKIRRNGPCRFNDETKQFDLCYPWNKS 159

The following BLAST results are available for this feature:

BLAST of Cmc01g0024871 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896407.1	2.7e-71	79.22	S-protein homolog 1-like [Benincasa hispida]	[more]
XP_023004728.1	3.8e-49	61.44	S-protein homolog 1-like [Cucurbita maxima]	[more]
XP_022155194.1	5.5e-48	69.11	S-protein homolog 1-like [Momordica charantia]	[more]
XP_023514588.1	1.2e-47	64.23	S-protein homolog 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022959899.1	1.6e-47	64.23	S-protein homolog 1-like [Cucurbita moschata]	[more]

BLAST of Cmc01g0024871 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JLS0	1.4e-22	37.84	S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1	[more]
Q2HQ46	7.0e-22	37.58	S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1	[more]
P0DN92	1.2e-10	32.88	S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1	[more]
Q9FI84	3.6e-10	37.38	S-protein homolog 27 OS=Arabidopsis thaliana OX=3702 GN=SPH27 PE=2 SV=1	[more]
Q9FI83	1.4e-09	28.47	S-protein homolog 28 OS=Arabidopsis thaliana OX=3702 GN=SPH28 PE=3 SV=1	[more]

BLAST of Cmc01g0024871 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1L0E8	1.8e-49	61.44	S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111497942 PE=3 SV=1	[more]
A0A6J1DPJ1	2.6e-48	69.11	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111022329 PE=3 SV=1	[more]
A0A6J1H9E9	7.7e-48	64.23	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111460817 PE=3 SV=1	[more]
A0A6J1CPC6	1.3e-47	71.68	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013506 PE=3 SV=1	[more]
A0A5A7VL75	2.7e-45	58.22	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G00...	[more]

BLAST of Cmc01g0024871 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16295.1	1.0e-23	37.84	S-protein homologue 1	[more]
AT4G29035.1	5.0e-23	37.58	Plant self-incompatibility protein S1 family	[more]
AT5G04347.1	1.4e-14	37.61	Plant self-incompatibility protein S1 family	[more]
AT5G04350.1	3.0e-12	39.76	Plant self-incompatibility protein S1 family	[more]
AT4G16195.1	1.3e-10	32.20	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 40..148 e-value: 7.6E-26 score: 90.7
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 36..150
None	No IPR available	PANTHER	PTHR31232:SF99	SUBFAMILY NOT NAMED	coord: 36..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc01g0024871.1	Cmc01g0024871.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0060320	rejection of self pollen
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016020	membrane