Cmc01g0024761 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc01g0024761
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Beta-galactosidase
Location	CMiso1.1chr01: 25321640 .. 25322110 (-)
RNA-Seq Expression	Cmc01g0024761
Synteny	Cmc01g0024761

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATGTTGGATGTCGTCCTGCTGATACTCCTATTGAGTTCAACTATAAACTAGGAAACTCTGATGATCAAGTTCCAATTGATAAAGAACAATATCAGCGCCTTGTAGGTAAATTAATTTACTTATCCCATACTTGTTCTGATATTTTCTTTGCTATGAGTGTTGTTAACCAGTTTATGAAGACTTCTTATGAGAAACATATGGAAGCTGTTAACAAAATTTTGAGATACTTGAAAAATACACCTGGTAAAGGATTGATGTTTAGAAAAAAAAATAGAAAGACCATTGAGGTATATACTAACTCGGATTGGACAGGATCTGTTGTTGACAGAAAATCTACATCCGATTATTGTACCTTTGTTTGGGGCAATCGTGTAACTTGGAGGAATAAGAAGCAAAGTGTTGTGGCCAGAAACAATGCTGAGGCTGAATACAGAGCTATGAGTTTGGGAATATGTGAAGAAATTTAG

mRNA sequence

ATGTATGTTGGATGTCGTCCTGCTGATACTCCTATTGAGTTCAACTATAAACTAGGAAACTCTGATGATCAAGTTCCAATTGATAAAGAACAATATCAGCGCCTTGTAGGTAAATTAATTTACTTATCCCATACTTGTTCTGATATTTTCTTTGCTATGAGTGTTGTTAACCAGTTTATGAAGACTTCTTATGAGAAACATATGGAAGCTGTTAACAAAATTTTGAGATACTTGAAAAATACACCTGGTAAAGGATTGATGTTTAGAAAAAAAAATAGAAAGACCATTGAGGTATATACTAACTCGGATTGGACAGGATCTGTTGTTGACAGAAAATCTACATCCGATTATTGTACCTTTGTTTGGGGCAATCGTGTAACTTGGAGGAATAAGAAGCAAAGTGTTGTGGCCAGAAACAATGCTGAGGCTGAATACAGAGCTATGAGTTTGGGAATATGTGAAGAAATTTAG

Coding sequence (CDS)

ATGTATGTTGGATGTCGTCCTGCTGATACTCCTATTGAGTTCAACTATAAACTAGGAAACTCTGATGATCAAGTTCCAATTGATAAAGAACAATATCAGCGCCTTGTAGGTAAATTAATTTACTTATCCCATACTTGTTCTGATATTTTCTTTGCTATGAGTGTTGTTAACCAGTTTATGAAGACTTCTTATGAGAAACATATGGAAGCTGTTAACAAAATTTTGAGATACTTGAAAAATACACCTGGTAAAGGATTGATGTTTAGAAAAAAAAATAGAAAGACCATTGAGGTATATACTAACTCGGATTGGACAGGATCTGTTGTTGACAGAAAATCTACATCCGATTATTGTACCTTTGTTTGGGGCAATCGTGTAACTTGGAGGAATAAGAAGCAAAGTGTTGTGGCCAGAAACAATGCTGAGGCTGAATACAGAGCTATGAGTTTGGGAATATGTGAAGAAATTTAG

Protein sequence

MYVGCRPADTPIEFNYKLGNSDDQVPIDKEQYQRLVGKLIYLSHTCSDIFFAMSVVNQFMKTSYEKHMEAVNKILRYLKNTPGKGLMFRKKNRKTIEVYTNSDWTGSVVDRKSTSDYCTFVWGNRVTWRNKKQSVVARNNAEAEYRAMSLGICEEI

Homology

[Close]

BLAST of Cmc01g0024761 vs. NCBI nr
Match: TYJ99952.1 (Beta-galactosidase [Cucumis melo var. makuwa] >TYK02395.1 Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 276.6 bits (706), Expect = 1.4e-70
Identity = 132/154 (85.71%), Postives = 143/154 (92.86%), Query Frame = 0


Query: 3    VGCRPADTPIEFNYKLGNSDDQVPIDKEQYQRLVGKLIYLSHTCSDIFFAMSVVNQFMKT 62
            +GCRPADTPIEFN KLGNSDDQVP+DKEQYQRLVGKLIYLSHT  DI FA+SVV+QFM+ 
Sbjct: 1354 LGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQA 1413

Query: 63   SYEKHMEAVNKILRYLKNTPGKGLMFRKKNRKTIEVYTNSDWTGSVVDRKSTSDYCTFVW 122
             YEKHMEAVN+ILRYLKNTPGKGLMFRK NRKTIE YT+SDW GSV+DRKSTS YCTFVW
Sbjct: 1414 PYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFVW 1473

Query: 123  GNRVTWRNKKQSVVARNNAEAEYRAMSLGICEEI 157
            GN VTWR+KKQSVVAR++AEAEYRAMSLGICEEI
Sbjct: 1474 GNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEI 1507

[Close]

BLAST of Cmc01g0024761 vs. NCBI nr
Match: TYK08054.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 276.6 bits (706), Expect = 1.4e-70
Identity = 132/154 (85.71%), Postives = 143/154 (92.86%), Query Frame = 0


Query: 3    VGCRPADTPIEFNYKLGNSDDQVPIDKEQYQRLVGKLIYLSHTCSDIFFAMSVVNQFMKT 62
            +GCRPADTPIEFN KLGNSDDQVP+DKEQYQRLVGKLIYLSHT  DI FA+SVV+QFM+ 
Sbjct: 1354 LGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQA 1413

Query: 63   SYEKHMEAVNKILRYLKNTPGKGLMFRKKNRKTIEVYTNSDWTGSVVDRKSTSDYCTFVW 122
             YEKHMEAVN+ILRYLKNTPGKGLMFRK NRKTIE YT+SDW GSV+DRKSTS YCTFVW
Sbjct: 1414 PYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFVW 1473

Query: 123  GNRVTWRNKKQSVVARNNAEAEYRAMSLGICEEI 157
            GN VTWR+KKQSVVAR++AEAEYRAMSLGICEEI
Sbjct: 1474 GNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEI 1507

[Close]

BLAST of Cmc01g0024761 vs. NCBI nr
Match: KAA0048203.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 276.6 bits (706), Expect = 1.4e-70
Identity = 132/154 (85.71%), Postives = 143/154 (92.86%), Query Frame = 0


Query: 3    VGCRPADTPIEFNYKLGNSDDQVPIDKEQYQRLVGKLIYLSHTCSDIFFAMSVVNQFMKT 62
            +GCRPADTPIEFN KLGNSDDQVP+DKEQYQRLVGKLIYLSHT  DI FA+SVV+QFM+ 
Sbjct: 1354 LGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQA 1413

Query: 63   SYEKHMEAVNKILRYLKNTPGKGLMFRKKNRKTIEVYTNSDWTGSVVDRKSTSDYCTFVW 122
             YEKHMEAVN+ILRYLKNTPGKGLMFRK NRKTIE YT+SDW GSV+DRKSTS YCTFVW
Sbjct: 1414 PYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFVW 1473

Query: 123  GNRVTWRNKKQSVVARNNAEAEYRAMSLGICEEI 157
            GN VTWR+KKQSVVAR++AEAEYRAMSLGICEEI
Sbjct: 1474 GNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEI 1507

[Close]

BLAST of Cmc01g0024761 vs. NCBI nr
Match: KAA0025363.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 276.6 bits (706), Expect = 1.4e-70
Identity = 132/154 (85.71%), Postives = 143/154 (92.86%), Query Frame = 0


Query: 3    VGCRPADTPIEFNYKLGNSDDQVPIDKEQYQRLVGKLIYLSHTCSDIFFAMSVVNQFMKT 62
            +GCRPADTPIEFN KLGNSDDQVP+DKEQYQRLVGKLIYLSHT  DI FA+SVV+QFM+ 
Sbjct: 1386 LGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQA 1445

Query: 63   SYEKHMEAVNKILRYLKNTPGKGLMFRKKNRKTIEVYTNSDWTGSVVDRKSTSDYCTFVW 122
             YEKHMEAVN+ILRYLKNTPGKGLMFRK NRKTIE YT+SDW GSV+DRKSTS YCTFVW
Sbjct: 1446 PYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFVW 1505

Query: 123  GNRVTWRNKKQSVVARNNAEAEYRAMSLGICEEI 157
            GN VTWR+KKQSVVAR++AEAEYRAMSLGICEEI
Sbjct: 1506 GNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEI 1539

[Close]

BLAST of Cmc01g0024761 vs. NCBI nr
Match: KAA0034386.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 276.6 bits (706), Expect = 1.4e-70
Identity = 132/154 (85.71%), Postives = 143/154 (92.86%), Query Frame = 0


Query: 3    VGCRPADTPIEFNYKLGNSDDQVPIDKEQYQRLVGKLIYLSHTCSDIFFAMSVVNQFMKT 62
            +GCRPADTPIEFN KLGNSDDQVP+DKEQYQRLVGKLIYLSHT  DI FA+SVV+QFM+ 
Sbjct: 1411 LGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQA 1470

Query: 63   SYEKHMEAVNKILRYLKNTPGKGLMFRKKNRKTIEVYTNSDWTGSVVDRKSTSDYCTFVW 122
             YEKHMEAVN+ILRYLKNTPGKGLMFRK NRKTIE YT+SDW GSV+DRKSTS YCTFVW
Sbjct: 1471 PYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFVW 1530

Query: 123  GNRVTWRNKKQSVVARNNAEAEYRAMSLGICEEI 157
            GN VTWR+KKQSVVAR++AEAEYRAMSLGICEEI
Sbjct: 1531 GNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEI 1564

[Close]

BLAST of Cmc01g0024761 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 3.2e-22
Identity = 51/147 (34.69%), Postives = 88/147 (59.86%), Query Frame = 0


Query: 3    VGCRPADTPIEFNYKLGNSDDQVPIDKEQYQRLVGKLIYLSHTCSDIFFAMSVVNQFMKT 62
            +  +P  TP+  + KL         D  +Y+ +VG L YL+ T  DI +A++ ++QFM  
Sbjct: 1216 ITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQFMHM 1275

Query: 63   SYEKHMEAVNKILRYLKNTPGKGLMFRKKNRKTIEVYTNSDWTGSVVDRKSTSDYCTFVW 122
              E+H++A+ +ILRYL  TP  G+  +K N  ++  Y+++DW G   D  ST+ Y  ++ 
Sbjct: 1276 PTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLG 1335

Query: 123  GNRVTWRNKKQSVVARNNAEAEYRAMS 150
             + ++W +KKQ  V R++ EAEYR+++
Sbjct: 1336 HHPISWSSKKQKGVVRSSTEAEYRSVA 1362

[Close]

BLAST of Cmc01g0024761 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.7e-20
Identity = 50/150 (33.33%), Postives = 84/150 (56.00%), Query Frame = 0


Query: 5   CRPADTPIEFNYKLGNSDDQVPIDKEQYQRLVGKLIYLSHTCSDIFFAMSVVNQFMKTSY 64
           C+P  TP+        S  + P D   ++ +VG L YL+ T  DI +A+++V Q M    
Sbjct: 74  CKPMSTPLPLKLNSSVSTAKYP-DPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPT 133

Query: 65  EKHMEAVNKILRYLKNTPGKGLMFRKKNRKTIEVYTNSDWTGSVVDRKSTSDYCTFVWGN 124
               + + ++LRY+K T   GL   K ++  ++ + +SDW G    R+ST+ +CTF+  N
Sbjct: 134 LADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCN 193

Query: 125 RVTWRNKKQSVVARNNAEAEYRAMSLGICE 155
            ++W  K+Q  V+R++ E EYRA++L   E
Sbjct: 194 IISWSAKRQPTVSRSSTETEYRALALTAAE 222

[Close]

BLAST of Cmc01g0024761 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 3.0e-20
Identity = 49/145 (33.79%), Postives = 89/145 (61.38%), Query Frame = 0


Query: 6    RPADTPIEFNYKLG-NSDDQVPIDKEQYQRLVGKLIYLSHTCSDIFFAMSVVNQFMKTSY 65
            +P  TP+  + KL  +S  ++P D  +Y+ +VG L YL+ T  D+ +A++ ++Q+M    
Sbjct: 1202 KPVATPMATSPKLTLHSGTKLP-DPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPT 1261

Query: 66   EKHMEAVNKILRYLKNTPGKGLMFRKKNRKTIEVYTNSDWTGSVVDRKSTSDYCTFVWGN 125
            + H  A+ ++LRYL  TP  G+  +K N  ++  Y+++DW G   D  ST+ Y  ++  +
Sbjct: 1262 DDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHH 1321

Query: 126  RVTWRNKKQSVVARNNAEAEYRAMS 150
             ++W +KKQ  V R++ EAEYR+++
Sbjct: 1322 PISWSSKKQKGVVRSSTEAEYRSVA 1345

[Close]

BLAST of Cmc01g0024761 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.4e-14
Identity = 45/119 (37.82%), Postives = 69/119 (57.98%), Query Frame = 0


Query: 32  YQRLVGKLIYLS-HTCSDIFFAMSVVNQFMKTSYEKHMEAVNKILRYLKNTPGKGLMFRK 91
           Y   VG ++YL   T  D+  A+ V++QF       H +A+ ++LRYL++T   GL F +
Sbjct: 6   YLSAVGAIMYLMVVTRPDLAAAVGVLSQFASDPCPTHWQALKRVLRYLQSTQTYGLEFTR 65

Query: 92  KNRKTIEVYTNSDWTGSVVDRKSTSDYCTFVWGNRVTWRNKKQSVVARNNAEAEYRAMS 150
                +  Y+++DW G V  R+STS Y   + G  V+WR+KKQ  VA ++ E EY A+S
Sbjct: 66  AGTAKLVGYSDADWAGDVESRRSTSGYLFKLNGGCVSWRSKKQRTVALSSTEDEYMALS 124

[Close]

BLAST of Cmc01g0024761 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 9.3e-14
Identity = 50/149 (33.56%), Postives = 81/149 (54.36%), Query Frame = 0


Query: 6    RPADTPIEFNYKLGNS------DDQVPIDKEQYQRLVGKLIY-LSHTCSDIFFAMSVVNQ 65
            +P  TP+  + KL         +++  + K  Y   VG L+Y +  T  DI  A+ VV++
Sbjct: 1079 KPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSR 1138

Query: 66   FMKTSYEKHMEAVNKILRYLKNTPGKGLMFRKKNRKTIEVYTNSDWTGSVVDRKSTSDYC 125
            F++   ++H EAV  ILRYL+ T G  L F   +   ++ YT++D  G + +RKS++ Y 
Sbjct: 1139 FLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSD-PILKGYTDADMAGDIDNRKSSTGYL 1198

Query: 126  TFVWGNRVTWRNKKQSVVARNNAEAEYRA 148
                G  ++W++K Q  VA +  EAEY A
Sbjct: 1199 FTFSGGAISWQSKLQKCVALSTTEAEYIA 1226

[Close]

BLAST of Cmc01g0024761 vs. ExPASy TrEMBL
Match: A0A5D3BJK7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G001020 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 6.6e-71
Identity = 132/154 (85.71%), Postives = 143/154 (92.86%), Query Frame = 0


Query: 3    VGCRPADTPIEFNYKLGNSDDQVPIDKEQYQRLVGKLIYLSHTCSDIFFAMSVVNQFMKT 62
            +GCRPADTPIEFN KLGNSDDQVP+DKEQYQRLVGKLIYLSHT  DI FA+SVV+QFM+ 
Sbjct: 1354 LGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQA 1413

Query: 63   SYEKHMEAVNKILRYLKNTPGKGLMFRKKNRKTIEVYTNSDWTGSVVDRKSTSDYCTFVW 122
             YEKHMEAVN+ILRYLKNTPGKGLMFRK NRKTIE YT+SDW GSV+DRKSTS YCTFVW
Sbjct: 1414 PYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFVW 1473

Query: 123  GNRVTWRNKKQSVVARNNAEAEYRAMSLGICEEI 157
            GN VTWR+KKQSVVAR++AEAEYRAMSLGICEEI
Sbjct: 1474 GNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEI 1507

[Close]

BLAST of Cmc01g0024761 vs. ExPASy TrEMBL
Match: A0A5D3C4T4 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00040 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 6.6e-71
Identity = 132/154 (85.71%), Postives = 143/154 (92.86%), Query Frame = 0


Query: 3    VGCRPADTPIEFNYKLGNSDDQVPIDKEQYQRLVGKLIYLSHTCSDIFFAMSVVNQFMKT 62
            +GCRPADTPIEFN KLGNSDDQVP+DKEQYQRLVGKLIYLSHT  DI FA+SVV+QFM+ 
Sbjct: 1354 LGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQA 1413

Query: 63   SYEKHMEAVNKILRYLKNTPGKGLMFRKKNRKTIEVYTNSDWTGSVVDRKSTSDYCTFVW 122
             YEKHMEAVN+ILRYLKNTPGKGLMFRK NRKTIE YT+SDW GSV+DRKSTS YCTFVW
Sbjct: 1414 PYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFVW 1473

Query: 123  GNRVTWRNKKQSVVARNNAEAEYRAMSLGICEEI 157
            GN VTWR+KKQSVVAR++AEAEYRAMSLGICEEI
Sbjct: 1474 GNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEI 1507

[Close]

BLAST of Cmc01g0024761 vs. ExPASy TrEMBL
Match: A0A5A7VLQ7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G00690 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 6.6e-71
Identity = 132/154 (85.71%), Postives = 143/154 (92.86%), Query Frame = 0


Query: 3    VGCRPADTPIEFNYKLGNSDDQVPIDKEQYQRLVGKLIYLSHTCSDIFFAMSVVNQFMKT 62
            +GCRPADTPIEFN KLGNSDDQVP+DKEQYQRLVGKLIYLSHT  DI FA+SVV+QFM+ 
Sbjct: 1354 LGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQA 1413

Query: 63   SYEKHMEAVNKILRYLKNTPGKGLMFRKKNRKTIEVYTNSDWTGSVVDRKSTSDYCTFVW 122
             YEKHMEAVN+ILRYLKNTPGKGLMFRK NRKTIE YT+SDW GSV+DRKSTS YCTFVW
Sbjct: 1414 PYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFVW 1473

Query: 123  GNRVTWRNKKQSVVARNNAEAEYRAMSLGICEEI 157
            GN VTWR+KKQSVVAR++AEAEYRAMSLGICEEI
Sbjct: 1474 GNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEI 1507

[Close]

BLAST of Cmc01g0024761 vs. ExPASy TrEMBL
Match: A0A5A7SM64 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold130G00220 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 6.6e-71
Identity = 132/154 (85.71%), Postives = 143/154 (92.86%), Query Frame = 0


Query: 3    VGCRPADTPIEFNYKLGNSDDQVPIDKEQYQRLVGKLIYLSHTCSDIFFAMSVVNQFMKT 62
            +GCRPADTPIEFN KLGNSDDQVP+DKEQYQRLVGKLIYLSHT  DI FA+SVV+QFM+ 
Sbjct: 1354 LGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQA 1413

Query: 63   SYEKHMEAVNKILRYLKNTPGKGLMFRKKNRKTIEVYTNSDWTGSVVDRKSTSDYCTFVW 122
             YEKHMEAVN+ILRYLKNTPGKGLMFRK NRKTIE YT+SDW GSV+DRKSTS YCTFVW
Sbjct: 1414 PYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFVW 1473

Query: 123  GNRVTWRNKKQSVVARNNAEAEYRAMSLGICEEI 157
            GN VTWR+KKQSVVAR++AEAEYRAMSLGICEEI
Sbjct: 1474 GNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEI 1507

[Close]

BLAST of Cmc01g0024761 vs. ExPASy TrEMBL
Match: A0A5D3D7S1 (Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G00430 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 6.6e-71
Identity = 132/154 (85.71%), Postives = 143/154 (92.86%), Query Frame = 0


Query: 3   VGCRPADTPIEFNYKLGNSDDQVPIDKEQYQRLVGKLIYLSHTCSDIFFAMSVVNQFMKT 62
           +GCRPADTPIEFN KLGNSDDQVP+DKEQYQRLVGKLIYLSHT  DI FA+SVV+QFM+ 
Sbjct: 28  LGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQA 87

Query: 63  SYEKHMEAVNKILRYLKNTPGKGLMFRKKNRKTIEVYTNSDWTGSVVDRKSTSDYCTFVW 122
            YEKHMEAVN+ILRYLKNTPGKGLMFRK NRKTIE YT+SDW GSV+DRKSTS YCTFVW
Sbjct: 88  PYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFVW 147

Query: 123 GNRVTWRNKKQSVVARNNAEAEYRAMSLGICEEI 157
           GN VTWR+KKQSVVAR++AEAEYRAMSLGICEEI
Sbjct: 148 GNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEI 181

[Close]

BLAST of Cmc01g0024761 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 112.5 bits (280), Expect = 3.2e-25
Identity = 53/152 (34.87%), Postives = 95/152 (62.50%), Query Frame = 0


Query: 3   VGCRPADTPIEFNYKLGNSDDQVPIDKEQYQRLVGKLIYLSHTCSDIFFAMSVVNQFMKT 62
           +GC+P+  P++ +           +D + Y+RL+G+L+YL  T  DI FA++ ++QF + 
Sbjct: 349 LGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEA 408

Query: 63  SYEKHMEAVNKILRYLKNTPGKGLMFRKKNRKTIEVYTNSDWTGSVVDRKSTSDYCTFVW 122
               H +AV KIL Y+K T G+GL +  +    ++V++++ +      R+ST+ YC F+ 
Sbjct: 409 PRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLG 468

Query: 123 GNRVTWRNKKQSVVARNNAEAEYRAMSLGICE 155
            + ++W++KKQ VV++++AEAEYRA+S    E
Sbjct: 469 TSLISWKSKKQQVVSKSSAEAEYRALSFATDE 500

[Close]

BLAST of Cmc01g0024761 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 100.5 bits (249), Expect = 1.2e-21
Identity = 50/150 (33.33%), Postives = 84/150 (56.00%), Query Frame = 0


Query: 5   CRPADTPIEFNYKLGNSDDQVPIDKEQYQRLVGKLIYLSHTCSDIFFAMSVVNQFMKTSY 64
           C+P  TP+        S  + P D   ++ +VG L YL+ T  DI +A+++V Q M    
Sbjct: 74  CKPMSTPLPLKLNSSVSTAKYP-DPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPT 133

Query: 65  EKHMEAVNKILRYLKNTPGKGLMFRKKNRKTIEVYTNSDWTGSVVDRKSTSDYCTFVWGN 124
               + + ++LRY+K T   GL   K ++  ++ + +SDW G    R+ST+ +CTF+  N
Sbjct: 134 LADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCN 193

Query: 125 RVTWRNKKQSVVARNNAEAEYRAMSLGICE 155
            ++W  K+Q  V+R++ E EYRA++L   E
Sbjct: 194 IISWSAKRQPTVSRSSTETEYRALALTAAE 222

[Close]

BLAST of Cmc01g0024761 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 57.8 bits (138), Expect = 9.2e-09
Identity = 27/82 (32.93%), Postives = 48/82 (58.54%), Query Frame = 0


Query: 40  IYLSHTCSDIFFAMSVVNQFMKTSYEKHMEAVNKILRYLKNTPGKGLMFRKKNRKTIEVY 99
           +YL+ T  D+ FA++ ++QF   S    M+AV K+L Y+K T G+GL +   +   ++ +
Sbjct: 1   MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 100 TNSDWTGSVVDRKSTSDYCTFV 122
            +SDW      R+S + +C+ V
Sbjct: 61  ADSDWASCPDTRRSVTGFCSLV 82

The following BLAST results are available for this feature:

BLAST of Cmc01g0024761 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ99952.1	1.4e-70	85.71	Beta-galactosidase [Cucumis melo var. makuwa] >TYK02395.1 Beta-galactosidase [Cu...	[more]
TYK08054.1	1.4e-70	85.71	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
KAA0048203.1	1.4e-70	85.71	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
KAA0025363.1	1.4e-70	85.71	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
KAA0034386.1	1.4e-70	85.71	Beta-galactosidase [Cucumis melo var. makuwa]	[more]

BLAST of Cmc01g0024761 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	3.2e-22	34.69	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P92519	1.7e-20	33.33	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9ZT94	3.0e-20	33.79	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P0CV72	1.4e-14	37.82	Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P...	[more]
P10978	9.3e-14	33.56	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]

BLAST of Cmc01g0024761 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BJK7	6.6e-71	85.71	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G0...	[more]
A0A5D3C4T4	6.6e-71	85.71	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00...	[more]
A0A5A7VLQ7	6.6e-71	85.71	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G0...	[more]
A0A5A7SM64	6.6e-71	85.71	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold130G0...	[more]
A0A5D3D7S1	6.6e-71	85.71	Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Cucumis melo var. makuwa O...	[more]

BLAST of Cmc01g0024761 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	3.2e-25	34.87	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	1.2e-21	33.33	DNA/RNA polymerases superfamily protein	[more]
ATMG00240.1	9.2e-09	32.93	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 27..147
None	No IPR available	PANTHER	PTHR11439:SF352	SUBFAMILY NOT NAMED	coord: 27..147
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 97..154 e-value: 5.16546E-24 score: 89.0645
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 23..138

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc01g0024761.1	Cmc01g0024761.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0003676	nucleic acid binding