Cmc01g0024341 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc01g0024341
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr01: 24808879 .. 24809745 (+)
RNA-Seq Expression	Cmc01g0024341
Synteny	Cmc01g0024341

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTTTTGTTTGGTTTGCCTCGAACTCCGAGTGGTTATGACAGAATATGGGTGATCGTCGACAGACTTACTAAGACCGCATGTTTCACACCAGTTAAAGTGACATTTAGGCTTGATAAATTAGCCAAATTATACCTTGAAAGGATAGTGAGCCAGTATGGAGTCCCAGTATCGATTGTGTCTGATAGAGATTCGATATTTACTTCCAAGTTTTGGCCTAGGTTACAGAACGCACTTGGAATTAAATTACATTTTAGCATAGCTTTCCATCCTCAAACCGATGGTCAGTCAGAGAGAACCATACAGACTTTTGAAGACATGTTACGGGCATGTGTTTTACAGTTCAAAGGAAGTTGGGATTCTCAACTACCATTGGTGGAATTTGCCTATAATAATAGTTACCATTCTAGTATCGAAATGGCACCATATGAGGCATTGTATGGTCGACGATGTAGAACTTCTGTTTGTTGGGATGAAGTTGGTGAAAGAAAGCTAATGGGGCTAGAATTGGTACGTTCCACCACAGAAAATGTGAAAGTAATCAAGGAAAAATTGAAAATGGCGCAAGATCGACAAAAACATTATGCTGATAAACAACGAAAAGATTTGGAATTTGAGGTTGGTGACAATGTTTTTCTTAAATTGTCACCATGGAAAGGCGTGCTAAGATTCAGAAGGAAGGGGAAACTAAGTCCAAGATATATTGGTCTATATGAAATTATTGAACGAATTGGACCGGTTGCATATCGATTAGCCCCGCCAATGGAACTTTCCAGAATCCATGATGTATTTCATGTATCGATGTTGCGTAAATACGTTCCTGACCCGACACACATCTTAGAATATCAACCAGTGCAGTTATAA

mRNA sequence

ATGGATTTTTTGTTTGGTTTGCCTCGAACTCCGAGTGGTTATGACAGAATATGGGTGATCGTCGACAGACTTACTAAGACCGCATGTTTCACACCAGTTAAAGTGACATTTAGGCTTGATAAATTAGCCAAATTATACCTTGAAAGGATAGTGAGCCAGTATGGAGTCCCAGTATCGATTGTGTCTGATAGAGATTCGATATTTACTTCCAAGTTTTGGCCTAGGTTACAGAACGCACTTGGAATTAAATTACATTTTAGCATAGCTTTCCATCCTCAAACCGATGGTCAGTCAGAGAGAACCATACAGACTTTTGAAGACATGTTACGGGCATGTGTTTTACAGTTCAAAGGAAGTTGGGATTCTCAACTACCATTGGTGGAATTTGCCTATAATAATAGTTACCATTCTAGTATCGAAATGGCACCATATGAGGCATTGTATGGTCGACGATGTAGAACTTCTGTTTGTTGGGATGAAGTTGGTGAAAGAAAGCTAATGGGGCTAGAATTGGTACGTTCCACCACAGAAAATGTGAAAGTAATCAAGGAAAAATTGAAAATGGCGCAAGATCGACAAAAACATTATGCTGATAAACAACGAAAAGATTTGGAATTTGAGGTTGGTGACAATGTTTTTCTTAAATTGTCACCATGGAAAGGCGTGCTAAGATTCAGAAGGAAGGGGAAACTAAGTCCAAGATATATTGGTCTATATGAAATTATTGAACGAATTGGACCGGTTGCATATCGATTAGCCCCGCCAATGGAACTTTCCAGAATCCATGATGTATTTCATGTATCGATGTTGCGTAAATACGTTCCTGACCCGACACACATCTTAGAATATCAACCAGTGCAGTTATAA

Coding sequence (CDS)

ATGGATTTTTTGTTTGGTTTGCCTCGAACTCCGAGTGGTTATGACAGAATATGGGTGATCGTCGACAGACTTACTAAGACCGCATGTTTCACACCAGTTAAAGTGACATTTAGGCTTGATAAATTAGCCAAATTATACCTTGAAAGGATAGTGAGCCAGTATGGAGTCCCAGTATCGATTGTGTCTGATAGAGATTCGATATTTACTTCCAAGTTTTGGCCTAGGTTACAGAACGCACTTGGAATTAAATTACATTTTAGCATAGCTTTCCATCCTCAAACCGATGGTCAGTCAGAGAGAACCATACAGACTTTTGAAGACATGTTACGGGCATGTGTTTTACAGTTCAAAGGAAGTTGGGATTCTCAACTACCATTGGTGGAATTTGCCTATAATAATAGTTACCATTCTAGTATCGAAATGGCACCATATGAGGCATTGTATGGTCGACGATGTAGAACTTCTGTTTGTTGGGATGAAGTTGGTGAAAGAAAGCTAATGGGGCTAGAATTGGTACGTTCCACCACAGAAAATGTGAAAGTAATCAAGGAAAAATTGAAAATGGCGCAAGATCGACAAAAACATTATGCTGATAAACAACGAAAAGATTTGGAATTTGAGGTTGGTGACAATGTTTTTCTTAAATTGTCACCATGGAAAGGCGTGCTAAGATTCAGAAGGAAGGGGAAACTAAGTCCAAGATATATTGGTCTATATGAAATTATTGAACGAATTGGACCGGTTGCATATCGATTAGCCCCGCCAATGGAACTTTCCAGAATCCATGATGTATTTCATGTATCGATGTTGCGTAAATACGTTCCTGACCCGACACACATCTTAGAATATCAACCAGTGCAGTTATAA

Protein sequence

MDFLFGLPRTPSGYDRIWVIVDRLTKTACFTPVKVTFRLDKLAKLYLERIVSQYGVPVSIVSDRDSIFTSKFWPRLQNALGIKLHFSIAFHPQTDGQSERTIQTFEDMLRACVLQFKGSWDSQLPLVEFAYNNSYHSSIEMAPYEALYGRRCRTSVCWDEVGERKLMGLELVRSTTENVKVIKEKLKMAQDRQKHYADKQRKDLEFEVGDNVFLKLSPWKGVLRFRRKGKLSPRYIGLYEIIERIGPVAYRLAPPMELSRIHDVFHVSMLRKYVPDPTHILEYQPVQL

Homology

[Close]

BLAST of Cmc01g0024341 vs. NCBI nr
Match: KAA0026229.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK30722.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 567.0 bits (1460), Expect = 9.3e-158
Identity = 277/288 (96.18%), Postives = 281/288 (97.57%), Query Frame = 0


Query: 1    MDFLFGLPRTPSGYDRIWVIVDRLTKTACFTPVKVTFRLDKLAKLYLERIVSQYGVPVSI 60
            MDFLFGLPRTPSGYD IWVIVDRLTKTACFTPVKVTF LDKLAKLYL+RIVSQYGVPVSI
Sbjct: 838  MDFLFGLPRTPSGYDGIWVIVDRLTKTACFTPVKVTFTLDKLAKLYLDRIVSQYGVPVSI 897

Query: 61   VSDRDSIFTSKFWPRLQNALGIKLHFSIAFHPQTDGQSERTIQTFEDMLRACVLQFKGSW 120
            VSDRDSIFTSKFWPRLQNALGIKLHFS AFHPQTDGQSER+IQTFEDMLRACVLQFKGSW
Sbjct: 898  VSDRDSIFTSKFWPRLQNALGIKLHFSTAFHPQTDGQSERSIQTFEDMLRACVLQFKGSW 957

Query: 121  DSQLPLVEFAYNNSYHSSIEMAPYEALYGRRCRTSVCWDEVGERKLMGLELVRSTTENVK 180
            DSQLPLVEFAYNNSYHSSIEMAPYEALYGRRCRTSVCWDEVGERKLMGLELVRSTTENVK
Sbjct: 958  DSQLPLVEFAYNNSYHSSIEMAPYEALYGRRCRTSVCWDEVGERKLMGLELVRSTTENVK 1017

Query: 181  VIKEKLKMAQDRQKHYADKQRKDLEFEVGDNVFLKLSPWKGVLRFRRKGKLSPRYIGLYE 240
            VIKEKLKMAQD QK+YADK+RKDLEFEVGDNVFLK SPWKGVLRFR KGKLSPRYIGLYE
Sbjct: 1018 VIKEKLKMAQDLQKNYADKERKDLEFEVGDNVFLKFSPWKGVLRFRWKGKLSPRYIGLYE 1077

Query: 241  IIERIGPVAYRLAPPMELSRIHDVFHVSMLRKYVPDPTHILEYQPVQL 289
            IIERIGPVAYRLA PMELSRIHDVFHVSMLRKYVPDPTHILEYQPVQL
Sbjct: 1078 IIERIGPVAYRLALPMELSRIHDVFHVSMLRKYVPDPTHILEYQPVQL 1125

[Close]

BLAST of Cmc01g0024341 vs. NCBI nr
Match: CAA2959003.1 (reverse transcriptase [Olea europaea subsp. europaea])

HSP 1 Score: 469.2 bits (1206), Expect = 2.6e-128
Identity = 223/288 (77.43%), Postives = 251/288 (87.15%), Query Frame = 0


Query: 1   MDFLFGLPRTPSGYDRIWVIVDRLTKTACFTPVKVTFRLDKLAKLYLERIVSQYGVPVSI 60
           MDFLFGLPRT  G+D +WVIVDRLTKTA F P+K T+ L+KLAKLY++ IVS YG P+SI
Sbjct: 533 MDFLFGLPRTQIGHDGVWVIVDRLTKTAKFLPIKATYTLNKLAKLYVDEIVSSYGTPLSI 592

Query: 61  VSDRDSIFTSKFWPRLQNALGIKLHFSIAFHPQTDGQSERTIQTFEDMLRACVLQFKGSW 120
           VSDRD  FTSKFWP LQ A+G KLHFS AFHPQTDGQSERTIQT EDMLRACVL+FKGSW
Sbjct: 593 VSDRDPRFTSKFWPSLQEAMGTKLHFSTAFHPQTDGQSERTIQTLEDMLRACVLEFKGSW 652

Query: 121 DSQLPLVEFAYNNSYHSSIEMAPYEALYGRRCRTSVCWDEVGERKLMGLELVRSTTENVK 180
           DS L L+EFAYNNSYHSSIEMAP+EALYGR+CRT VCWDE G+RKL+G ELV+ T+ENV 
Sbjct: 653 DSHLSLMEFAYNNSYHSSIEMAPFEALYGRKCRTPVCWDEAGKRKLVGPELVQMTSENVN 712

Query: 181 VIKEKLKMAQDRQKHYADKQRKDLEFEVGDNVFLKLSPWKGVLRFRRKGKLSPRYIGLYE 240
           +IKE LK+AQ+RQK YAD++RKDLEF +GD VFLKLSPWKGVLRF ++GKLSPRYIG YE
Sbjct: 713 LIKENLKIAQNRQKSYADRRRKDLEFAIGDKVFLKLSPWKGVLRFGKRGKLSPRYIGPYE 772

Query: 241 IIERIGPVAYRLAPPMELSRIHDVFHVSMLRKYVPDPTHILEYQPVQL 289
           IIERIGPVAYRL  P ELSRIHDVFHVSMLRKY+ DP+H+LE  PV L
Sbjct: 773 IIERIGPVAYRLDLPTELSRIHDVFHVSMLRKYIADPSHVLESHPVHL 820

[Close]

BLAST of Cmc01g0024341 vs. NCBI nr
Match: CAA3011866.1 (DNA RNA polymerases superfamily [Olea europaea subsp. europaea])

HSP 1 Score: 466.5 bits (1199), Expect = 1.7e-127
Identity = 222/288 (77.08%), Postives = 251/288 (87.15%), Query Frame = 0


Query: 1   MDFLFGLPRTPSGYDRIWVIVDRLTKTACFTPVKVTFRLDKLAKLYLERIVSQYGVPVSI 60
           MDFLFGLPRT +G+D +WVIVDRLTK A F P+K+T+ L KLAKLY++ IVS YGVPVSI
Sbjct: 1   MDFLFGLPRTQNGHDGVWVIVDRLTKIARFLPIKITYSLSKLAKLYVDEIVSLYGVPVSI 60

Query: 61  VSDRDSIFTSKFWPRLQNALGIKLHFSIAFHPQTDGQSERTIQTFEDMLRACVLQFKGSW 120
           VSDRD  FTSKFWP LQ A+G KLHFS AFHPQTDGQSERTIQT EDMLRACVL+FKGSW
Sbjct: 61  VSDRDPRFTSKFWPSLQGAMGTKLHFSRAFHPQTDGQSERTIQTLEDMLRACVLEFKGSW 120

Query: 121 DSQLPLVEFAYNNSYHSSIEMAPYEALYGRRCRTSVCWDEVGERKLMGLELVRSTTENVK 180
           D+ L  +EFAYNNSYHSSIEMAP+EALYGR+CRT VCW EVGERKL+G +LV+  +ENVK
Sbjct: 121 DTHLSFMEFAYNNSYHSSIEMAPFEALYGRKCRTPVCWSEVGERKLVGPDLVQMASENVK 180

Query: 181 VIKEKLKMAQDRQKHYADKQRKDLEFEVGDNVFLKLSPWKGVLRFRRKGKLSPRYIGLYE 240
           +I+E LK+AQDR K YADK+RKDLEF VGD VFLKLSPWKGVLRF ++GKLSPRYIG Y+
Sbjct: 181 LIRENLKIAQDRHKSYADKRRKDLEFTVGDKVFLKLSPWKGVLRFGKQGKLSPRYIGPYQ 240

Query: 241 IIERIGPVAYRLAPPMELSRIHDVFHVSMLRKYVPDPTHILEYQPVQL 289
           + ERIGPVAYRL  P ELSRIHDVFHVSMLRKY+ DP+H+LE QPVQL
Sbjct: 241 VTERIGPVAYRLDLPDELSRIHDVFHVSMLRKYIADPSHVLESQPVQL 288

[Close]

BLAST of Cmc01g0024341 vs. NCBI nr
Match: TYK05214.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 459.9 bits (1182), Expect = 1.6e-125
Identity = 217/288 (75.35%), Postives = 252/288 (87.50%), Query Frame = 0


Query: 1   MDFLFGLPRTPSGYDRIWVIVDRLTKTACFTPVKVTFRLDKLAKLYLERIVSQYGVPVSI 60
           MDFLFGLPRT SG+D IWVIVDRLTKT  F P+K+T  LD+LA+LY+++IVSQYGVPVSI
Sbjct: 668 MDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSI 727

Query: 61  VSDRDSIFTSKFWPRLQNALGIKLHFSIAFHPQTDGQSERTIQTFEDMLRACVLQFKGSW 120
           VSDRD  FTSKFWP LQ A+G  L FS +FHPQTDGQSERTIQT EDMLRACVLQ KGSW
Sbjct: 728 VSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSW 787

Query: 121 DSQLPLVEFAYNNSYHSSIEMAPYEALYGRRCRTSVCWDEVGERKLMGLELVRSTTENVK 180
           D+ LPL+EFAYNN+Y SSI MAPYEALYGR CRT VCW+EVGERKL+G ELV+ TT N+K
Sbjct: 788 DTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIK 847

Query: 181 VIKEKLKMAQDRQKHYADKQRKDLEFEVGDNVFLKLSPWKGVLRFRRKGKLSPRYIGLYE 240
           +I+E L+ AQDRQK YADK+R++LEF+VGD VFLKLSPW+GV+RF RKGKLSPRYIG Y+
Sbjct: 848 LIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQ 907

Query: 241 IIERIGPVAYRLAPPMELSRIHDVFHVSMLRKYVPDPTHILEYQPVQL 289
           I ER+GP AYRL  P+EL+RIHDVFHVSMLRKY+PDP+H+L+ QPV+L
Sbjct: 908 ITERVGPAAYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVEL 955

[Close]

BLAST of Cmc01g0024341 vs. NCBI nr
Match: KAA0053246.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 459.9 bits (1182), Expect = 1.6e-125
Identity = 217/288 (75.35%), Postives = 252/288 (87.50%), Query Frame = 0


Query: 1   MDFLFGLPRTPSGYDRIWVIVDRLTKTACFTPVKVTFRLDKLAKLYLERIVSQYGVPVSI 60
           MDFLFGLPRT SG+D IWVIVDRLTKT  F P+K+T  LD+LA+LY+++IVSQYGVPVSI
Sbjct: 273 MDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSI 332

Query: 61  VSDRDSIFTSKFWPRLQNALGIKLHFSIAFHPQTDGQSERTIQTFEDMLRACVLQFKGSW 120
           VSDRD  FTSKFWP LQ A+G  L FS +FHPQTDGQSERTIQT EDMLRACVLQ KGSW
Sbjct: 333 VSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSW 392

Query: 121 DSQLPLVEFAYNNSYHSSIEMAPYEALYGRRCRTSVCWDEVGERKLMGLELVRSTTENVK 180
           D+ LPL+EFAYNN+Y SSI MAPYEALYGR CRT VCW+EVGERKL+G ELV+ TT N+K
Sbjct: 393 DTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIK 452

Query: 181 VIKEKLKMAQDRQKHYADKQRKDLEFEVGDNVFLKLSPWKGVLRFRRKGKLSPRYIGLYE 240
           +I+E L+ AQDRQK YADK+R++LEF+VGD VFLKLSPW+GV+RF RKGKLSPRYIG Y+
Sbjct: 453 LIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQ 512

Query: 241 IIERIGPVAYRLAPPMELSRIHDVFHVSMLRKYVPDPTHILEYQPVQL 289
           I ER+GP AYRL  P+EL+RIHDVFHVSMLRKY+PDP+H+L+ QPV+L
Sbjct: 513 ITERVGPAAYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVEL 560

[Close]

BLAST of Cmc01g0024341 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 9.3e-36
Identity = 88/275 (32.00%), Postives = 150/275 (54.55%), Query Frame = 0


Query: 1    MDFLFGLPRTPSGYDRIWVIVDRLTKTACFTPVKVTFRLDKLAKLYLERIVSQYGVPVSI 60
            MDF+  LP + SGY+ ++V+VDR +K A   P   +   ++ A+++ +R+++ +G P  I
Sbjct: 989  MDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEI 1048

Query: 61   VSDRDSIFTSKFWPRLQNALGIKLHFSIAFHPQTDGQSERTIQTFEDMLRACVLQFKGSW 120
            ++D D IFTS+ W    +     + FS+ + PQTDGQ+ERT QT E +LR        +W
Sbjct: 1049 IADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTW 1108

Query: 121  DSQLPLVEFAYNNSYHSSIEMAPYEALYGRRCRTSVCWDEVGERKLMGLELVRSTTENVK 180
               + LV+ +YNN+ HS+ +M P+E ++  R   ++   E+        E  + T +  +
Sbjct: 1109 VDHISLVQQSYNNAIHSATQMTPFEIVH--RYSPALSPLELPSFSDKTDENSQETIQVFQ 1168

Query: 181  VIKEKLKMAQDRQKHYADKQRKDL-EFEVGDNVFLKLSPWKGVLRFRRKGKLSPRYIGLY 240
             +KE L     + K Y D + +++ EF+ GD V +K +   G L   +  KL+P + G +
Sbjct: 1169 TVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTK-TGFL--HKSNKLAPSFAGPF 1228

Query: 241  EIIERIGPVAYRLAPPMELSRI-HDVFHVSMLRKY 274
             ++++ GP  Y L  P  +  +    FHVS L KY
Sbjct: 1229 YVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of Cmc01g0024341 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 9.3e-36
Identity = 88/275 (32.00%), Postives = 150/275 (54.55%), Query Frame = 0


Query: 1    MDFLFGLPRTPSGYDRIWVIVDRLTKTACFTPVKVTFRLDKLAKLYLERIVSQYGVPVSI 60
            MDF+  LP + SGY+ ++V+VDR +K A   P   +   ++ A+++ +R+++ +G P  I
Sbjct: 989  MDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEI 1048

Query: 61   VSDRDSIFTSKFWPRLQNALGIKLHFSIAFHPQTDGQSERTIQTFEDMLRACVLQFKGSW 120
            ++D D IFTS+ W    +     + FS+ + PQTDGQ+ERT QT E +LR        +W
Sbjct: 1049 IADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTW 1108

Query: 121  DSQLPLVEFAYNNSYHSSIEMAPYEALYGRRCRTSVCWDEVGERKLMGLELVRSTTENVK 180
               + LV+ +YNN+ HS+ +M P+E ++  R   ++   E+        E  + T +  +
Sbjct: 1109 VDHISLVQQSYNNAIHSATQMTPFEIVH--RYSPALSPLELPSFSDKTDENSQETIQVFQ 1168

Query: 181  VIKEKLKMAQDRQKHYADKQRKDL-EFEVGDNVFLKLSPWKGVLRFRRKGKLSPRYIGLY 240
             +KE L     + K Y D + +++ EF+ GD V +K +   G L   +  KL+P + G +
Sbjct: 1169 TVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTK-TGFL--HKSNKLAPSFAGPF 1228

Query: 241  EIIERIGPVAYRLAPPMELSRI-HDVFHVSMLRKY 274
             ++++ GP  Y L  P  +  +    FHVS L KY
Sbjct: 1229 YVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of Cmc01g0024341 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 9.3e-36
Identity = 88/275 (32.00%), Postives = 150/275 (54.55%), Query Frame = 0


Query: 1    MDFLFGLPRTPSGYDRIWVIVDRLTKTACFTPVKVTFRLDKLAKLYLERIVSQYGVPVSI 60
            MDF+  LP + SGY+ ++V+VDR +K A   P   +   ++ A+++ +R+++ +G P  I
Sbjct: 989  MDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEI 1048

Query: 61   VSDRDSIFTSKFWPRLQNALGIKLHFSIAFHPQTDGQSERTIQTFEDMLRACVLQFKGSW 120
            ++D D IFTS+ W    +     + FS+ + PQTDGQ+ERT QT E +LR        +W
Sbjct: 1049 IADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTW 1108

Query: 121  DSQLPLVEFAYNNSYHSSIEMAPYEALYGRRCRTSVCWDEVGERKLMGLELVRSTTENVK 180
               + LV+ +YNN+ HS+ +M P+E ++  R   ++   E+        E  + T +  +
Sbjct: 1109 VDHISLVQQSYNNAIHSATQMTPFEIVH--RYSPALSPLELPSFSDKTDENSQETIQVFQ 1168

Query: 181  VIKEKLKMAQDRQKHYADKQRKDL-EFEVGDNVFLKLSPWKGVLRFRRKGKLSPRYIGLY 240
             +KE L     + K Y D + +++ EF+ GD V +K +   G L   +  KL+P + G +
Sbjct: 1169 TVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTK-TGFL--HKSNKLAPSFAGPF 1228

Query: 241  EIIERIGPVAYRLAPPMELSRI-HDVFHVSMLRKY 274
             ++++ GP  Y L  P  +  +    FHVS L KY
Sbjct: 1229 YVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of Cmc01g0024341 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 9.3e-36
Identity = 88/275 (32.00%), Postives = 150/275 (54.55%), Query Frame = 0


Query: 1    MDFLFGLPRTPSGYDRIWVIVDRLTKTACFTPVKVTFRLDKLAKLYLERIVSQYGVPVSI 60
            MDF+  LP + SGY+ ++V+VDR +K A   P   +   ++ A+++ +R+++ +G P  I
Sbjct: 989  MDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEI 1048

Query: 61   VSDRDSIFTSKFWPRLQNALGIKLHFSIAFHPQTDGQSERTIQTFEDMLRACVLQFKGSW 120
            ++D D IFTS+ W    +     + FS+ + PQTDGQ+ERT QT E +LR        +W
Sbjct: 1049 IADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTW 1108

Query: 121  DSQLPLVEFAYNNSYHSSIEMAPYEALYGRRCRTSVCWDEVGERKLMGLELVRSTTENVK 180
               + LV+ +YNN+ HS+ +M P+E ++  R   ++   E+        E  + T +  +
Sbjct: 1109 VDHISLVQQSYNNAIHSATQMTPFEIVH--RYSPALSPLELPSFSDKTDENSQETIQVFQ 1168

Query: 181  VIKEKLKMAQDRQKHYADKQRKDL-EFEVGDNVFLKLSPWKGVLRFRRKGKLSPRYIGLY 240
             +KE L     + K Y D + +++ EF+ GD V +K +   G L   +  KL+P + G +
Sbjct: 1169 TVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTK-TGFL--HKSNKLAPSFAGPF 1228

Query: 241  EIIERIGPVAYRLAPPMELSRI-HDVFHVSMLRKY 274
             ++++ GP  Y L  P  +  +    FHVS L KY
Sbjct: 1229 YVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of Cmc01g0024341 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 9.3e-36
Identity = 88/275 (32.00%), Postives = 150/275 (54.55%), Query Frame = 0


Query: 1    MDFLFGLPRTPSGYDRIWVIVDRLTKTACFTPVKVTFRLDKLAKLYLERIVSQYGVPVSI 60
            MDF+  LP + SGY+ ++V+VDR +K A   P   +   ++ A+++ +R+++ +G P  I
Sbjct: 989  MDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEI 1048

Query: 61   VSDRDSIFTSKFWPRLQNALGIKLHFSIAFHPQTDGQSERTIQTFEDMLRACVLQFKGSW 120
            ++D D IFTS+ W    +     + FS+ + PQTDGQ+ERT QT E +LR        +W
Sbjct: 1049 IADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTW 1108

Query: 121  DSQLPLVEFAYNNSYHSSIEMAPYEALYGRRCRTSVCWDEVGERKLMGLELVRSTTENVK 180
               + LV+ +YNN+ HS+ +M P+E ++  R   ++   E+        E  + T +  +
Sbjct: 1109 VDHISLVQQSYNNAIHSATQMTPFEIVH--RYSPALSPLELPSFSDKTDENSQETIQVFQ 1168

Query: 181  VIKEKLKMAQDRQKHYADKQRKDL-EFEVGDNVFLKLSPWKGVLRFRRKGKLSPRYIGLY 240
             +KE L     + K Y D + +++ EF+ GD V +K +   G L   +  KL+P + G +
Sbjct: 1169 TVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTK-TGFL--HKSNKLAPSFAGPF 1228

Query: 241  EIIERIGPVAYRLAPPMELSRI-HDVFHVSMLRKY 274
             ++++ GP  Y L  P  +  +    FHVS L KY
Sbjct: 1229 YVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of Cmc01g0024341 vs. ExPASy TrEMBL
Match: A0A5A7SLT2 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold343G00540 PE=4 SV=1)

HSP 1 Score: 567.0 bits (1460), Expect = 4.5e-158
Identity = 277/288 (96.18%), Postives = 281/288 (97.57%), Query Frame = 0


Query: 1    MDFLFGLPRTPSGYDRIWVIVDRLTKTACFTPVKVTFRLDKLAKLYLERIVSQYGVPVSI 60
            MDFLFGLPRTPSGYD IWVIVDRLTKTACFTPVKVTF LDKLAKLYL+RIVSQYGVPVSI
Sbjct: 838  MDFLFGLPRTPSGYDGIWVIVDRLTKTACFTPVKVTFTLDKLAKLYLDRIVSQYGVPVSI 897

Query: 61   VSDRDSIFTSKFWPRLQNALGIKLHFSIAFHPQTDGQSERTIQTFEDMLRACVLQFKGSW 120
            VSDRDSIFTSKFWPRLQNALGIKLHFS AFHPQTDGQSER+IQTFEDMLRACVLQFKGSW
Sbjct: 898  VSDRDSIFTSKFWPRLQNALGIKLHFSTAFHPQTDGQSERSIQTFEDMLRACVLQFKGSW 957

Query: 121  DSQLPLVEFAYNNSYHSSIEMAPYEALYGRRCRTSVCWDEVGERKLMGLELVRSTTENVK 180
            DSQLPLVEFAYNNSYHSSIEMAPYEALYGRRCRTSVCWDEVGERKLMGLELVRSTTENVK
Sbjct: 958  DSQLPLVEFAYNNSYHSSIEMAPYEALYGRRCRTSVCWDEVGERKLMGLELVRSTTENVK 1017

Query: 181  VIKEKLKMAQDRQKHYADKQRKDLEFEVGDNVFLKLSPWKGVLRFRRKGKLSPRYIGLYE 240
            VIKEKLKMAQD QK+YADK+RKDLEFEVGDNVFLK SPWKGVLRFR KGKLSPRYIGLYE
Sbjct: 1018 VIKEKLKMAQDLQKNYADKERKDLEFEVGDNVFLKFSPWKGVLRFRWKGKLSPRYIGLYE 1077

Query: 241  IIERIGPVAYRLAPPMELSRIHDVFHVSMLRKYVPDPTHILEYQPVQL 289
            IIERIGPVAYRLA PMELSRIHDVFHVSMLRKYVPDPTHILEYQPVQL
Sbjct: 1078 IIERIGPVAYRLALPMELSRIHDVFHVSMLRKYVPDPTHILEYQPVQL 1125

[Close]

BLAST of Cmc01g0024341 vs. ExPASy TrEMBL
Match: A0A5A7U2V7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00630 PE=4 SV=1)

HSP 1 Score: 459.9 bits (1182), Expect = 7.7e-126
Identity = 217/288 (75.35%), Postives = 252/288 (87.50%), Query Frame = 0


Query: 1    MDFLFGLPRTPSGYDRIWVIVDRLTKTACFTPVKVTFRLDKLAKLYLERIVSQYGVPVSI 60
            MDFLFGLPRT SG+D IWVIVDRLTKT  F P+K+T  LD+LA+LY+++IVSQYGVPVSI
Sbjct: 1203 MDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSI 1262

Query: 61   VSDRDSIFTSKFWPRLQNALGIKLHFSIAFHPQTDGQSERTIQTFEDMLRACVLQFKGSW 120
            VSDRD  FTSKFWP LQ A+G  L FS +FHPQTDGQSERTIQT EDMLRACVLQ KGSW
Sbjct: 1263 VSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSW 1322

Query: 121  DSQLPLVEFAYNNSYHSSIEMAPYEALYGRRCRTSVCWDEVGERKLMGLELVRSTTENVK 180
            D+ LPL+EFAYNN+Y SSI MAPYEALYGR CRT VCW+EVGERKL+G ELV+ TT N+K
Sbjct: 1323 DTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIK 1382

Query: 181  VIKEKLKMAQDRQKHYADKQRKDLEFEVGDNVFLKLSPWKGVLRFRRKGKLSPRYIGLYE 240
            +I+E L+ AQDRQK YADK+R++LEF+VGD VFLKLSPW+GV+RF RKGKLSPRYIG Y+
Sbjct: 1383 LIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQ 1442

Query: 241  IIERIGPVAYRLAPPMELSRIHDVFHVSMLRKYVPDPTHILEYQPVQL 289
            I ER+GP AYRL  P+EL+RIHDVFHVSMLRKY+PDP+H+L+ QPV+L
Sbjct: 1443 ITERVGPAAYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVEL 1490

[Close]

BLAST of Cmc01g0024341 vs. ExPASy TrEMBL
Match: A0A5D3BS67 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold509G00050 PE=4 SV=1)

HSP 1 Score: 459.9 bits (1182), Expect = 7.7e-126
Identity = 217/288 (75.35%), Postives = 252/288 (87.50%), Query Frame = 0


Query: 1    MDFLFGLPRTPSGYDRIWVIVDRLTKTACFTPVKVTFRLDKLAKLYLERIVSQYGVPVSI 60
            MDFLFGLPRT SG+D IWVIVDRLTKT  F P+K+T  LD+LA+LY+++IVSQYGVPVSI
Sbjct: 1241 MDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSI 1300

Query: 61   VSDRDSIFTSKFWPRLQNALGIKLHFSIAFHPQTDGQSERTIQTFEDMLRACVLQFKGSW 120
            VSDRD  FTSKFWP LQ A+G  L FS +FHPQTDGQSERTIQT EDMLRACVLQ KGSW
Sbjct: 1301 VSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSW 1360

Query: 121  DSQLPLVEFAYNNSYHSSIEMAPYEALYGRRCRTSVCWDEVGERKLMGLELVRSTTENVK 180
            D+ LPL+EFAYNN+Y SSI MAPYEALYGR CRT VCW+EVGERKL+G ELV+ TT N+K
Sbjct: 1361 DTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIK 1420

Query: 181  VIKEKLKMAQDRQKHYADKQRKDLEFEVGDNVFLKLSPWKGVLRFRRKGKLSPRYIGLYE 240
            +I+E L+ AQDRQK YADK+R++LEF+VGD VFLKLSPW+GV+RF RKGKLSPRYIG Y+
Sbjct: 1421 LIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQ 1480

Query: 241  IIERIGPVAYRLAPPMELSRIHDVFHVSMLRKYVPDPTHILEYQPVQL 289
            I ER+GP AYRL  P+EL+RIHDVFHVSMLRKY+PDP+H+L+ QPV+L
Sbjct: 1481 ITERVGPAAYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVEL 1528

[Close]

BLAST of Cmc01g0024341 vs. ExPASy TrEMBL
Match: A0A5D3BHI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold115G00450 PE=4 SV=1)

HSP 1 Score: 459.9 bits (1182), Expect = 7.7e-126
Identity = 217/288 (75.35%), Postives = 252/288 (87.50%), Query Frame = 0


Query: 1    MDFLFGLPRTPSGYDRIWVIVDRLTKTACFTPVKVTFRLDKLAKLYLERIVSQYGVPVSI 60
            MDFLFGLPRT SG+D IWVIVDRLTKT  F P+K+T  LD+LA+LY+++IVSQYGVPVSI
Sbjct: 1241 MDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSI 1300

Query: 61   VSDRDSIFTSKFWPRLQNALGIKLHFSIAFHPQTDGQSERTIQTFEDMLRACVLQFKGSW 120
            VSDRD  FTSKFWP LQ A+G  L FS +FHPQTDGQSERTIQT EDMLRACVLQ KGSW
Sbjct: 1301 VSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSW 1360

Query: 121  DSQLPLVEFAYNNSYHSSIEMAPYEALYGRRCRTSVCWDEVGERKLMGLELVRSTTENVK 180
            D+ LPL+EFAYNN+Y SSI MAPYEALYGR CRT VCW+EVGERKL+G ELV+ TT N+K
Sbjct: 1361 DTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIK 1420

Query: 181  VIKEKLKMAQDRQKHYADKQRKDLEFEVGDNVFLKLSPWKGVLRFRRKGKLSPRYIGLYE 240
            +I+E L+ AQDRQK YADK+R++LEF+VGD VFLKLSPW+GV+RF RKGKLSPRYIG Y+
Sbjct: 1421 LIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQ 1480

Query: 241  IIERIGPVAYRLAPPMELSRIHDVFHVSMLRKYVPDPTHILEYQPVQL 289
            I ER+GP AYRL  P+EL+RIHDVFHVSMLRKY+PDP+H+L+ QPV+L
Sbjct: 1481 ITERVGPAAYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVEL 1528

[Close]

BLAST of Cmc01g0024341 vs. ExPASy TrEMBL
Match: A0A5A7T1Y5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G00980 PE=4 SV=1)

HSP 1 Score: 459.9 bits (1182), Expect = 7.7e-126
Identity = 217/288 (75.35%), Postives = 252/288 (87.50%), Query Frame = 0


Query: 1    MDFLFGLPRTPSGYDRIWVIVDRLTKTACFTPVKVTFRLDKLAKLYLERIVSQYGVPVSI 60
            MDFLFGLPRT SG+D IWVIVDRLTKT  F P+K+T  LD+LA+LY+++IVSQYGVPVSI
Sbjct: 1241 MDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSI 1300

Query: 61   VSDRDSIFTSKFWPRLQNALGIKLHFSIAFHPQTDGQSERTIQTFEDMLRACVLQFKGSW 120
            VSDRD  FTSKFWP LQ A+G  L FS +FHPQTDGQSERTIQT EDMLRACVLQ KGSW
Sbjct: 1301 VSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSW 1360

Query: 121  DSQLPLVEFAYNNSYHSSIEMAPYEALYGRRCRTSVCWDEVGERKLMGLELVRSTTENVK 180
            D+ LPL+EFAYNN+Y SSI MAPYEALYGR CRT VCW+EVGERKL+G ELV+ TT N+K
Sbjct: 1361 DTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIK 1420

Query: 181  VIKEKLKMAQDRQKHYADKQRKDLEFEVGDNVFLKLSPWKGVLRFRRKGKLSPRYIGLYE 240
            +I+E L+ AQDRQK YADK+R++LEF+VGD VFLKLSPW+GV+RF RKGKLSPRYIG Y+
Sbjct: 1421 LIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQ 1480

Query: 241  IIERIGPVAYRLAPPMELSRIHDVFHVSMLRKYVPDPTHILEYQPVQL 289
            I ER+GP AYRL  P+EL+RIHDVFHVSMLRKY+PDP+H+L+ QPV+L
Sbjct: 1481 ITERVGPAAYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVEL 1528

The following BLAST results are available for this feature:

BLAST of Cmc01g0024341 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0026229.1	9.3e-158	96.18	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK30722.1 D...	[more]
CAA2959003.1	2.6e-128	77.43	reverse transcriptase [Olea europaea subsp. europaea]	[more]
CAA3011866.1	1.7e-127	77.08	DNA RNA polymerases superfamily [Olea europaea subsp. europaea]	[more]
TYK05214.1	1.6e-125	75.35	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0053246.1	1.6e-125	75.35	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc01g0024341 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	9.3e-36	32.00	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	9.3e-36	32.00	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	9.3e-36	32.00	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	9.3e-36	32.00	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	9.3e-36	32.00	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc01g0024341 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SLT2	4.5e-158	96.18	DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5A7U2V7	7.7e-126	75.35	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37...	[more]
A0A5D3BS67	7.7e-126	75.35	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold50...	[more]
A0A5D3BHI1	7.7e-126	75.35	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A5A7T1Y5	7.7e-126	75.35	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold43...	[more]

BLAST of Cmc01g0024341 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 172..192
None	No IPR available	PANTHER	PTHR46148:SF18	IPP TRANSFERASE	coord: 106..282
None	No IPR available	PANTHER	PTHR46148	FAMILY NOT NAMED	coord: 106..282
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 1..198 e-value: 2.3E-43 score: 149.8
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 1..151 score: 19.159683
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 1..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc01g0024341.1	Cmc01g0024341.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding